RchiOBHm_Chr1g0359811

UV-stimulated scaffold protein A homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0014390
Physical Location & Seq
Reverse (-)
51640482 .. 51643000
2519 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58484

Sequence Viewer

Length: 1983 bp
ATGGAGGAAGAAGAAGAGGGAGGAAGAGGAGGAGGGAAGGTTAGGGTTTTGATCGAGAAGGCAACGGAGTCAATCGAACCAGAGGTCGACCCCAGCCTCCTCAAGGCAATCAAGGCCGTCGTCCGCCGCTCCGATTCCGAGCTCCGACTCGCCGCCCATCTTCTCATGGACCTCATGAAGCGCGACCACTCTCAGGTGAGGTATTTAACGCTGCTGATAATTGATGAGCTTTTTATGCGGTCGAAGCTGTTTAGAGGCCTTGTGGTTGAGAATATGGATCAGTTGTTGACGTTAAGCGTCGGGTTTAGAAGGAATTTGCCACTGCCAGCTCCGGCAAATGTTGCGGCTACTCTGCGTTTGAAGGCGATTGAGTTTTTGGAGAAGTGGAATGCTTCGTATGGTGTTCATTATAGGCAGATTAGGTTAGGGTTTGAGTACCTTAAGAACACGCTTAAGTTTCAGTTCCCGAATCTACAGGCAAATGCGGCGCGGGTTCAGCAGGAGAGGAGGGAGAGGGAGAGGAAGTCGAAGGAGATTTTGCTGAAGAAGTTTCAGAGTTTGGAGAGGAGTTTTGGATCAATAAAGGAAGAGATACAATCGACGGTTGATGAGATTGGGGAGTGTTTAGAAATTGCACGTGCTAAAGAGGAACATTCAAAGTTTATTCCTTTAGATGATGAAGATTTTGAAGAGATTCATTCTTATGAGTTACGGCAGTTGCGTTTGCAAACGTTGGAAGAAGAAGATAAAATTCATGAGAATACTGAAAACAAAGTGGTTTTTGATGCACTCAGGGAGCTTTACAAGCTTTTGTTAACAAAGCATTTGGTTGCGGTCCAAGAATGGATAACTGTTCTTGTAAGGGTTGAACTGAATGATAACAGGTCCAGAGATTCCTATTTGAAGGAGTTCATTGATATCCAGAATCATATTCAGTCAGTCAAGAAGAAGTGTGAAGAATCAGGTTGCACTCTTCTAAACACTGCAAATCCTGATGAAGAAGATTTTTGGGAGGAAGGCAATATCGGATCAGTTGAGACTGGGAGTTCTAGTCGTCCCAGTAACAACATTGAAGATCTTGCTGGGACATCCACATGCACATCTACATGTACATCTACATCTACATTCAATGAGGTAAAAGAGAGAATTTCTAAAGCACATGGTAATGTGACAAACAGCAAAAAAACTCGCAGTCGTGAAGGTGGTGTAGCCAAGTTAGATCCTCTGAAGAGCAAGCTTTTGGCTGAAGCTCCAGAGGTGAACTGGGGCTCTTATTTGGATAACTGGGGTTCAAAGAGAGATGTATTGGCTAACCACCGGGGTTTGGAGCTTGAAAGTCATTGGGGCAGAGTAGATCAGGATGCAGTTATCCCAGCAGATAAGATTGCAGAGTTAAATCTTCAGGCTACTGTATACAAAGAAAAGCAAGTTGATATTCCACCATGCCGAGCTCCATTAAGTAATGGAAAACTTTGTCAGAGAAAAGACTTGAGAATTTGTCCATTTCATGGACCCATTATTCCCAGAGATGATGAGGGGAAGCCTCTGAATCAGAACCCTTCTATGGATGAGACAACTCTGGATACAGGGGCCACAGGGGACAATCTAGTAGAGCAGTTGGCGAAACAAGCCGTGAAGAATGTTCGTGAGAAAGATAAAGAGTTAGCAAGGAAGAGAGAAATTGATAAACAGGCACTGAAGCGTGCAAAGCTTGCGAAAGTACGAGAACACAATGATTTGGTTTTACGTGATGCTGCTATGGCTTCGACTTCTAGATCTGCAGCCATTGGCGAAGATTTGGAGGCAAACCCATCATCCAGAAACAAAAAGAAAACCCTTGCAGCCATGCTGAAGAAGAAAGAAACACCAAAAGATAGATTAGGTCAGAGGCTTTTAAACACACGAGCGAGTGCTGCCACTGTAAGACAGCTTACCTTGGGGGCGGATACTAATTACAGAGAAGCCTTCCCGAATCAGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2043

