RLG00000027852

UV-stimulated scaffold protein A homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0014390
Physical Location & Seq
Forward (+)
16072349 .. 16074605
2257 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027852

Sequence Viewer

Length: 1989 bp
ATGAAGGAAGAAGAAGAGGGAGGAAGAGGAGGAGGGAAGGTTAGGGTTTTAATCGAGAAGGCAACGGAGTCAATCGAACCAGAGGTCGACCCCCGCCTCCTCAAGGCCATCAAGGCCGTCGTCCGCCGCTCCGATTCCGAGCTCCGACTCGCAGCCCATCTTCTCATGGACCTCATGAAGCGCGACCACTCTCAGGTGAGGTATTTAACGCTGCTGATAATTGATGAGCTTTTTATGCGGTCGAAGCTGTTTAGAGGCCTTGTGGTTGAGAATATGGATCAGTTGTTGACGTTAAGCGTCGGGTTCAGAAGGAATTTGCCACTGCCAGCTCCGGCAAATGTTGCGGCTACTCTGCGTTTGAAGGCGATTGAGTTTTTGGAGAAGTGGAATGCTTCGTATGGTGTTCATTATAGGCAGATTAGGTTAGGGTTTGAGTACCTTAAGAACACGCTTAAGTTTCAGTTCCCGAATCTACAGGCAAATGCGGCGCGGGTTCAGCAGGAGAGGAGGGAGAGGGAGAGGAAGTCGAAGGAGATTTTGCTGAAGAAGTTTCAGAGTTTGGAGAGGAGTTTTGGATCGATAAAGGAAGAGATACAGTCGACGGTTGATGAGATTGGGGAGTGTTTAGAAATTGCACGTGCTAAAGAGGAACACTCGCAGTTTGTTCCTTTAGATGATGAAGATTTTGAAGAGATTCATTCTTATGAGCTACGGCAGTTGCGTTTGCAAACGTTGGAAGAAGAAGATAAAATTCATGAGAATACTGAAAACAAAGTGGTTTTTGATGCACTCAGGGAGCTTTACAAGCTTTTGTTAACAAAGCATTTGGTTGCGGTCCAAGAATGGATAACTGTTCTTGTAAGGGTTGAACTGACTGATAACAGGTGCAGAGATTCCTATTTGAAGGAGTTCATTGATATCCGGAATCATATTCAGTCAGTCAAGAAGAAGTGTGAAGAATCAGGTTGCACTCTTCTTAACACTGCAAATCCTGATGAAGAAGATTTTTGGGAGGAAGGCAATATCGGATCAGTTGAGACTGGGAGTTCTAGTCGTCCCAGTAACAACATTGAGGATCTTGCTGGGACATCTACATCTACATCTACATCTACATCTACATCTACATCTACATCCAATGAGGTAAAAGAGAGAATTTCTAAAGCACATGGTAATGTGACAAACAGCAAAAAAACTCGCAGTCGTGAAGGTGGTGTAGCCAAGTTAGATCCTCTGAAGAGTAAGCTTTTGGCTGAAGCTCCAGAGGTGAACTGGGGCTCTTATTTGGATAACTGGGGTTCAAAGAGAGATGTATTGGCTAACCACCGGGGTTTGGAGCTTGAAAGTCATTGGGGCAGAGTAGATCAGGATGCAGTTATCCCAGCAGATAAGATTGCAGAGTTAAATCTTCAGGCTACTGTATACAAAGAAAAGCAAGTTGATATTCCACCATGCCGAGCTCCATTAAGTAATGGAAAACTTTGTCAGAGAAAAGACTTGAGAGTTTGTCCATTTCATGGACCTATTATTCCCAGAGATGATGAGGGGAAGCCTCCGAATCAGAACCCTTCTATAGATGAGACAACTCTGGATACGGGGGCCACAGGGGACAATCTAGTAGAGCAGTTGGCGAAACAAGCCGTGAAGAATGTTCGTGAGAAAGATAAAGAGTTAGCAAGGAAGAGAGAAATTGATAAACAGGCACTGAAGCGTGCAAAGCTTGCAAAAGTACGAGAACACAATGATTTGGTTTTACGTGATGCTGCTATGGCTTCAACTTCTAGATCTGCAGCTATCGGAGAAGATTTGGAGGCAAACCCATCATCCAGAAACAAAAAGAAAACCCTTGCAGCCATGCTGAAGAAGAAAGAAACACCAAAAGATAGATTAGCTCAGAGGCTTTTAAACACACGAGCGAGTGCTGCCACTGTAAGACAGTTTACCTTGGGGGCGGATACTAATTACAGAGAAGCCTTCCCGAATCAGTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2043

