Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0005829

Physical Location & Seq

Genomic Coordinates Forward (+)

21752039 .. 21754947

Gene Structure 2909 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G170400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGTTGAGTATGTGCAGGGTTTTGAGCAATTAGAATTTAGAACACAAGTTTTGAAGGCTCCAATGGACAATTTATCAAATTCTGATGAAAACTATGATCTGGGATATCTTCCTTCACCTTCTTCTGTGGATCAGAATGATCACTCACTGGCAGAAACTTCAACAAGTGGTGATTCTTTTATGTACCGCCGGACGAATTCAGAGACCTCAGCTTTGTCGGAGTCTGTAGATGATAGCAGTTACTCTGGTGAAGCATCCCCTTGGTTCTGCCCAAATGTGAAAACCAGATTTCATAACCAGGTTGCTCTTACCAGACTAGGAATGAAGCAGCACAACAAGAATGCCACAGATGATAAGCTTGAAGATCATGAAGCAGTAGATGCAGAGCTTGAGATGATGAAAGAACGATTTGCAAAACTCTTGTTGGGTGAGGACATGTCAGGAAGTGGGAAAGGGGTGTGCACTGCGGTTACAATCTCAAATTCGATAACCAACCTCTATGCCACTGTGTTTGGGCAAAATTTGAGGTTAGAGCCCTTGAACCCTGAGAAGAAAGCAATGTGGAAGAGGGAAATGAATTGCCTGTTATCAGTTTGTGATTACATAGTAGAACTCATCCCCATATCCCAAAATTTGCAAGATGGGACAGAAATGGAGTTGATGACAAGCAGACCGAGATCTGATCTCTATATCAACCTTCCAGCTTTGCAAAAGCTTGATGCAATGCTTATTGAAGTACTTGATAGTTTCCAAGATACAGAATTCTGGTATGCAGAAAAAGGGAGCATGTCATCAAACTCAAACCATTCAGGTTCAGGATCGTTCCGTAGGGTTATTGTTCAGCGGAACGAGGAGAAATGGTGGTTGCCGATTCCATGTGTTCCTCCAGGTGGCCTCTCTGAGAAGTCAAGGAAGCATTTGAAACACAAACGTGACTCTTCTAATCAAATCCACAAAGCAGCCATGGCAATCAATAGCAGCATTCTTGCTGAGATGGAAATTCCAGACTCATACATGTCAACTCTTCCCAAGAGTGGAAAATCGTGTCTTGGGGATTCCATTTACCGCTACATGTGCACCACAGACAAGTTCTCCCCAGAACATCTTCTCGACTGCCTCAATCTAGCAACTGAACATGAAGCACTTGAGCTTGCAGACAGGGTTGAAGCTTCAATGTACACATGGAGACGTAAAGCATGCATGAGCAATTCAAAATCTTCATGGGTCATGGTGAAGGATCTAATGTCGGAAACAGACAGGAGTGACAAAAACCATATTTTGGCAGAGAGAGCCGAGTGTTTGTTGTTCTGCTTGAAGCAGAGATATCCTGAGCTCTCTCAGACATCCTTGGATACATGCAAGATCCAATACAATAGGGATGTGGGGCAAGCAGTACTGGAGAGTTACTCACGGGTGTTGGAAAGTTTGGCATTCAACATTGTTGCTTGGATTGAAGATGTAATTTGTGTTGAAAGATCTGTGAGAAACCAAGGCAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008150 GO:0009505 GO:0009531 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009664 GO:0009814 GO:0009817 GO:0009888 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0016020 GO:0016043 GO:0016049 GO:0017016 GO:0017048 GO:0019899 GO:0021700 GO:0022622 GO:0030154 GO:0030312 GO:0031267 GO:0032501 GO:0032502 GO:0040007 GO:0043207 GO:0044424 GO:0044464 GO:0045087 GO:0045229 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050832 GO:0050896 GO:0051020 GO:0051704 GO:0051707 GO:0060560 GO:0065007 GO:0065009 GO:0071554 GO:0071555 GO:0071669 GO:0071695 GO:0071840 GO:0071944 GO:0080147 GO:0090558 GO:0090627 GO:0098542 GO:0098772 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

500

Amino Acids

56.59

Weight (kDa)

5.24

Isoelectric Point (pI)

