Rh1AG286700

UV-stimulated scaffold protein A homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0014390
Physical Location & Seq
Reverse (-)
51558447 .. 51561335
2889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG286700.1

Sequence Viewer

Length: 1971 bp
ATGGAGGAAGAAGAAGAGGGAGGAAGAGGAGGAGGGAAGGTTAGGGTTTTGATCGAGAAGGCAACGGAGTCAATCGAACCAGAGGTCGACCCCAGCCTCCTCAAGGCCATCAAGGCCGGCGTCCGCCGCTCCGATTCCGAGCTCCGACTCGCCGCCCATCTTCTCATGGACCTCATGAAGCGCGACCACTCTCAGGTGAGGTATTTAACGCTGCTGATAATTGATGAGCTTTTTATGCGGTCAAAGCTGTTTAGAGGCCTTGTGGTTGAGAATATGGATCAGTTGTTGACGTTAAGCGTCGGGTTTAGAAGGAATTTGCCACTGCCAGCTCCGGCAAATGTTGCGGCTACTCTGCGTTTGAAGGCGATTGAGTTTTTGGAGAAGTGGAATGCTTCGTATGGTGTTCATTATAGGCAGATTAGGTTAGGGTTTGAGTACCTTAAGAACACGCTTAAGTTTCAGTTCCCGAATCTACAGGCAAATGCGGCGCGGGTTCAGCAGGAGAGGAGGGAGAGGGAGAGGAAGTCGAAGGAGATTTTGCTGAAGAAGTTTCAGAGTTTGGAGAGGAGTTTTGGATCGATAAAGGAAGAGATACAGTCGACGGTTGATGAGATTGGGGAGTGTTTAGAAATTGCACGTGCTAAAGAGGAACATTCAAAGTTTATTCCTTTAGATGATGAAGATTTTGAAGAGATTCATTCTTATGAGTTACGGCAGTTGCGTTTGCAAACGTTGGAAGAAGAAGATAAAATTCATGAGAATACTGAAAACAAAGTGGTTTTTGATGCACTCAGGGAGCTTTACAAGCTTTTGTTAACAAAGCATTTGGTTGCGGTCCAAGAATGGATAACTGTTCTTGTAAGGGTTGAACTGAATGATAACAGGTCCAGAGATTCTTATTTGAAGGAGTTCATTGATATCCAGAATCATATTCAGTCAGTCAAGAAGAAGTGTGAAGAATCAGGTTGCACTCTTCTAAACGCTGCAAATCCTGATGAAGAAGATTTTTGGGAGGAAGGCAATATTGGATCAGTTGAGACTGGGAGTTCTAGTCGTCCCAGTAACAACATTGAAGATCTTGCTGGGACATCCACATGCACATCTACATCTACATCCAATGAGGTAAAAGAGAGAATTTCTAAAGCACATGGTAATGTGACAAACAGCAAAAAAACTCGCAGTCGTGAAGGTGGTGTAGCCAAGTTAGATCCTCTGAAGAGTAAGCTTTTGGCTGAAGCTCCAGAGGTGAACTGGGGCTCTTATTTGGATAACTGGGGTTCAAAGAGAGATGTATTGGCTAACCACCGGGGTTTGGAGCTTGAAAGTCATTGGGGCAGAGTAGATCAGGATGCAGTTATCCCAGCAGATAAGATTGCAGAGTTAAATCTTCAGGCTACTGTATACAAAGAAAAGCAAGTTGATATTCCACCATGCCGAGCTCCATTAAGTAATGGAAAACTTTGTCAGAGAAAAGACTTGAGAATTTGTCCATTTCATGGACCCATTATTCCCAGAGATGATGAGGGGAATCCTCTGAATCAGAACCCTTCTATAGATGAGACAACTCTGGATACAGGGGCCACAGGGGACAATCTAGTAGAGCAGTTGGCGAAACAAGCCGTGAAGAATGTTCGTGAGAAAGATAAAGAGTTAGCAAGGAAGAGAGAAATTGATAAACAGGCACTGAAGCGTGCAAAGCTTGCGAAAGTACGAGAACACAATGATTTGGTTTTACGTGATGCTGCTATGGCTTCGACTTCTAGATCTGCAGCCATTGGCGAAGATTTGGAGGCAAACTCATCATCCAGAAACAAAAAGAAAACCCTTGCAGCCATGCTGAAGAAGAAAGAAACGCCAAAAGATAGATTAGGTCAGAGGCTTTTAAACACACGAGCGAGTGCTGCCACTGTAAGACAGCTTACCTTGGGGGCGGATACTAATTACAGAGAAGCCTTCCCGAATCAGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2043

