MD07G1150500.v1.1

UV-stimulated scaffold protein A homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0014390
Physical Location & Seq
Reverse (-)
21879339 .. 21882036
2698 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1150500.v1.1.491

Sequence Viewer

Length: 1938 bp
ATGGAAGAAGAGGAAGGAGGGAAGGTTAGGGTTTTGATAGAGACGGCGACGATCTCGACCGAACCGGATGTCGACCCACGCCTCCTCAAGGCCATCAAGTCGGTTGTCCGATACTCCGATTCGGAGCTCCGACTCGCCGCTCGTATTCTCATGGATCTTATGAAGCGCGAACACTCTCAGGTGCGCTACCTCACACTTCTTATCATTGATGAGCTTTTTATGAGATCAAAGCTATTTAGAACCCTTGTTGTGGAAAATTTGGATCAGTTATTGACTTTAAGTGTTGGATTTAGAATACATTTGTCACTCCCACCTCCGGCAAATGTTGCAACTGCTCTGCGTAAGAAGGCAATAGAGTTTTTGGAGAAGTGGAATTCTTCGTTTGGGGTTCACTATAAGCAGATTAGGTTAGGGTTTGATTACCTTAAGAACACCCTTAAGTATCAGTTCCCGAATCTACAAGAAACTGCGACTCGGCTTCAGCAGGAGAGAAGGGAAAGGGAGAGGAAGACAAGAAAGATCTTGTTGAAAAAGTTTGAGATTTTGGAAAAGAATTTTGTGTCAATTAAGGAAGAAATTCAATCTACCGTTGATGAGATTGGGGAGTGTTTAGAAATTGTACGCCCTAAAGAGGAAGGTGTGCCGTTTTGTCCATTAGATGAGGAAGATATCGAAGAGTTTCATTCTTATGAGTTCCGGCAGTTGCGCTTACAAGCATTGGAAGAAGGAGAAAAGCTTCATGAGAATAGTGAAAACAAAGTGGTTTTTGATGCCCTGCGGGAGCTTTACAAGATATTGGTAAAGCATTTGACTGCAGTGCAAGAATGGATCCTTGTTCTTGTAAAAGTTGAACTGACTGATAACAGATCCAGGGATTCATATTTGAAGGAGTTCATCGATATCCGGAATAATATTCAATCAGTGAAGAAGAAGTGTGAAGAATCGGGATGCAATCTTTCAAACATTGCAAAGCACGAGGAAGAAGATTTTTGGGAGGAAGGCAAGATCGAAACAACTGAGGGTGGGAATTTTAATCTTCCCAATAACAGAACTGGAGGTCTGGCTGTGGCATCAACATCCAAGGAGGTGCAAGGTAGCATTCCTAAACGCCATGATAAGGAGAGCGATGCCAATAAGAGGCTCAGTCATGAAGGTGGGGGAAGCAATTCAGACCCTCTGAGAAGTAAGCTTCTGGCTGAAGCTCCTGAGGTGAACTGGAGCAATCATTTGGCCAGTTGGGGTTCAAAGATGGATGTATTGGCTAACCATCGGGGGTTGGAGCTTGAAAGTCATTGGGGCAGGGTGGATCAGGATGCAGTTATTCCAGCAGAAAAGATTGCGGAATTAAATCTTCAGGCTACTGTGTACAAAGAAAAGCAGGTTGAAATTCAGCCATGCCGAGCACCATTAAGCAATGGAAAACTTTGTCCGAGAAGAGACTTGAGAATTTGCCCATTTCATGGACCTGTTATTCCCAGAGATGATGAGGGAAAGCCACTGAATCAGAACCCTCCAAAAGATGAGAAAGCTCCTGATTTAGGGACCAATTTAGTAGAGCAGTTAACGAAACAAGCCGTGCAGAATGTTCGTGAGAAAGATAAAGAGTTGGCAAGGAAGAGAGAAATAGATAAAAAGGCACTGAAGCGTGCCAAGCTTGCCAAAATAAGAGAACACAATGAAGCGGTTTTACGGGATTCTGCAATCGCTTCAACTTCTAAATCTGCATTTATTGGAGAAGATTGGGAGCCAAGTACTAGTAGGAACCCGTCATTCAGAAACAAAAAGAAAACCCTTGCCTCCATGCTGCAGAAGAAAGAGACACCAAAAGATAGATTAGCTCGGAGGATTTTGAATACACGAGCAAGTGCTGCAACTGTAAGACAACTTACATTGGGCGAGGATGCAAATTACCGAGAAGCCTTCCCGAATCAGTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2043