55.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005829)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01700 AT1G01700 AT1G01700 AT1G01700 AT1G01700 AT4G00460 AT4G00460 AT4G00460 AT4G00460
fragaria_vesca	FvH4_7g14260 FvH4_7g14260 FvH4_7g14260 FvH4_7g14260
malus_domestica	MD01G1060500.v1.1 MD07G1137200.v1.1
prunus_persica	Prupe.2G170400_v2.0.a1
pyrus_communis	pycom07g13500
rosa_chinensis	RchiOBHm_Chr1g0355251
rosa_laevigata	RLG00000028167
rosa_multiflora	Rmu_sc0003115.1_g000043
rosa_roxburghii	Rroxscaffold_4G00300560
rosa_rugosa	Rorug01G0245800 Rorug01G0245800
rosa_samantha	Rh1AG258200 Rh1BG227800 Rh1CG241900 Rh1DG255600
rosa_wichuraiana	Rw1G022790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1279
AciI	CCGC	4 cut(s)	187, 467, 844, 1066
AclWI	GGATC	4 cut(s)	138, 826, 1245, 1357
AcsI	RAATTY	8 cut(s)	35, 79, 196, 481, 520, 631, 761, 999
AfaI	GTAC	4 cut(s)	185, 738, 1178, 1395
AfiI	CCNNNNNNNGG	3 cut(s)	890, 1034, 1279
AflIII	ACRYGT	3 cut(s)	435, 1014, 1071
AjnI	CCWGG	2 cut(s)	297, 886
AleI	CACNNNNGTG	1 cut(s)	930
AluBI	AGCT	8 cut(s)	212, 358, 388, 704, 715, 1150, 1169, 1333
AluI	AGCT	8 cut(s)	212, 358, 388, 704, 715, 1150, 1169, 1333
Alw21I	GWGCWC	3 cut(s)	464, 1079, 1335
Alw26I	GTCTC	2 cut(s)	197, 1180
Alw44I	GTGCAC	2 cut(s)	460, 1075
AlwI	GGATC	4 cut(s)	138, 826, 1245, 1357
AoxI	GGCC	1 cut(s)	892
ApaLI	GTGCAC	2 cut(s)	460, 1075
ApeKI	GCWGC	3 cut(s)	328, 959, 978
ApoI	RAATTY	8 cut(s)	35, 79, 196, 481, 520, 631, 761, 999
ArsI	GACNNNNNNTTYG	2 cut(s)	196, 228
Asp700I	GAANNNNTTC	1 cut(s)	1104
AsuHPI	GGTGA	5 cut(s)	108, 182, 260, 440, 1243
BaeGI	GKGCMC	2 cut(s)	464, 1079
BanII	GRGCYC	2 cut(s)	537, 1335
Bbv12I	GWGCWC	3 cut(s)	464, 1079, 1335
BbvCI	CCTCAGC	1 cut(s)	208
BbvI	GCAGC	3 cut(s)	340, 971, 990
BccI	CCATC	2 cut(s)	635, 988
BciT130I	CCWGG	2 cut(s)	299, 888
BciVI	GTATCC	1 cut(s)	1345
BclI	TGATCA	1 cut(s)	139
BcoDI	GTCTC	2 cut(s)	197, 1180
BfaI	CTAG	2 cut(s)	317, 1124
BfmI	CTRYAG	1 cut(s)	225
BfuI	GTATCC	1 cut(s)	1345
BglII	AGATCT	2 cut(s)	677, 1475
BisI	GCNGC	3 cut(s)	329, 960, 979
BlsI	GCNGC	3 cut(s)	330, 961, 980
BmcAI	AGTACT	2 cut(s)	738, 1395
Bme1390I	CCNGG	2 cut(s)	299, 888
BmiI	GGNNCC	1 cut(s)	60
BmrFI	CCNGG	2 cut(s)	299, 888
BmsI	GCATC	3 cut(s)	263, 370, 709
BplI	GAGNNNNNCTC	2 cut(s)	1391, 1423
BpmI	CTGGAG	2 cut(s)	870, 1418
Bpu10I	CCTNAGC	2 cut(s)	208, 1329
BpuEI	CTTGAG	2 cut(s)	410, 1166
BsaI	GGTCTC	1 cut(s)	197
