Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0007050

Physical Location & Seq

Genomic Coordinates Reverse (-)

55197794 .. 55201420

Gene Structure 3627 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G027700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGCACCCAACACCGGCAACGGGAACGTGGCATCAGTGGAGTCATCATTTTGCCAAGGAGGATACGACCCGCTGAACTGGAACATGGCCGCGGAGTCGCTGACGGGGAGCCACCTGGACGAGCTGAAGAGAATGGTCGGCGATTACCGGAAGCCGGTGGTGAAGCTGGGAGGGGAGCACCTGACGATAGGGCAGGTGGCGGCGATTGCCAACCACGACGCTGGCGTGCGGGTGGAGCTGTCCGAGGAGAAGAGGGCTGGGGTGAAGGCCAGCAGTGACTGGGTGATGGATTCAATGGGGAAGGGTACAGACAGCTACGGTGTGACCACCGGGTTCGGTGCAACATCCCACCGGAGAACCAAAAACGGTGGAGCTCTTCAGAGAGAACTGATCAGATTCTTGAATGCTGGAATTTTTGGAAGCAGCTCAGACTCAAATCACAAATTGCCTCACACCGCAACTAGGGCGGCGATGCTAGTGAGGATCAACACCCTCCTCCAGGGTTATTCGGGGATTAGGTTTGAAATCCTGGAAGCCATTACCAAACTCATCAACAGCAACATCACCCCATGCCTGCCTCTTCGGGGCACCATCACCGCGTCGGGAGACTTGGTTCCCCTCTCGTACATTGCTGGGCTTTTGATAGGCAGGCCCAATTCAAAGTCCATCGGGCCTAACGGAGAGACCCTAACCCCAGCTGAGGCCTTTAAGCTGGCTGGAATTCAGGGTGATTTCTTTGAGTTGCAACCCAAGGAAGGCCTTGCTATGGTGAATGGCACTGCTGTTGGGTCTGGTATGGCTTCTGTGGTGCTGTTTGAGGCTAACACTCTAGCTGTTCTCGCCGAAATCATGTCAGCAATTTTCGCTGAAGTTATGCAAGGAAAGCCGGAGTTTACAGACCACTTGACTCACAAACTGAAGCATCACCCTGGCCAGATTGAAGCTGCAGCCATAATGGAGCACATTCTTGATGGGAGCTCATATGTGAAAGAAGCGAAAAAGGTTCACGAAATGGACCCTCTTCAAAAGCCCAAGCAAGACAGATATGCTCTAAGAACCTCCCCACAATGGCTAGGCCCCCTGATTGAGGTGATCAGATCATCAACCAAAATGATTGAGAGGGAGATCAACTCTGTCAACGACAATCCATTGATCGATGTCTCGAGGAACAAGGCTTTACACGGTGGAAACTTCCAAGGAACCCCAATTGGTACTGCCATGGACAACACCAGACTCGCCATTGCCTCAATTGGGAAACTCATATTTGCACAATTCTCTGAGCTTGTCAATGACTACTACAACAATGGCTTGCCTTCCAACCTCTCAGGTGGCAGCAACCCTAGTTTGGACTACGGGTTCAAAGGTGCAGAAATCGCAATGGCATCTTACTGCTCCGAGCTTCAGTTTCTTGCCAACCCTGTGACCAACCATGTCCAAAGTGCTGAGCAACACAACCAAGATGTCAACTCATTGGGACTGATCTCCTCTAGGAAAACATCCGAGGCTGTCGACATTTTGAAGCTGATGTCATCCACTTTCCTAGTTGCATTGTGCCAAGCTATTGATCTCAGGTATGTGGAGGAGAACTTGAAGAACGTTGTCAAGAACACTGTAAGTAATGTAGCAAAGAGGACCCTGACCGTTGCCCCCAACGGTGATCTTCACCCCTCTCGATTCTCCGAGAAACACCTGCTCTCAGTCGTGGACCGCGAGTACCTTTTCTCCTACATTGACGACCCCTGCCTTGCCACTTACCCATTGATGCAGAAACTGAGGGCAGAGCTAGTTGAACATGCATTGAATAATGGTGACAAAGAGAAGAGCACAAACACCTCCATCTTCCACAAGATTGCTGCTTTCGAAGAGGAACTGAAGAATGTCCTGCCAAGAGAAGTCGACAATGCGAGGATCGAAATTGAGAATGGGAAAGCAGAGATCGCAAACAGGATCAAGGACTGCAGGTCTTACCCATTGTACAGGTTTGTGAGGGAGGAATTGGGGACTAGTTTGTTGACAGGTGAGAAAACCAAGTCGCCTGGAGAAGAATGTGACAAGGTGTTCAATGCAATCTGCGCCGGAAAGCTCATTGATCCTCTGCTGGAGTGTTTGAAGGAGTGGAATGGTGCCCCCCTGCCCATAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009058 