Rh1CG269800

UV-stimulated scaffold protein A homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0014390
Physical Location & Seq
Reverse (-)
53569649 .. 53572440
2792 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG269800.1

Sequence Viewer

Length: 1977 bp
ATGGAGGAAGAAGAAGAGGGAGGAAGAGGAGGAGGAGGAGGGAAGGTTAGGGTTTTGATCGAGAAGGCAACGGAGTCAATCGAACCAGAGGTCGACCCCAGCCTCCTCAAGGCCATCAAGGCCGTCGTCCGCCGCTCCGATTCCGAGCTCCGACTCGCCGCCCATCTTCTCATGGACCTCATGAAGCGCGACCACTCTCAGGTGAGGTATTTAACGCTGCTGATAATTGATGAGCTTTTTATGCGGTCGAAGCTGTTTAGAGGCCTTGTGGTTGAGAATATGGATCAGTTGCTGACGTTAAGCGTCGGGTTTAGAAGGAATTTGCCACTGCCAGCTCCGGCAAATGTTGCGGCTACTCTGCGTTTGAAGGCGATTGAGTTTTTGGAGAAGTGGAATGCTTCGTATGGTGTTCATTATAGGCAGATTAGGTTAGGGTTTGAGTACCTTAAGAACACGCTTAAGTTTCAGTTCCCGAATCTACAGGCAAATGCGGCGCGGGTTCAGCAGGAGAGGAGGGAGAGGGAGAGGAAGTCGAAGGAGATTTTGCTGAAGAAGTTTCAGAGTTTGGAGACGAGTTTTGGATCGATAAAGGAAGAGATACAGTCGACGGTTGATGAGATTGGGGAGTGTTTAGAAATTGCACGTGCTAAAGAGGAACATTCAAAGTTTATTCCTTTAGATGATGAAGATTTTGAAGAGATTCATTCTTATGAGTTACGGCAGTTGCGTTTGCAAACATTGGAAGAAGAAGATAAAATTCATGAGAATACTGAAAACAAAGTGGTTTTTGATGCACTCAGGGAGCTTTACAAGCTTTTGTTAACAAAGCATTTGGTAGCGGTCCAAGAATGGATAACTGTTCTTGTAAGGGTTGAACTGAATGATAACAGGTCCAGAGATTCCTATTTGAAGGAGTTCATTGATATCCAGAATCATATTCAGTCAGTCAAGAAGAAGTGTGAAGAATCAGGTTGCACTCTGCTAAACACTGCAAAACCTGATGAAGAAGATTTTTGGGAGGAAGGCAATACCGGATCAGTTGAGACTGGGAGTTCTAGTCGTCCCAGTAACAACATTGAAGATCTTGCTGGGACATCCACATGCACATCTACATCTACATCCAATGAGGTAAAAGAGAGAATTTCTAAAGCACATGGTAATGTGACAAACAGCAAAAAAACTTGCAGTCGTGAAGGTGGTGTAGCCAAGTTAGATCCTCTGAAGAGTAAGCTTTTGGCTGAAGCTCCAGAGGTGAACTGGGGCTCTTATTTGGATAACTGGGGTTCAAAGAGAGATGTATTGGCTAACCACCGGGGTTTGGAGCTTGAAAGTCATTGGGGCAGAGTAGATCAGGATGCAGTTATCCCAGCAGATAAGATTGCAGAGTTAAATCTTCAGGCTACTGTATACAAAGAAAAGCAAGTTGATATTCCACCATGCCGAGCTCCATTAAGTAATGGAAAACTTTGTCAGAGAAAAGACTTGAGAGTTTGTCCATTTCATGGACCTATTATTCCCAGAGATGATGAGGGGAAGCCTCTGAATCAGAACCCTTCTATAGATGAGACAACTCTGGATACAGGGGCCACAGGGGACAATCTAGTAGAGCAGTTGGCGAAACAAGCCGTGAAGAATGTTCGTGAGAAAGATAAAGAGTTAGCAAGGAAGAGAGAAATTGATAAACAGGCACTGAAGCGTGCAAAGCTTGTGAAAGTACGAGAACACAATGATTTGGTTTTACGTGATGCTGCTATGGCTTCGACTTCTAGATCTGCAGCTATTGGCGAAGATTTGGACGCAAACCCATCATCCAGAAACAAAAAGAAAACCCTTGCAGCCATGCTGAAGAAGAAAGAAACACCAAAAGATAGATTAGCTCAGAGGCTTTTAAACACACGAGCGAGTGCTGCCACTGTAAGACAGCTTACCTTGGGGGCGGATACTAATTACAGAGAAGCCTTCCCGAATCAGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2043

