Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0012943

Physical Location & Seq

Genomic Coordinates Reverse (-)

43150601 .. 43155530

Gene Structure 4930 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG226800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGTCTCGAGGCAAGGATGGTACGGTTTTGTTGATTGATGTTGGCCCGTCGATGCATAAAGCTCTTCCGGAGATAGAGAAGCTTTGCTCTATGCTGGTGGAGAAGAAGCTCATTTACAGCAAAAGTGATGAAGTAGGAGTTGTTTTGTTCGGCACAGAAGGCACTGAAAATGAGCTAACAAGGGAAGTCGGTGGATATGATCATATAACGGTTTTACAAAATATCAAAGTAGTTGATGAACATCTTATTCAGGCTGTGGAACAACTCCCACGAGGAACTCATAATGGTGATTTTCTTGATGCTGTAATTGTTGGGATGGATATGCTGATAAAGAAATATGGAGAAACAAACAAAGGAAAAAAACGTCTTTGTCTATTTACGAATGCACACTTCCCCACTAAAGCTCCACAAGATGGAACTAAAGAAGATCAAGTTATCACCATTGCCAGACATATGAATACGCAAGGCATGAGATTGGAAAGTATAGTCATAAGAGGAGGGCTTACCGGGGAAGCAAAGAAAAGTATAATGGATGAGAATGATCATCTATTGGATATATTCTCAAAGAGAACATGTGCAAAGTTGGTACATGTTGAGACTCCAACCTCATTGCTAGGTGCTCTTAAAACTCGAAAAGTTTCTCCTGTTACAATATTCAGGGGTGATCTTGAGCTGAGCCCCAAAATGAAGATTAAGGTATGGGTTTACAAGAAAACATCCGAAGACAAGTTTCCCACTCTGAAGAAATATTCTGATAAAGCCGCTCCAACAGATAAATTTGCGACACATGAAGTCAAGGTGGATTTTGAGTATAAGAGTGCTGAAGATCTGAGTAAAGTTGTACCTCCAGAACAGAGGATTAAAGGTTATCGTTATGGACCTCAAGTAATTCCCATATCATCTGCTGAATGGGATGCTGTCAAGTTCAAACCAGAAAAAAGTGTGAAACTTCTGGGATTTTCTGATGCTCAAAATATAATGCGACACTATTACATGAAAGATGTCAACGTTTTCATTCCTGAACCGGGTAATACAAGGGCCATTCTTGCTGTTTCGGCCTTGGCACGAGCAATGAAAGATAAGAATAAGGTGGCAATTGTGCGCTGTGTTTGGAGACAAGGACAAGCAAGTGTTATTGTGGGGGCCTTGACACCTAATGTGTCTGACAATGATAATATTCCTGATTCGTTTTACTTCAACGTACTCCCTTTTTCTGAAGATGTTCGAGAATTTCAATTCCCATCTTTCAATAATTTCCCAGCAGCATGGCAACCAAGTGAACAGCAGCAAGAGGCTGCTGATGATTTTGTGAGGATGTTTGATCTTGCACCATCTGGGAAACAGGAGGTTCTGCCGCCTGACCTAACACCAAATCCTGTTCTTGAGCGGTTTTTTCGTCATCTTGAATTAAAGTCAAGGGACCCAGATGCAGCTGTACCTCCAATTGATGAAACTCTCAGGAAGATTAGTGAACCAGATAAGGAGCTGATTGCTGAAAACAAGTCTGTTATTGATGCATTCCGTAGTCGTTTTGAACTCAAAGAGAACCCAAAGGTCATCAGTACTCATCACTCATTATCTGGTTTAGCTGTACCTCTGCAAGCAGTTTATGTTTTTATTATACTTTCTCTTCCATTTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000723 GO:0000726 GO:0000781 GO:0000784 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006303 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0015074 GO:0016043 GO:0031974 GO:0031981 GO:0032200 GO:0033554 GO:0034641 GO:0042162 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0060249 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098687 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03450 map03450

Pfam Domains

Protein Families

Ku Ku_C Ku_N Ku_PK_bind

Protein Analysis

547

Amino Acids

61.53

Weight (kDa)

7.22

Isoelectric Point (pI)