BsaJI	CCNNGG	4 cut(s)	260, 963, 1347, 1489
BsaXI	ACNNNNNCTCC	4 cut(s)	845, 875, 1076, 1106
Bsc4I	CCNNNNNNNGG	3 cut(s)	890, 1034, 1279
Bse1I	ACTGG	2 cut(s)	153, 1401
Bse3DI	GCAATG	2 cut(s)	564, 729
BseBI	CCWGG	2 cut(s)	299, 888
BseDI	CCNNGG	4 cut(s)	260, 963, 1347, 1489
BseGI	GGATG	4 cut(s)	254, 615, 1343, 1384
BseLI	CCNNNNNNNGG	3 cut(s)	890, 1034, 1279
BseMI	GCAATG	2 cut(s)	564, 729
BseMII	CTCAG	6 cut(s)	222, 537, 891, 981, 1320, 1352
BseNI	ACTGG	2 cut(s)	153, 1401
BseRI	GAGGAG	1 cut(s)	866
BseSI	GKGCMC	2 cut(s)	464, 1079
BseXI	GCAGC	3 cut(s)	340, 971, 990
BsgI	GTGCAG	1 cut(s)	35
BshFI	GGCC	1 cut(s)	894
BsiHKAI	GWGCWC	3 cut(s)	464, 1079, 1335
BsiSI	CCGG	1 cut(s)	190
BslFI	GGGAC	1 cut(s)	658
BslI	CCNNNNNNNGG	3 cut(s)	890, 1034, 1279
BsmAI	GTCTC	2 cut(s)	197, 1180
BsmBI	CGTCTC	1 cut(s)	1180
BsmFI	GGGAC	1 cut(s)	658
BsmI	GAATGC	3 cut(s)	346, 981, 1430
BsnI	GGCC	1 cut(s)	894
Bso31I	GGTCTC	1 cut(s)	197
Bsp1286I	GDGCHC	4 cut(s)	464, 537, 1079, 1335
Bsp1407I	TGTACA	1 cut(s)	1176
Bsp19I	CCATGG	1 cut(s)	963
BspACI	CCGC	4 cut(s)	187, 467, 844, 1066
BspANI	GGCC	1 cut(s)	894
BspCNI	CTCAG	6 cut(s)	221, 538, 892, 982, 1321, 1351
BspHI	TCATGA	1 cut(s)	367
BspLI	GGNNCC	1 cut(s)	60
BspPI	GGATC	4 cut(s)	138, 826, 1245, 1357
BspTNI	GGTCTC	1 cut(s)	197
BsrDI	GCAATG	2 cut(s)	564, 729
BsrGI	TGTACA	1 cut(s)	1176
BsrI	ACTGG	2 cut(s)	153, 1401
BssECI	CCNNGG	4 cut(s)	260, 963, 1347, 1489
BssT1I	CCWWGG	4 cut(s)	260, 963, 1347, 1489
Bst2UI	CCWGG	2 cut(s)	299, 888
Bst4CI	ACNGT	1 cut(s)	508
Bst6I	CTCTTC	3 cut(s)	560, 943, 1029
BstAPI	GCANNNNNTGC	1 cut(s)	380
BstAUI	TGTACA	1 cut(s)	1176
BstC8I	GCNNGC	3 cut(s)	1152, 1198, 1389
BstDEI	CTNAG	6 cut(s)	208, 546, 900, 990, 1329, 1338
BstDSI	CCRYGG	1 cut(s)	963
BstF5I	GGATG	4 cut(s)	254, 615, 1343, 1384
BstMAI	GTCTC	2 cut(s)	197, 1180
BstMWI	GCNNNNNNNGC	4 cut(s)	380, 965, 1074, 1289
BstNI	CCWGG	2 cut(s)	299, 888
BstNSI	RCATGY	6 cut(s)	439, 790, 1018, 1075, 1200, 1359
BstSCI	CCNGG	2 cut(s)	297, 886
BstSFI	CTRYAG	1 cut(s)	225
BstSLI	GKGCMC	2 cut(s)	464, 1079
BstV1I	GCAGC	3 cut(s)	340, 971, 990
BstX2I	RGATCY	4 cut(s)	677, 1237, 1362, 1475
BstYI	RGATCY	4 cut(s)	677, 1237, 1362, 1475
BsuI	GTATCC	1 cut(s)	1345
BsuRI	GGCC	1 cut(s)	894
BtgI	CCRYGG	1 cut(s)	963
BtsCI	GGATG	4 cut(s)	254, 615, 1343, 1384
BtsI	GCAGTG	1 cut(s)	462
BtsIMutI	CAGTG	3 cut(s)	146, 462, 504
Cac8I	GCNNGC	3 cut(s)	1152, 1198, 1389
CciI	TCATGA	1 cut(s)	367