Protein Analysis

656

Amino Acids

74.42

Weight (kDa)

6.93

Isoelectric Point (pI)

45.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVSSA_N PF20867 14 - 150 2.1e-36 UVSSA N-terminal domain
DUF2043 PF09740 412 - 514 1.1e-31 Uncharacterized conserved protein (DUF2043)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014390)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61800 AT3G61800
fragaria_vesca FvH4_7g16650
malus_domestica MD01G1082100.v1.1 MD07G1150500.v1.1
prunus_persica Prupe.2G189300_v2.0.a1
pyrus_communis pycom07g14900
rosa_chinensis RchiOBHm_Chr1g0359811
rosa_laevigata RLG00000027852
rosa_multiflora Rmu_ssc0000371.1_g000006
rosa_roxburghii Rroxscaffold_4G00296810
rosa_rugosa Rorug01G0272800
rosa_samantha Rh1AG286700 Rh1BG252600 Rh1CG269800 Rh1DG281600
rosa_wichuraiana Rw1G025460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1496
AccBSI CCGCTC 1 cut(s) 129
AccI GTMKAC 3 cut(s) 87, 599, 1401
AccII CGCG 2 cut(s) 183, 490
AciI CCGC 9 cut(s) 124, 127, 153, 238, 344, 485, 490, 833, 1931
AclI AACGTT 1 cut(s) 731
AclWI GGATC 4 cut(s) 285, 583, 1036, 1202
AcsI RAATTY 4 cut(s) 313, 750, 1134, 1482
AcuI CTGAAG 6 cut(s) 563, 1235, 1254, 1373, 1706, 1859
AcvI CACGTG 1 cut(s) 638
AcyI GRCGYC 1 cut(s) 120
AfaI GTAC 2 cut(s) 437, 1710
AfiI CCNNNNNNNGG 4 cut(s) 103, 193, 1312, 1496
AflII CTTAAG 2 cut(s) 440, 452
AgsI TTSAA 8 cut(s) 361, 657, 689, 869, 904, 1073, 1281, 1322
AjuI GAANNNNNNNTTGG 2 cut(s) 1008, 1040
Alw21I GWGCWC 2 cut(s) 144, 1441
Alw26I GTCTC 2 cut(s) 1031, 1553
AlwI GGATC 4 cut(s) 285, 583, 1036, 1202
AlwNI CAGNNNCTG 1 cut(s) 1684
AoxI GGCC 4 cut(s) 105, 114, 256, 1578
ApeKI GCWGC 6 cut(s) 211, 983, 1742, 1769, 1829, 1901
ApoI RAATTY 4 cut(s) 313, 750, 1134, 1482
ArsI GACNNNNNNTTYG 2 cut(s) 69, 101
Asp700I GAANNNNTTC 2 cut(s) 693, 908
AspLEI GCGC 2 cut(s) 183, 490
AspS9I GGNCC 5 cut(s) 169, 835, 885, 1499, 1578
AsuC2I CCSGG 1 cut(s) 1307
AsuHPI GGTGA 2 cut(s) 208, 1258
AvaII GGWCC 4 cut(s) 169, 835, 885, 1499
BanII GRGCYC 3 cut(s) 144, 1259, 1441
BauI CACGAG 1 cut(s) 1890
BbrPI CACGTG 1 cut(s) 638