35.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ku_N	PF03731	8 - 147	1.3e-15	Ku70/Ku80 N-terminal alpha/beta domain
Ku	PF02735	227 - 431	5.2e-44	Ku70/Ku80 beta-barrel domain
Ku_C	PF03730	452 - 516	3.2e-06	Ku70/Ku80 C-terminal arm

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48050 AT1G48050 AT1G48050
fragaria_vesca	FvH4_7g11900 FvH4_7g11900
malus_domestica	MD07G1121000.v1.1
prunus_persica	Prupe.2G145600_v2.0.a1
pyrus_communis	pycom07g11020
rosa_chinensis	RchiOBHm_Chr1g0350581
rosa_laevigata	RLG00000028472
rosa_multiflora	Rmu_sc0009041.1_g000003
rosa_roxburghii	Rroxscaffold_4G00304720
rosa_rugosa	Rorug01G0212300
rosa_samantha	Rh1AG226800 Rh1BG195500 Rh1CG211600 Rh1DG223500
rosa_wichuraiana	Rw1G019600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	413
AccBSI	CCGCTC	2 cut(s)	764, 1387
AccIII	TCCGGA	1 cut(s)	67
AciI	CCGC	3 cut(s)	762, 1355, 1387
AclI	AACGTT	1 cut(s)	1008
AcsI	RAATTY	2 cut(s)	776, 1229
AcuI	CTGAAG	3 cut(s)	761, 843, 1236
AfaI	GTAC	7 cut(s)	22, 588, 843, 1203, 1437, 1564, 1593
AfiI	CCNNNNNNNGG	2 cut(s)	413, 1025
AflIII	ACRYGT	2 cut(s)	572, 589
AgsI	TTSAA	6 cut(s)	928, 1198, 1235, 1249, 1406, 1535
AluBI	AGCT	9 cut(s)	62, 82, 109, 175, 404, 673, 1433, 1486, 1589
AluI	AGCT	9 cut(s)	62, 82, 109, 175, 404, 673, 1433, 1486, 1589
Alw21I	GWGCWC	1 cut(s)	622
Alw26I	GTCTC	3 cut(s)	9, 590, 1108
Ama87I	CYCGRG	1 cut(s)	6
Aor13HI	TCCGGA	1 cut(s)	67
AoxI	GGCC	4 cut(s)	43, 1038, 1056, 1143
ApeKI	GCWGC	4 cut(s)	1262, 1285, 1295, 1430
ApoI	RAATTY	2 cut(s)	776, 1229
Asp700I	GAANNNNTTC	2 cut(s)	637, 1221
AspLEI	GCGC	1 cut(s)	1104
AspS9I	GGNCC	5 cut(s)	44, 878, 1038, 1143, 1420
AsuC2I	CCSGG	2 cut(s)	508, 1026
AsuHPI	GGTGA	3 cut(s)	299, 430, 674
AvaI	CYCGRG	1 cut(s)	6
AvaII	GGWCC	2 cut(s)	878, 1420
BanII	GRGCYC	1 cut(s)	680
BarI	GAAGNNNNNNTAC	2 cut(s)	98, 130
BauI	CACGAG	2 cut(s)	270, 1065
BbsI	GAAGAC	1 cut(s)	729
Bbv12I	GWGCWC	1 cut(s)	622
BbvI	GCAGC	4 cut(s)	1274, 1282, 1297, 1442
BccI	CCATC	5 cut(s)	11, 310, 407, 1249, 1339
BclI	TGATCA	2 cut(s)	199, 541
BcnI	CCSGG	2 cut(s)	508, 1026
BcoDI	GTCTC	3 cut(s)	9, 590, 1108
BfaI	CTAG	1 cut(s)	614
BglII	AGATCT	1 cut(s)	826
BisI	GCNGC	6 cut(s)	762, 1263, 1286, 1296, 1355, 1431
