Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0007050

Physical Location & Seq

Genomic Coordinates Reverse (-)

25017270 .. 25021278

Gene Structure 4009 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1172700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGGAACCTGGAAATAACCAAAATGTCAACGAAAACAGCTCCCTGGAGTCGTTTTGCGTAGGGCATGAGAAGGTACTTGCGACACATGACCCATTGAACTGGGGGATGGCAGCTGAAGCACTGAAAGGGAGCCATCTGGACGAGTTCAAACGGATGGTCAAGGATTACAGGAAGCCAGTGGTGAAGCTTGGTGGCGAGAGCCTGACGGTGGCTCAGGTGGCTGCGATTGCCAACCATGACGGTGCCAAGGTGGAGCTGTCGGAGGACAAAAGGGCTGGGGTAAAGGCCAGCAGTGATTGGGTTATGGATAGCATGGGCAAAGGCACAGACAGCTATGGTGTGACCACTGGCTTTGGTGCAACCTCGCATAGGAGAACCAAGCAAGGTGGAGCTCTTCAGAGGGAGCTAATTAGATTCTTGAATGCTGGGATCTTTGGCAGCAGCACAGAATCAACCCATATTCTGCCTCACACAGCAACAAGAGCAGCAATGCTAGTGAGGATCAACACCCTCCTCCAAGGCTACTCTGGAATCAGATTCGAAATCTTGGAAGCCATCACCAAGTTCCTCAACAACAATGTCACCCCTTGCCTTCCCCTCAGGGGCACAATCACTGCCTCAGGGGACTTGGTTCCGCTCTCGTACATTGCCGGGCTTTTGATAGGCAGGCCAAATTCCAAGTCCATCGGGCCTAATGGCAAAACCCTAACCGCTTCTGATGCCTTCAAGCTAGCTGGAATTGATGGTGGGTTCTTTGAGTTGCAGCCAAAGGAAGGGCTTGCATTGGTCAATGGAACTGCTGTTGGGTCTGGTTTGGCTTCTATGGTTCTGTTTGAGTCCAACACACAAGCACTTTTATCAGAAGTGTTGTCGGCAATTTTCGCCGAAGTTATGCAAGGAAAGCCTGAGTTTACAGATCACTTGACTCACAAGTTAAAGCACCACCCTGGCCAAATTGAAGCTGCAGCAATAATGGAACACATTTTAGCTGGAAGTGATTATGTAAAAGCAGCTGAAAAGGTGCATGAGATGGACCCTCTTCAGAAGCCAAGGCAGGACCGGTATGCTCTTAGAACATCTCCCCAATGGCTAGGCCCACAGATTGAGGTGATCAGAGCAGCAACGAAGATGATTGAGAGGGAGATCAACTCAGTGAATGACAACCCTTTGATTGATGTCTCAAGAAACAAGGCATTACATGGAGGAAACTTTCAGGGCACCCCGATCGGTGTTGCCATGGACAACACCAGATTAGCCATTGCTGCAATTGGAAAACTTATGTTTGCTCAGTTCTCGGAGCTTGTCAATGACTTTTACAACAATGGGTTGCCTTCAAATCTCACGGCAAGCAGCAACCCCAGCTTGGATTACGGGTTCAAAGGCGCTGAAATCGCCATGGCGTCTTACTGCTCGGAGCTCCAGTTCCTTGGTAACCCTGTCACAAACCATGTCCAGAGTGCAGAGCAGCACAACCAAGATGTCAACTCCTTGGGATTGATTTCTTCACGAAAAACTGCTGAGGCTGTTGACATATTGAAGCTCATGTCATCCACTTTCCTAGTTGCATTGTGCCAAGCTATTGATTTAAGGCATTTGGAAGAGAATTTGAAAAGCACAGTGAAGACCACTGTCAGTCAGGTTGCCAAGAGAGTCCTCACTGTGGGCTTGAACGGCGAGCTTCACCCATCTCGGTTCTGCGAAAAGGACCTCCTTAAGGTCGTCGATCGTGAGTATGTTTTTGCCTACATCGATGATCCCTGCAGTGCTACATATCCTCTAATGCAGAAACTGAGGCATGTACTAGTTGAGCATGCATTGAGCAATGGTGAGAAGGAGATGAGTACAAGCACTTCCATTTTCCAAAAGATTACAGCTTTTGAGGAGGAATTGAAAACCCTTTTGCCGAAAGAGGTCGACAATGCCCGGGCTGAGTACGAGAACGGGAAAACAGCAATCCCAAATAGGATCAAGGAATGCAGGTCTTACCCATTGTACAAGTTTGTGAGGGAGGAGTTGGGGACTGATCTGTTGACTGGTGATAAAGTGAGATCACCAGGGGAAGAATGTGACAAGGTTTTCAGTGCTATGTGTGCTGGGAAGTTGATTGATCCTCTGCTAGATTGCTTGAAGGAGTGGAATGGTGCTCCTCTTCCTATTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009636 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0016598 GO:0016829 GO:0016840 GO:0016841 GO:0019438 GO:0019538 GO:0019748 GO:0019941 GO:0030163 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044550 GO:0045548 GO:0046677 GO:0046898 GO:0050896 GO:0051603 GO:0060992 GO:0071704 GO:0097305 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901654 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko01100 ko01110 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

Lyase_aromatic

Protein Analysis

721

Amino Acids

78.51

Weight (kDa)

6.16

Isoelectric Point (pI)

30.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_aromatic	PF00221	68 - 543	1.9e-153	Aromatic amino acid lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10340 AT5G04230 AT5G04230
fragaria_vesca	FvH4_7g19130
malus_domestica	MD01G1106900.v1.1 MD07G1172700.v1.1
prunus_persica	Prupe.2G211800_v2.0.a1 Prupe.2G211800_v2.0.a1 Prupe.2G211800_v2.0.a1
pyrus_communis	pycom01g13360 pycom07g16720
rosa_chinensis	RchiOBHm_Chr1g0363011
rosa_laevigata	RLG00000027602
rosa_multiflora	Rmu_co8466277.1_g000001 Rmu_sc0000174.1_g000003 Rmu_ssc0000356.1_g000001
rosa_roxburghii	Rroxscaffold_4G00293550
rosa_rugosa	Rorug01G0303500 Rorug04G0330100 Rorug04G0330200
rosa_samantha	Rh1AG312500 Rh1BG275900 Rh1CG292700 Rh1DG306500
rosa_wichuraiana	Rw1G027700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1968
AccB1I	GGYRCC	2 cut(s)	242, 1217
AccBSI	CCGCTC	1 cut(s)	637
AccI	GTMKAC	1 cut(s)	1914
AciI	CCGC	2 cut(s)	635, 711
AclWI	GGATC	5 cut(s)	437, 509, 1748, 1973, 2102
AcoI	YGGCCR	1 cut(s)	949
AcsI	RAATTY	2 cut(s)	673, 1603