Bbv12I GWGCWC 2 cut(s) 144, 1441
BbvI GCAGC 6 cut(s) 198, 970, 1729, 1781, 1841, 1888
BccI CCATC 2 cut(s) 116, 165
BceAI ACGGC 2 cut(s) 728, 1604
BciVI GTATCC 2 cut(s) 1564, 1927
BcnI CCSGG 1 cut(s) 1307
BcoDI GTCTC 2 cut(s) 1031, 1553
BfaI CTAG 3 cut(s) 1050, 1595, 1761
BfmI CTRYAG 3 cut(s) 473, 1551, 1767
BfrI CTTAAG 2 cut(s) 440, 452
BfuI GTATCC 2 cut(s) 1564, 1927
BglI GCCNNNNNGGC 1 cut(s) 113
BglII AGATCT 2 cut(s) 1075, 1763
Bme1390I CCNGG 1 cut(s) 1307
Bme18I GGWCC 4 cut(s) 169, 835, 885, 1499
BmgT120I GGNCC 5 cut(s) 169, 835, 885, 1499, 1578
BmiI GGNNCC 2 cut(s) 1501, 1579
BmrFI CCNGG 1 cut(s) 1307
BmrI ACTGGG 4 cut(s) 1050, 1053, 1261, 1282
BmsI GCATC 3 cut(s) 775, 1339, 1729
BmuI ACTGGG 4 cut(s) 1050, 1053, 1261, 1282
BplI GAGNNNNNCTC 2 cut(s) 1781, 1813
BpmI CTGGAG 1 cut(s) 1224
BpuEI CTTGAG 2 cut(s) 86, 1498
BpuMI CCSGG 1 cut(s) 1307
Bsa29I ATCGAT 1 cut(s) 578
BsaAI YACGTR 2 cut(s) 638, 1736
BsaHI GRCGYC 1 cut(s) 120
BsaJI CCNNGG 2 cut(s) 1306, 1923
BsaXI ACNNNNNCTCC 6 cut(s) 24, 54, 509, 539, 1036, 1066
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 193, 1312, 1496
Bse118I RCCGGY 1 cut(s) 116
Bse1I ACTGG 4 cut(s) 1045, 1059, 1256, 1277
BseCI ATCGAT 1 cut(s) 578
BseDI CCNNGG 2 cut(s) 1306, 1923
BseGI GGATG 4 cut(s) 1088, 1112, 1354, 1802
BseLI CCNNNNNNNGG 4 cut(s) 103, 193, 1312, 1496
BseMII CTCAG 2 cut(s) 206, 805
BseNI ACTGG 4 cut(s) 1045, 1059, 1256, 1277
BseRI GAGGAG 5 cut(s) 42, 45, 89, 520, 580
BseXI GCAGC 6 cut(s) 198, 970, 1729, 1781, 1841, 1888
BseYI CCCAGC 3 cut(s) 92, 1082, 1360
Bsh1236I CGCG 2 cut(s) 183, 490
BshFI GGCC 4 cut(s) 107, 116, 258, 1580
BshVI ATCGAT 1 cut(s) 578
BsiHKAI GWGCWC 2 cut(s) 144, 1441
BsiSI CCGG 3 cut(s) 117, 332, 1306
BslFI GGGAC 3 cut(s) 1041, 1099, 1601
BslI CCNNNNNNNGG 4 cut(s) 103, 193, 1312, 1496
BsmAI GTCTC 2 cut(s) 1031, 1553
BsmFI GGGAC 3 cut(s) 1041, 1099, 1601
BsmI GAATGC 1 cut(s) 394
BsnI GGCC 4 cut(s) 107, 116, 258, 1580
Bsp1286I GDGCHC 3 cut(s) 144, 1259, 1441
Bsp143I GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1207, 1342, 1763
BspACI CCGC 9 cut(s) 124, 127, 153, 238, 344, 485, 490, 833, 1931
BspANI GGCC 4 cut(s) 107, 116, 258, 1580
BspCNI CTCAG 2 cut(s) 205, 804