BlpI	GCTNAGC	1 cut(s)	674
BlsI	GCNGC	6 cut(s)	763, 1264, 1287, 1297, 1356, 1432
BmcAI	AGTACT	1 cut(s)	1564
Bme1390I	CCNGG	2 cut(s)	508, 1026
Bme18I	GGWCC	2 cut(s)	878, 1420
BmeT110I	CYCGRG	1 cut(s)	6
BmgT120I	GGNCC	5 cut(s)	44, 878, 1038, 1143, 1420
BmiI	GGNNCC	3 cut(s)	1144, 1421, 1422
BmrFI	CCNGG	2 cut(s)	508, 1026
BmsI	GCATC	6 cut(s)	42, 289, 904, 955, 1417, 1504
BpiI	GAAGAC	1 cut(s)	729
BpmI	CTGGAG	1 cut(s)	831
Bpu1102I	GCTNAGC	1 cut(s)	674
BpuEI	CTTGAG	3 cut(s)	689, 867, 1403
BpuMI	CCSGG	2 cut(s)	508, 1026
BsaBI	GATNNNNATC	1 cut(s)	240
BsaJI	CCNNGG	2 cut(s)	507, 1059
BsaWI	WCCGGW	1 cut(s)	67
BsaXI	ACNNNNNCTCC	2 cut(s)	388, 418
Bsc4I	CCNNNNNNNGG	2 cut(s)	413, 1025
Bse3DI	GCAATG	3 cut(s)	441, 608, 1077
Bse8I	GATNNNNATC	1 cut(s)	240
BseAI	TCCGGA	1 cut(s)	67
BseDI	CCNNGG	2 cut(s)	507, 1059
BseGI	GGATG	6 cut(s)	22, 321, 538, 716, 919, 1320
BseJI	GATNNNNATC	1 cut(s)	240
BseLI	CCNNNNNNNGG	2 cut(s)	413, 1025
BseMI	GCAATG	3 cut(s)	441, 608, 1077
BseMII	CTCAG	3 cut(s)	665, 821, 1471
BseRI	GAGGAG	1 cut(s)	510
BseXI	GCAGC	4 cut(s)	1274, 1282, 1297, 1442
BseYI	CCCAGC	1 cut(s)	1258
BshFI	GGCC	4 cut(s)	45, 1040, 1058, 1145
BsiHKAI	GWGCWC	1 cut(s)	622
BsiHKCI	CYCGRG	1 cut(s)	6
BsiSI	CCGG	3 cut(s)	68, 507, 1025
BslFI	GGGAC	1 cut(s)	1433
BslI	CCNNNNNNNGG	2 cut(s)	413, 1025
BsmAI	GTCTC	3 cut(s)	9, 590, 1108
BsmFI	GGGAC	1 cut(s)	1433
BsmI	GAATGC	2 cut(s)	388, 1517
BsnI	GGCC	4 cut(s)	45, 1040, 1058, 1145
BsoBI	CYCGRG	1 cut(s)	6
Bsp1286I	GDGCHC	2 cut(s)	622, 680
Bsp13I	TCCGGA	1 cut(s)	67
Bsp143I	GATC	6 cut(s)	199, 427, 541, 664, 826, 1321
Bsp1720I	GCTNAGC	1 cut(s)	674
BspACI	CCGC	3 cut(s)	762, 1355, 1387
BspANI	GGCC	4 cut(s)	45, 1040, 1058, 1145
BspCNI	CTCAG	3 cut(s)	666, 822, 1470
BspEI	TCCGGA	1 cut(s)	67
BspLI	GGNNCC	3 cut(s)	1144, 1421, 1422
BspQI	GCTCTTC	1 cut(s)	69
BsrBI	CCGCTC	2 cut(s)	764, 1387
BsrDI	GCAATG	3 cut(s)	441, 608, 1077
BssECI	CCNNGG	2 cut(s)	507, 1059
BssMI	GATC	6 cut(s)	199, 427, 541, 664, 826, 1321
BssSI	CACGAG	2 cut(s)	270, 1065
BssT1I	CCWWGG	1 cut(s)	1059
Bst2BI	CACGAG	2 cut(s)	270, 1065
Bst4CI	ACNGT	2 cut(s)	25, 211
Bst6I	CTCTTC	2 cut(s)	69, 1635
BstC8I	GCNNGC	1 cut(s)	1602
BstDEI	CTNAG	3 cut(s)	674, 830, 1457