GO:0009636 GO:0009698 GO:0009699 GO:0009719 GO:0009725 GO:0009739 GO:0009987 GO:0010033 GO:0010243 GO:0014070 GO:0016598 GO:0016829 GO:0016840 GO:0016841 GO:0019438 GO:0019538 GO:0019748 GO:0019941 GO:0030163 GO:0033993 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044550 GO:0045548 GO:0046677 GO:0046898 GO:0050896 GO:0051603 GO:0060992 GO:0071704 GO:0097305 GO:1901360 GO:1901362 GO:1901564 GO:1901565 GO:1901575 GO:1901576 GO:1901654 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00360 ko00940 ko01100 ko01110 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

Lyase_aromatic

Protein Analysis

714

Amino Acids

77.73

Weight (kDa)

6.13

Isoelectric Point (pI)

33.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lyase_aromatic	PF00221	61 - 533	1.2e-151	Aromatic amino acid lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10340 AT5G04230 AT5G04230
fragaria_vesca	FvH4_7g19130
malus_domestica	MD01G1106900.v1.1 MD07G1172700.v1.1
prunus_persica	Prupe.2G211800_v2.0.a1 Prupe.2G211800_v2.0.a1 Prupe.2G211800_v2.0.a1
pyrus_communis	pycom01g13360 pycom07g16720
rosa_chinensis	RchiOBHm_Chr1g0363011
rosa_laevigata	RLG00000027602
rosa_multiflora	Rmu_co8466277.1_g000001 Rmu_sc0000174.1_g000003 Rmu_ssc0000356.1_g000001
rosa_roxburghii	Rroxscaffold_4G00293550
rosa_rugosa	Rorug01G0303500 Rorug04G0330100 Rorug04G0330200
rosa_samantha	Rh1AG312500 Rh1BG275900 Rh1CG292700 Rh1DG306500
rosa_wichuraiana	Rw1G027700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	184, 1698
Acc36I	ACCTGC	3 cut(s)	184, 1698, 1950
AccB1I	GGYRCC	3 cut(s)	4, 587, 2123
AccI	GTMKAC	2 cut(s)	1509, 1896
AccII	CGCG	3 cut(s)	92, 599, 1710
AciI	CCGC	9 cut(s)	71, 90, 92, 200, 229, 456, 467, 597, 1708
AclI	AACGTT	1 cut(s)	1596
AclWI	GGATC	4 cut(s)	491, 1916, 1955, 2084
AcoI	YGGCCR	2 cut(s)	87, 931
AcsI	RAATTY	2 cut(s)	411, 720
AcuI	CTGAAG	6 cut(s)	146, 362, 888, 938, 1385, 1892
AfaI	GTAC	5 cut(s)	307, 626, 1213, 1715, 1976
AhdI	GACNNNNNGTC	1 cut(s)	1960