Protein Analysis

646

Amino Acids

74.11

Weight (kDa)

8.4

Isoelectric Point (pI)

48.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVSSA_N PF20867 9 - 145 7.8e-37 UVSSA N-terminal domain
DUF2043 PF09740 400 - 502 9.3e-31 Uncharacterized conserved protein (DUF2043)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014390)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61800 AT3G61800
fragaria_vesca FvH4_7g16650
malus_domestica MD01G1082100.v1.1 MD07G1150500.v1.1
prunus_persica Prupe.2G189300_v2.0.a1
pyrus_communis pycom07g14900
rosa_chinensis RchiOBHm_Chr1g0359811
rosa_laevigata RLG00000027852
rosa_multiflora Rmu_ssc0000371.1_g000006
rosa_roxburghii Rroxscaffold_4G00296810
rosa_rugosa Rorug01G0272800
rosa_samantha Rh1AG286700 Rh1BG252600 Rh1CG269800 Rh1DG281600
rosa_wichuraiana Rw1G025460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1369
AccB7I CCANNNNNTGG 1 cut(s) 1460
AccBSI CCGCTC 1 cut(s) 140
AccI GTMKAC 1 cut(s) 72
AccII CGCG 1 cut(s) 168
AccIII TCCGGA 1 cut(s) 903
AciI CCGC 4 cut(s) 138, 778, 1340, 1682
AclWI GGATC 6 cut(s) 162, 270, 823, 836, 861, 1314
AcoI YGGCCR 1 cut(s) 1230
AcsI RAATTY 7 cut(s) 256, 373, 553, 576, 1027, 1386, 1446
AcuI CTGAAG 4 cut(s) 464, 1218, 1337, 1661
AfaI GTAC 3 cut(s) 621, 1367, 1753
AfiI CCNNNNNNNGG 8 cut(s) 88, 250, 316, 631, 1117, 1137, 1460, 1538
AflII CTTAAG 2 cut(s) 425, 437
AhlI ACTAGT 1 cut(s) 1754
AjnI CCWGG 1 cut(s) 869
Alw21I GWGCWC 2 cut(s) 129, 1405
Alw26I GTCTC 3 cut(s) 35, 1431, 1811
AlwI GGATC 6 cut(s) 162, 270, 823, 836, 861, 1314
Aor13HI TCCGGA 1 cut(s) 903
AoxI GGCC 2 cut(s) 90, 1230
ApeKI GCWGC 2 cut(s) 1804, 1868
ApoI RAATTY 7 cut(s) 256, 373, 553, 576, 1027, 1386, 1446
ArsI GACNNNNNNTTYG 2 cut(s) 54, 86
Asp700I GAANNNNTTC 5 cut(s) 576, 678, 735, 890, 1165
AspLEI GCGC 3 cut(s) 168, 186, 708
AspS9I GGNCC 2 cut(s) 1463, 1542
AsuHPI GGTGA 1 cut(s) 1222
AvaII GGWCC 2 cut(s) 1463, 1542