Protein Analysis

660

Amino Acids

74.99

Weight (kDa)

7.22

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVSSA_N PF20867 14 - 150 8.9e-37 UVSSA N-terminal domain
DUF2043 PF09740 416 - 518 1.1e-31 Uncharacterized conserved protein (DUF2043)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014390)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61800 AT3G61800
fragaria_vesca FvH4_7g16650
malus_domestica MD01G1082100.v1.1 MD07G1150500.v1.1
prunus_persica Prupe.2G189300_v2.0.a1
pyrus_communis pycom07g14900
rosa_chinensis RchiOBHm_Chr1g0359811
rosa_laevigata RLG00000027852
rosa_multiflora Rmu_ssc0000371.1_g000006
rosa_roxburghii Rroxscaffold_4G00296810
rosa_rugosa Rorug01G0272800
rosa_samantha Rh1AG286700 Rh1BG252600 Rh1CG269800 Rh1DG281600
rosa_wichuraiana Rw1G025460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1508
AccBSI CCGCTC 1 cut(s) 129
AccI GTMKAC 2 cut(s) 87, 1413
AccII CGCG 2 cut(s) 183, 490
AciI CCGC 9 cut(s) 124, 127, 153, 238, 344, 485, 490, 833, 1943
AclI AACGTT 1 cut(s) 731
AclWI GGATC 4 cut(s) 285, 583, 1036, 1214
AcsI RAATTY 4 cut(s) 313, 750, 1146, 1494
AcuI CTGAAG 6 cut(s) 563, 1247, 1266, 1385, 1718, 1871
AcvI CACGTG 1 cut(s) 638
AfaI GTAC 3 cut(s) 437, 1111, 1722
AfiI CCNNNNNNNGG 5 cut(s) 103, 193, 1324, 1508, 1564
AflII CTTAAG 2 cut(s) 440, 452
AflIII ACRYGT 1 cut(s) 1106
AgsI TTSAA 9 cut(s) 361, 657, 689, 869, 904, 1073, 1129, 1293, 1334
Alw21I GWGCWC 2 cut(s) 144, 1453
Alw26I GTCTC 2 cut(s) 1031, 1565
AlwI GGATC 4 cut(s) 285, 583, 1036, 1214
AlwNI CAGNNNCTG 1 cut(s) 1696
AoxI GGCC 3 cut(s) 114, 256, 1590
ApeKI GCWGC 5 cut(s) 211, 1754, 1781, 1841, 1913
ApoI RAATTY 4 cut(s) 313, 750, 1146, 1494
ArsI GACNNNNNNTTYG 2 cut(s) 69, 101
Asp700I GAANNNNTTC 2 cut(s) 693, 908
AspLEI GCGC 2 cut(s) 183, 490
AspS9I GGNCC 5 cut(s) 169, 835, 885, 1511, 1590
AsuC2I CCSGG 1 cut(s) 1319
AsuHPI GGTGA 2 cut(s) 208, 1270
AvaII GGWCC 4 cut(s) 169, 835, 885, 1511
BanII GRGCYC 3 cut(s) 144, 1271, 1453
BauI CACGAG 1 cut(s) 1902
BbrPI CACGTG 1 cut(s) 638
Bbv12I GWGCWC 2 cut(s) 144, 1453