BspDI ATCGAT 1 cut(s) 578
BspFNI CGCG 2 cut(s) 183, 490
BspHI TCATGA 2 cut(s) 174, 754
BspLI GGNNCC 2 cut(s) 1501, 1579
BspMAI CTGCAG 1 cut(s) 1771
BspPI GGATC 4 cut(s) 285, 583, 1036, 1202
BspTI CTTAAG 2 cut(s) 440, 452
BsrBI CCGCTC 1 cut(s) 129
BsrFI RCCGGY 1 cut(s) 116
BsrI ACTGG 4 cut(s) 1045, 1059, 1256, 1277
BssAI RCCGGY 1 cut(s) 116
BssECI CCNNGG 2 cut(s) 1306, 1923
BssMI GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1207, 1342, 1763
BssNAI GTATAC 1 cut(s) 1402
BssNI GRCGYC 1 cut(s) 120
BssSI CACGAG 1 cut(s) 1890
BssT1I CCWWGG 1 cut(s) 1923
Bst1107I GTATAC 1 cut(s) 1402
Bst2BI CACGAG 1 cut(s) 1890
Bst4CI ACNGT 5 cut(s) 597, 604, 853, 1399, 1909
Bst6I CTCTTC 7 cut(s) 9, 19, 582, 684, 978, 1211, 1655
BstACI GRCGYC 1 cut(s) 120
BstAFI CTTAAG 2 cut(s) 440, 452
BstAPI GCANNNNNTGC 2 cut(s) 341, 1700
BstBAI YACGTR 2 cut(s) 638, 1736
BstC8I GCNNGC 4 cut(s) 118, 327, 1692, 1701
BstDEI CTNAG 2 cut(s) 192, 791
BstENI CCTNNNNNAGG 1 cut(s) 101
BstF5I GGATG 4 cut(s) 1088, 1112, 1354, 1802
BstFNI CGCG 2 cut(s) 183, 490
BstHHI GCGC 2 cut(s) 183, 490
BstKTI GATC 8 cut(s) 54, 280, 578, 1031, 1078, 1210, 1345, 1766
BstMAI GTCTC 2 cut(s) 1031, 1553
BstMBI GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1207, 1342, 1763
BstNSI RCATGY 1 cut(s) 1098
BstSCI CCNGG 1 cut(s) 1305
BstSFI CTRYAG 3 cut(s) 473, 1551, 1767
BstUI CGCG 2 cut(s) 183, 490
BstV1I GCAGC 6 cut(s) 198, 970, 1729, 1781, 1841, 1888
BstX2I RGATCY 3 cut(s) 1075, 1207, 1763
BstYI RGATCY 3 cut(s) 1075, 1207, 1763
BstZ17I GTATAC 1 cut(s) 1402
Bsu15I ATCGAT 1 cut(s) 578
BsuI GTATCC 2 cut(s) 1564, 1927
BsuRI GGCC 4 cut(s) 107, 116, 258, 1580
BsuTUI ATCGAT 1 cut(s) 578
BtsCI GGATG 4 cut(s) 1088, 1112, 1354, 1802
BtsI GCAGTG 1 cut(s) 320
BtsIMutI CAGTG 4 cut(s) 320, 1682, 1905, 1970
Cac8I GCNNGC 4 cut(s) 118, 327, 1692, 1701
CaiI CAGNNNCTG 1 cut(s) 1684
CciI TCATGA 2 cut(s) 174, 754
CfoI GCGC 2 cut(s) 183, 490
Cfr10I RCCGGY 1 cut(s) 116
Cfr13I GGNCC 5 cut(s) 169, 835, 885, 1499, 1578
ClaI ATCGAT 1 cut(s) 578
CseI GACGC 2 cut(s) 109, 286
Csp6I GTAC 2 cut(s) 436, 1709
CviAII CATG 8 cut(s) 166, 175, 755, 1095, 1148, 1431, 1496, 1834
CviQI GTAC 2 cut(s) 436, 1709
DdeI CTNAG 2 cut(s) 192, 791
