Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005829

Physical Location & Seq

Genomic Coordinates Reverse (-)

19999037 .. 20002016

Gene Structure 2980 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1137200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGACAATTCACCAAGTTATGATGAACAATATGATCTGGGTTACCAGCCTTCACCTTCTTCTGTGGATCAAACTGATCATTCGCTTGCGGAAACTTCAACAAGTGGTGATTCTTTTATGTACCGCCGGACAAATTCAGAGACCTCGGTTTTCTCTGAGTCTGTGGATGACAGCAGCTACTCTGGTGAAGCTTCTCCTTGGTTCTACCCAAATGTAAAATCCAACCAGGCGTCTCTTACCAGACTTGGAATGAAGCTGCATAACAAGAATGCCTCTGATGAAACACTTCAAGATGACGACGCAGTTGATTCAGAGCTTGAGATGATGAAAGAACGATTTGCAAAGCTCTTGTTGGGTGAAGACATGTCAGGAAGTGGGAAAGGTGTGTGCACCGCGGTCACAATATCAAATTCGATAACCAACCTCTACGCCACTGTGTTTGGACAAAACTTGAGGCTGGAGCCACTGAATCCTGAGAAGAAAGCCATGTGGAAGAGGGAGATGAACTGTCTTCTATCAGTTTGTGATTACATCGTAGAACTTATCCCCATATCACAAAACTTACAAGATGGGACAGAAGTGGAGTTCATGAAAAGCAGGCCAAGATCTGATCTTTATATCAACCTTCCAGCTTTGCAAAAGCTTGACGCAATGCTTATTGAAGTACTTGATAGTTTCCAGGATACCGAATTCTGGTATGCAGAAAAAGGGAGCATGTCATCCAATTCAACGCGTACAGGATCATTTAGAAGGGTGGTTGTTCAGCGGAATGAGGAGAAATGGTGGTTGCCGGTTCCATGTGTTCCTCCGGGAGGCCTCTCTGAGAAGGCAAGGAAACATTTGAAACACAAACGTGACAGTTCTAATCAAATCCACAAAGCAGCCATGGCAATCAATAGCAGTATTCTTGCTGAGATGGAAATCCCAGACTCATACATGTCAACTCTTCCAAAGAGTGGAAGAGCTTGTCTTGGAGACTCCATATACCGCTACATGTGCACCACAGACAAGTTCTCTCCAGACCACCTTCTGGACTGCCTCAACATAGCAACTGAACACGAAGCACTTGATCTTGCAGACAGGGTCGAAGCTTCGATGTACACGTGGAGACGTAAAGCGTGCATGAGCAACTCAAAATCTTCATGGACCATGGTAAAAGATCTAATGTCGGAAACAGACAGGAACGACAAGAATCATGTTTTGGCGGAGAGAGCCGAGTGTTTGCTGTTGTGTCTGAAGCAGAGATATCCTGAGCTCTCTCAGACATCCTTGGATACTTGCAAAATCCAATGCAATAAGGATGTGGGGCAATCAGTACTGGAGAGCTACTCGAGAGTGTTGGAGAGTTTGGCATTCAACATTGTTGCTTGGATTGACGATGTAATTTGTGTCGAGAGATCCGTGAGAAACCAAGACAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009505 GO:0009531 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009664 GO:0009814 GO:0009817 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016020 GO:0016043 GO:0016049 GO:0017016 GO:0017048 GO:0019899 GO:0021700 GO:0022622 GO:0030154 GO:0030312 GO:0031267 GO:0032501 GO:0032502 GO:0040007 GO:0043207 GO:0044424 GO:0044464 GO:0045087 GO:0045229 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051020 GO:0051704 GO:0051707 GO:0060560 GO:0065007 GO:0065009 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0098542 GO:0098772 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