BbvI GCAGC 5 cut(s) 198, 1741, 1793, 1853, 1900
BccI CCATC 2 cut(s) 165, 1819
BceAI ACGGC 3 cut(s) 101, 728, 1616
BciVI GTATCC 2 cut(s) 1576, 1939
BcnI CCSGG 1 cut(s) 1319
BcoDI GTCTC 2 cut(s) 1031, 1565
BfaI CTAG 3 cut(s) 1050, 1607, 1773
BfmI CTRYAG 2 cut(s) 473, 1779
BfrI CTTAAG 2 cut(s) 440, 452
BfuI GTATCC 2 cut(s) 1576, 1939
BglII AGATCT 2 cut(s) 1075, 1775
BisI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1755, 1782, 1842, 1914
BlsI GCNGC 9 cut(s) 128, 154, 213, 346, 487, 1756, 1783, 1843, 1915
Bme1390I CCNGG 1 cut(s) 1319
Bme18I GGWCC 4 cut(s) 169, 835, 885, 1511
BmgT120I GGNCC 5 cut(s) 169, 835, 885, 1511, 1590
BmiI GGNNCC 2 cut(s) 1513, 1591
BmrFI CCNGG 1 cut(s) 1319
BmrI ACTGGG 4 cut(s) 1050, 1053, 1273, 1294
BmsI GCATC 3 cut(s) 775, 1351, 1741
BmuI ACTGGG 4 cut(s) 1050, 1053, 1273, 1294
BpmI CTGGAG 1 cut(s) 1236
BpuEI CTTGAG 2 cut(s) 86, 1510
BpuMI CCSGG 1 cut(s) 1319
BsaAI YACGTR 2 cut(s) 638, 1748
BsaJI CCNNGG 2 cut(s) 1318, 1935
BsaXI ACNNNNNCTCC 6 cut(s) 24, 54, 509, 539, 1036, 1066
Bsc4I CCNNNNNNNGG 5 cut(s) 103, 193, 1324, 1508, 1564
Bse1I ACTGG 4 cut(s) 1045, 1059, 1268, 1289
BseDI CCNNGG 2 cut(s) 1318, 1935
BseGI GGATG 4 cut(s) 1088, 1366, 1573, 1814
BseLI CCNNNNNNNGG 5 cut(s) 103, 193, 1324, 1508, 1564
BseMII CTCAG 2 cut(s) 206, 805
BseNI ACTGG 4 cut(s) 1045, 1059, 1268, 1289
BseRI GAGGAG 5 cut(s) 42, 45, 89, 520, 580
BseXI GCAGC 5 cut(s) 198, 1741, 1793, 1853, 1900
BseYI CCCAGC 3 cut(s) 92, 1082, 1372
Bsh1236I CGCG 2 cut(s) 183, 490
Bsh1285I CGRYCG 1 cut(s) 242
BshFI GGCC 3 cut(s) 116, 258, 1592
BsiEI CGRYCG 1 cut(s) 242
BsiHKAI GWGCWC 2 cut(s) 144, 1453
BsiSI CCGG 2 cut(s) 332, 1318
BslFI GGGAC 3 cut(s) 1041, 1099, 1613
BslI CCNNNNNNNGG 5 cut(s) 103, 193, 1324, 1508, 1564
BsmAI GTCTC 2 cut(s) 1031, 1565
BsmFI GGGAC 3 cut(s) 1041, 1099, 1613
BsmI GAATGC 1 cut(s) 394
BsnI GGCC 3 cut(s) 116, 258, 1592
Bsp1286I GDGCHC 3 cut(s) 144, 1271, 1453
Bsp1407I TGTACA 1 cut(s) 1109
Bsp143I GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1219, 1354, 1775
BspACI CCGC 9 cut(s) 124, 127, 153, 238, 344, 485, 490, 833, 1943
BspANI GGCC 3 cut(s) 116, 258, 1592
BspCNI CTCAG 2 cut(s) 205, 804
BspFNI CGCG 2 cut(s) 183, 490
BspHI TCATGA 2 cut(s) 174, 754