BstF5I	GGATG	6 cut(s)	22, 321, 538, 716, 919, 1320
BstHHI	GCGC	1 cut(s)	1104
BstKTI	GATC	6 cut(s)	202, 430, 544, 667, 829, 1324
BstMAI	GTCTC	3 cut(s)	9, 590, 1108
BstMBI	GATC	6 cut(s)	199, 427, 541, 664, 826, 1321
BstMWI	GCNNNNNNNGC	3 cut(s)	159, 1046, 1055
BstNSI	RCATGY	2 cut(s)	576, 593
BstSCI	CCNGG	2 cut(s)	506, 1024
BstV1I	GCAGC	4 cut(s)	1274, 1282, 1297, 1442
BstV2I	GAAGAC	1 cut(s)	729
BstX2I	RGATCY	1 cut(s)	826
BstXI	CCANNNNNNTGG	1 cut(s)	1266
BstYI	RGATCY	1 cut(s)	826
BsuRI	GGCC	4 cut(s)	45, 1040, 1058, 1145
BtsCI	GGATG	6 cut(s)	22, 321, 538, 716, 919, 1320
BtsIMutI	CAGTG	1 cut(s)	162
Cac8I	GCNNGC	1 cut(s)	1602
CfoI	GCGC	1 cut(s)	1104
Cfr13I	GGNCC	5 cut(s)	44, 878, 1038, 1143, 1420
Csp6I	GTAC	7 cut(s)	21, 587, 842, 1202, 1436, 1563, 1592
CviAII	CATG	6 cut(s)	469, 573, 590, 788, 994, 1266
CviQI	GTAC	7 cut(s)	21, 587, 842, 1202, 1436, 1563, 1592
DdeI	CTNAG	3 cut(s)	674, 830, 1457
DpnI	GATC	6 cut(s)	201, 429, 543, 666, 828, 1323
DpnII	GATC	6 cut(s)	199, 427, 541, 664, 826, 1321
Eam1104I	CTCTTC	2 cut(s)	69, 1635
EarI	CTCTTC	2 cut(s)	69, 1635
Eco130I	CCWWGG	1 cut(s)	1059
Eco24I	GRGCYC	1 cut(s)	680
Eco47I	GGWCC	2 cut(s)	878, 1420
Eco57I	CTGAAG	3 cut(s)	761, 843, 1236
Eco88I	CYCGRG	1 cut(s)	6
EcoO109I	RGGNCCY	2 cut(s)	1143, 1420
EcoT14I	CCWWGG	1 cut(s)	1059
EcoT22I	ATGCAT	2 cut(s)	57, 1519
EcoT38I	GRGCYC	1 cut(s)	680
ErhI	CCWWGG	1 cut(s)	1059
FaeI	CATG	6 cut(s)	472, 576, 593, 791, 997, 1269
FaqI	GGGAC	1 cut(s)	1433
FatI	CATG	6 cut(s)	468, 572, 589, 787, 993, 1265
FauNDI	CATATG	1 cut(s)	453
FbaI	TGATCA	2 cut(s)	199, 541
Fnu4HI	GCNGC	6 cut(s)	762, 1263, 1286, 1296, 1355, 1431
FokI	GGATG	6 cut(s)	29, 328, 545, 703, 926, 1327
FriOI	GRGCYC	1 cut(s)	680
Fsp4HI	GCNGC	6 cut(s)	762, 1263, 1286, 1296, 1355, 1431
FspBI	CTAG	1 cut(s)	614
GlaI	GCGC	1 cut(s)	1103
GluI	GCNGC	6 cut(s)	762, 1263, 1286, 1296, 1355, 1431
GsaI	CCCAGC	1 cut(s)	1262
GsuI	CTGGAG	1 cut(s)	831
HaeIII	GGCC	4 cut(s)	45, 1040, 1058, 1145
HapII	CCGG	3 cut(s)	68, 507, 1025
HhaI	GCGC	1 cut(s)	1104
Hin1II	CATG	6 cut(s)	472, 576, 593, 791, 997, 1269
Hin6I	GCGC	1 cut(s)	1102
HinP1I	GCGC	1 cut(s)	1102
HincII	GTYRAC	1 cut(s)	1006
HindII	GTYRAC	1 cut(s)	1006
HindIII	AAGCTT	1 cut(s)	80