DpnI GATC 8 cut(s) 53, 279, 577, 1030, 1077, 1209, 1344, 1765
DpnII GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1207, 1342, 1763
DraI TTTAAA 1 cut(s) 1884
Eam1104I CTCTTC 7 cut(s) 9, 19, 582, 684, 978, 1211, 1655
EarI CTCTTC 7 cut(s) 9, 19, 582, 684, 978, 1211, 1655
EciI GGCGGA 2 cut(s) 113, 1946
Ecl136II GAGCTC 2 cut(s) 142, 1439
Eco130I CCWWGG 1 cut(s) 1923
Eco147I AGGCCT 1 cut(s) 258
Eco24I GRGCYC 3 cut(s) 144, 1259, 1441
Eco32I GATATC 1 cut(s) 919
Eco47I GGWCC 4 cut(s) 169, 835, 885, 1499
Eco53kI GAGCTC 2 cut(s) 142, 1439
Eco57I CTGAAG 6 cut(s) 563, 1235, 1254, 1373, 1706, 1859
Eco72I CACGTG 1 cut(s) 638
EcoICRI GAGCTC 2 cut(s) 142, 1439
EcoNI CCTNNNNNAGG 1 cut(s) 101
EcoRV GATATC 1 cut(s) 919
EcoT14I CCWWGG 1 cut(s) 1923
EcoT38I GRGCYC 3 cut(s) 144, 1259, 1441
ErhI CCWWGG 1 cut(s) 1923
FaeI CATG 8 cut(s) 169, 178, 758, 1098, 1151, 1434, 1499, 1837
FaqI GGGAC 3 cut(s) 1041, 1099, 1601
FatI CATG 8 cut(s) 165, 174, 754, 1094, 1147, 1430, 1495, 1833
FauI CCCGC 1 cut(s) 483
FblI GTMKAC 3 cut(s) 87, 599, 1401
FokI GGATG 4 cut(s) 1075, 1099, 1361, 1789
FriOI GRGCYC 3 cut(s) 144, 1259, 1441
FspBI CTAG 3 cut(s) 1050, 1595, 1761
GlaI GCGC 2 cut(s) 182, 489
GsaI CCCAGC 3 cut(s) 96, 1086, 1364
GsuI CTGGAG 1 cut(s) 1224
HaeIII GGCC 4 cut(s) 107, 116, 258, 1580
HapII CCGG 3 cut(s) 117, 332, 1306
HgaI GACGC 2 cut(s) 109, 286
HhaI GCGC 2 cut(s) 183, 490
Hin1I GRCGYC 1 cut(s) 120
Hin1II CATG 8 cut(s) 169, 178, 758, 1098, 1151, 1434, 1499, 1837
Hin6I GCGC 2 cut(s) 181, 488
HinP1I GCGC 2 cut(s) 181, 488
HincII GTYRAC 4 cut(s) 88, 288, 600, 816
HindII GTYRAC 4 cut(s) 88, 288, 600, 816
HindIII AAGCTT 3 cut(s) 806, 1223, 1697
HpaI GTTAAC 1 cut(s) 816
HpaII CCGG 3 cut(s) 117, 332, 1306
HphI GGTGA 2 cut(s) 208, 1258
Hpy166II GTNNAC 6 cut(s) 88, 288, 600, 816, 1249, 1402
Hpy188I TCNGA 9 cut(s) 133, 139, 146, 555, 1215, 1467, 1536, 1542, 1875
Hpy8I GTNNAC 6 cut(s) 88, 288, 600, 816, 1249, 1402
Hpy99I CGWCG 2 cut(s) 302, 604
HpyCH4III ACNGT 5 cut(s) 597, 604, 853, 1399, 1909
HpyCH4IV ACGT 4 cut(s) 290, 637, 731, 1735
HpyF3I CTNAG 2 cut(s) 192, 791
HpySE526I ACGT 4 cut(s) 290, 637, 731, 1735
Hsp92I GRCGYC 1 cut(s) 120
Hsp92II CATG 8 cut(s) 169, 178, 758, 1098, 1151, 1434, 1499, 1837