AcuI	CTGAAG	3 cut(s)	135, 380, 1025
AcyI	GRCGYC	1 cut(s)	1400
AfaI	GTAC	6 cut(s)	75, 644, 1800, 1843, 1934, 1994
AfiI	CCNNNNNNNGG	7 cut(s)	208, 369, 602, 773, 1363, 1660, 1714
AflII	CTTAAG	1 cut(s)	1712
AgeI	ACCGGT	1 cut(s)	1059
AhlI	ACTAGT	1 cut(s)	1801
AjnI	CCWGG	4 cut(s)	7, 42, 946, 2053
AloI	GAACNNNNNNTCC	4 cut(s)	1358, 1390, 1406, 1438
Alw21I	GWGCWC	3 cut(s)	394, 1419, 2146
Alw26I	GTCTC	1 cut(s)	1183
AlwI	GGATC	5 cut(s)	437, 509, 1748, 1973, 2102
AlwNI	CAGNNNCTG	1 cut(s)	1789
Ama87I	CYCGRG	1 cut(s)	1923
AoxI	GGCC	5 cut(s)	285, 668, 689, 949, 1093
ApoI	RAATTY	2 cut(s)	673, 1603
ArsI	GACNNNNNNTTYG	4 cut(s)	141, 173, 665, 697
AsiGI	ACCGGT	1 cut(s)	1059
AspLEI	GCGC	1 cut(s)	1385
AspS9I	GGNCC	5 cut(s)	689, 1033, 1057, 1094, 1705
AsuC2I	CCSGG	3 cut(s)	652, 1924, 1925
AsuHPI	GGTGA	8 cut(s)	193, 550, 574, 1120, 1673, 1838, 2043, 2048
AsuII	TTCGAA	1 cut(s)	540
AsuNHI	GCTAGC	1 cut(s)	730
AvaI	CYCGRG	1 cut(s)	1923
AvaII	GGWCC	3 cut(s)	1033, 1057, 1705
AxyI	CCTNAGG	2 cut(s)	599, 619
BaeGI	GKGCMC	2 cut(s)	608, 1220
BalI	TGGCCA	1 cut(s)	951
BanI	GGYRCC	2 cut(s)	242, 1217
BanII	GRGCYC	2 cut(s)	394, 1419
BarI	GAAGNNNNNNTAC	2 cut(s)	1834, 1866
BbsI	GAAGAC	1 cut(s)	1628
Bbv12I	GWGCWC	3 cut(s)	394, 1419, 2146
BbvCI	CCTCAGC	1 cut(s)	1518
BccI	CCATC	8 cut(s)	100, 141, 148, 563, 692, 737, 1024, 1693
BceAI	ACGGC	2 cut(s)	1359, 1687
BcgI	CGANNNNNNTGC	2 cut(s)	1207, 1241
BciT130I	CCWGG	4 cut(s)	9, 44, 948, 2055
BclI	TGATCA	1 cut(s)	1110
BcnI	CCSGG	3 cut(s)	652, 1924, 1925
BcoDI	GTCTC	1 cut(s)	1183
BcuI	ACTAGT	1 cut(s)	1801
BfaI	CTAG	6 cut(s)	494, 731, 1091, 1559, 1802, 2117
BfmI	CTRYAG	2 cut(s)	963, 1759
BfoI	RGCGCY	1 cut(s)	1386
BfrI	CTTAAG	1 cut(s)	1712
BfuAI	ACCTGC	1 cut(s)	1968
Bme1390I	CCNGG	7 cut(s)	9, 44, 652, 948, 1924, 1925, 2055
Bme18I	GGWCC	3 cut(s)	1033, 1057, 1705
BmeT110I	CYCGRG	1 cut(s)	1923
BmgT120I	GGNCC	5 cut(s)	689, 1033, 1057, 1094, 1705
BmiI	GGNNCC	6 cut(s)	6, 131, 244, 633, 1035, 1219
BmrFI	CCNGG	7 cut(s)	9, 44, 652, 948, 1924, 1925, 2055
BmrI	ACTGGG	1 cut(s)	109
BmsI	GCATC	1 cut(s)	709
BmtI	GCTAGC	1 cut(s)	734