AhlI	ACTAGT	1 cut(s)	2003
AjnI	CCWGG	5 cut(s)	114, 498, 528, 928, 2035
AloI	GAACNNNNNNTCC	4 cut(s)	597, 629, 1340, 1372
Alw21I	GWGCWC	5 cut(s)	180, 376, 963, 980, 1826
Alw26I	GTCTC	3 cut(s)	600, 677, 1165
AlwI	GGATC	4 cut(s)	491, 1916, 1955, 2084
AlwNI	CAGNNNCTG	2 cut(s)	279, 1771
Ama87I	CYCGRG	1 cut(s)	1162
AoxI	GGCC	8 cut(s)	87, 267, 650, 671, 702, 757, 931, 1075
ApeKI	GCWGC	5 cut(s)	423, 944, 947, 1332, 1853
ApoI	RAATTY	2 cut(s)	411, 720
AspLEI	GCGC	1 cut(s)	2075
AspS9I	GGNCC	6 cut(s)	651, 671, 1015, 1076, 1632, 1705
AsuC2I	CCSGG	1 cut(s)	331
AsuII	TTCGAA	1 cut(s)	1860
AvaI	CYCGRG	1 cut(s)	1162
AvaII	GGWCC	3 cut(s)	1015, 1632, 1705
BaeGI	GKGCMC	2 cut(s)	590, 2128
BalI	TGGCCA	1 cut(s)	933
BanI	GGYRCC	3 cut(s)	4, 587, 2123
BanII	GRGCYC	2 cut(s)	376, 980
Bbv12I	GWGCWC	5 cut(s)	180, 376, 963, 980, 1826
BbvCI	CCTCAGC	1 cut(s)	699
BbvI	GCAGC	5 cut(s)	435, 931, 959, 1344, 1840
BccI	CCATC	5 cut(s)	280, 599, 674, 965, 1844
BciT130I	CCWGG	5 cut(s)	116, 500, 530, 930, 2037
BciVI	GTATCC	1 cut(s)	56
BclI	TGATCA	2 cut(s)	390, 1092
BcnI	CCSGG	1 cut(s)	331
BcoDI	GTCTC	3 cut(s)	600, 677, 1165
BcuI	ACTAGT	1 cut(s)	2003
BfaI	CTAG	9 cut(s)	462, 476, 830, 1073, 1341, 1488, 1541, 1784, 2004
BfmI	CTRYAG	2 cut(s)	945, 1957
BfuAI	ACCTGC	3 cut(s)	184, 1698, 1950
BfuI	GTATCC	1 cut(s)	56
BisI	GCNGC	8 cut(s)	90, 201, 424, 468, 945, 948, 1333, 1854
BlpI	GCTNAGC	1 cut(s)	1443
BlsI	GCNGC	8 cut(s)	91, 202, 425, 469, 946, 949, 1334, 1855
Bme1390I	CCNGG	6 cut(s)	116, 331, 500, 530, 930, 2037
Bme18I	GGWCC	3 cut(s)	1015, 1632, 1705
BmeRI	GACNNNNNGTC	1 cut(s)	1960
BmeT110I	CYCGRG	1 cut(s)	1162
BmgT120I	GGNCC	6 cut(s)	651, 671, 1015, 1076, 1632, 1705
BmiI	GGNNCC	9 cut(s)	6, 110, 589, 615, 1017, 1078, 1201, 1634, 2125
BmrFI	CCNGG	6 cut(s)	116, 331, 500, 530, 930, 2037
BmrI	ACTGGG	1 cut(s)	289
BmsI	GCATC	5 cut(s)	41, 462, 931, 1391, 1752
BmuI	ACTGGG	1 cut(s)	289
BplI	GAGNNNNNCTC	2 cut(s)	1115, 1147
BpmI	CTGGAG	3 cut(s)	482, 2058, 2120
Bpu10I	CCTNAGC	1 cut(s)	699
Bpu1102I	GCTNAGC	1 cut(s)	1443
Bpu14I	TTCGAA	1 cut(s)	1860
BpuMI	CCSGG	1 cut(s)	331
Bsa29I	ATCGAT	1 cut(s)	1155
BsaI	GGTCTC	1 cut(s)	677
BsaJI	CCNNGG	9 cut(s)	55, 90, 243, 499, 750, 928, 1195, 1218, 1500
BsaWI	WCCGGW	2 cut(s)	147, 351