Protein Analysis

658

Amino Acids

74.54

Weight (kDa)

6.93

Isoelectric Point (pI)

43.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVSSA_N PF20867 16 - 152 8.8e-37 UVSSA N-terminal domain
DUF2043 PF09740 414 - 516 1.1e-31 Uncharacterized conserved protein (DUF2043)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014390)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61800 AT3G61800
fragaria_vesca FvH4_7g16650
malus_domestica MD01G1082100.v1.1 MD07G1150500.v1.1
prunus_persica Prupe.2G189300_v2.0.a1
pyrus_communis pycom07g14900
rosa_chinensis RchiOBHm_Chr1g0359811
rosa_laevigata RLG00000027852
rosa_multiflora Rmu_ssc0000371.1_g000006
rosa_roxburghii Rroxscaffold_4G00296810
rosa_rugosa Rorug01G0272800
rosa_samantha Rh1AG286700 Rh1BG252600 Rh1CG269800 Rh1DG281600
rosa_wichuraiana Rw1G025460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1502
AccBSI CCGCTC 1 cut(s) 135
AccI GTMKAC 3 cut(s) 93, 605, 1407
AccII CGCG 2 cut(s) 189, 496
AciI CCGC 9 cut(s) 130, 133, 159, 244, 350, 491, 496, 839, 1937
AclWI GGATC 4 cut(s) 291, 589, 1042, 1208
AcsI RAATTY 3 cut(s) 319, 756, 1140
AcuI CTGAAG 6 cut(s) 569, 1241, 1260, 1379, 1712, 1865
AcvI CACGTG 1 cut(s) 644
AfaI GTAC 2 cut(s) 443, 1716
AfiI CCNNNNNNNGG 4 cut(s) 109, 199, 1318, 1502
AflII CTTAAG 2 cut(s) 446, 458
AgsI TTSAA 8 cut(s) 367, 663, 695, 875, 910, 1079, 1287, 1328
Alw21I GWGCWC 2 cut(s) 150, 1447
Alw26I GTCTC 3 cut(s) 563, 1037, 1559
AlwI GGATC 4 cut(s) 291, 589, 1042, 1208
AlwNI CAGNNNCTG 2 cut(s) 292, 1690
AoxI GGCC 4 cut(s) 111, 120, 262, 1584
ApeKI GCWGC 5 cut(s) 217, 1748, 1775, 1835, 1907
ApoI RAATTY 3 cut(s) 319, 756, 1140
ArsI GACNNNNNNTTYG 2 cut(s) 75, 107
Asp700I GAANNNNTTC 2 cut(s) 699, 914
AspLEI GCGC 2 cut(s) 189, 496
AspS9I GGNCC 5 cut(s) 175, 841, 891, 1505, 1584
AsuC2I CCSGG 1 cut(s) 1313
AsuHPI GGTGA 2 cut(s) 214, 1264
AvaII GGWCC 4 cut(s) 175, 841, 891, 1505
BanII GRGCYC 3 cut(s) 150, 1265, 1447
BauI CACGAG 1 cut(s) 1896
BbrPI CACGTG 1 cut(s) 644
Bbv12I GWGCWC 2 cut(s) 150, 1447