BmuI	ACTGGG	1 cut(s)	109
BoxI	GACNNNNGTC	1 cut(s)	1628
BpiI	GAAGAC	1 cut(s)	1628
BplI	GAGNNNNNCTC	2 cut(s)	1133, 1165
BpmI	CTGGAG	2 cut(s)	65, 1403
Bpu10I	CCTNAGC	2 cut(s)	213, 1518
Bpu14I	TTCGAA	1 cut(s)	540
BpuEI	CTTGAG	1 cut(s)	1165
BpuMI	CCSGG	3 cut(s)	652, 1924, 1925
Bsa29I	ATCGAT	1 cut(s)	1749
BsaHI	GRCGYC	1 cut(s)	1400
BsaWI	WCCGGW	1 cut(s)	1059
BsaXI	ACNNNNNCTCC	2 cut(s)	1406, 1436
Bsc4I	CCNNNNNNNGG	7 cut(s)	208, 369, 602, 773, 1363, 1660, 1714
Bse118I	RCCGGY	1 cut(s)	1059
Bse1I	ACTGG	5 cut(s)	104, 176, 352, 1420, 2038
Bse21I	CCTNAGG	2 cut(s)	599, 619
Bse3DI	GCAATG	4 cut(s)	495, 645, 1257, 1828
BseBI	CCWGG	4 cut(s)	9, 44, 948, 2055
BseCI	ATCGAT	1 cut(s)	1749
BseGI	GGATG	3 cut(s)	111, 159, 1547
BseLI	CCNNNNNNNGG	7 cut(s)	208, 369, 602, 773, 1363, 1660, 1714
BseMI	GCAATG	4 cut(s)	495, 645, 1257, 1828
BseMII	CTCAG	9 cut(s)	227, 613, 633, 897, 1164, 1301, 1509, 1781, 1920
BseNI	ACTGG	5 cut(s)	104, 176, 352, 1420, 2038
BseRI	GAGGAG	4 cut(s)	503, 1895, 2024, 2136
BseSI	GKGCMC	2 cut(s)	608, 1220
BseYI	CCCAGC	4 cut(s)	275, 425, 1358, 2093
BsgI	GTGCAG	1 cut(s)	1479
Bsh1285I	CGRYCG	2 cut(s)	1227, 1726
BshFI	GGCC	5 cut(s)	287, 670, 691, 951, 1095
BshNI	GGYRCC	2 cut(s)	242, 1217
BshTI	ACCGGT	1 cut(s)	1059
BshVI	ATCGAT	1 cut(s)	1749
BsiEI	CGRYCG	2 cut(s)	1227, 1726
BsiHKAI	GWGCWC	3 cut(s)	394, 1419, 2146
BsiHKCI	CYCGRG	1 cut(s)	1923
BsiSI	CCGG	3 cut(s)	651, 1060, 1924
BslFI	GGGAC	2 cut(s)	638, 2032
BslI	CCNNNNNNNGG	7 cut(s)	208, 369, 602, 773, 1363, 1660, 1714
BsmAI	GTCTC	1 cut(s)	1183
BsmFI	GGGAC	2 cut(s)	638, 2032
BsmI	GAATGC	2 cut(s)	427, 1979
BsnI	GGCC	5 cut(s)	287, 670, 691, 951, 1095
BsoBI	CYCGRG	1 cut(s)	1923
Bsp119I	TTCGAA	1 cut(s)	540
Bsp1286I	GDGCHC	5 cut(s)	394, 608, 1220, 1419, 2146
Bsp1407I	TGTACA	1 cut(s)	1992
Bsp19I	CCATGG	2 cut(s)	1236, 1395
BspACI	CCGC	2 cut(s)	635, 711
BspANI	GGCC	5 cut(s)	287, 670, 691, 951, 1095
BspCNI	CTCAG	9 cut(s)	226, 612, 632, 898, 1163, 1300, 1510, 1782, 1921
BspDI	ATCGAT	1 cut(s)	1749
BspLI	GGNNCC	6 cut(s)	6, 131, 244, 633, 1035, 1219
BspMAI	CTGCAG	2 cut(s)	967, 1763
BspMI	ACCTGC	1 cut(s)	1968