Protein Analysis

663

Amino Acids

75.17

Weight (kDa)

8.24

Isoelectric Point (pI)

43.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UVSSA_N PF20867 14 - 150 1.1e-36 UVSSA N-terminal domain
DUF2043 PF09740 418 - 519 4.4e-31 Uncharacterized conserved protein (DUF2043)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Orthologous Genes (Group: OG0014390)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61800 AT3G61800
fragaria_vesca FvH4_7g16650
malus_domestica MD01G1082100.v1.1 MD07G1150500.v1.1
prunus_persica Prupe.2G189300_v2.0.a1
pyrus_communis pycom07g14900
rosa_chinensis RchiOBHm_Chr1g0359811
rosa_laevigata RLG00000027852
rosa_multiflora Rmu_ssc0000371.1_g000006
rosa_roxburghii Rroxscaffold_4G00296810
rosa_rugosa Rorug01G0272800
rosa_samantha Rh1AG286700 Rh1BG252600 Rh1CG269800 Rh1DG281600
rosa_wichuraiana Rw1G025460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1514
AccBSI CCGCTC 1 cut(s) 129
AccI GTMKAC 3 cut(s) 87, 599, 1419
AccII CGCG 2 cut(s) 183, 490
AccIII TCCGGA 1 cut(s) 921
AciI CCGC 9 cut(s) 94, 124, 127, 238, 344, 485, 490, 833, 1949
AclI AACGTT 1 cut(s) 731
AclWI GGATC 5 cut(s) 285, 583, 1036, 1083, 1220
AcsI RAATTY 3 cut(s) 313, 750, 1152
AcuI CTGAAG 6 cut(s) 563, 1253, 1272, 1391, 1724, 1877
AcvI CACGTG 1 cut(s) 638
AfaI GTAC 2 cut(s) 437, 1728
AfiI CCNNNNNNNGG 4 cut(s) 103, 193, 1330, 1514
AflII CTTAAG 2 cut(s) 440, 452
AgsI TTSAA 7 cut(s) 361, 689, 869, 904, 1299, 1340, 1773
Alw21I GWGCWC 2 cut(s) 144, 1459
Alw26I GTCTC 2 cut(s) 1031, 1571
AlwI GGATC 5 cut(s) 285, 583, 1036, 1083, 1220
AlwNI CAGNNNCTG 1 cut(s) 1702
Aor13HI TCCGGA 1 cut(s) 921
AoxI GGCC 4 cut(s) 105, 114, 256, 1596
ApeKI GCWGC 6 cut(s) 152, 211, 1760, 1787, 1847, 1919
ApoI RAATTY 3 cut(s) 313, 750, 1152
ArsI GACNNNNNNTTYG 2 cut(s) 69, 101
Asp700I GAANNNNTTC 2 cut(s) 693, 908
AspLEI GCGC 2 cut(s) 183, 490
AspS9I GGNCC 4 cut(s) 169, 835, 1517, 1596
AsuC2I CCSGG 1 cut(s) 1325
AsuHPI GGTGA 2 cut(s) 208, 1276