BsaXI	ACNNNNNCTCC	4 cut(s)	597, 627, 1706, 1736
Bse118I	RCCGGY	2 cut(s)	14, 154
Bse1I	ACTGG	2 cut(s)	83, 284
Bse3DI	GCAATG	3 cut(s)	627, 1239, 1383
BseBI	CCWGG	5 cut(s)	116, 500, 530, 930, 2037
BseCI	ATCGAT	1 cut(s)	1155
BseDI	CCNNGG	9 cut(s)	55, 90, 243, 499, 750, 928, 1195, 1218, 1500
BseGI	GGATG	3 cut(s)	344, 1496, 1529
BseMI	GCAATG	3 cut(s)	627, 1239, 1383
BseMII	CTCAG	8 cut(s)	441, 690, 1269, 1338, 1434, 1582, 1710, 1763
BseNI	ACTGG	2 cut(s)	83, 284
BseRI	GAGGAG	4 cut(s)	260, 485, 1474, 1595
BseSI	GKGCMC	2 cut(s)	590, 2128
BseXI	GCAGC	5 cut(s)	435, 931, 959, 1344, 1840
BseYI	CCCAGC	4 cut(s)	166, 257, 632, 694
BsgI	GTGCAG	1 cut(s)	1386
Bsh1236I	CGCG	3 cut(s)	92, 599, 1710
BshFI	GGCC	8 cut(s)	89, 269, 652, 673, 704, 759, 933, 1077
BshNI	GGYRCC	3 cut(s)	4, 587, 2123
BshVI	ATCGAT	1 cut(s)	1155
BsiHKAI	GWGCWC	5 cut(s)	180, 376, 963, 980, 1826
BsiHKCI	CYCGRG	1 cut(s)	1162
BsiSI	CCGG	7 cut(s)	15, 148, 155, 330, 352, 887, 2076
BslFI	GGGAC	2 cut(s)	1488, 2014
BsmAI	GTCTC	3 cut(s)	600, 677, 1165
BsmFI	GGGAC	2 cut(s)	1488, 2014
BsmI	GAATGC	1 cut(s)	409
BsnI	GGCC	8 cut(s)	89, 269, 652, 673, 704, 759, 933, 1077
Bso31I	GGTCTC	1 cut(s)	677
BsoBI	CYCGRG	1 cut(s)	1162
Bsp119I	TTCGAA	1 cut(s)	1860
Bsp1286I	GDGCHC	7 cut(s)	180, 376, 590, 963, 980, 1826, 2128
Bsp1407I	TGTACA	1 cut(s)	1974
Bsp1720I	GCTNAGC	1 cut(s)	1443
Bsp19I	CCATGG	1 cut(s)	1218
BspACI	CCGC	9 cut(s)	71, 90, 92, 200, 229, 456, 467, 597, 1708
BspANI	GGCC	8 cut(s)	89, 269, 652, 673, 704, 759, 933, 1077
BspCNI	CTCAG	8 cut(s)	440, 691, 1270, 1337, 1435, 1581, 1709, 1764
BspDI	ATCGAT	1 cut(s)	1155
BspFNI	CGCG	3 cut(s)	92, 599, 1710
BspLI	GGNNCC	9 cut(s)	6, 110, 589, 615, 1017, 1078, 1201, 1634, 2125
BspMAI	CTGCAG	2 cut(s)	949, 1961
BspMI	ACCTGC	3 cut(s)	184, 1698, 1950
BspPI	GGATC	4 cut(s)	491, 1916, 1955, 2084
BspQI	GCTCTTC	2 cut(s)	381, 1814
BspT104I	TTCGAA	1 cut(s)	1860
BspT107I	GGYRCC	3 cut(s)	4, 587, 2123
BspTNI	GGTCTC	1 cut(s)	677
BsrDI	GCAATG	3 cut(s)	627, 1239, 1383
BsrFI	RCCGGY	2 cut(s)	14, 154
BsrGI	TGTACA	1 cut(s)	1974
BsrI	ACTGG	2 cut(s)	83, 284
BssAI	RCCGGY	2 cut(s)	14, 154
BssECI	CCNNGG	9 cut(s)	55, 90, 243, 499, 750, 928, 1195, 1218, 1500
BssT1I	CCWWGG	4 cut(s)	55, 750, 1195, 1218
Bst2UI	CCWGG	5 cut(s)	116, 500, 530, 930, 2037