BspOI	GCTAGC	1 cut(s)	734
BspPI	GGATC	5 cut(s)	437, 509, 1748, 1973, 2102
BspQI	GCTCTTC	1 cut(s)	399
BspT104I	TTCGAA	1 cut(s)	540
BspT107I	GGYRCC	2 cut(s)	242, 1217
BspTI	CTTAAG	1 cut(s)	1712
BsrBI	CCGCTC	1 cut(s)	637
BsrDI	GCAATG	4 cut(s)	495, 645, 1257, 1828
BsrFI	RCCGGY	1 cut(s)	1059
BsrGI	TGTACA	1 cut(s)	1992
BsrI	ACTGG	5 cut(s)	104, 176, 352, 1420, 2038
BssAI	RCCGGY	1 cut(s)	1059
BssNI	GRCGYC	1 cut(s)	1400
BssT1I	CCWWGG	7 cut(s)	246, 517, 1049, 1236, 1395, 1426, 1488
Bst2UI	CCWGG	4 cut(s)	9, 44, 948, 2055
Bst4CI	ACNGT	5 cut(s)	208, 242, 1618, 1630, 1660
Bst6I	CTCTTC	4 cut(s)	399, 1044, 1593, 2154
BstACI	GRCGYC	1 cut(s)	1400
BstAFI	CTTAAG	1 cut(s)	1712
BstAUI	TGTACA	1 cut(s)	1992
BstBI	TTCGAA	1 cut(s)	540
BstC8I	GCNNGC	7 cut(s)	289, 668, 732, 780, 1348, 1676, 1812
BstDSI	CCRYGG	2 cut(s)	1236, 1395
BstEII	GGTNACC	1 cut(s)	1430
BstENI	CCTNNNNNAGG	2 cut(s)	367, 1712
BstF5I	GGATG	3 cut(s)	111, 159, 1547
BstH2I	RGCGCY	1 cut(s)	1386
BstHHI	GCGC	1 cut(s)	1385
BstMAI	GTCTC	1 cut(s)	1183
BstMCI	CGRYCG	2 cut(s)	1227, 1726
BstNI	CCWGG	4 cut(s)	9, 44, 948, 2055
BstNSI	RCATGY	2 cut(s)	1799, 1814
BstPAI	GACNNNNGTC	1 cut(s)	1628
BstPI	GGTNACC	1 cut(s)	1430
BstSCI	CCNGG	7 cut(s)	7, 42, 650, 946, 1922, 1923, 2053
BstSFI	CTRYAG	2 cut(s)	963, 1759
BstSLI	GKGCMC	2 cut(s)	608, 1220
BstV2I	GAAGAC	1 cut(s)	1628
BstX2I	RGATCY	1 cut(s)	429
BstXI	CCANNNNNNTGG	2 cut(s)	99, 1427
BstYI	RGATCY	1 cut(s)	429
Bsu15I	ATCGAT	1 cut(s)	1749
Bsu36I	CCTNAGG	2 cut(s)	599, 619
BsuRI	GGCC	5 cut(s)	287, 670, 691, 951, 1095
BsuTUI	ATCGAT	1 cut(s)	1749
BtgI	CCRYGG	2 cut(s)	1236, 1395
BtsCI	GGATG	3 cut(s)	111, 159, 1547
BtsI	GCAGTG	3 cut(s)	298, 612, 1768
BveI	ACCTGC	1 cut(s)	1968
Cac8I	GCNNGC	7 cut(s)	289, 668, 732, 780, 1348, 1676, 1812
CaiI	CAGNNNCTG	1 cut(s)	1789
CfoI	GCGC	1 cut(s)	1385
Cfr10I	RCCGGY	1 cut(s)	1059
Cfr13I	GGNCC	5 cut(s)	689, 1033, 1057, 1094, 1705
Cfr9I	CCCGGG	1 cut(s)	1923
ClaI	ATCGAT	1 cut(s)	1749
CseI	GACGC	1 cut(s)	1389
Csp6I	GTAC	6 cut(s)	74, 643, 1799, 1842, 1933, 1993
CspAI	ACCGGT	1 cut(s)	1059
CspCI	CAANNNNNGTGG	4 cut(s)	334, 367, 369, 402