AvaII GGWCC 3 cut(s) 169, 835, 1517
BanII GRGCYC 3 cut(s) 144, 1277, 1459
BauI CACGAG 1 cut(s) 1908
BbrPI CACGTG 1 cut(s) 638
Bbv12I GWGCWC 2 cut(s) 144, 1459
BbvI GCAGC 6 cut(s) 164, 198, 1747, 1799, 1859, 1906
BccI CCATC 3 cut(s) 116, 165, 1825
BceAI ACGGC 3 cut(s) 101, 728, 1622
BciVI GTATCC 2 cut(s) 1582, 1945
BcnI CCSGG 1 cut(s) 1325
BcoDI GTCTC 2 cut(s) 1031, 1571
BfaI CTAG 3 cut(s) 1050, 1613, 1779
BfmI CTRYAG 3 cut(s) 473, 1569, 1785
BfrI CTTAAG 2 cut(s) 440, 452
BfuI GTATCC 2 cut(s) 1582, 1945
BglI GCCNNNNNGGC 1 cut(s) 113
BglII AGATCT 1 cut(s) 1781
BisI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1761, 1788, 1848, 1920
BlsI GCNGC 9 cut(s) 128, 154, 213, 346, 487, 1762, 1789, 1849, 1921
Bme1390I CCNGG 1 cut(s) 1325
Bme18I GGWCC 3 cut(s) 169, 835, 1517
BmgT120I GGNCC 4 cut(s) 169, 835, 1517, 1596
BmiI GGNNCC 1 cut(s) 1597
BmrFI CCNGG 1 cut(s) 1325
BmrI ACTGGG 4 cut(s) 1050, 1053, 1279, 1300
BmsI GCATC 3 cut(s) 775, 1357, 1747
BmuI ACTGGG 4 cut(s) 1050, 1053, 1279, 1300
BplI GAGNNNNNCTC 2 cut(s) 638, 670
BpmI CTGGAG 1 cut(s) 1242
BpuEI CTTGAG 2 cut(s) 86, 1516
BpuMI CCSGG 1 cut(s) 1325
Bsa29I ATCGAT 1 cut(s) 578
BsaAI YACGTR 2 cut(s) 638, 1754
BsaJI CCNNGG 2 cut(s) 1324, 1941
BsaWI WCCGGW 1 cut(s) 921
BsaXI ACNNNNNCTCC 6 cut(s) 24, 54, 509, 539, 1036, 1066
Bsc4I CCNNNNNNNGG 4 cut(s) 103, 193, 1330, 1514
Bse1I ACTGG 4 cut(s) 1045, 1059, 1274, 1295
BseAI TCCGGA 1 cut(s) 921
BseCI ATCGAT 1 cut(s) 578
BseDI CCNNGG 2 cut(s) 1324, 1941
BseGI GGATG 3 cut(s) 1130, 1372, 1820
BseLI CCNNNNNNNGG 4 cut(s) 103, 193, 1330, 1514
BseMII CTCAG 3 cut(s) 206, 805, 1904
BseNI ACTGG 4 cut(s) 1045, 1059, 1274, 1295
BseRI GAGGAG 5 cut(s) 42, 45, 89, 520, 580
BseXI GCAGC 6 cut(s) 164, 198, 1747, 1799, 1859, 1906
BseYI CCCAGC 2 cut(s) 1082, 1378
BsgI GTGCAG 1 cut(s) 907
Bsh1236I CGCG 2 cut(s) 183, 490
Bsh1285I CGRYCG 1 cut(s) 242
BshFI GGCC 4 cut(s) 107, 116, 258, 1598
BshVI ATCGAT 1 cut(s) 578
BsiEI CGRYCG 1 cut(s) 242
BsiHKAI GWGCWC 2 cut(s) 144, 1459
BsiSI CCGG 3 cut(s) 332, 922, 1324
BslFI GGGAC 3 cut(s) 1041, 1099, 1619
BslI CCNNNNNNNGG 4 cut(s) 103, 193, 1330, 1514
BsmAI GTCTC 2 cut(s) 1031, 1571
BsmFI GGGAC 3 cut(s) 1041, 1099, 1619