AxyI CCTNAGG 1 cut(s) 1206
BalI TGGCCA 1 cut(s) 1232
BamHI GGATCC 1 cut(s) 828
BanII GRGCYC 1 cut(s) 129
BarI GAAGNNNNNNTAC 2 cut(s) 1671, 1703
BauI CACGAG 2 cut(s) 974, 1857
BbsI GAAGAC 1 cut(s) 515
Bbv12I GWGCWC 2 cut(s) 129, 1405
BbvI GCAGC 2 cut(s) 1791, 1855
BccI CCATC 3 cut(s) 101, 1243, 1275
BceAI ACGGC 3 cut(s) 60, 628, 1559
BcgI CGANNNNNNTGC 2 cut(s) 1568, 1602
BciT130I CCWGG 1 cut(s) 871
BcoDI GTCTC 3 cut(s) 35, 1431, 1811
BcuI ACTAGT 1 cut(s) 1754
BfaI CTAG 1 cut(s) 1755
BfmI CTRYAG 2 cut(s) 813, 1805
BfrI CTTAAG 2 cut(s) 425, 437
BfuAI ACCTGC 1 cut(s) 1369
BglII AGATCT 1 cut(s) 519
BisI GCNGC 3 cut(s) 138, 1805, 1869
BlsI GCNGC 3 cut(s) 139, 1806, 1870
BmcAI AGTACT 1 cut(s) 1753
Bme1390I CCNGG 1 cut(s) 871
Bme18I GGWCC 2 cut(s) 1463, 1542
BmgT120I GGNCC 2 cut(s) 1463, 1542
BmiI GGNNCC 4 cut(s) 830, 1543, 1746, 1763
BmrFI CCNGG 1 cut(s) 871
BmsI GCATC 6 cut(s) 760, 938, 1079, 1117, 1303, 1891
BpiI GAAGAC 1 cut(s) 515
BpmI CTGGAG 2 cut(s) 1074, 1237
BpuEI CTTGAG 2 cut(s) 71, 1462
Bsa29I ATCGAT 1 cut(s) 897
BsaJI CCNNGG 2 cut(s) 870, 1080
BsaWI WCCGGW 2 cut(s) 64, 903
BsaXI ACNNNNNCTCC 2 cut(s) 9, 39
Bsc4I CCNNNNNNNGG 8 cut(s) 88, 250, 316, 631, 1117, 1137, 1460, 1538
Bse1I ACTGG 3 cut(s) 1057, 1220, 1233
Bse21I CCTNAGG 1 cut(s) 1206
Bse3DI GCAATG 2 cut(s) 963, 1420
BseAI TCCGGA 1 cut(s) 903
BseBI CCWGG 1 cut(s) 871
BseCI ATCGAT 1 cut(s) 897
BseDI CCNNGG 2 cut(s) 870, 1080
BseGI GGATG 6 cut(s) 73, 953, 1076, 1258, 1318, 1906
BseLI CCNNNNNNNGG 8 cut(s) 88, 250, 316, 631, 1117, 1137, 1460, 1538
BseMI GCAATG 2 cut(s) 963, 1420
BseMII CTCAG 5 cut(s) 191, 1008, 1156, 1169, 1197
BseNI ACTGG 3 cut(s) 1057, 1220, 1233
BseRI GAGGAG 1 cut(s) 74
BseXI GCAGC 2 cut(s) 1791, 1855
BsgI GTGCAG 1 cut(s) 1598
Bsh1236I CGCG 1 cut(s) 168
Bsh1285I CGRYCG 1 cut(s) 60
BshFI GGCC 2 cut(s) 92, 1232
BshVI ATCGAT 1 cut(s) 897
BsiEI CGRYCG 1 cut(s) 60
BsiHKAI GWGCWC 2 cut(s) 129, 1405
BsiSI CCGG 4 cut(s) 65, 317, 697, 904
BslFI GGGAC 1 cut(s) 1555
BslI CCNNNNNNNGG 8 cut(s) 88, 250, 316, 631, 1117, 1137, 1460, 1538
BsmAI GTCTC 3 cut(s) 35, 1431, 1811
BsmBI CGTCTC 1 cut(s) 35