Bst4CI	ACNGT	6 cut(s)	320, 368, 1184, 1612, 1642, 1655
Bst6I	CTCTTC	7 cut(s)	122, 245, 381, 585, 1026, 1814, 1857
BstAUI	TGTACA	1 cut(s)	1974
BstBI	TTCGAA	1 cut(s)	1860
BstC8I	GCNNGC	7 cut(s)	223, 227, 271, 575, 650, 714, 1310
BstDEI	CTNAG	9 cut(s)	427, 699, 1052, 1278, 1324, 1443, 1568, 1696, 1772
BstDSI	CCRYGG	2 cut(s)	90, 1218
BstENI	CCTNNNNNAGG	2 cut(s)	497, 1085
BstF5I	GGATG	3 cut(s)	344, 1496, 1529
BstFNI	CGCG	3 cut(s)	92, 599, 1710
BstHHI	GCGC	1 cut(s)	2075
BstMAI	GTCTC	3 cut(s)	600, 677, 1165
BstMWI	GCNNNNNNNGC	9 cut(s)	206, 235, 464, 839, 863, 883, 1373, 1937, 2072
BstNI	CCWGG	5 cut(s)	116, 500, 530, 930, 2037
BstNSI	RCATGY	1 cut(s)	1796
BstSCI	CCNGG	6 cut(s)	114, 329, 498, 528, 928, 2035
BstSFI	CTRYAG	2 cut(s)	945, 1957
BstSLI	GKGCMC	2 cut(s)	590, 2128
BstUI	CGCG	3 cut(s)	92, 599, 1710
BstV1I	GCAGC	5 cut(s)	435, 931, 959, 1344, 1840
BstXI	CCANNNNNNTGG	1 cut(s)	221
Bsu15I	ATCGAT	1 cut(s)	1155
BsuI	GTATCC	1 cut(s)	56
BsuRI	GGCC	8 cut(s)	89, 269, 652, 673, 704, 759, 933, 1077
BsuTUI	ATCGAT	1 cut(s)	1155
BtgI	CCRYGG	2 cut(s)	90, 1218
BtgZI	GCGATG	1 cut(s)	485
BtsCI	GGATG	3 cut(s)	344, 1496, 1529
BtsI	GCAGTG	2 cut(s)	280, 777
BtsIMutI	CAGTG	4 cut(s)	42, 280, 777, 1608
BveI	ACCTGC	3 cut(s)	184, 1698, 1950
Cac8I	GCNNGC	7 cut(s)	223, 227, 271, 575, 650, 714, 1310
CaiI	CAGNNNCTG	2 cut(s)	279, 1771
CfoI	GCGC	1 cut(s)	2075
Cfr10I	RCCGGY	2 cut(s)	14, 154
Cfr13I	GGNCC	6 cut(s)	651, 671, 1015, 1076, 1632, 1705
Cfr42I	CCGCGG	1 cut(s)	93
ClaI	ATCGAT	1 cut(s)	1155
CseI	GACGC	2 cut(s)	227, 588
Csp6I	GTAC	5 cut(s)	306, 625, 1212, 1714, 1975
CspCI	CAANNNNNGTGG	2 cut(s)	349, 384
CviAII	CATG	6 cut(s)	85, 570, 850, 1219, 1430, 1793
CviQI	GTAC	5 cut(s)	306, 625, 1212, 1714, 1975
DdeI	CTNAG	9 cut(s)	427, 699, 1052, 1278, 1324, 1443, 1568, 1696, 1772
DriI	GACNNNNNGTC	1 cut(s)	1960
EaeI	YGGCCR	2 cut(s)	87, 931
Eam1104I	CTCTTC	7 cut(s)	122, 245, 381, 585, 1026, 1814, 1857
Eam1105I	GACNNNNNGTC	1 cut(s)	1960
EarI	CTCTTC	7 cut(s)	122, 245, 381, 585, 1026, 1814, 1857
Ecl136II	GAGCTC	2 cut(s)	374, 978
Eco130I	CCWWGG	4 cut(s)	55, 750, 1195, 1218
Eco147I	AGGCCT	2 cut(s)	704, 759
Eco24I	GRGCYC	2 cut(s)	376, 980
Eco31I	GGTCTC	1 cut(s)	677
Eco47I	GGWCC	3 cut(s)	1015, 1632, 1705