CviQI	GTAC	6 cut(s)	74, 643, 1799, 1842, 1933, 1993
EaeI	YGGCCR	1 cut(s)	949
Eam1104I	CTCTTC	4 cut(s)	399, 1044, 1593, 2154
EarI	CTCTTC	4 cut(s)	399, 1044, 1593, 2154
Ecl136II	GAGCTC	2 cut(s)	392, 1417
Eco130I	CCWWGG	7 cut(s)	246, 517, 1049, 1236, 1395, 1426, 1488
Eco24I	GRGCYC	2 cut(s)	394, 1419
Eco47I	GGWCC	3 cut(s)	1033, 1057, 1705
Eco53kI	GAGCTC	2 cut(s)	392, 1417
Eco57I	CTGAAG	3 cut(s)	135, 380, 1025
Eco81I	CCTNAGG	2 cut(s)	599, 619
Eco88I	CYCGRG	1 cut(s)	1923
Eco91I	GGTNACC	1 cut(s)	1430
EcoICRI	GAGCTC	2 cut(s)	392, 1417
EcoNI	CCTNNNNNAGG	2 cut(s)	367, 1712
EcoO109I	RGGNCCY	1 cut(s)	1705
EcoO65I	GGTNACC	1 cut(s)	1430
EcoRII	CCWGG	4 cut(s)	7, 42, 946, 2053
EcoT14I	CCWWGG	7 cut(s)	246, 517, 1049, 1236, 1395, 1426, 1488
EcoT22I	ATGCAT	1 cut(s)	1816
EcoT38I	GRGCYC	2 cut(s)	394, 1419
ErhI	CCWWGG	7 cut(s)	246, 517, 1049, 1236, 1395, 1426, 1488
FaqI	GGGAC	2 cut(s)	638, 2032
FbaI	TGATCA	1 cut(s)	1110
FblI	GTMKAC	1 cut(s)	1914
FokI	GGATG	3 cut(s)	118, 166, 1534
FriOI	GRGCYC	2 cut(s)	394, 1419
FspBI	CTAG	6 cut(s)	494, 731, 1091, 1559, 1802, 2117
GlaI	GCGC	1 cut(s)	1384
GsaI	CCCAGC	4 cut(s)	279, 429, 1362, 2097
GsuI	CTGGAG	2 cut(s)	65, 1403
HaeII	RGCGCY	1 cut(s)	1386
HaeIII	GGCC	5 cut(s)	287, 670, 691, 951, 1095
HapII	CCGG	3 cut(s)	651, 1060, 1924
HgaI	GACGC	1 cut(s)	1389
HhaI	GCGC	1 cut(s)	1385
Hin1I	GRCGYC	1 cut(s)	1400
Hin6I	GCGC	1 cut(s)	1383
HinP1I	GCGC	1 cut(s)	1383
HincII	GTYRAC	5 cut(s)	28, 1483, 1528, 1915, 2031
HindII	GTYRAC	5 cut(s)	28, 1483, 1528, 1915, 2031
HindIII	AAGCTT	1 cut(s)	185
HinfI	GANTC	8 cut(s)	47, 414, 449, 531, 537, 836, 925, 1650
HpaII	CCGG	3 cut(s)	651, 1060, 1924
HphI	GGTGA	8 cut(s)	193, 550, 574, 1120, 1673, 1838, 2043, 2048
Hpy166II	GTNNAC	6 cut(s)	28, 912, 1483, 1528, 1915, 2031
Hpy188I	TCNGA	9 cut(s)	262, 399, 536, 718, 862, 1044, 1115, 1297, 1414
Hpy188III	TCNNGA	7 cut(s)	137, 418, 528, 1182, 1453, 1506, 1727
Hpy8I	GTNNAC	6 cut(s)	28, 912, 1483, 1528, 1915, 2031
Hpy99I	CGWCG	1 cut(s)	1724
HpyAV	CCTTC	7 cut(s)	64, 602, 733, 767, 1341, 1825, 2122