BbvI GCAGC 5 cut(s) 204, 1735, 1787, 1847, 1894
BccI CCATC 3 cut(s) 122, 171, 1813
BceAI ACGGC 3 cut(s) 107, 734, 1610
BciVI GTATCC 2 cut(s) 1570, 1933
BcnI CCSGG 1 cut(s) 1313
BcoDI GTCTC 3 cut(s) 563, 1037, 1559
BfaI CTAG 3 cut(s) 1056, 1601, 1767
BfmI CTRYAG 3 cut(s) 479, 1557, 1773
BfrI CTTAAG 2 cut(s) 446, 458
BfuI GTATCC 2 cut(s) 1570, 1933
BglI GCCNNNNNGGC 1 cut(s) 119
BglII AGATCT 2 cut(s) 1081, 1769
BisI GCNGC 9 cut(s) 133, 159, 218, 351, 492, 1749, 1776, 1836, 1908
BlsI GCNGC 9 cut(s) 134, 160, 219, 352, 493, 1750, 1777, 1837, 1909
Bme1390I CCNGG 1 cut(s) 1313
Bme18I GGWCC 4 cut(s) 175, 841, 891, 1505
BmgT120I GGNCC 5 cut(s) 175, 841, 891, 1505, 1584
BmiI GGNNCC 1 cut(s) 1585
BmrFI CCNGG 1 cut(s) 1313
BmrI ACTGGG 4 cut(s) 1056, 1059, 1267, 1288
BmsI GCATC 3 cut(s) 781, 1345, 1735
BmuI ACTGGG 4 cut(s) 1056, 1059, 1267, 1288
BpmI CTGGAG 1 cut(s) 1230
BpuEI CTTGAG 2 cut(s) 92, 1504
BpuMI CCSGG 1 cut(s) 1313
Bsa29I ATCGAT 1 cut(s) 584
BsaAI YACGTR 2 cut(s) 644, 1742
BsaJI CCNNGG 2 cut(s) 1312, 1929
BsaWI WCCGGW 1 cut(s) 1031
BsaXI ACNNNNNCTCC 6 cut(s) 30, 60, 515, 545, 1042, 1072
Bsc4I CCNNNNNNNGG 4 cut(s) 109, 199, 1318, 1502
Bse1I ACTGG 4 cut(s) 1051, 1065, 1262, 1283
BseCI ATCGAT 1 cut(s) 584
BseDI CCNNGG 2 cut(s) 1312, 1929
BseGI GGATG 4 cut(s) 1094, 1118, 1360, 1808
BseLI CCNNNNNNNGG 4 cut(s) 109, 199, 1318, 1502
BseMII CTCAG 3 cut(s) 212, 811, 1892
BseNI ACTGG 4 cut(s) 1051, 1065, 1262, 1283
BseRI GAGGAG 6 cut(s) 42, 45, 48, 51, 95, 526
BseXI GCAGC 5 cut(s) 204, 1735, 1787, 1847, 1894
BseYI CCCAGC 3 cut(s) 98, 1088, 1366
Bsh1236I CGCG 2 cut(s) 189, 496
Bsh1285I CGRYCG 1 cut(s) 248
BshFI GGCC 4 cut(s) 113, 122, 264, 1586
BshVI ATCGAT 1 cut(s) 584
BsiEI CGRYCG 1 cut(s) 248
BsiHKAI GWGCWC 2 cut(s) 150, 1447
BsiSI CCGG 3 cut(s) 338, 1032, 1312
BslFI GGGAC 3 cut(s) 1047, 1105, 1607
BslI CCNNNNNNNGG 4 cut(s) 109, 199, 1318, 1502
BsmAI GTCTC 3 cut(s) 563, 1037, 1559
BsmBI CGTCTC 1 cut(s) 563
BsmFI GGGAC 3 cut(s) 1047, 1105, 1607
BsmI GAATGC 1 cut(s) 400
BsnI GGCC 4 cut(s) 113, 122, 264, 1586
Bsp1286I GDGCHC 3 cut(s) 150, 1265, 1447
Bsp143I GATC 8 cut(s) 57, 283, 581, 1034, 1081, 1213, 1348, 1769
BspACI CCGC 9 cut(s) 130, 133, 159, 244, 350, 491, 496, 839, 1937