BsmFI GGGAC 1 cut(s) 1555
BsmI GAATGC 1 cut(s) 1098
BsnI GGCC 2 cut(s) 92, 1232
Bsp1286I GDGCHC 2 cut(s) 129, 1405
Bsp13I TCCGGA 1 cut(s) 903
Bsp1407I TGTACA 1 cut(s) 1365
Bsp143I GATC 9 cut(s) 51, 154, 224, 262, 519, 828, 866, 1005, 1306
BspACI CCGC 4 cut(s) 138, 778, 1340, 1682
BspANI GGCC 2 cut(s) 92, 1232
BspCNI CTCAG 5 cut(s) 190, 1009, 1155, 1170, 1198
BspDI ATCGAT 1 cut(s) 897
BspEI TCCGGA 1 cut(s) 903
BspFNI CGCG 1 cut(s) 168
BspHI TCATGA 2 cut(s) 739, 1147
BspLI GGNNCC 4 cut(s) 830, 1543, 1746, 1763
BspMAI CTGCAG 2 cut(s) 817, 1809
BspMI ACCTGC 1 cut(s) 1369
BspPI GGATC 6 cut(s) 162, 270, 823, 836, 861, 1314
BspTI CTTAAG 2 cut(s) 425, 437
BsrBI CCGCTC 1 cut(s) 140
BsrDI GCAATG 2 cut(s) 963, 1420
BsrGI TGTACA 1 cut(s) 1365
BsrI ACTGG 3 cut(s) 1057, 1220, 1233
BssECI CCNNGG 2 cut(s) 870, 1080
BssMI GATC 9 cut(s) 51, 154, 224, 262, 519, 828, 866, 1005, 1306
BssSI CACGAG 2 cut(s) 974, 1857
BssT1I CCWWGG 1 cut(s) 1080
Bst2BI CACGAG 2 cut(s) 974, 1857
Bst2UI CCWGG 1 cut(s) 871
Bst4CI ACNGT 3 cut(s) 589, 1363, 1876
Bst6I CTCTTC 4 cut(s) 3, 669, 1429, 1610
BstAFI CTTAAG 2 cut(s) 425, 437
BstAPI GCANNNNNTGC 2 cut(s) 326, 1868
BstAUI TGTACA 1 cut(s) 1365
BstC8I GCNNGC 2 cut(s) 1647, 1656
BstDEI CTNAG 5 cut(s) 177, 1017, 1142, 1178, 1206
BstENI CCTNNNNNAGG 2 cut(s) 86, 1536
BstF5I GGATG 6 cut(s) 73, 953, 1076, 1258, 1318, 1906
BstFNI CGCG 1 cut(s) 168
BstHHI GCGC 3 cut(s) 168, 186, 708
BstKTI GATC 9 cut(s) 54, 157, 227, 265, 522, 831, 869, 1008, 1309
BstMAI GTCTC 3 cut(s) 35, 1431, 1811
BstMBI GATC 9 cut(s) 51, 154, 224, 262, 519, 828, 866, 1005, 1306
BstMCI CGRYCG 1 cut(s) 60
BstMWI GCNNNNNNNGC 4 cut(s) 326, 1651, 1655, 1868
BstNI CCWGG 1 cut(s) 871
BstSCI CCNGG 1 cut(s) 869
BstSFI CTRYAG 2 cut(s) 813, 1805
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 2 cut(s) 1791, 1855
BstV2I GAAGAC 1 cut(s) 515
BstX2I RGATCY 4 cut(s) 154, 519, 828, 866
BstYI RGATCY 4 cut(s) 154, 519, 828, 866
Bsu15I ATCGAT 1 cut(s) 897
Bsu36I CCTNAGG 1 cut(s) 1206
BsuRI GGCC 2 cut(s) 92, 1232
BsuTUI ATCGAT 1 cut(s) 897
BtgZI GCGATG 1 cut(s) 1140
BtsCI GGATG 6 cut(s) 73, 953, 1076, 1258, 1318, 1906