474

Amino Acids

53.53

Weight (kDa)

5.06

Isoelectric Point (pI)

60.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRONE	PF03759	104 - 469	9.6e-178	PRONE (Plant-specific Rop nucleotide exchanger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005829)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01700 AT1G01700 AT1G01700 AT1G01700 AT1G01700 AT4G00460 AT4G00460 AT4G00460 AT4G00460
fragaria_vesca	FvH4_7g14260 FvH4_7g14260 FvH4_7g14260 FvH4_7g14260
malus_domestica	MD01G1060500.v1.1 MD07G1137200.v1.1
prunus_persica	Prupe.2G170400_v2.0.a1
pyrus_communis	pycom07g13500
rosa_chinensis	RchiOBHm_Chr1g0355251
rosa_laevigata	RLG00000028167
rosa_multiflora	Rmu_sc0003115.1_g000043
rosa_roxburghii	Rroxscaffold_4G00300560
rosa_rugosa	Rorug01G0245800 Rorug01G0245800
rosa_samantha	Rh1AG258200 Rh1BG227800 Rh1CG241900 Rh1DG255600
rosa_wichuraiana	Rw1G022790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	956, 1030
AccII	CGCG	2 cut(s)	395, 733
AciI	CCGC	7 cut(s)	89, 124, 393, 395, 766, 988, 1205
AclWI	GGATC	3 cut(s)	75, 748, 1392
AcsI	RAATTY	3 cut(s)	133, 409, 689
AcuI	CTGAAG	1 cut(s)	1256
AcvI	CACGTG	1 cut(s)	1104
AcyI	GRCGYC	1 cut(s)	230
AfaI	GTAC	5 cut(s)	122, 666, 736, 1100, 1317
AfiI	CCNNNNNNNGG	4 cut(s)	693, 812, 956, 1030
AflIII	ACRYGT	5 cut(s)	363, 731, 936, 993, 1101
AgsI	TTSAA	6 cut(s)	99, 290, 662, 729, 844, 1357
AjnI	CCWGG	2 cut(s)	225, 678
AjuI	GAANNNNNNNTTGG	2 cut(s)	1184, 1216
AleI	CACNNNNGTG	1 cut(s)	852
Alw21I	GWGCWC	3 cut(s)	392, 1001, 1257
Alw26I	GTCTC	4 cut(s)	134, 237, 969, 1102
Alw44I	GTGCAC	2 cut(s)	388, 997
AlwI	GGATC	3 cut(s)	75, 748, 1392
Ama87I	CYCGRG	1 cut(s)	1330
AoxI	GGCC	2 cut(s)	599, 814
ApaLI	GTGCAC	2 cut(s)	388, 997
ApeKI	GCWGC	3 cut(s)	174, 256, 881
ApoI	RAATTY	3 cut(s)	133, 409, 689
Asp700I	GAANNNNTTC	1 cut(s)	285
AspS9I	GGNCC	1 cut(s)	1146
AsuC2I	CCSGG	1 cut(s)	810
AsuHPI	GGTGA	5 cut(s)	3, 45, 119, 197, 368