BspANI GGCC 4 cut(s) 113, 122, 264, 1586
BspCNI CTCAG 3 cut(s) 211, 810, 1891
BspDI ATCGAT 1 cut(s) 584
BspFNI CGCG 2 cut(s) 189, 496
BspHI TCATGA 2 cut(s) 180, 760
BspLI GGNNCC 1 cut(s) 1585
BspMAI CTGCAG 1 cut(s) 1777
BspPI GGATC 4 cut(s) 291, 589, 1042, 1208
BspTI CTTAAG 2 cut(s) 446, 458
BsrBI CCGCTC 1 cut(s) 135
BsrI ACTGG 4 cut(s) 1051, 1065, 1262, 1283
BssECI CCNNGG 2 cut(s) 1312, 1929
BssMI GATC 8 cut(s) 57, 283, 581, 1034, 1081, 1213, 1348, 1769
BssNAI GTATAC 1 cut(s) 1408
BssSI CACGAG 1 cut(s) 1896
BssT1I CCWWGG 1 cut(s) 1929
Bst1107I GTATAC 1 cut(s) 1408
Bst2BI CACGAG 1 cut(s) 1896
Bst4CI ACNGT 5 cut(s) 603, 610, 859, 1405, 1915
Bst6I CTCTTC 6 cut(s) 9, 19, 588, 690, 1217, 1661
BstAFI CTTAAG 2 cut(s) 446, 458
BstAPI GCANNNNNTGC 1 cut(s) 347
BstBAI YACGTR 2 cut(s) 644, 1742
BstC8I GCNNGC 2 cut(s) 333, 1698
BstDEI CTNAG 3 cut(s) 198, 797, 1878
BstENI CCTNNNNNAGG 1 cut(s) 107
BstF5I GGATG 4 cut(s) 1094, 1118, 1360, 1808
BstFNI CGCG 2 cut(s) 189, 496
BstHHI GCGC 2 cut(s) 189, 496
BstKTI GATC 8 cut(s) 60, 286, 584, 1037, 1084, 1216, 1351, 1772
BstMAI GTCTC 3 cut(s) 563, 1037, 1559
BstMBI GATC 8 cut(s) 57, 283, 581, 1034, 1081, 1213, 1348, 1769
BstMCI CGRYCG 1 cut(s) 248
BstNSI RCATGY 1 cut(s) 1104
BstSCI CCNGG 1 cut(s) 1311
BstSFI CTRYAG 3 cut(s) 479, 1557, 1773
BstUI CGCG 2 cut(s) 189, 496
BstV1I GCAGC 5 cut(s) 204, 1735, 1787, 1847, 1894
BstX2I RGATCY 3 cut(s) 1081, 1213, 1769
BstYI RGATCY 3 cut(s) 1081, 1213, 1769
BstZ17I GTATAC 1 cut(s) 1408
Bsu15I ATCGAT 1 cut(s) 584
BsuI GTATCC 2 cut(s) 1570, 1933
BsuRI GGCC 4 cut(s) 113, 122, 264, 1586
BsuTUI ATCGAT 1 cut(s) 584
BtsCI GGATG 4 cut(s) 1094, 1118, 1360, 1808
BtsI GCAGTG 2 cut(s) 326, 987
BtsIMutI CAGTG 5 cut(s) 326, 987, 1688, 1911, 1976
Cac8I GCNNGC 2 cut(s) 333, 1698
CaiI CAGNNNCTG 2 cut(s) 292, 1690
CciI TCATGA 2 cut(s) 180, 760
CfoI GCGC 2 cut(s) 189, 496
Cfr13I GGNCC 5 cut(s) 175, 841, 891, 1505, 1584
ClaI ATCGAT 1 cut(s) 584
CseI GACGC 2 cut(s) 292, 1805
Csp6I GTAC 2 cut(s) 442, 1715
CviAII CATG 8 cut(s) 172, 181, 761, 1101, 1154, 1437, 1502, 1840
CviQI GTAC 2 cut(s) 442, 1715
DdeI CTNAG 3 cut(s) 198, 797, 1878