Eco53kI	GAGCTC	2 cut(s)	374, 978
Eco57I	CTGAAG	6 cut(s)	146, 362, 888, 938, 1385, 1892
Eco88I	CYCGRG	1 cut(s)	1162
EcoICRI	GAGCTC	2 cut(s)	374, 978
EcoNI	CCTNNNNNAGG	2 cut(s)	497, 1085
EcoO109I	RGGNCCY	2 cut(s)	1076, 1632
EcoRI	GAATTC	1 cut(s)	720
EcoRII	CCWGG	5 cut(s)	114, 498, 528, 928, 2035
EcoT14I	CCWWGG	4 cut(s)	55, 750, 1195, 1218
EcoT22I	ATGCAT	1 cut(s)	1798
EcoT38I	GRGCYC	2 cut(s)	376, 980
ErhI	CCWWGG	4 cut(s)	55, 750, 1195, 1218
FaeI	CATG	6 cut(s)	88, 573, 853, 1222, 1433, 1796
FaqI	GGGAC	2 cut(s)	1488, 2014
FatI	CATG	6 cut(s)	84, 569, 849, 1218, 1429, 1792
FauI	CCCGC	2 cut(s)	78, 222
FauNDI	CATATG	1 cut(s)	982
FbaI	TGATCA	2 cut(s)	390, 1092
FblI	GTMKAC	2 cut(s)	1509, 1896
Fnu4HI	GCNGC	8 cut(s)	90, 201, 424, 468, 945, 948, 1333, 1854
FokI	GGATG	3 cut(s)	331, 1483, 1516
FriOI	GRGCYC	2 cut(s)	376, 980
Fsp4HI	GCNGC	8 cut(s)	90, 201, 424, 468, 945, 948, 1333, 1854
FspBI	CTAG	9 cut(s)	462, 476, 830, 1073, 1341, 1488, 1541, 1784, 2004
GlaI	GCGC	1 cut(s)	2074
GluI	GCNGC	8 cut(s)	90, 201, 424, 468, 945, 948, 1333, 1854
GsaI	CCCAGC	4 cut(s)	170, 261, 636, 698
GsuI	CTGGAG	3 cut(s)	482, 2058, 2120
HaeIII	GGCC	8 cut(s)	89, 269, 652, 673, 704, 759, 933, 1077
HapII	CCGG	7 cut(s)	15, 148, 155, 330, 352, 887, 2076
HgaI	GACGC	2 cut(s)	227, 588
HhaI	GCGC	1 cut(s)	2075
Hin1II	CATG	6 cut(s)	88, 573, 853, 1222, 1433, 1796
Hin6I	GCGC	1 cut(s)	2073
HinP1I	GCGC	1 cut(s)	2073
HincII	GTYRAC	5 cut(s)	1138, 1465, 1510, 1897, 2013
HindII	GTYRAC	5 cut(s)	1138, 1465, 1510, 1897, 2013
HinfI	GANTC	8 cut(s)	41, 95, 290, 396, 431, 907, 1233, 1674
HpaII	CCGG	7 cut(s)	15, 148, 155, 330, 352, 887, 2076
Hpy166II	GTNNAC	8 cut(s)	894, 1006, 1138, 1465, 1510, 1705, 1897, 2013
Hpy188I	TCNGA	9 cut(s)	244, 381, 395, 430, 1097, 1279, 1396, 1501, 1681
Hpy188III	TCNNGA	7 cut(s)	400, 603, 968, 1007, 1162, 1603, 1671
Hpy8I	GTNNAC	8 cut(s)	894, 1006, 1138, 1465, 1510, 1705, 1897, 2013
Hpy99I	CGWCG	2 cut(s)	221, 604
HpyAV	CCTTC	5 cut(s)	259, 295, 749, 1323, 2104
HpyCH4III	ACNGT	6 cut(s)	320, 368, 1184, 1612, 1642, 1655
HpyCH4IV	ACGT	2 cut(s)	27, 1596
HpyF10VI	GCNNNNNNNGC	9 cut(s)	206, 235, 464, 839, 863, 883, 1373, 1937, 2072
HpyF3I	CTNAG	9 cut(s)	427, 699, 1052, 1278, 1324, 1443, 1568, 1696, 1772