BsmI GAATGC 1 cut(s) 394
BsnI GGCC 4 cut(s) 107, 116, 258, 1598
Bsp1286I GDGCHC 3 cut(s) 144, 1277, 1459
Bsp13I TCCGGA 1 cut(s) 921
Bsp143I GATC 7 cut(s) 277, 575, 1028, 1075, 1225, 1360, 1781
BspACI CCGC 9 cut(s) 94, 124, 127, 238, 344, 485, 490, 833, 1949
BspANI GGCC 4 cut(s) 107, 116, 258, 1598
BspCNI CTCAG 3 cut(s) 205, 804, 1903
BspDI ATCGAT 1 cut(s) 578
BspEI TCCGGA 1 cut(s) 921
BspFNI CGCG 2 cut(s) 183, 490
BspHI TCATGA 2 cut(s) 174, 754
BspLI GGNNCC 1 cut(s) 1597
BspMAI CTGCAG 1 cut(s) 1789
BspPI GGATC 5 cut(s) 285, 583, 1036, 1083, 1220
BspTI CTTAAG 2 cut(s) 440, 452
BsrBI CCGCTC 1 cut(s) 129
BsrI ACTGG 4 cut(s) 1045, 1059, 1274, 1295
BssECI CCNNGG 2 cut(s) 1324, 1941
BssMI GATC 7 cut(s) 277, 575, 1028, 1075, 1225, 1360, 1781
BssNAI GTATAC 1 cut(s) 1420
BssSI CACGAG 1 cut(s) 1908
BssT1I CCWWGG 1 cut(s) 1941
Bst1107I GTATAC 1 cut(s) 1420
Bst2BI CACGAG 1 cut(s) 1908
Bst4CI ACNGT 6 cut(s) 597, 604, 853, 1417, 1927, 1935
Bst6I CTCTTC 7 cut(s) 9, 19, 582, 684, 978, 1229, 1673
BstAFI CTTAAG 2 cut(s) 440, 452
BstAPI GCANNNNNTGC 2 cut(s) 341, 1718
BstBAI YACGTR 2 cut(s) 638, 1754
BstC8I GCNNGC 3 cut(s) 327, 1710, 1719
BstDEI CTNAG 3 cut(s) 192, 791, 1890
BstENI CCTNNNNNAGG 1 cut(s) 101
BstF5I GGATG 3 cut(s) 1130, 1372, 1820
BstFNI CGCG 2 cut(s) 183, 490
BstHHI GCGC 2 cut(s) 183, 490
BstKTI GATC 7 cut(s) 280, 578, 1031, 1078, 1228, 1363, 1784
BstMAI GTCTC 2 cut(s) 1031, 1571
BstMBI GATC 7 cut(s) 277, 575, 1028, 1075, 1225, 1360, 1781
BstMCI CGRYCG 1 cut(s) 242
BstSCI CCNGG 1 cut(s) 1323
BstSFI CTRYAG 3 cut(s) 473, 1569, 1785
BstUI CGCG 2 cut(s) 183, 490
BstV1I GCAGC 6 cut(s) 164, 198, 1747, 1799, 1859, 1906
BstX2I RGATCY 3 cut(s) 1075, 1225, 1781
BstYI RGATCY 3 cut(s) 1075, 1225, 1781
BstZ17I GTATAC 1 cut(s) 1420
Bsu15I ATCGAT 1 cut(s) 578
BsuI GTATCC 2 cut(s) 1582, 1945
BsuRI GGCC 4 cut(s) 107, 116, 258, 1598
BsuTUI ATCGAT 1 cut(s) 578
BtsCI GGATG 3 cut(s) 1130, 1372, 1820
BtsI GCAGTG 2 cut(s) 320, 981
BtsIMutI CAGTG 5 cut(s) 320, 981, 1700, 1923, 1988
Cac8I GCNNGC 3 cut(s) 327, 1710, 1719
CaiI CAGNNNCTG 1 cut(s) 1702
CciI TCATGA 2 cut(s) 174, 754
CfoI GCGC 2 cut(s) 183, 490