DpnI GATC 8 cut(s) 59, 285, 583, 1036, 1083, 1215, 1350, 1771
DpnII GATC 8 cut(s) 57, 283, 581, 1034, 1081, 1213, 1348, 1769
DraI TTTAAA 1 cut(s) 1890
Eam1104I CTCTTC 6 cut(s) 9, 19, 588, 690, 1217, 1661
EarI CTCTTC 6 cut(s) 9, 19, 588, 690, 1217, 1661
EciI GGCGGA 2 cut(s) 119, 1952
Ecl136II GAGCTC 2 cut(s) 148, 1445
Eco130I CCWWGG 1 cut(s) 1929
Eco147I AGGCCT 1 cut(s) 264
Eco24I GRGCYC 3 cut(s) 150, 1265, 1447
Eco32I GATATC 1 cut(s) 925
Eco47I GGWCC 4 cut(s) 175, 841, 891, 1505
Eco53kI GAGCTC 2 cut(s) 148, 1445
Eco57I CTGAAG 6 cut(s) 569, 1241, 1260, 1379, 1712, 1865
Eco72I CACGTG 1 cut(s) 644
EcoICRI GAGCTC 2 cut(s) 148, 1445
EcoNI CCTNNNNNAGG 1 cut(s) 107
EcoRV GATATC 1 cut(s) 925
EcoT14I CCWWGG 1 cut(s) 1929
EcoT38I GRGCYC 3 cut(s) 150, 1265, 1447
ErhI CCWWGG 1 cut(s) 1929
Esp3I CGTCTC 1 cut(s) 563
FaeI CATG 8 cut(s) 175, 184, 764, 1104, 1157, 1440, 1505, 1843
FaqI GGGAC 3 cut(s) 1047, 1105, 1607
FatI CATG 8 cut(s) 171, 180, 760, 1100, 1153, 1436, 1501, 1839
FauI CCCGC 1 cut(s) 489
FblI GTMKAC 3 cut(s) 93, 605, 1407
Fnu4HI GCNGC 9 cut(s) 133, 159, 218, 351, 492, 1749, 1776, 1836, 1908
FokI GGATG 4 cut(s) 1081, 1105, 1367, 1795
FriOI GRGCYC 3 cut(s) 150, 1265, 1447
Fsp4HI GCNGC 9 cut(s) 133, 159, 218, 351, 492, 1749, 1776, 1836, 1908
FspBI CTAG 3 cut(s) 1056, 1601, 1767
GlaI GCGC 2 cut(s) 188, 495
GluI GCNGC 9 cut(s) 133, 159, 218, 351, 492, 1749, 1776, 1836, 1908
GsaI CCCAGC 3 cut(s) 102, 1092, 1370
GsuI CTGGAG 1 cut(s) 1230
HaeIII GGCC 4 cut(s) 113, 122, 264, 1586
HapII CCGG 3 cut(s) 338, 1032, 1312
HgaI GACGC 2 cut(s) 292, 1805
HhaI GCGC 2 cut(s) 189, 496
Hin1II CATG 8 cut(s) 175, 184, 764, 1104, 1157, 1440, 1505, 1843
Hin6I GCGC 2 cut(s) 187, 494
HinP1I GCGC 2 cut(s) 187, 494
HincII GTYRAC 3 cut(s) 94, 606, 822
HindII GTYRAC 3 cut(s) 94, 606, 822
HindIII AAGCTT 3 cut(s) 812, 1229, 1703
HpaI GTTAAC 1 cut(s) 822
HpaII CCGG 3 cut(s) 338, 1032, 1312
HphI GGTGA 2 cut(s) 214, 1264
Hpy166II GTNNAC 5 cut(s) 94, 606, 822, 1255, 1408
Hpy188I TCNGA 9 cut(s) 139, 145, 152, 561, 1221, 1473, 1542, 1548, 1881
Hpy8I GTNNAC 5 cut(s) 94, 606, 822, 1255, 1408
Hpy99I CGWCG 3 cut(s) 128, 308, 610
HpyCH4III ACNGT 5 cut(s) 603, 610, 859, 1405, 1915