BtsI GCAGTG 1 cut(s) 822
BtsIMutI CAGTG 5 cut(s) 822, 927, 1496, 1637, 1937
BveI ACCTGC 1 cut(s) 1369
Cac8I GCNNGC 2 cut(s) 1647, 1656
CciI TCATGA 2 cut(s) 739, 1147
CfoI GCGC 3 cut(s) 168, 186, 708
Cfr13I GGNCC 2 cut(s) 1463, 1542
ClaI ATCGAT 1 cut(s) 897
Csp6I GTAC 3 cut(s) 620, 1366, 1752
CviAII CATG 7 cut(s) 151, 740, 1112, 1148, 1395, 1460, 1801
CviQI GTAC 3 cut(s) 620, 1366, 1752
DdeI CTNAG 5 cut(s) 177, 1017, 1142, 1178, 1206
DpnI GATC 9 cut(s) 53, 156, 226, 264, 521, 830, 868, 1007, 1308
DpnII GATC 9 cut(s) 51, 154, 224, 262, 519, 828, 866, 1005, 1306
EaeI YGGCCR 1 cut(s) 1230
Eam1104I CTCTTC 4 cut(s) 3, 669, 1429, 1610
EarI CTCTTC 4 cut(s) 3, 669, 1429, 1610
Ecl136II GAGCTC 1 cut(s) 127
Eco130I CCWWGG 1 cut(s) 1080
Eco24I GRGCYC 1 cut(s) 129
Eco32I GATATC 2 cut(s) 670, 901
Eco47I GGWCC 2 cut(s) 1463, 1542
Eco53kI GAGCTC 1 cut(s) 127
Eco57I CTGAAG 4 cut(s) 464, 1218, 1337, 1661
Eco81I CCTNAGG 1 cut(s) 1206
EcoICRI GAGCTC 1 cut(s) 127
EcoNI CCTNNNNNAGG 2 cut(s) 86, 1536
EcoRI GAATTC 1 cut(s) 373
EcoRII CCWGG 1 cut(s) 869
EcoRV GATATC 2 cut(s) 670, 901
EcoT14I CCWWGG 1 cut(s) 1080
EcoT38I GRGCYC 1 cut(s) 129
ErhI CCWWGG 1 cut(s) 1080
Esp3I CGTCTC 1 cut(s) 35
FaeI CATG 7 cut(s) 154, 743, 1115, 1151, 1398, 1463, 1804
FaqI GGGAC 1 cut(s) 1555
FatI CATG 7 cut(s) 150, 739, 1111, 1147, 1394, 1459, 1800
FauI CCCGC 1 cut(s) 771
FblI GTMKAC 1 cut(s) 72
Fnu4HI GCNGC 3 cut(s) 138, 1805, 1869
FokI GGATG 6 cut(s) 80, 960, 1063, 1265, 1325, 1913
FriOI GRGCYC 1 cut(s) 129
Fsp4HI GCNGC 3 cut(s) 138, 1805, 1869
FspBI CTAG 1 cut(s) 1755
GlaI GCGC 3 cut(s) 167, 185, 707
GluI GCNGC 3 cut(s) 138, 1805, 1869
GsuI CTGGAG 2 cut(s) 1074, 1237
HaeIII GGCC 2 cut(s) 92, 1232
HapII CCGG 4 cut(s) 65, 317, 697, 904
HhaI GCGC 3 cut(s) 168, 186, 708
Hin1II CATG 7 cut(s) 154, 743, 1115, 1151, 1398, 1463, 1804
Hin6I GCGC 3 cut(s) 166, 184, 706
HinP1I GCGC 3 cut(s) 166, 184, 706
HincII GTYRAC 2 cut(s) 73, 1563
HindII GTYRAC 2 cut(s) 73, 1563
HindIII AAGCTT 3 cut(s) 734, 1187, 1652
HinfI GANTC 9 cut(s) 119, 132, 454, 472, 875, 941, 1501, 1694, 1927
HpaI GTTAAC 1 cut(s) 1563