Cfr13I GGNCC 4 cut(s) 169, 835, 1517, 1596
ClaI ATCGAT 1 cut(s) 578
CseI GACGC 1 cut(s) 286
Csp6I GTAC 2 cut(s) 436, 1727
CviAII CATG 7 cut(s) 166, 175, 755, 1166, 1449, 1514, 1852
CviQI GTAC 2 cut(s) 436, 1727
DdeI CTNAG 3 cut(s) 192, 791, 1890
DpnI GATC 7 cut(s) 279, 577, 1030, 1077, 1227, 1362, 1783
DpnII GATC 7 cut(s) 277, 575, 1028, 1075, 1225, 1360, 1781
DraI TTTAAA 1 cut(s) 1902
Eam1104I CTCTTC 7 cut(s) 9, 19, 582, 684, 978, 1229, 1673
EarI CTCTTC 7 cut(s) 9, 19, 582, 684, 978, 1229, 1673
EciI GGCGGA 2 cut(s) 113, 1964
Ecl136II GAGCTC 2 cut(s) 142, 1457
Eco130I CCWWGG 1 cut(s) 1941
Eco147I AGGCCT 1 cut(s) 258
Eco24I GRGCYC 3 cut(s) 144, 1277, 1459
Eco32I GATATC 1 cut(s) 919
Eco47I GGWCC 3 cut(s) 169, 835, 1517
Eco53kI GAGCTC 2 cut(s) 142, 1457
Eco57I CTGAAG 6 cut(s) 563, 1253, 1272, 1391, 1724, 1877
Eco72I CACGTG 1 cut(s) 638
EcoICRI GAGCTC 2 cut(s) 142, 1457
EcoNI CCTNNNNNAGG 1 cut(s) 101
EcoRV GATATC 1 cut(s) 919
EcoT14I CCWWGG 1 cut(s) 1941
EcoT38I GRGCYC 3 cut(s) 144, 1277, 1459
ErhI CCWWGG 1 cut(s) 1941
FaeI CATG 7 cut(s) 169, 178, 758, 1169, 1452, 1517, 1855
FaqI GGGAC 3 cut(s) 1041, 1099, 1619
FatI CATG 7 cut(s) 165, 174, 754, 1165, 1448, 1513, 1851
FauI CCCGC 2 cut(s) 101, 483
FblI GTMKAC 3 cut(s) 87, 599, 1419
Fnu4HI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1761, 1788, 1848, 1920
FokI GGATG 3 cut(s) 1117, 1379, 1807
FriOI GRGCYC 3 cut(s) 144, 1277, 1459
Fsp4HI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1761, 1788, 1848, 1920
FspBI CTAG 3 cut(s) 1050, 1613, 1779
GlaI GCGC 2 cut(s) 182, 489
GluI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1761, 1788, 1848, 1920
GsaI CCCAGC 2 cut(s) 1086, 1382
GsuI CTGGAG 1 cut(s) 1242
HaeIII GGCC 4 cut(s) 107, 116, 258, 1598
HapII CCGG 3 cut(s) 332, 922, 1324
HgaI GACGC 1 cut(s) 286
HhaI GCGC 2 cut(s) 183, 490
Hin1II CATG 7 cut(s) 169, 178, 758, 1169, 1452, 1517, 1855
Hin6I GCGC 2 cut(s) 181, 488
HinP1I GCGC 2 cut(s) 181, 488
HincII GTYRAC 4 cut(s) 88, 288, 600, 816
HindII GTYRAC 4 cut(s) 88, 288, 600, 816
HindIII AAGCTT 3 cut(s) 806, 1241, 1715
HpaI GTTAAC 1 cut(s) 816
HpaII CCGG 3 cut(s) 332, 922, 1324
HphI GGTGA 2 cut(s) 208, 1276