HinfI	GANTC	2 cut(s)	598, 1184
HpaII	CCGG	3 cut(s)	68, 507, 1025
HphI	GGTGA	3 cut(s)	299, 430, 674
Hpy166II	GTNNAC	4 cut(s)	706, 1006, 1280, 1472
Hpy188I	TCNGA	7 cut(s)	721, 741, 754, 831, 964, 1165, 1216
Hpy8I	GTNNAC	4 cut(s)	706, 1006, 1280, 1472
Hpy99I	CGWCG	1 cut(s)	52
HpyAV	CCTTC	1 cut(s)	152
HpyCH4III	ACNGT	2 cut(s)	25, 211
HpyCH4IV	ACGT	3 cut(s)	364, 1008, 1200
HpyCH4V	TGCA	7 cut(s)	55, 386, 578, 1328, 1430, 1517, 1600
HpyF10VI	GCNNNNNNNGC	3 cut(s)	159, 1046, 1055
HpyF3I	CTNAG	3 cut(s)	674, 830, 1457
HpySE526I	ACGT	3 cut(s)	364, 1008, 1200
Hsp92II	CATG	6 cut(s)	472, 576, 593, 791, 997, 1269
HspAI	GCGC	1 cut(s)	1102
KflI	GGGWCCC	1 cut(s)	1420
Kpn2I	TCCGGA	1 cut(s)	67
Ksp22I	TGATCA	2 cut(s)	199, 541
Kzo9I	GATC	6 cut(s)	199, 427, 541, 664, 826, 1321
LguI	GCTCTTC	1 cut(s)	69
LmnI	GCTCC	3 cut(s)	409, 769, 1483
Lsp1109I	GCAGC	4 cut(s)	1274, 1282, 1297, 1442
LweI	GCATC	6 cut(s)	42, 289, 904, 955, 1417, 1504
MaeI	CTAG	1 cut(s)	614
MaeII	ACGT	3 cut(s)	364, 1008, 1200
MaeIII	GTNAC	1 cut(s)	646
MalI	GATC	6 cut(s)	201, 429, 543, 666, 828, 1323
MbiI	CCGCTC	2 cut(s)	764, 1387
MboI	GATC	6 cut(s)	199, 427, 541, 664, 826, 1321
MfeI	CAATTG	2 cut(s)	1095, 1443
MflI	RGATCY	1 cut(s)	826
MhlI	GDGCHC	2 cut(s)	622, 680
MluCI	AATT	9 cut(s)	306, 776, 888, 1095, 1229, 1235, 1252, 1406, 1443
MlyI	GAGTC	1 cut(s)	592
MmeI	TCCRAC	2 cut(s)	626, 791
Mph1103I	ATGCAT	2 cut(s)	57, 1519
MroI	TCCGGA	1 cut(s)	67
MroXI	GAANNNNTTC	2 cut(s)	637, 1221
MseI	TTAA	4 cut(s)	624, 693, 861, 1409
MslI	CAYNNNNRTG	1 cut(s)	285
MspA1I	CMGCKG	1 cut(s)	1433
MspI	CCGG	3 cut(s)	68, 507, 1025
MspR9I	CCNGG	2 cut(s)	508, 1026
MunI	CAATTG	2 cut(s)	1095, 1443
Mva1269I	GAATGC	2 cut(s)	388, 1517
MwoI	GCNNNNNNNGC	3 cut(s)	159, 1046, 1055
NciI	CCSGG	2 cut(s)	508, 1026
NdeI	CATATG	1 cut(s)	453
NdeII	GATC	6 cut(s)	199, 427, 541, 664, 826, 1321
NlaIII	CATG	6 cut(s)	472, 576, 593, 791, 997, 1269
NlaIV	GGNNCC	3 cut(s)	1144, 1421, 1422
NsiI	ATGCAT	2 cut(s)	57, 1519
NspI	RCATGY	2 cut(s)	576, 593
PaeR7I	CTCGAG	1 cut(s)	6
PciI	ACATGT	2 cut(s)	572, 589
PciSI	GCTCTTC	1 cut(s)	69
PctI	GAATGC	2 cut(s)	388, 1517
PdmI	GAANNNNTTC	2 cut(s)	637, 1221
PfeI	GAWTC	1 cut(s)	1184
PflMI	CCANNNNNTGG	1 cut(s)	413