BspLI GGNNCC 2 cut(s) 1513, 1591
BspMAI CTGCAG 1 cut(s) 1783
BspPI GGATC 4 cut(s) 285, 583, 1036, 1214
BspQI GCTCTTC 1 cut(s) 1223
BspTI CTTAAG 2 cut(s) 440, 452
BsrBI CCGCTC 1 cut(s) 129
BsrGI TGTACA 1 cut(s) 1109
BsrI ACTGG 4 cut(s) 1045, 1059, 1268, 1289
BssECI CCNNGG 2 cut(s) 1318, 1935
BssMI GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1219, 1354, 1775
BssNAI GTATAC 1 cut(s) 1414
BssSI CACGAG 1 cut(s) 1902
BssT1I CCWWGG 1 cut(s) 1935
Bst1107I GTATAC 1 cut(s) 1414
Bst2BI CACGAG 1 cut(s) 1902
Bst4CI ACNGT 4 cut(s) 604, 853, 1411, 1921
Bst6I CTCTTC 7 cut(s) 9, 19, 582, 684, 978, 1223, 1667
BstAFI CTTAAG 2 cut(s) 440, 452
BstAPI GCANNNNNTGC 2 cut(s) 341, 1712
BstAUI TGTACA 1 cut(s) 1109
BstBAI YACGTR 2 cut(s) 638, 1748
BstC8I GCNNGC 4 cut(s) 327, 1235, 1704, 1713
BstDEI CTNAG 2 cut(s) 192, 791
BstENI CCTNNNNNAGG 1 cut(s) 101
BstF5I GGATG 4 cut(s) 1088, 1366, 1573, 1814
BstFNI CGCG 2 cut(s) 183, 490
BstHHI GCGC 2 cut(s) 183, 490
BstKTI GATC 8 cut(s) 54, 280, 578, 1031, 1078, 1222, 1357, 1778
BstMAI GTCTC 2 cut(s) 1031, 1565
BstMBI GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1219, 1354, 1775
BstMCI CGRYCG 1 cut(s) 242
BstNSI RCATGY 2 cut(s) 1098, 1110
BstSCI CCNGG 1 cut(s) 1317
BstSFI CTRYAG 2 cut(s) 473, 1779
BstUI CGCG 2 cut(s) 183, 490
BstV1I GCAGC 5 cut(s) 198, 1741, 1793, 1853, 1900
BstX2I RGATCY 3 cut(s) 1075, 1219, 1775
BstYI RGATCY 3 cut(s) 1075, 1219, 1775
BstZ17I GTATAC 1 cut(s) 1414
BsuI GTATCC 2 cut(s) 1576, 1939
BsuRI GGCC 3 cut(s) 116, 258, 1592
BtsCI GGATG 4 cut(s) 1088, 1366, 1573, 1814
BtsI GCAGTG 2 cut(s) 320, 981
BtsIMutI CAGTG 5 cut(s) 320, 981, 1694, 1917, 1982
Cac8I GCNNGC 4 cut(s) 327, 1235, 1704, 1713
CaiI CAGNNNCTG 1 cut(s) 1696
CciI TCATGA 2 cut(s) 174, 754
CfoI GCGC 2 cut(s) 183, 490
Cfr13I GGNCC 5 cut(s) 169, 835, 885, 1511, 1590
CseI GACGC 1 cut(s) 286
Csp6I GTAC 3 cut(s) 436, 1110, 1721
CviAII CATG 9 cut(s) 166, 175, 755, 1095, 1107, 1160, 1443, 1508, 1846
CviQI GTAC 3 cut(s) 436, 1110, 1721
DdeI CTNAG 2 cut(s) 192, 791
DpnI GATC 8 cut(s) 53, 279, 577, 1030, 1077, 1221, 1356, 1777
DpnII GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1219, 1354, 1775
DraI TTTAAA 1 cut(s) 1896