HspAI GCGC 2 cut(s) 181, 488
KroI GCCGGC 1 cut(s) 116
KroNI GCCGGC 1 cut(s) 118
KspAI GTTAAC 1 cut(s) 816
Kzo9I GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1207, 1342, 1763
LmnI GCTCC 7 cut(s) 134, 147, 334, 796, 1243, 1315, 1444
Lsp1109I GCAGC 6 cut(s) 198, 970, 1729, 1781, 1841, 1888
LweI GCATC 3 cut(s) 775, 1339, 1729
MaeI CTAG 3 cut(s) 1050, 1595, 1761
MaeII ACGT 4 cut(s) 290, 637, 731, 1735
MaeIII GTNAC 3 cut(s) 708, 1061, 1156
MalI GATC 8 cut(s) 53, 279, 577, 1030, 1077, 1209, 1344, 1765
MbiI CCGCTC 1 cut(s) 129
MboI GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1207, 1342, 1763
MflI RGATCY 3 cut(s) 1075, 1207, 1763
MhlI GDGCHC 3 cut(s) 144, 1259, 1441
MluCI AATT 8 cut(s) 219, 313, 630, 750, 1134, 1482, 1668, 1939
MlyI GAGTC 2 cut(s) 77, 141
MmeI TCCRAC 2 cut(s) 169, 714
MroNI GCCGGC 1 cut(s) 116
MroXI GAANNNNTTC 2 cut(s) 693, 908
MseI TTAA 8 cut(s) 206, 293, 441, 453, 815, 1382, 1445, 1883
MslI CAYNNNNRTG 3 cut(s) 702, 1093, 1152
MspCI CTTAAG 2 cut(s) 440, 452
MspI CCGG 3 cut(s) 117, 332, 1306
MspR9I CCNGG 1 cut(s) 1307
Mva1269I GAATGC 1 cut(s) 394
MvnI CGCG 2 cut(s) 183, 490
NaeI GCCGGC 1 cut(s) 118
NciI CCSGG 1 cut(s) 1307
NdeII GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1207, 1342, 1763
NgoMIV GCCGGC 1 cut(s) 116
NlaIII CATG 8 cut(s) 169, 178, 758, 1098, 1151, 1434, 1499, 1837
NlaIV GGNNCC 2 cut(s) 1501, 1579
NmeAIII GCCGAG 1 cut(s) 1460
NmuCI GTSAC 1 cut(s) 1156
NspI RCATGY 1 cut(s) 1098
PagI TCATGA 2 cut(s) 174, 754
PceI AGGCCT 1 cut(s) 258
PcsI WCGNNNNNNNCGW 1 cut(s) 718
PctI GAATGC 1 cut(s) 394
PdiI GCCGGC 1 cut(s) 118
PdmI GAANNNNTTC 2 cut(s) 693, 908
PfeI GAWTC 9 cut(s) 134, 469, 694, 893, 925, 959, 1528, 1537, 1960
PflMI CCANNNNNTGG 1 cut(s) 1496
PleI GAGTC 2 cut(s) 76, 141
PmaCI CACGTG 1 cut(s) 638
PmlI CACGTG 1 cut(s) 638
PpsI GAGTC 2 cut(s) 76, 141
Ppu21I YACGTR 2 cut(s) 638, 1736
Psp124BI GAGCTC 2 cut(s) 144, 1441
Psp1406I AACGTT 1 cut(s) 731
PspCI CACGTG 1 cut(s) 638
PspFI CCCAGC 3 cut(s) 92, 1082, 1360
PspN4I GGNNCC 2 cut(s) 1501, 1579
PspPI GGNCC 5 cut(s) 169, 835, 885, 1499, 1578
PstI CTGCAG 1 cut(s) 1771
PstNI CAGNNNCTG 1 cut(s) 1684
PsuI RGATCY 3 cut(s) 1075, 1207, 1763