AvaI	CYCGRG	1 cut(s)	1330
AvaII	GGWCC	1 cut(s)	1146
BaeGI	GKGCMC	2 cut(s)	392, 1001
BanII	GRGCYC	1 cut(s)	1257
BbrPI	CACGTG	1 cut(s)	1104
BbsI	GAAGAC	2 cut(s)	366, 503
Bbv12I	GWGCWC	3 cut(s)	392, 1001, 1257
BbvI	GCAGC	3 cut(s)	186, 243, 893
BccI	CCATC	2 cut(s)	563, 910
BciT130I	CCWGG	2 cut(s)	227, 680
BciVI	GTATCC	2 cut(s)	676, 1267
BclI	TGATCA	1 cut(s)	76
BcnI	CCSGG	1 cut(s)	810
BcoDI	GTCTC	4 cut(s)	134, 237, 969, 1102
BfuI	GTATCC	2 cut(s)	676, 1267
BglII	AGATCT	2 cut(s)	605, 1159
BisI	GCNGC	3 cut(s)	175, 257, 882
BlsI	GCNGC	3 cut(s)	176, 258, 883
BmcAI	AGTACT	2 cut(s)	666, 1317
Bme1390I	CCNGG	3 cut(s)	227, 680, 810
Bme18I	GGWCC	1 cut(s)	1146
BmeT110I	CYCGRG	1 cut(s)	1330
BmgT120I	GGNCC	1 cut(s)	1146
BmiI	GGNNCC	2 cut(s)	462, 795
BmrFI	CCNGG	3 cut(s)	227, 680, 810
BpiI	GAAGAC	2 cut(s)	366, 503
BplI	GAGNNNNNCTC	2 cut(s)	1313, 1345
BpmI	CTGGAG	3 cut(s)	479, 1002, 1340
Bpu10I	CCTNAGC	1 cut(s)	1251
BpuEI	CTTGAG	2 cut(s)	338, 472
BpuMI	CCSGG	1 cut(s)	810
BsaAI	YACGTR	1 cut(s)	1104
BsaBI	GATNNNNATC	1 cut(s)	920
BsaHI	GRCGYC	1 cut(s)	230
BsaI	GGTCTC	1 cut(s)	134
BsaJI	CCNNGG	6 cut(s)	144, 197, 393, 885, 1149, 1269
BsaXI	ACNNNNNCTCC	2 cut(s)	767, 797
Bsc4I	CCNNNNNNNGG	4 cut(s)	693, 812, 956, 1030
Bse118I	RCCGGY	1 cut(s)	790
Bse1I	ACTGG	1 cut(s)	1323
Bse3DI	GCAATG	1 cut(s)	657
Bse8I	GATNNNNATC	1 cut(s)	920
BseBI	CCWGG	2 cut(s)	227, 680
BseDI	CCNNGG	6 cut(s)	144, 197, 393, 885, 1149, 1269
BseGI	GGATG	4 cut(s)	172, 719, 1265, 1306
BseJI	GATNNNNATC	1 cut(s)	920
BseLI	CCNNNNNNNGG	4 cut(s)	693, 812, 956, 1030
BseMI	GCAATG	1 cut(s)	657
BseMII	CTCAG	6 cut(s)	147, 465, 813, 903, 1242, 1274
BseNI	ACTGG	1 cut(s)	1323
BseRI	GAGGAG	1 cut(s)	788
BseSI	GKGCMC	2 cut(s)	392, 1001
BseXI	GCAGC	3 cut(s)	186, 243, 893
Bsh1236I	CGCG	2 cut(s)	395, 733
BshFI	GGCC	2 cut(s)	601, 816
BsiHKAI	GWGCWC	3 cut(s)	392, 1001, 1257
BsiHKCI	CYCGRG	1 cut(s)	1330
BsiSI	CCGG	3 cut(s)	127, 791, 809
BslFI	GGGAC	1 cut(s)	586
BslI	CCNNNNNNNGG	4 cut(s)	693, 812, 956, 1030
BsmAI	GTCTC	4 cut(s)	134, 237, 969, 1102
BsmBI	CGTCTC	2 cut(s)	237, 1102
BsmFI	GGGAC	1 cut(s)	586
BsmI	GAATGC	2 cut(s)	274, 1352