CsiI	ACCWGGT	1 cut(s)	297
Csp6I	GTAC	4 cut(s)	184, 737, 1177, 1394
CspCI	CAANNNNNGTGG	2 cut(s)	493, 528
CviQI	GTAC	4 cut(s)	184, 737, 1177, 1394
DdeI	CTNAG	6 cut(s)	208, 546, 900, 990, 1329, 1338
Eam1104I	CTCTTC	3 cut(s)	560, 943, 1029
EarI	CTCTTC	3 cut(s)	560, 943, 1029
Ecl136II	GAGCTC	1 cut(s)	1333
Eco130I	CCWWGG	4 cut(s)	260, 963, 1347, 1489
Eco24I	GRGCYC	2 cut(s)	537, 1335
Eco31I	GGTCTC	1 cut(s)	197
Eco32I	GATATC	2 cut(s)	107, 1325
Eco53kI	GAGCTC	1 cut(s)	1333
EcoICRI	GAGCTC	1 cut(s)	1333
EcoRI	GAATTC	2 cut(s)	196, 761
EcoRII	CCWGG	2 cut(s)	297, 886
EcoRV	GATATC	2 cut(s)	107, 1325
EcoT14I	CCWWGG	4 cut(s)	260, 963, 1347, 1489
EcoT22I	ATGCAT	1 cut(s)	1202
EcoT38I	GRGCYC	2 cut(s)	537, 1335
ErhI	CCWWGG	4 cut(s)	260, 963, 1347, 1489
Esp3I	CGTCTC	1 cut(s)	1180
FaqI	GGGAC	1 cut(s)	658
FbaI	TGATCA	1 cut(s)	139
Fnu4HI	GCNGC	3 cut(s)	329, 960, 979
FokI	GGATG	4 cut(s)	241, 602, 1330, 1391
FriOI	GRGCYC	2 cut(s)	537, 1335
Fsp4HI	GCNGC	3 cut(s)	329, 960, 979
FspBI	CTAG	2 cut(s)	317, 1124
GluI	GCNGC	3 cut(s)	329, 960, 979
GsuI	CTGGAG	2 cut(s)	870, 1418
HaeIII	GGCC	1 cut(s)	894
HapII	CCGG	1 cut(s)	190
HincII	GTYRAC	1 cut(s)	1020
HindII	GTYRAC	1 cut(s)	1020
HindIII	AAGCTT	3 cut(s)	356, 713, 1167
HinfI	GANTC	6 cut(s)	173, 221, 871, 935, 1007, 1055
HpaII	CCGG	1 cut(s)	190
HphI	GGTGA	5 cut(s)	108, 182, 260, 440, 1243
Hpy166II	GTNNAC	4 cut(s)	462, 1020, 1077, 1179
Hpy188I	TCNGA	8 cut(s)	85, 135, 202, 220, 682, 901, 1249, 1341
Hpy188III	TCNNGA	6 cut(s)	368, 441, 816, 1004, 1109, 1328
Hpy8I	GTNNAC	4 cut(s)	462, 1020, 1077, 1179
HpyAV	CCTTC	5 cut(s)	49, 123, 129, 707, 1228
HpyCH4III	ACNGT	1 cut(s)	508
HpyCH4IV	ACGT	2 cut(s)	931, 1189
HpyF10VI	GCNNNNNNNGC	4 cut(s)	380, 965, 1074, 1289
HpyF3I	CTNAG	6 cut(s)	208, 546, 900, 990, 1329, 1338
HpySE526I	ACGT	2 cut(s)	931, 1189
Ksp22I	TGATCA	1 cut(s)	139
LmnI	GCTCC	2 cut(s)	64, 783
Lsp1109I	GCAGC	3 cut(s)	340, 971, 990
LweI	GCATC	3 cut(s)	263, 370, 709
MabI	ACCWGGT	1 cut(s)	297
MaeI	CTAG	2 cut(s)	317, 1124
MaeII	ACGT	2 cut(s)	931, 1189
MaeIII	GTNAC	5 cut(s)	239, 469, 932, 1262, 1403
MflI	RGATCY	4 cut(s)	677, 1237, 1362, 1475
MhlI	GDGCHC	4 cut(s)	464, 537, 1079, 1335
MlyI	GAGTC	3 cut(s)	230, 929, 1001
MmeI	TCCRAC	3 cut(s)	198, 1227, 1398
MnlI	CCTC	9 cut(s)	217, 424, 506, 519, 561, 844, 894, 905, 1127
Mph1103I	ATGCAT	1 cut(s)	1202
MroXI	GAANNNNTTC	1 cut(s)	1104
MslI	CAYNNNNRTG	1 cut(s)	930
MspA1I	CMGCKG	1 cut(s)	844