HpaII CCGG 4 cut(s) 65, 317, 697, 904
HphI GGTGA 1 cut(s) 1222
Hpy166II GTNNAC 5 cut(s) 73, 391, 1213, 1366, 1563
Hpy8I GTNNAC 5 cut(s) 73, 391, 1213, 1366, 1563
Hpy99I CGWCG 1 cut(s) 52
HpyCH4III ACNGT 3 cut(s) 589, 1363, 1876
HpyF10VI GCNNNNNNNGC 4 cut(s) 326, 1651, 1655, 1868
HpyF3I CTNAG 5 cut(s) 177, 1017, 1142, 1178, 1206
Hsp92II CATG 7 cut(s) 154, 743, 1115, 1151, 1398, 1463, 1804
HspAI GCGC 3 cut(s) 166, 184, 706
Kpn2I TCCGGA 1 cut(s) 903
KspAI GTTAAC 1 cut(s) 1563
Kzo9I GATC 9 cut(s) 51, 154, 224, 262, 519, 828, 866, 1005, 1306
LmnI GCTCC 8 cut(s) 124, 132, 781, 1207, 1218, 1279, 1534, 1744
Lsp1109I GCAGC 2 cut(s) 1791, 1855
LweI GCATC 6 cut(s) 760, 938, 1079, 1117, 1303, 1891
MaeI CTAG 1 cut(s) 1755
MaeIII GTNAC 1 cut(s) 303
MalI GATC 9 cut(s) 53, 156, 226, 264, 521, 830, 868, 1007, 1308
MbiI CCGCTC 1 cut(s) 140
MboI GATC 9 cut(s) 51, 154, 224, 262, 519, 828, 866, 1005, 1306
MflI RGATCY 4 cut(s) 154, 519, 828, 866
MhlI GDGCHC 2 cut(s) 129, 1405
MlsI TGGCCA 1 cut(s) 1232
MluNI TGGCCA 1 cut(s) 1232
MlyI GAGTC 2 cut(s) 126, 466
MmeI TCCRAC 3 cut(s) 154, 265, 1257
Mox20I TGGCCA 1 cut(s) 1232
MroI TCCGGA 1 cut(s) 903
MroXI GAANNNNTTC 5 cut(s) 576, 678, 735, 890, 1165
MscI TGGCCA 1 cut(s) 1232
MseI TTAA 8 cut(s) 278, 426, 438, 567, 1032, 1346, 1409, 1562
MslI CAYNNNNRTG 2 cut(s) 687, 1152
Msp20I TGGCCA 1 cut(s) 1232
MspCI CTTAAG 2 cut(s) 425, 437
MspI CCGG 4 cut(s) 65, 317, 697, 904
MspR9I CCNGG 1 cut(s) 871
Mva1269I GAATGC 1 cut(s) 1098
MvaI CCWGG 1 cut(s) 871
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 4 cut(s) 326, 1651, 1655, 1868
NdeII GATC 9 cut(s) 51, 154, 224, 262, 519, 828, 866, 1005, 1306
NlaIII CATG 7 cut(s) 154, 743, 1115, 1151, 1398, 1463, 1804
NlaIV GGNNCC 4 cut(s) 830, 1543, 1746, 1763
NmeAIII GCCGAG 2 cut(s) 454, 1424
NmuCI GTSAC 1 cut(s) 303
PagI TCATGA 2 cut(s) 739, 1147
PctI GAATGC 1 cut(s) 1098
PdmI GAANNNNTTC 5 cut(s) 576, 678, 735, 890, 1165
PfeI GAWTC 7 cut(s) 119, 454, 875, 941, 1501, 1694, 1927
PflMI CCANNNNNTGG 1 cut(s) 1460
PkrI GCNGC 3 cut(s) 139, 1806, 1870
PleI GAGTC 2 cut(s) 126, 466