HpyCH4IV ACGT 3 cut(s) 296, 643, 1741
HpyF3I CTNAG 3 cut(s) 198, 797, 1878
HpySE526I ACGT 3 cut(s) 296, 643, 1741
Hsp92II CATG 8 cut(s) 175, 184, 764, 1104, 1157, 1440, 1505, 1843
HspAI GCGC 2 cut(s) 187, 494
KspAI GTTAAC 1 cut(s) 822
Kzo9I GATC 8 cut(s) 57, 283, 581, 1034, 1081, 1213, 1348, 1769
LmnI GCTCC 7 cut(s) 140, 153, 340, 802, 1249, 1321, 1450
Lsp1109I GCAGC 5 cut(s) 204, 1735, 1787, 1847, 1894
LweI GCATC 3 cut(s) 781, 1345, 1735
MaeI CTAG 3 cut(s) 1056, 1601, 1767
MaeII ACGT 3 cut(s) 296, 643, 1741
MaeIII GTNAC 3 cut(s) 714, 1067, 1162
MalI GATC 8 cut(s) 59, 285, 583, 1036, 1083, 1215, 1350, 1771
MbiI CCGCTC 1 cut(s) 135
MboI GATC 8 cut(s) 57, 283, 581, 1034, 1081, 1213, 1348, 1769
MflI RGATCY 3 cut(s) 1081, 1213, 1769
MhlI GDGCHC 3 cut(s) 150, 1265, 1447
MluCI AATT 7 cut(s) 225, 319, 636, 756, 1140, 1674, 1945
MlyI GAGTC 2 cut(s) 83, 147
MmeI TCCRAC 1 cut(s) 175
MroXI GAANNNNTTC 2 cut(s) 699, 914
MseI TTAA 8 cut(s) 212, 299, 447, 459, 821, 1388, 1451, 1889
MslI CAYNNNNRTG 3 cut(s) 708, 1099, 1158
MspCI CTTAAG 2 cut(s) 446, 458
MspI CCGG 3 cut(s) 338, 1032, 1312
MspR9I CCNGG 1 cut(s) 1313
Mva1269I GAATGC 1 cut(s) 400
MvnI CGCG 2 cut(s) 189, 496
NciI CCSGG 1 cut(s) 1313
NdeII GATC 8 cut(s) 57, 283, 581, 1034, 1081, 1213, 1348, 1769
NlaIII CATG 8 cut(s) 175, 184, 764, 1104, 1157, 1440, 1505, 1843
NlaIV GGNNCC 1 cut(s) 1585
NmeAIII GCCGAG 1 cut(s) 1466
NmuCI GTSAC 1 cut(s) 1162
NspI RCATGY 1 cut(s) 1104
PagI TCATGA 2 cut(s) 180, 760
PceI AGGCCT 1 cut(s) 264
PcsI WCGNNNNNNNCGW 1 cut(s) 724
PctI GAATGC 1 cut(s) 400
PdmI GAANNNNTTC 2 cut(s) 699, 914
PfeI GAWTC 8 cut(s) 140, 475, 700, 899, 931, 965, 1543, 1966
PflMI CCANNNNNTGG 1 cut(s) 1502
PkrI GCNGC 9 cut(s) 134, 160, 219, 352, 493, 1750, 1777, 1837, 1909
PleI GAGTC 2 cut(s) 82, 147
PmaCI CACGTG 1 cut(s) 644
PmlI CACGTG 1 cut(s) 644
PpsI GAGTC 2 cut(s) 82, 147
Ppu21I YACGTR 2 cut(s) 644, 1742
Psp124BI GAGCTC 2 cut(s) 150, 1447
PspCI CACGTG 1 cut(s) 644
PspFI CCCAGC 3 cut(s) 98, 1088, 1366
PspN4I GGNNCC 1 cut(s) 1585
PspPI GGNCC 5 cut(s) 175, 841, 891, 1505, 1584
PstI CTGCAG 1 cut(s) 1777
PstNI CAGNNNCTG 2 cut(s) 292, 1690
PsuI RGATCY 3 cut(s) 1081, 1213, 1769
RsaI GTAC 2 cut(s) 443, 1716