Hpy166II GTNNAC 7 cut(s) 88, 288, 600, 816, 1267, 1420, 1938
Hpy8I GTNNAC 7 cut(s) 88, 288, 600, 816, 1267, 1420, 1938
Hpy99I CGWCG 3 cut(s) 122, 302, 604
HpyCH4III ACNGT 6 cut(s) 597, 604, 853, 1417, 1927, 1935
HpyCH4IV ACGT 4 cut(s) 290, 637, 731, 1753
HpyF3I CTNAG 3 cut(s) 192, 791, 1890
HpySE526I ACGT 4 cut(s) 290, 637, 731, 1753
Hsp92II CATG 7 cut(s) 169, 178, 758, 1169, 1452, 1517, 1855
HspAI GCGC 2 cut(s) 181, 488
Kpn2I TCCGGA 1 cut(s) 921
KspAI GTTAAC 1 cut(s) 816
Kzo9I GATC 7 cut(s) 277, 575, 1028, 1075, 1225, 1360, 1781
LmnI GCTCC 7 cut(s) 134, 147, 334, 796, 1261, 1333, 1462
Lsp1109I GCAGC 6 cut(s) 164, 198, 1747, 1799, 1859, 1906
LweI GCATC 3 cut(s) 775, 1357, 1747
MaeI CTAG 3 cut(s) 1050, 1613, 1779
MaeII ACGT 4 cut(s) 290, 637, 731, 1753
MaeIII GTNAC 2 cut(s) 1061, 1174
MalI GATC 7 cut(s) 279, 577, 1030, 1077, 1227, 1362, 1783
MbiI CCGCTC 1 cut(s) 129
MboI GATC 7 cut(s) 277, 575, 1028, 1075, 1225, 1360, 1781
MflI RGATCY 3 cut(s) 1075, 1225, 1781
MhlI GDGCHC 3 cut(s) 144, 1277, 1459
MluCI AATT 7 cut(s) 219, 313, 630, 750, 1152, 1686, 1957
MlyI GAGTC 2 cut(s) 77, 141
MmeI TCCRAC 2 cut(s) 169, 714
MroI TCCGGA 1 cut(s) 921
MroXI GAANNNNTTC 2 cut(s) 693, 908
MslI CAYNNNNRTG 2 cut(s) 702, 1170
MspCI CTTAAG 2 cut(s) 440, 452
MspI CCGG 3 cut(s) 332, 922, 1324
MspR9I CCNGG 1 cut(s) 1325
Mva1269I GAATGC 1 cut(s) 394
MvnI CGCG 2 cut(s) 183, 490
NciI CCSGG 1 cut(s) 1325
NdeII GATC 7 cut(s) 277, 575, 1028, 1075, 1225, 1360, 1781
NlaIII CATG 7 cut(s) 169, 178, 758, 1169, 1452, 1517, 1855
NlaIV GGNNCC 1 cut(s) 1597
NmeAIII GCCGAG 1 cut(s) 1478
NmuCI GTSAC 1 cut(s) 1174
PagI TCATGA 2 cut(s) 174, 754
PceI AGGCCT 1 cut(s) 258
PcsI WCGNNNNNNNCGW 1 cut(s) 718
PctI GAATGC 1 cut(s) 394
PdmI GAANNNNTTC 2 cut(s) 693, 908
PfeI GAWTC 8 cut(s) 134, 469, 694, 893, 925, 959, 1555, 1978
PflMI CCANNNNNTGG 1 cut(s) 1514
PkrI GCNGC 9 cut(s) 128, 154, 213, 346, 487, 1762, 1789, 1849, 1921
PleI GAGTC 2 cut(s) 76, 141
PmaCI CACGTG 1 cut(s) 638
PmlI CACGTG 1 cut(s) 638
PpsI GAGTC 2 cut(s) 76, 141
Ppu21I YACGTR 2 cut(s) 638, 1754
Psp124BI GAGCTC 2 cut(s) 144, 1459
Psp1406I AACGTT 1 cut(s) 731
PspCI CACGTG 1 cut(s) 638