HpySE526I	ACGT	2 cut(s)	27, 1596
Hsp92II	CATG	6 cut(s)	88, 573, 853, 1222, 1433, 1796
HspAI	GCGC	1 cut(s)	2073
Ksp22I	TGATCA	2 cut(s)	390, 1092
KspI	CCGCGG	1 cut(s)	93
LguI	GCTCTTC	2 cut(s)	381, 1814
LmnI	GCTCC	7 cut(s)	108, 175, 235, 371, 958, 975, 1397
Lsp1109I	GCAGC	5 cut(s)	435, 931, 959, 1344, 1840
LweI	GCATC	5 cut(s)	41, 462, 931, 1391, 1752
MaeI	CTAG	9 cut(s)	462, 476, 830, 1073, 1341, 1488, 1541, 1784, 2004
MaeII	ACGT	2 cut(s)	27, 1596
MaeIII	GTNAC	5 cut(s)	275, 322, 1420, 1808, 2048
MfeI	CAATTG	2 cut(s)	1206, 1248
MhlI	GDGCHC	7 cut(s)	180, 376, 590, 963, 980, 1826, 2128
MlsI	TGGCCA	1 cut(s)	933
MluNI	TGGCCA	1 cut(s)	933
MlyI	GAGTC	5 cut(s)	50, 104, 425, 901, 1227
MmeI	TCCRAC	1 cut(s)	1341
Mox20I	TGGCCA	1 cut(s)	933
Mph1103I	ATGCAT	1 cut(s)	1798
MscI	TGGCCA	1 cut(s)	933
MseI	TTAA	1 cut(s)	708
Msp20I	TGGCCA	1 cut(s)	933
MspA1I	CMGCKG	3 cut(s)	73, 92, 698
MspI	CCGG	7 cut(s)	15, 148, 155, 330, 352, 887, 2076
MspR9I	CCNGG	6 cut(s)	116, 331, 500, 530, 930, 2037
MunI	CAATTG	2 cut(s)	1206, 1248
Mva1269I	GAATGC	1 cut(s)	409
MvaI	CCWGG	5 cut(s)	116, 500, 530, 930, 2037
MvnI	CGCG	3 cut(s)	92, 599, 1710
MwoI	GCNNNNNNNGC	9 cut(s)	206, 235, 464, 839, 863, 883, 1373, 1937, 2072
NciI	CCSGG	1 cut(s)	331
NcoI	CCATGG	1 cut(s)	1218
NdeI	CATATG	1 cut(s)	982
NlaIII	CATG	6 cut(s)	88, 573, 853, 1222, 1433, 1796
NlaIV	GGNNCC	9 cut(s)	6, 110, 589, 615, 1017, 1078, 1201, 1634, 2125
NmuCI	GTSAC	5 cut(s)	275, 322, 1420, 1808, 2048
NsiI	ATGCAT	1 cut(s)	1798
NspI	RCATGY	1 cut(s)	1796
NspV	TTCGAA	1 cut(s)	1860
PaeR7I	CTCGAG	1 cut(s)	1162
PaqCI	CACCTGC	2 cut(s)	184, 1698
PceI	AGGCCT	2 cut(s)	704, 759
PciSI	GCTCTTC	2 cut(s)	381, 1814
PcsI	WCGNNNNNNNCGW	2 cut(s)	222, 1707
PctI	GAATGC	1 cut(s)	409
PfeI	GAWTC	3 cut(s)	290, 396, 1674
PfoI	TCCNGGA	1 cut(s)	528
PkrI	GCNGC	8 cut(s)	91, 202, 425, 469, 946, 949, 1334, 1855
PleI	GAGTC	5 cut(s)	49, 103, 425, 901, 1227
PpsI	GAGTC	5 cut(s)	49, 103, 425, 901, 1227
PpuMI	RGGWCCY	1 cut(s)	1632
Psp124BI	GAGCTC	2 cut(s)	376, 980
Psp1406I	AACGTT	1 cut(s)	1596
Psp5II	RGGWCCY	1 cut(s)	1632
Psp6I	CCWGG	5 cut(s)	114, 498, 528, 928, 2035
PspFI	CCCAGC	4 cut(s)	166, 257, 632, 694
PspGI	CCWGG	5 cut(s)	114, 498, 528, 928, 2035
PspN4I	GGNNCC	9 cut(s)	6, 110, 589, 615, 1017, 1078, 1201, 1634, 2125