BsnI	GGCC	2 cut(s)	601, 816
Bso31I	GGTCTC	1 cut(s)	134
BsoBI	CYCGRG	1 cut(s)	1330
Bsp1286I	GDGCHC	3 cut(s)	392, 1001, 1257
Bsp1407I	TGTACA	1 cut(s)	1098
Bsp143I	GATC	9 cut(s)	34, 67, 76, 605, 610, 740, 1069, 1159, 1397
Bsp19I	CCATGG	2 cut(s)	885, 1149
BspACI	CCGC	7 cut(s)	89, 124, 393, 395, 766, 988, 1205
BspANI	GGCC	2 cut(s)	601, 816
BspCNI	CTCAG	6 cut(s)	148, 466, 814, 904, 1243, 1273
BspFNI	CGCG	2 cut(s)	395, 733
BspHI	TCATGA	1 cut(s)	588
BspLI	GGNNCC	2 cut(s)	462, 795
BspPI	GGATC	3 cut(s)	75, 748, 1392
BspQI	GCTCTTC	1 cut(s)	955
BspTNI	GGTCTC	1 cut(s)	134
BsrDI	GCAATG	1 cut(s)	657
BsrFI	RCCGGY	1 cut(s)	790
BsrGI	TGTACA	1 cut(s)	1098
BsrI	ACTGG	1 cut(s)	1323
BssAI	RCCGGY	1 cut(s)	790
BssECI	CCNNGG	6 cut(s)	144, 197, 393, 885, 1149, 1269
BssMI	GATC	9 cut(s)	34, 67, 76, 605, 610, 740, 1069, 1159, 1397
BssNI	GRCGYC	1 cut(s)	230
BssT1I	CCWWGG	4 cut(s)	197, 885, 1149, 1269
Bst2UI	CCWGG	2 cut(s)	227, 680
Bst4CI	ACNGT	3 cut(s)	436, 509, 860
Bst6I	CTCTTC	3 cut(s)	488, 951, 955
BstACI	GRCGYC	1 cut(s)	230
BstAUI	TGTACA	1 cut(s)	1098
BstBAI	YACGTR	1 cut(s)	1104
BstC8I	GCNNGC	3 cut(s)	87, 599, 1120
BstDEI	CTNAG	6 cut(s)	156, 474, 822, 912, 1251, 1260
BstDSI	CCRYGG	3 cut(s)	393, 885, 1149
BstEII	GGTNACC	1 cut(s)	41
BstENI	CCTNNNNNAGG	1 cut(s)	810
BstF5I	GGATG	4 cut(s)	172, 719, 1265, 1306
BstFNI	CGCG	2 cut(s)	395, 733
BstKTI	GATC	9 cut(s)	37, 70, 79, 608, 613, 743, 1072, 1162, 1400
BstMAI	GTCTC	4 cut(s)	134, 237, 969, 1102
BstMBI	GATC	9 cut(s)	34, 67, 76, 605, 610, 740, 1069, 1159, 1397
BstMWI	GCNNNNNNNGC	3 cut(s)	887, 996, 1211
BstNI	CCWGG	2 cut(s)	227, 680
BstNSI	RCATGY	4 cut(s)	367, 718, 940, 997
BstPI	GGTNACC	1 cut(s)	41
BstSCI	CCNGG	3 cut(s)	225, 678, 808
BstSLI	GKGCMC	2 cut(s)	392, 1001
BstUI	CGCG	2 cut(s)	395, 733
BstV1I	GCAGC	3 cut(s)	186, 243, 893
BstV2I	GAAGAC	2 cut(s)	366, 503
BstX2I	RGATCY	3 cut(s)	605, 1159, 1397
BstYI	RGATCY	3 cut(s)	605, 1159, 1397
BsuI	GTATCC	2 cut(s)	676, 1267
BsuRI	GGCC	2 cut(s)	601, 816
BtgI	CCRYGG	3 cut(s)	393, 885, 1149
BtsCI	GGATG	4 cut(s)	172, 719, 1265, 1306
BtsIMutI	CAGTG	2 cut(s)	432, 464
Cac8I	GCNNGC	3 cut(s)	87, 599, 1120