Eam1104I CTCTTC 7 cut(s) 9, 19, 582, 684, 978, 1223, 1667
EarI CTCTTC 7 cut(s) 9, 19, 582, 684, 978, 1223, 1667
EciI GGCGGA 2 cut(s) 113, 1958
Ecl136II GAGCTC 2 cut(s) 142, 1451
Eco130I CCWWGG 1 cut(s) 1935
Eco147I AGGCCT 1 cut(s) 258
Eco24I GRGCYC 3 cut(s) 144, 1271, 1453
Eco32I GATATC 1 cut(s) 919
Eco47I GGWCC 4 cut(s) 169, 835, 885, 1511
Eco53kI GAGCTC 2 cut(s) 142, 1451
Eco57I CTGAAG 6 cut(s) 563, 1247, 1266, 1385, 1718, 1871
Eco72I CACGTG 1 cut(s) 638
EcoICRI GAGCTC 2 cut(s) 142, 1451
EcoNI CCTNNNNNAGG 1 cut(s) 101
EcoRV GATATC 1 cut(s) 919
EcoT14I CCWWGG 1 cut(s) 1935
EcoT38I GRGCYC 3 cut(s) 144, 1271, 1453
ErhI CCWWGG 1 cut(s) 1935
FaeI CATG 9 cut(s) 169, 178, 758, 1098, 1110, 1163, 1446, 1511, 1849
FaqI GGGAC 3 cut(s) 1041, 1099, 1613
FatI CATG 9 cut(s) 165, 174, 754, 1094, 1106, 1159, 1442, 1507, 1845
FauI CCCGC 1 cut(s) 483
FblI GTMKAC 2 cut(s) 87, 1413
Fnu4HI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1755, 1782, 1842, 1914
FokI GGATG 4 cut(s) 1075, 1373, 1580, 1801
FriOI GRGCYC 3 cut(s) 144, 1271, 1453
Fsp4HI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1755, 1782, 1842, 1914
FspBI CTAG 3 cut(s) 1050, 1607, 1773
GlaI GCGC 2 cut(s) 182, 489
GluI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1755, 1782, 1842, 1914
GsaI CCCAGC 3 cut(s) 96, 1086, 1376
GsuI CTGGAG 1 cut(s) 1236
HaeIII GGCC 3 cut(s) 116, 258, 1592
HapII CCGG 2 cut(s) 332, 1318
HgaI GACGC 1 cut(s) 286
HhaI GCGC 2 cut(s) 183, 490
Hin1II CATG 9 cut(s) 169, 178, 758, 1098, 1110, 1163, 1446, 1511, 1849
Hin6I GCGC 2 cut(s) 181, 488
HinP1I GCGC 2 cut(s) 181, 488
HincII GTYRAC 3 cut(s) 88, 288, 816
HindII GTYRAC 3 cut(s) 88, 288, 816
HindIII AAGCTT 3 cut(s) 806, 1235, 1709
HpaI GTTAAC 1 cut(s) 816
HpaII CCGG 2 cut(s) 332, 1318
HphI GGTGA 2 cut(s) 208, 1270
Hpy166II GTNNAC 5 cut(s) 88, 288, 816, 1261, 1414
Hpy8I GTNNAC 5 cut(s) 88, 288, 816, 1261, 1414
Hpy99I CGWCG 3 cut(s) 122, 302, 604
HpyCH4III ACNGT 4 cut(s) 604, 853, 1411, 1921
HpyCH4IV ACGT 4 cut(s) 290, 637, 731, 1747
HpyF3I CTNAG 2 cut(s) 192, 791
HpySE526I ACGT 4 cut(s) 290, 637, 731, 1747
Hsp92II CATG 9 cut(s) 169, 178, 758, 1098, 1110, 1163, 1446, 1511, 1849
HspAI GCGC 2 cut(s) 181, 488
KspAI GTTAAC 1 cut(s) 816