RsaI GTAC 2 cut(s) 437, 1710
RsaNI GTAC 2 cut(s) 436, 1709
RseI CAYNNNNRTG 3 cut(s) 702, 1093, 1152
SacI GAGCTC 2 cut(s) 144, 1441
SalI GTCGAC 2 cut(s) 86, 598
SaqAI TTAA 8 cut(s) 206, 293, 441, 453, 815, 1382, 1445, 1883
Sau3AI GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1207, 1342, 1763
Sau96I GGNCC 5 cut(s) 169, 835, 885, 1499, 1578
SchI GAGTC 2 cut(s) 77, 141
ScrFI CCNGG 1 cut(s) 1307
SduI GDGCHC 3 cut(s) 144, 1259, 1441
SfaNI GCATC 3 cut(s) 775, 1339, 1729
SfcI CTRYAG 3 cut(s) 473, 1551, 1767
SfiI GGCCNNNNNGGCC 1 cut(s) 113
SinI GGWCC 4 cut(s) 169, 835, 885, 1499
SmiMI CAYNNNNRTG 3 cut(s) 702, 1093, 1152
SmlI CTYRAG 4 cut(s) 101, 440, 452, 1477
SmoI CTYRAG 4 cut(s) 101, 440, 452, 1477
Sse9I AATT 8 cut(s) 219, 313, 630, 750, 1134, 1482, 1668, 1939
SseBI AGGCCT 1 cut(s) 258
SsiI CCGC 9 cut(s) 124, 127, 153, 238, 344, 485, 490, 833, 1931
SspI AATATT 1 cut(s) 1024
SspMI CTAG 3 cut(s) 1050, 1595, 1761
SstI GAGCTC 2 cut(s) 144, 1441
StuI AGGCCT 1 cut(s) 258
StyD4I CCNGG 1 cut(s) 1305
StyI CCWWGG 1 cut(s) 1923
TaaI ACNGT 5 cut(s) 597, 604, 853, 1399, 1909
TaiI ACGT 4 cut(s) 293, 640, 734, 1738
TaqI TCGA 7 cut(s) 54, 75, 87, 527, 578, 599, 1754
TasI AATT 8 cut(s) 219, 313, 630, 750, 1134, 1482, 1668, 1939
TauI GCSGC 4 cut(s) 129, 155, 347, 488
TfiI GAWTC 9 cut(s) 134, 469, 694, 893, 925, 959, 1528, 1537, 1960
Tru1I TTAA 8 cut(s) 206, 293, 441, 453, 815, 1382, 1445, 1883
Tru9I TTAA 8 cut(s) 206, 293, 441, 453, 815, 1382, 1445, 1883
TscAI CASTG 4 cut(s) 327, 1689, 1912, 1970
TseFI GTSAC 1 cut(s) 1156
TseI GCWGC 6 cut(s) 211, 983, 1742, 1769, 1829, 1901
Tsp45I GTSAC 1 cut(s) 1156
TspDTI ATGAA 8 cut(s) 191, 395, 686, 693, 743, 901, 1011, 1484
TspGWI ACGGA 1 cut(s) 80
TspRI CASTG 4 cut(s) 327, 1689, 1912, 1970
Van91I CCANNNNNTGG 1 cut(s) 1496
Vha464I CTTAAG 2 cut(s) 440, 452
VpaK11BI GGWCC 4 cut(s) 169, 835, 885, 1499
XagI CCTNNNNNAGG 1 cut(s) 101
XapI RAATTY 4 cut(s) 313, 750, 1134, 1482
XbaI TCTAGA 1 cut(s) 1760
XceI RCATGY 1 cut(s) 1098
XcmI CCANNNNNNNNNTGG 1 cut(s) 1248
XmiI GTMKAC 3 cut(s) 87, 599, 1401
XmnI GAANNNNTTC 2 cut(s) 693, 908
XspI CTAG 3 cut(s) 1050, 1595, 1761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.