CciI	TCATGA	1 cut(s)	588
Cfr10I	RCCGGY	1 cut(s)	790
Cfr13I	GGNCC	1 cut(s)	1146
Cfr42I	CCGCGG	1 cut(s)	396
CseI	GACGC	3 cut(s)	219, 308, 656
Csp6I	GTAC	5 cut(s)	121, 665, 735, 1099, 1316
CspCI	CAANNNNNGTGG	2 cut(s)	421, 456
CviQI	GTAC	5 cut(s)	121, 665, 735, 1099, 1316
DdeI	CTNAG	6 cut(s)	156, 474, 822, 912, 1251, 1260
DpnI	GATC	9 cut(s)	36, 69, 78, 607, 612, 742, 1071, 1161, 1399
DpnII	GATC	9 cut(s)	34, 67, 76, 605, 610, 740, 1069, 1159, 1397
Eam1104I	CTCTTC	3 cut(s)	488, 951, 955
EarI	CTCTTC	3 cut(s)	488, 951, 955
EciI	GGCGGA	1 cut(s)	1220
Ecl136II	GAGCTC	1 cut(s)	1255
Eco130I	CCWWGG	4 cut(s)	197, 885, 1149, 1269
Eco147I	AGGCCT	1 cut(s)	816
Eco24I	GRGCYC	1 cut(s)	1257
Eco31I	GGTCTC	1 cut(s)	134
Eco32I	GATATC	1 cut(s)	1247
Eco47I	GGWCC	1 cut(s)	1146
Eco53kI	GAGCTC	1 cut(s)	1255
Eco57I	CTGAAG	1 cut(s)	1256
Eco72I	CACGTG	1 cut(s)	1104
Eco88I	CYCGRG	1 cut(s)	1330
Eco91I	GGTNACC	1 cut(s)	41
EcoICRI	GAGCTC	1 cut(s)	1255
EcoNI	CCTNNNNNAGG	1 cut(s)	810
EcoO65I	GGTNACC	1 cut(s)	41
EcoRI	GAATTC	1 cut(s)	689
EcoRII	CCWGG	2 cut(s)	225, 678
EcoRV	GATATC	1 cut(s)	1247
EcoT14I	CCWWGG	4 cut(s)	197, 885, 1149, 1269
EcoT38I	GRGCYC	1 cut(s)	1257
ErhI	CCWWGG	4 cut(s)	197, 885, 1149, 1269
Esp3I	CGTCTC	2 cut(s)	237, 1102
FaqI	GGGAC	1 cut(s)	586
FbaI	TGATCA	1 cut(s)	76
Fnu4HI	GCNGC	3 cut(s)	175, 257, 882
FokI	GGATG	4 cut(s)	179, 706, 1252, 1313
FriOI	GRGCYC	1 cut(s)	1257
Fsp4HI	GCNGC	3 cut(s)	175, 257, 882
GluI	GCNGC	3 cut(s)	175, 257, 882
GsuI	CTGGAG	3 cut(s)	479, 1002, 1340
HaeIII	GGCC	2 cut(s)	601, 816
HapII	CCGG	3 cut(s)	127, 791, 809
HgaI	GACGC	3 cut(s)	219, 308, 656
Hin1I	GRCGYC	1 cut(s)	230
HincII	GTYRAC	1 cut(s)	942
HindII	GTYRAC	1 cut(s)	942
HindIII	AAGCTT	3 cut(s)	189, 641, 1089
HinfI	GANTC	7 cut(s)	110, 158, 308, 469, 929, 977, 1192
HpaII	CCGG	3 cut(s)	127, 791, 809
HphI	GGTGA	5 cut(s)	3, 45, 119, 197, 368
Hpy166II	GTNNAC	4 cut(s)	390, 942, 999, 1101
Hpy188I	TCNGA	9 cut(s)	139, 157, 277, 313, 610, 823, 1171, 1236, 1263
Hpy188III	TCNNGA	9 cut(s)	290, 369, 473, 589, 1019, 1031, 1250, 1332, 1393
Hpy8I	GTNNAC	4 cut(s)	390, 942, 999, 1101
Hpy99I	CGWCG	1 cut(s)	302