HpyCH4III	ACNGT	5 cut(s)	208, 242, 1618, 1630, 1660
Hsp92I	GRCGYC	1 cut(s)	1400
HspAI	GCGC	1 cut(s)	1383
Ksp22I	TGATCA	1 cut(s)	1110
LguI	GCTCTTC	1 cut(s)	399
LmnI	GCTCC	9 cut(s)	44, 129, 253, 389, 403, 1297, 1414, 1422, 2149
LweI	GCATC	1 cut(s)	709
MaeI	CTAG	6 cut(s)	494, 731, 1091, 1559, 1802, 2117
MaeIII	GTNAC	5 cut(s)	340, 580, 1430, 1438, 2066
MbiI	CCGCTC	1 cut(s)	637
MboII	GAAGA	8 cut(s)	386, 1031, 1138, 1494, 1610, 1633, 2072, 2141
MfeI	CAATTG	1 cut(s)	1266
MflI	RGATCY	1 cut(s)	429
MhlI	GDGCHC	5 cut(s)	394, 608, 1220, 1419, 2146
MlsI	TGGCCA	1 cut(s)	951
MluCI	AATT	8 cut(s)	408, 673, 738, 876, 954, 1266, 1603, 1886
MluNI	TGGCCA	1 cut(s)	951
MlyI	GAGTC	4 cut(s)	56, 845, 919, 1659
MmeI	TCCRAC	2 cut(s)	240, 864
Mox20I	TGGCCA	1 cut(s)	951
Mph1103I	ATGCAT	1 cut(s)	1816
MscI	TGGCCA	1 cut(s)	951
MseI	TTAA	4 cut(s)	935, 1586, 1713, 2161
MslI	CAYNNNNRTG	1 cut(s)	240
Msp20I	TGGCCA	1 cut(s)	951
MspA1I	CMGCKG	2 cut(s)	113, 1013
MspCI	CTTAAG	1 cut(s)	1712
MspI	CCGG	3 cut(s)	651, 1060, 1924
MspR9I	CCNGG	7 cut(s)	9, 44, 652, 948, 1924, 1925, 2055
MunI	CAATTG	1 cut(s)	1266
Mva1269I	GAATGC	2 cut(s)	427, 1979
MvaI	CCWGG	4 cut(s)	9, 44, 948, 2055
NciI	CCSGG	3 cut(s)	652, 1924, 1925
NcoI	CCATGG	2 cut(s)	1236, 1395
NheI	GCTAGC	1 cut(s)	730
NlaIV	GGNNCC	6 cut(s)	6, 131, 244, 633, 1035, 1219
NmuCI	GTSAC	4 cut(s)	340, 580, 1438, 2066
NsiI	ATGCAT	1 cut(s)	1816
NspI	RCATGY	2 cut(s)	1799, 1814
NspV	TTCGAA	1 cut(s)	540
PaeI	GCATGC	1 cut(s)	1814
PciSI	GCTCTTC	1 cut(s)	399
PctI	GAATGC	2 cut(s)	427, 1979
PfeI	GAWTC	4 cut(s)	414, 449, 531, 537
PinAI	ACCGGT	1 cut(s)	1059
Ple19I	CGATCG	2 cut(s)	1227, 1726
PleI	GAGTC	4 cut(s)	55, 844, 919, 1658
PpsI	GAGTC	4 cut(s)	55, 844, 919, 1658
PpuMI	RGGWCCY	1 cut(s)	1705
PshAI	GACNNNNGTC	1 cut(s)	1628
Psp124BI	GAGCTC	2 cut(s)	394, 1419
Psp5II	RGGWCCY	1 cut(s)	1705
Psp6I	CCWGG	4 cut(s)	7, 42, 946, 2053
PspEI	GGTNACC	1 cut(s)	1430
PspFI	CCCAGC	4 cut(s)	275, 425, 1358, 2093
PspGI	CCWGG	4 cut(s)	7, 42, 946, 2053
PspN4I	GGNNCC	6 cut(s)	6, 131, 244, 633, 1035, 1219
PspPI	GGNCC	5 cut(s)	689, 1033, 1057, 1094, 1705
PspPPI	RGGWCCY	1 cut(s)	1705