MspI	CCGG	1 cut(s)	190
MspR9I	CCNGG	2 cut(s)	299, 888
Mva1269I	GAATGC	3 cut(s)	346, 981, 1430
MvaI	CCWGG	2 cut(s)	299, 888
MwoI	GCNNNNNNNGC	4 cut(s)	380, 965, 1074, 1289
NcoI	CCATGG	1 cut(s)	963
NlaIV	GGNNCC	1 cut(s)	60
NmeAIII	GCCGAG	1 cut(s)	1318
NmuCI	GTSAC	2 cut(s)	932, 1262
NsiI	ATGCAT	1 cut(s)	1202
NspI	RCATGY	6 cut(s)	439, 790, 1018, 1075, 1200, 1359
OliI	CACNNNNGTG	1 cut(s)	930
PaeI	GCATGC	1 cut(s)	1200
PagI	TCATGA	1 cut(s)	367
PciI	ACATGT	3 cut(s)	435, 1014, 1071
PctI	GAATGC	3 cut(s)	346, 981, 1430
PdmI	GAANNNNTTC	1 cut(s)	1104
PfeI	GAWTC	3 cut(s)	173, 871, 1055
PflMI	CCANNNNNTGG	1 cut(s)	1279
PkrI	GCNGC	3 cut(s)	330, 961, 980
PleI	GAGTC	3 cut(s)	229, 929, 1001
PpsI	GAGTC	3 cut(s)	229, 929, 1001
PscI	ACATGT	3 cut(s)	435, 1014, 1071
Psp124BI	GAGCTC	1 cut(s)	1335
Psp6I	CCWGG	2 cut(s)	297, 886
PspGI	CCWGG	2 cut(s)	297, 886
PspN4I	GGNNCC	1 cut(s)	60
PsuI	RGATCY	4 cut(s)	677, 1237, 1362, 1475
RsaI	GTAC	4 cut(s)	185, 738, 1178, 1395
RsaNI	GTAC	4 cut(s)	184, 737, 1177, 1394
RseI	CAYNNNNRTG	1 cut(s)	930
SacI	GAGCTC	1 cut(s)	1335
SatI	GCNGC	3 cut(s)	329, 960, 979
ScaI	AGTACT	2 cut(s)	738, 1395
SchI	GAGTC	3 cut(s)	230, 929, 1001
ScrFI	CCNGG	2 cut(s)	299, 888
SduI	GDGCHC	4 cut(s)	464, 537, 1079, 1335
SexAI	ACCWGGT	1 cut(s)	297
SfaNI	GCATC	3 cut(s)	263, 370, 709
SfcI	CTRYAG	1 cut(s)	225
SmiMI	CAYNNNNRTG	1 cut(s)	930
SmlI	CTYRAG	2 cut(s)	389, 1145
SmoI	CTYRAG	2 cut(s)	389, 1145
SphI	GCATGC	1 cut(s)	1200
SsiI	CCGC	4 cut(s)	187, 467, 844, 1066
SspMI	CTAG	2 cut(s)	317, 1124
SstI	GAGCTC	1 cut(s)	1335
StyD4I	CCNGG	2 cut(s)	297, 886
StyI	CCWWGG	4 cut(s)	260, 963, 1347, 1489
TaaI	ACNGT	1 cut(s)	508
TaiI	ACGT	2 cut(s)	934, 1192
TaqI	TCGA	2 cut(s)	485, 1110
TaqII	GACCGA	1 cut(s)	688
TatI	WGTACW	3 cut(s)	736, 1176, 1393
TfiI	GAWTC	3 cut(s)	173, 871, 1055
TscAI	CASTG	3 cut(s)	153, 469, 511
TseFI	GTSAC	2 cut(s)	932, 1262
TseI	GCWGC	3 cut(s)	328, 959, 978
Tsp45I	GTSAC	2 cut(s)	932, 1262
TspDTI	ATGAA	8 cut(s)	102, 281, 338, 384, 413, 590, 1152, 1209
TspGWI	ACGGA	1 cut(s)	815
TspRI	CASTG	3 cut(s)	153, 469, 511
Van91I	CCANNNNNTGG	1 cut(s)	1279
VneI	GTGCAC	2 cut(s)	460, 1075
XapI	RAATTY	8 cut(s)	35, 79, 196, 481, 520, 631, 761, 999
XceI	RCATGY	6 cut(s)	439, 790, 1018, 1075, 1200, 1359
XmnI	GAANNNNTTC	1 cut(s)	1104
XspI	CTAG	2 cut(s)	317, 1124
ZrmI	AGTACT	2 cut(s)	738, 1395
Zsp2I	ATGCAT	1 cut(s)	1202

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.