HpyAV	CCTTC	6 cut(s)	60, 66, 635, 744, 820, 1037
HpyCH4III	ACNGT	3 cut(s)	436, 509, 860
HpyCH4IV	ACGT	3 cut(s)	853, 1103, 1111
HpyF10VI	GCNNNNNNNGC	3 cut(s)	887, 996, 1211
HpyF3I	CTNAG	6 cut(s)	156, 474, 822, 912, 1251, 1260
HpySE526I	ACGT	3 cut(s)	853, 1103, 1111
Hsp92I	GRCGYC	1 cut(s)	230
Ksp22I	TGATCA	1 cut(s)	76
KspI	CCGCGG	1 cut(s)	396
Kzo9I	GATC	9 cut(s)	34, 67, 76, 605, 610, 740, 1069, 1159, 1397
LguI	GCTCTTC	1 cut(s)	955
LmnI	GCTCC	2 cut(s)	460, 711
Lsp1109I	GCAGC	3 cut(s)	186, 243, 893
MaeII	ACGT	3 cut(s)	853, 1103, 1111
MaeIII	GTNAC	3 cut(s)	41, 397, 854
MalI	GATC	9 cut(s)	36, 69, 78, 607, 612, 742, 1071, 1161, 1399
MboI	GATC	9 cut(s)	34, 67, 76, 605, 610, 740, 1069, 1159, 1397
MboII	GAAGA	8 cut(s)	51, 371, 490, 503, 505, 938, 972, 1131
MflI	RGATCY	3 cut(s)	605, 1159, 1397
MhlI	GDGCHC	3 cut(s)	392, 1001, 1257
MluCI	AATT	6 cut(s)	7, 133, 409, 689, 724, 1383
MluI	ACGCGT	1 cut(s)	731
MlyI	GAGTC	3 cut(s)	167, 923, 971
MmeI	TCCRAC	3 cut(s)	246, 1149, 1320
MroXI	GAANNNNTTC	1 cut(s)	285
MslI	CAYNNNNRTG	1 cut(s)	852
MspA1I	CMGCKG	2 cut(s)	395, 766
MspI	CCGG	3 cut(s)	127, 791, 809
MspR9I	CCNGG	3 cut(s)	227, 680, 810
Mva1269I	GAATGC	2 cut(s)	274, 1352
MvaI	CCWGG	2 cut(s)	227, 680
MvnI	CGCG	2 cut(s)	395, 733
MwoI	GCNNNNNNNGC	3 cut(s)	887, 996, 1211
NciI	CCSGG	1 cut(s)	810
NcoI	CCATGG	2 cut(s)	885, 1149
NdeII	GATC	9 cut(s)	34, 67, 76, 605, 610, 740, 1069, 1159, 1397
NlaIV	GGNNCC	2 cut(s)	462, 795
NmeAIII	GCCGAG	1 cut(s)	1240
NmuCI	GTSAC	2 cut(s)	397, 854
NspI	RCATGY	4 cut(s)	367, 718, 940, 997
OliI	CACNNNNGTG	1 cut(s)	852
PaeR7I	CTCGAG	1 cut(s)	1330
PagI	TCATGA	1 cut(s)	588
PceI	AGGCCT	1 cut(s)	816
PciI	ACATGT	3 cut(s)	363, 936, 993
PciSI	GCTCTTC	1 cut(s)	955
PcsI	WCGNNNNNNNCGW	2 cut(s)	1100, 1398
PctI	GAATGC	2 cut(s)	274, 1352
PdmI	GAANNNNTTC	1 cut(s)	285
PfeI	GAWTC	4 cut(s)	110, 308, 469, 1192
PflFI	GACNNNGTC	1 cut(s)	1082
PflMI	CCANNNNNTGG	2 cut(s)	956, 1030
PfoI	TCCNGGA	2 cut(s)	678, 808
PkrI	GCNGC	3 cut(s)	176, 258, 883
PleI	GAGTC	3 cut(s)	166, 923, 971
PmaCI	CACGTG	1 cut(s)	1104
PmlI	CACGTG	1 cut(s)	1104
PpsI	GAGTC	3 cut(s)	166, 923, 971
Ppu21I	YACGTR	1 cut(s)	1104