Kzo9I GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1219, 1354, 1775
LguI GCTCTTC 1 cut(s) 1223
LmnI GCTCC 7 cut(s) 134, 147, 334, 796, 1255, 1327, 1456
Lsp1109I GCAGC 5 cut(s) 198, 1741, 1793, 1853, 1900
LweI GCATC 3 cut(s) 775, 1351, 1741
MaeI CTAG 3 cut(s) 1050, 1607, 1773
MaeII ACGT 4 cut(s) 290, 637, 731, 1747
MaeIII GTNAC 3 cut(s) 708, 1061, 1168
MalI GATC 8 cut(s) 53, 279, 577, 1030, 1077, 1221, 1356, 1777
MbiI CCGCTC 1 cut(s) 129
MboI GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1219, 1354, 1775
MflI RGATCY 3 cut(s) 1075, 1219, 1775
MhlI GDGCHC 3 cut(s) 144, 1271, 1453
MluCI AATT 8 cut(s) 219, 313, 630, 750, 1146, 1494, 1680, 1951
MlyI GAGTC 2 cut(s) 77, 141
MmeI TCCRAC 2 cut(s) 169, 714
MroXI GAANNNNTTC 2 cut(s) 693, 908
MseI TTAA 8 cut(s) 206, 293, 441, 453, 815, 1394, 1457, 1895
MslI CAYNNNNRTG 4 cut(s) 702, 1093, 1105, 1164
MspCI CTTAAG 2 cut(s) 440, 452
MspI CCGG 2 cut(s) 332, 1318
MspR9I CCNGG 1 cut(s) 1319
Mva1269I GAATGC 1 cut(s) 394
MvnI CGCG 2 cut(s) 183, 490
NciI CCSGG 1 cut(s) 1319
NdeII GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1219, 1354, 1775
NlaIII CATG 9 cut(s) 169, 178, 758, 1098, 1110, 1163, 1446, 1511, 1849
NlaIV GGNNCC 2 cut(s) 1513, 1591
NmeAIII GCCGAG 1 cut(s) 1472
NmuCI GTSAC 1 cut(s) 1168
NspI RCATGY 2 cut(s) 1098, 1110
PagI TCATGA 2 cut(s) 174, 754
PceI AGGCCT 1 cut(s) 258
PciI ACATGT 1 cut(s) 1106
PciSI GCTCTTC 1 cut(s) 1223
PcsI WCGNNNNNNNCGW 1 cut(s) 718
PctI GAATGC 1 cut(s) 394
PdmI GAANNNNTTC 2 cut(s) 693, 908
PfeI GAWTC 8 cut(s) 134, 469, 694, 893, 925, 959, 1549, 1972
PflMI CCANNNNNTGG 1 cut(s) 1508
PkrI GCNGC 9 cut(s) 128, 154, 213, 346, 487, 1756, 1783, 1843, 1915
PleI GAGTC 2 cut(s) 76, 141
PmaCI CACGTG 1 cut(s) 638
PmlI CACGTG 1 cut(s) 638
PpsI GAGTC 2 cut(s) 76, 141
Ppu21I YACGTR 2 cut(s) 638, 1748
PscI ACATGT 1 cut(s) 1106
Psp124BI GAGCTC 2 cut(s) 144, 1453
Psp1406I AACGTT 1 cut(s) 731
PspCI CACGTG 1 cut(s) 638
PspFI CCCAGC 3 cut(s) 92, 1082, 1372
PspN4I GGNNCC 2 cut(s) 1513, 1591
PspPI GGNCC 5 cut(s) 169, 835, 885, 1511, 1590
PstI CTGCAG 1 cut(s) 1783
PstNI CAGNNNCTG 1 cut(s) 1696
PsuI RGATCY 3 cut(s) 1075, 1219, 1775
RsaI GTAC 3 cut(s) 437, 1111, 1722
RsaNI GTAC 3 cut(s) 436, 1110, 1721