PspFI CCCAGC 2 cut(s) 1082, 1378
PspN4I GGNNCC 1 cut(s) 1597
PspPI GGNCC 4 cut(s) 169, 835, 1517, 1596
PstI CTGCAG 1 cut(s) 1789
PstNI CAGNNNCTG 1 cut(s) 1702
PsuI RGATCY 3 cut(s) 1075, 1225, 1781
RsaI GTAC 2 cut(s) 437, 1728
RsaNI GTAC 2 cut(s) 436, 1727
RseI CAYNNNNRTG 2 cut(s) 702, 1170
SacI GAGCTC 2 cut(s) 144, 1459
SalI GTCGAC 2 cut(s) 86, 598
SatI GCNGC 9 cut(s) 127, 153, 212, 345, 486, 1761, 1788, 1848, 1920
Sau3AI GATC 7 cut(s) 277, 575, 1028, 1075, 1225, 1360, 1781
Sau96I GGNCC 4 cut(s) 169, 835, 1517, 1596
SchI GAGTC 2 cut(s) 77, 141
ScrFI CCNGG 1 cut(s) 1325
SduI GDGCHC 3 cut(s) 144, 1277, 1459
SfaNI GCATC 3 cut(s) 775, 1357, 1747
SfcI CTRYAG 3 cut(s) 473, 1569, 1785
SfiI GGCCNNNNNGGCC 1 cut(s) 113
SinI GGWCC 3 cut(s) 169, 835, 1517
SmiMI CAYNNNNRTG 2 cut(s) 702, 1170
SmlI CTYRAG 4 cut(s) 101, 440, 452, 1495
SmoI CTYRAG 4 cut(s) 101, 440, 452, 1495
Sse9I AATT 7 cut(s) 219, 313, 630, 750, 1152, 1686, 1957
SseBI AGGCCT 1 cut(s) 258
SsiI CCGC 9 cut(s) 94, 124, 127, 238, 344, 485, 490, 833, 1949
SspMI CTAG 3 cut(s) 1050, 1613, 1779
SstI GAGCTC 2 cut(s) 144, 1459
StuI AGGCCT 1 cut(s) 258
StyD4I CCNGG 1 cut(s) 1323
StyI CCWWGG 1 cut(s) 1941
TaaI ACNGT 6 cut(s) 597, 604, 853, 1417, 1927, 1935
TaiI ACGT 4 cut(s) 293, 640, 734, 1756
TaqI TCGA 7 cut(s) 54, 75, 87, 242, 527, 578, 599
TasI AATT 7 cut(s) 219, 313, 630, 750, 1152, 1686, 1957
TauI GCSGC 3 cut(s) 129, 347, 488
TfiI GAWTC 8 cut(s) 134, 469, 694, 893, 925, 959, 1555, 1978
TscAI CASTG 5 cut(s) 327, 988, 1707, 1930, 1988
TseFI GTSAC 1 cut(s) 1174
TseI GCWGC 6 cut(s) 152, 211, 1760, 1787, 1847, 1919
Tsp45I GTSAC 1 cut(s) 1174
TspDTI ATGAA 9 cut(s) 17, 191, 395, 686, 693, 743, 901, 1011, 1502
TspGWI ACGGA 1 cut(s) 80
TspRI CASTG 5 cut(s) 327, 988, 1707, 1930, 1988
Van91I CCANNNNNTGG 1 cut(s) 1514
Vha464I CTTAAG 2 cut(s) 440, 452
VpaK11BI GGWCC 3 cut(s) 169, 835, 1517
XagI CCTNNNNNAGG 1 cut(s) 101
XapI RAATTY 3 cut(s) 313, 750, 1152
XbaI TCTAGA 1 cut(s) 1778
XcmI CCANNNNNNNNNTGG 1 cut(s) 1266
XmiI GTMKAC 3 cut(s) 87, 599, 1419
XmnI GAANNNNTTC 2 cut(s) 693, 908
XspI CTAG 3 cut(s) 1050, 1613, 1779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.