PscI	ACATGT	3 cut(s)	363, 936, 993
Psp124BI	GAGCTC	1 cut(s)	1257
Psp6I	CCWGG	2 cut(s)	225, 678
PspCI	CACGTG	1 cut(s)	1104
PspEI	GGTNACC	1 cut(s)	41
PspGI	CCWGG	2 cut(s)	225, 678
PspN4I	GGNNCC	2 cut(s)	462, 795
PspPI	GGNCC	1 cut(s)	1146
PsuI	RGATCY	3 cut(s)	605, 1159, 1397
PsyI	GACNNNGTC	1 cut(s)	1082
RsaI	GTAC	5 cut(s)	122, 666, 736, 1100, 1317
RsaNI	GTAC	5 cut(s)	121, 665, 735, 1099, 1316
RseI	CAYNNNNRTG	1 cut(s)	852
SacI	GAGCTC	1 cut(s)	1257
SacII	CCGCGG	1 cut(s)	396
SapI	GCTCTTC	1 cut(s)	955
SatI	GCNGC	3 cut(s)	175, 257, 882
Sau3AI	GATC	9 cut(s)	34, 67, 76, 605, 610, 740, 1069, 1159, 1397
Sau96I	GGNCC	1 cut(s)	1146
ScaI	AGTACT	2 cut(s)	666, 1317
SchI	GAGTC	3 cut(s)	167, 923, 971
ScrFI	CCNGG	3 cut(s)	227, 680, 810
SduI	GDGCHC	3 cut(s)	392, 1001, 1257
Sfr274I	CTCGAG	1 cut(s)	1330
Sfr303I	CCGCGG	1 cut(s)	396
SgrBI	CCGCGG	1 cut(s)	396
SinI	GGWCC	1 cut(s)	1146
SlaI	CTCGAG	1 cut(s)	1330
SmiMI	CAYNNNNRTG	1 cut(s)	852
SmlI	CTYRAG	3 cut(s)	317, 451, 1330
SmoI	CTYRAG	3 cut(s)	317, 451, 1330
Sse9I	AATT	6 cut(s)	7, 133, 409, 689, 724, 1383
SseBI	AGGCCT	1 cut(s)	816
SsiI	CCGC	7 cut(s)	89, 124, 393, 395, 766, 988, 1205
SstI	GAGCTC	1 cut(s)	1257
StuI	AGGCCT	1 cut(s)	816
StyD4I	CCNGG	3 cut(s)	225, 678, 808
StyI	CCWWGG	4 cut(s)	197, 885, 1149, 1269
TaaI	ACNGT	3 cut(s)	436, 509, 860
TaiI	ACGT	3 cut(s)	856, 1106, 1114
TaqI	TCGA	5 cut(s)	413, 1086, 1094, 1331, 1392
TasI	AATT	6 cut(s)	7, 133, 409, 689, 724, 1383
TatI	WGTACW	3 cut(s)	664, 1098, 1315
TfiI	GAWTC	4 cut(s)	110, 308, 469, 1192
TscAI	CASTG	2 cut(s)	439, 471
TseFI	GTSAC	2 cut(s)	397, 854
TseI	GCWGC	3 cut(s)	174, 256, 881
Tsp45I	GTSAC	2 cut(s)	397, 854
TspDTI	ATGAA	8 cut(s)	39, 266, 294, 341, 518, 577, 605, 1131
TspGWI	ACGGA	1 cut(s)	1390
TspRI	CASTG	2 cut(s)	439, 471
Tth111I	GACNNNGTC	1 cut(s)	1082
Van91I	CCANNNNNTGG	2 cut(s)	956, 1030
VneI	GTGCAC	2 cut(s)	388, 997
VpaK11BI	GGWCC	1 cut(s)	1146
XagI	CCTNNNNNAGG	1 cut(s)	810
XapI	RAATTY	3 cut(s)	133, 409, 689
XceI	RCATGY	4 cut(s)	367, 718, 940, 997
XhoI	CTCGAG	1 cut(s)	1330
XmnI	GAANNNNTTC	1 cut(s)	285
ZrmI	AGTACT	2 cut(s)	666, 1317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.