RseI CAYNNNNRTG 4 cut(s) 702, 1093, 1105, 1164
SacI GAGCTC 2 cut(s) 144, 1453
SalI GTCGAC 1 cut(s) 86
SapI GCTCTTC 1 cut(s) 1223
SaqAI TTAA 8 cut(s) 206, 293, 441, 453, 815, 1394, 1457, 1895
SatI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1755, 1782, 1842, 1914
Sau3AI GATC 8 cut(s) 51, 277, 575, 1028, 1075, 1219, 1354, 1775
Sau96I GGNCC 5 cut(s) 169, 835, 885, 1511, 1590
SchI GAGTC 2 cut(s) 77, 141
ScrFI CCNGG 1 cut(s) 1319
SduI GDGCHC 3 cut(s) 144, 1271, 1453
SfaNI GCATC 3 cut(s) 775, 1351, 1741
SfcI CTRYAG 2 cut(s) 473, 1779
SinI GGWCC 4 cut(s) 169, 835, 885, 1511
SmiMI CAYNNNNRTG 4 cut(s) 702, 1093, 1105, 1164
SmlI CTYRAG 4 cut(s) 101, 440, 452, 1489
SmoI CTYRAG 4 cut(s) 101, 440, 452, 1489
Sse9I AATT 8 cut(s) 219, 313, 630, 750, 1146, 1494, 1680, 1951
SseBI AGGCCT 1 cut(s) 258
SsiI CCGC 9 cut(s) 124, 127, 153, 238, 344, 485, 490, 833, 1943
SspMI CTAG 3 cut(s) 1050, 1607, 1773
SstI GAGCTC 2 cut(s) 144, 1453
StuI AGGCCT 1 cut(s) 258
StyD4I CCNGG 1 cut(s) 1317
StyI CCWWGG 1 cut(s) 1935
TaaI ACNGT 4 cut(s) 604, 853, 1411, 1921
TaiI ACGT 4 cut(s) 293, 640, 734, 1750
TaqI TCGA 7 cut(s) 54, 75, 87, 242, 527, 599, 1766
TasI AATT 8 cut(s) 219, 313, 630, 750, 1146, 1494, 1680, 1951
TatI WGTACW 1 cut(s) 1109
TauI GCSGC 4 cut(s) 129, 155, 347, 488
TfiI GAWTC 8 cut(s) 134, 469, 694, 893, 925, 959, 1549, 1972
Tru1I TTAA 8 cut(s) 206, 293, 441, 453, 815, 1394, 1457, 1895
Tru9I TTAA 8 cut(s) 206, 293, 441, 453, 815, 1394, 1457, 1895
TscAI CASTG 5 cut(s) 327, 988, 1701, 1924, 1982
TseFI GTSAC 1 cut(s) 1168
TseI GCWGC 5 cut(s) 211, 1754, 1781, 1841, 1913
Tsp45I GTSAC 1 cut(s) 1168
TspDTI ATGAA 8 cut(s) 191, 395, 686, 693, 743, 901, 1011, 1496
TspGWI ACGGA 1 cut(s) 80
TspRI CASTG 5 cut(s) 327, 988, 1701, 1924, 1982
Van91I CCANNNNNTGG 1 cut(s) 1508
Vha464I CTTAAG 2 cut(s) 440, 452
VpaK11BI GGWCC 4 cut(s) 169, 835, 885, 1511
XagI CCTNNNNNAGG 1 cut(s) 101
XapI RAATTY 4 cut(s) 313, 750, 1146, 1494
XbaI TCTAGA 1 cut(s) 1772
XceI RCATGY 2 cut(s) 1098, 1110
XcmI CCANNNNNNNNNTGG 1 cut(s) 1260
XmiI GTMKAC 2 cut(s) 87, 1413
XmnI GAANNNNTTC 2 cut(s) 693, 908
XspI CTAG 3 cut(s) 1050, 1607, 1773
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.