PstI	CTGCAG	2 cut(s)	967, 1763
PstNI	CAGNNNCTG	1 cut(s)	1789
PsuI	RGATCY	1 cut(s)	429
PvuI	CGATCG	2 cut(s)	1227, 1726
PvuII	CAGCTG	2 cut(s)	113, 1013
RsaI	GTAC	6 cut(s)	75, 644, 1800, 1843, 1934, 1994
RsaNI	GTAC	6 cut(s)	74, 643, 1799, 1842, 1933, 1993
RseI	CAYNNNNRTG	1 cut(s)	240
SacI	GAGCTC	2 cut(s)	394, 1419
SalI	GTCGAC	1 cut(s)	1913
SapI	GCTCTTC	1 cut(s)	399
SaqAI	TTAA	4 cut(s)	935, 1586, 1713, 2161
Sau96I	GGNCC	5 cut(s)	689, 1033, 1057, 1094, 1705
SchI	GAGTC	4 cut(s)	56, 845, 919, 1659
ScrFI	CCNGG	7 cut(s)	9, 44, 652, 948, 1924, 1925, 2055
SduI	GDGCHC	5 cut(s)	394, 608, 1220, 1419, 2146
SfaNI	GCATC	1 cut(s)	709
SfcI	CTRYAG	2 cut(s)	963, 1759
SfuI	TTCGAA	1 cut(s)	540
SinI	GGWCC	3 cut(s)	1033, 1057, 1705
SmaI	CCCGGG	1 cut(s)	1925
SmiMI	CAYNNNNRTG	1 cut(s)	240
SmlI	CTYRAG	2 cut(s)	1180, 1712
SmoI	CTYRAG	2 cut(s)	1180, 1712
SpeI	ACTAGT	1 cut(s)	1801
SphI	GCATGC	1 cut(s)	1814
SrfI	GCCCGGGC	1 cut(s)	1925
Sse9I	AATT	8 cut(s)	408, 673, 738, 876, 954, 1266, 1603, 1886
SsiI	CCGC	2 cut(s)	635, 711
SspMI	CTAG	6 cut(s)	494, 731, 1091, 1559, 1802, 2117
SstI	GAGCTC	2 cut(s)	394, 1419
StyD4I	CCNGG	7 cut(s)	7, 42, 650, 946, 1922, 1923, 2053
StyI	CCWWGG	7 cut(s)	246, 517, 1049, 1236, 1395, 1426, 1488
TaaI	ACNGT	5 cut(s)	208, 242, 1618, 1630, 1660
TaqI	TCGA	4 cut(s)	540, 1722, 1749, 1914
TasI	AATT	8 cut(s)	408, 673, 738, 876, 954, 1266, 1603, 1886
TatI	WGTACW	3 cut(s)	1798, 1841, 1992
TfiI	GAWTC	4 cut(s)	414, 449, 531, 537
Tru1I	TTAA	4 cut(s)	935, 1586, 1713, 2161
Tru9I	TTAA	4 cut(s)	935, 1586, 1713, 2161
TseFI	GTSAC	4 cut(s)	340, 580, 1438, 2066
Tsp45I	GTSAC	4 cut(s)	340, 580, 1438, 2066
TspGWI	ACGGA	1 cut(s)	166
TspMI	CCCGGG	1 cut(s)	1923
Vha464I	CTTAAG	1 cut(s)	1712
VpaK11BI	GGWCC	3 cut(s)	1033, 1057, 1705
XagI	CCTNNNNNAGG	2 cut(s)	367, 1712
XapI	RAATTY	2 cut(s)	673, 1603
XceI	RCATGY	2 cut(s)	1799, 1814
XcmI	CCANNNNNNNNNTGG	1 cut(s)	524
XmaI	CCCGGG	1 cut(s)	1923
XmiI	GTMKAC	1 cut(s)	1914
XspI	CTAG	6 cut(s)	494, 731, 1091, 1559, 1802, 2117
Zsp2I	ATGCAT	1 cut(s)	1816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.