RsaNI GTAC 2 cut(s) 442, 1715
RseI CAYNNNNRTG 3 cut(s) 708, 1099, 1158
SacI GAGCTC 2 cut(s) 150, 1447
SalI GTCGAC 2 cut(s) 92, 604
SaqAI TTAA 8 cut(s) 212, 299, 447, 459, 821, 1388, 1451, 1889
SatI GCNGC 9 cut(s) 133, 159, 218, 351, 492, 1749, 1776, 1836, 1908
Sau3AI GATC 8 cut(s) 57, 283, 581, 1034, 1081, 1213, 1348, 1769
Sau96I GGNCC 5 cut(s) 175, 841, 891, 1505, 1584
SchI GAGTC 2 cut(s) 83, 147
ScrFI CCNGG 1 cut(s) 1313
SduI GDGCHC 3 cut(s) 150, 1265, 1447
SfaNI GCATC 3 cut(s) 781, 1345, 1735
SfcI CTRYAG 3 cut(s) 479, 1557, 1773
SfiI GGCCNNNNNGGCC 1 cut(s) 119
SinI GGWCC 4 cut(s) 175, 841, 891, 1505
SmiMI CAYNNNNRTG 3 cut(s) 708, 1099, 1158
SmlI CTYRAG 4 cut(s) 107, 446, 458, 1483
SmoI CTYRAG 4 cut(s) 107, 446, 458, 1483
Sse9I AATT 7 cut(s) 225, 319, 636, 756, 1140, 1674, 1945
SseBI AGGCCT 1 cut(s) 264
SsiI CCGC 9 cut(s) 130, 133, 159, 244, 350, 491, 496, 839, 1937
SspMI CTAG 3 cut(s) 1056, 1601, 1767
SstI GAGCTC 2 cut(s) 150, 1447
StuI AGGCCT 1 cut(s) 264
StyD4I CCNGG 1 cut(s) 1311
StyI CCWWGG 1 cut(s) 1929
TaaI ACNGT 5 cut(s) 603, 610, 859, 1405, 1915
TaiI ACGT 3 cut(s) 299, 646, 1744
TaqI TCGA 8 cut(s) 60, 81, 93, 248, 533, 584, 605, 1760
TasI AATT 7 cut(s) 225, 319, 636, 756, 1140, 1674, 1945
TauI GCSGC 4 cut(s) 135, 161, 353, 494
TfiI GAWTC 8 cut(s) 140, 475, 700, 899, 931, 965, 1543, 1966
Tru1I TTAA 8 cut(s) 212, 299, 447, 459, 821, 1388, 1451, 1889
Tru9I TTAA 8 cut(s) 212, 299, 447, 459, 821, 1388, 1451, 1889
TscAI CASTG 5 cut(s) 333, 994, 1695, 1918, 1976
TseFI GTSAC 1 cut(s) 1162
TseI GCWGC 5 cut(s) 217, 1748, 1775, 1835, 1907
Tsp45I GTSAC 1 cut(s) 1162
TspDTI ATGAA 8 cut(s) 197, 401, 692, 699, 749, 907, 1017, 1490
TspGWI ACGGA 1 cut(s) 86
TspRI CASTG 5 cut(s) 333, 994, 1695, 1918, 1976
Van91I CCANNNNNTGG 1 cut(s) 1502
Vha464I CTTAAG 2 cut(s) 446, 458
VpaK11BI GGWCC 4 cut(s) 175, 841, 891, 1505
XagI CCTNNNNNAGG 1 cut(s) 107
XapI RAATTY 3 cut(s) 319, 756, 1140
XbaI TCTAGA 1 cut(s) 1766
XceI RCATGY 1 cut(s) 1104
XcmI CCANNNNNNNNNTGG 1 cut(s) 1254
XmiI GTMKAC 3 cut(s) 93, 605, 1407
XmnI GAANNNNTTC 2 cut(s) 699, 914
XspI CTAG 3 cut(s) 1056, 1601, 1767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.