PpsI GAGTC 2 cut(s) 126, 466
Psp124BI GAGCTC 1 cut(s) 129
Psp6I CCWGG 1 cut(s) 869
PspGI CCWGG 1 cut(s) 869
PspN4I GGNNCC 4 cut(s) 830, 1543, 1746, 1763
PspPI GGNCC 2 cut(s) 1463, 1542
PstI CTGCAG 2 cut(s) 817, 1809
PsuI RGATCY 4 cut(s) 154, 519, 828, 866
RsaI GTAC 3 cut(s) 621, 1367, 1753
RsaNI GTAC 3 cut(s) 620, 1366, 1752
RseI CAYNNNNRTG 2 cut(s) 687, 1152
SacI GAGCTC 1 cut(s) 129
SalI GTCGAC 1 cut(s) 71
SaqAI TTAA 8 cut(s) 278, 426, 438, 567, 1032, 1346, 1409, 1562
SatI GCNGC 3 cut(s) 138, 1805, 1869
Sau3AI GATC 9 cut(s) 51, 154, 224, 262, 519, 828, 866, 1005, 1306
Sau96I GGNCC 2 cut(s) 1463, 1542
ScaI AGTACT 1 cut(s) 1753
SchI GAGTC 2 cut(s) 126, 466
ScrFI CCNGG 1 cut(s) 871
SduI GDGCHC 2 cut(s) 129, 1405
SfaNI GCATC 6 cut(s) 760, 938, 1079, 1117, 1303, 1891
SfcI CTRYAG 2 cut(s) 813, 1805
SinI GGWCC 2 cut(s) 1463, 1542
SmiMI CAYNNNNRTG 2 cut(s) 687, 1152
SmlI CTYRAG 4 cut(s) 86, 425, 437, 1441
SmoI CTYRAG 4 cut(s) 86, 425, 437, 1441
SpeI ACTAGT 1 cut(s) 1754
SsiI CCGC 4 cut(s) 138, 778, 1340, 1682
SspI AATATT 1 cut(s) 913
SspMI CTAG 1 cut(s) 1755
SstI GAGCTC 1 cut(s) 129
StyD4I CCNGG 1 cut(s) 869
StyI CCWWGG 1 cut(s) 1080
TaaI ACNGT 3 cut(s) 589, 1363, 1876
TaqI TCGA 5 cut(s) 56, 72, 672, 897, 1008
TaqII GACCGA 1 cut(s) 74
TatI WGTACW 2 cut(s) 1365, 1751
TauI GCSGC 1 cut(s) 140
TfiI GAWTC 7 cut(s) 119, 454, 875, 941, 1501, 1694, 1927
Tru1I TTAA 8 cut(s) 278, 426, 438, 567, 1032, 1346, 1409, 1562
Tru9I TTAA 8 cut(s) 278, 426, 438, 567, 1032, 1346, 1409, 1562
TscAI CASTG 5 cut(s) 822, 927, 1503, 1644, 1937
TseFI GTSAC 1 cut(s) 303
TseI GCWGC 2 cut(s) 1804, 1868
Tsp45I GTSAC 1 cut(s) 303
TspDTI ATGAA 8 cut(s) 176, 671, 728, 867, 883, 1164, 1448, 1692
TspRI CASTG 5 cut(s) 822, 927, 1503, 1644, 1937
Van91I CCANNNNNTGG 1 cut(s) 1460
Vha464I CTTAAG 2 cut(s) 425, 437
VpaK11BI GGWCC 2 cut(s) 1463, 1542
XagI CCTNNNNNAGG 2 cut(s) 86, 1536
XapI RAATTY 7 cut(s) 256, 373, 553, 576, 1027, 1386, 1446
XmiI GTMKAC 1 cut(s) 72
XmnI GAANNNNTTC 5 cut(s) 576, 678, 735, 890, 1165
XspI CTAG 1 cut(s) 1755
ZrmI AGTACT 1 cut(s) 1753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.