PkrI	GCNGC	6 cut(s)	763, 1264, 1287, 1297, 1356, 1432
PleI	GAGTC	1 cut(s)	592
PpsI	GAGTC	1 cut(s)	592
PpuMI	RGGWCCY	1 cut(s)	1420
PscI	ACATGT	2 cut(s)	572, 589
Psp1406I	AACGTT	1 cut(s)	1008
Psp5II	RGGWCCY	1 cut(s)	1420
PspFI	CCCAGC	1 cut(s)	1258
PspN4I	GGNNCC	3 cut(s)	1144, 1421, 1422
PspPI	GGNCC	5 cut(s)	44, 878, 1038, 1143, 1420
PspPPI	RGGWCCY	1 cut(s)	1420
PsuI	RGATCY	1 cut(s)	826
PvuII	CAGCTG	1 cut(s)	1433
RsaI	GTAC	7 cut(s)	22, 588, 843, 1203, 1437, 1564, 1593
RsaNI	GTAC	7 cut(s)	21, 587, 842, 1202, 1436, 1563, 1592
RseI	CAYNNNNRTG	1 cut(s)	285
SapI	GCTCTTC	1 cut(s)	69
SaqAI	TTAA	4 cut(s)	624, 693, 861, 1409
SatI	GCNGC	6 cut(s)	762, 1263, 1286, 1296, 1355, 1431
Sau3AI	GATC	6 cut(s)	199, 427, 541, 664, 826, 1321
Sau96I	GGNCC	5 cut(s)	44, 878, 1038, 1143, 1420
ScaI	AGTACT	1 cut(s)	1564
SchI	GAGTC	1 cut(s)	592
ScrFI	CCNGG	2 cut(s)	508, 1026
SduI	GDGCHC	2 cut(s)	622, 680
SfaNI	GCATC	6 cut(s)	42, 289, 904, 955, 1417, 1504
Sfr274I	CTCGAG	1 cut(s)	6
SinI	GGWCC	2 cut(s)	878, 1420
SlaI	CTCGAG	1 cut(s)	6
SmiMI	CAYNNNNRTG	1 cut(s)	285
SmlI	CTYRAG	4 cut(s)	6, 668, 882, 1382
SmoI	CTYRAG	4 cut(s)	6, 668, 882, 1382
Sse9I	AATT	9 cut(s)	306, 776, 888, 1095, 1229, 1235, 1252, 1406, 1443
SsiI	CCGC	3 cut(s)	762, 1355, 1387
SspI	AATATT	3 cut(s)	654, 749, 1177
SspMI	CTAG	1 cut(s)	614
StyD4I	CCNGG	2 cut(s)	506, 1024
StyI	CCWWGG	1 cut(s)	1059
TaaI	ACNGT	2 cut(s)	25, 211
TaiI	ACGT	3 cut(s)	367, 1011, 1203
TaqI	TCGA	4 cut(s)	7, 50, 631, 1225
TasI	AATT	9 cut(s)	306, 776, 888, 1095, 1229, 1235, 1252, 1406, 1443
TatI	WGTACW	1 cut(s)	1562
TauI	GCSGC	2 cut(s)	764, 1357
TfiI	GAWTC	1 cut(s)	1184
Tru1I	TTAA	4 cut(s)	624, 693, 861, 1409
Tru9I	TTAA	4 cut(s)	624, 693, 861, 1409
TscAI	CASTG	1 cut(s)	169
TseI	GCWGC	4 cut(s)	1262, 1285, 1295, 1430
TspDTI	ATGAA	9 cut(s)	144, 252, 470, 701, 804, 1003, 1010, 1088, 1464
TspGWI	ACGGA	1 cut(s)	1511
TspRI	CASTG	1 cut(s)	169
Van91I	CCANNNNNTGG	1 cut(s)	413
VpaK11BI	GGWCC	2 cut(s)	878, 1420
XapI	RAATTY	2 cut(s)	776, 1229
XceI	RCATGY	2 cut(s)	576, 593
XhoI	CTCGAG	1 cut(s)	6
XmnI	GAANNNNTTC	2 cut(s)	637, 1221
XspI	CTAG	1 cut(s)	614
ZrmI	AGTACT	1 cut(s)	1564
Zsp2I	ATGCAT	2 cut(s)	57, 1519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.