PspPI	GGNCC	6 cut(s)	651, 671, 1015, 1076, 1632, 1705
PspPPI	RGGWCCY	1 cut(s)	1632
PstI	CTGCAG	2 cut(s)	949, 1961
PstNI	CAGNNNCTG	2 cut(s)	279, 1771
PvuII	CAGCTG	1 cut(s)	698
RsaI	GTAC	5 cut(s)	307, 626, 1213, 1715, 1976
RsaNI	GTAC	5 cut(s)	306, 625, 1212, 1714, 1975
SacI	GAGCTC	2 cut(s)	376, 980
SacII	CCGCGG	1 cut(s)	93
SalI	GTCGAC	2 cut(s)	1508, 1895
SapI	GCTCTTC	2 cut(s)	381, 1814
SaqAI	TTAA	1 cut(s)	708
SatI	GCNGC	8 cut(s)	90, 201, 424, 468, 945, 948, 1333, 1854
Sau96I	GGNCC	6 cut(s)	651, 671, 1015, 1076, 1632, 1705
SchI	GAGTC	5 cut(s)	50, 104, 425, 901, 1227
ScrFI	CCNGG	6 cut(s)	116, 331, 500, 530, 930, 2037
SduI	GDGCHC	7 cut(s)	180, 376, 590, 963, 980, 1826, 2128
SfaNI	GCATC	5 cut(s)	41, 462, 931, 1391, 1752
SfcI	CTRYAG	2 cut(s)	945, 1957
Sfr274I	CTCGAG	1 cut(s)	1162
Sfr303I	CCGCGG	1 cut(s)	93
SfuI	TTCGAA	1 cut(s)	1860
SgrBI	CCGCGG	1 cut(s)	93
SinI	GGWCC	3 cut(s)	1015, 1632, 1705
SlaI	CTCGAG	1 cut(s)	1162
SmlI	CTYRAG	1 cut(s)	1162
SmoI	CTYRAG	1 cut(s)	1162
SpeI	ACTAGT	1 cut(s)	2003
SseBI	AGGCCT	2 cut(s)	704, 759
SsiI	CCGC	9 cut(s)	71, 90, 92, 200, 229, 456, 467, 597, 1708
SspMI	CTAG	9 cut(s)	462, 476, 830, 1073, 1341, 1488, 1541, 1784, 2004
SstI	GAGCTC	2 cut(s)	376, 980
StuI	AGGCCT	2 cut(s)	704, 759
StyD4I	CCNGG	6 cut(s)	114, 329, 498, 528, 928, 2035
StyI	CCWWGG	4 cut(s)	55, 750, 1195, 1218
TaaI	ACNGT	6 cut(s)	320, 368, 1184, 1612, 1642, 1655
TaiI	ACGT	2 cut(s)	30, 1599
TaqI	TCGA	7 cut(s)	1155, 1163, 1509, 1672, 1860, 1896, 1911
TatI	WGTACW	1 cut(s)	1974
TauI	GCSGC	3 cut(s)	92, 203, 470
TfiI	GAWTC	3 cut(s)	290, 396, 1674
Tru1I	TTAA	1 cut(s)	708
Tru9I	TTAA	1 cut(s)	708
TscAI	CASTG	4 cut(s)	42, 280, 784, 1615
TseFI	GTSAC	5 cut(s)	275, 322, 1420, 1808, 2048
TseI	GCWGC	5 cut(s)	423, 944, 947, 1332, 1853
Tsp45I	GTSAC	5 cut(s)	275, 322, 1420, 1808, 2048
TspGWI	ACGGA	1 cut(s)	693
TspRI	CASTG	4 cut(s)	42, 280, 784, 1615
VpaK11BI	GGWCC	3 cut(s)	1015, 1632, 1705
XagI	CCTNNNNNAGG	2 cut(s)	497, 1085
XapI	RAATTY	2 cut(s)	411, 720
XceI	RCATGY	1 cut(s)	1796
XhoI	CTCGAG	1 cut(s)	1162
XmiI	GTMKAC	2 cut(s)	1509, 1896
XspI	CTAG	9 cut(s)	462, 476, 830, 1073, 1341, 1488, 1541, 1784, 2004
Zsp2I	ATGCAT	1 cut(s)	1798

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.