Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0009519

Physical Location & Seq

Genomic Coordinates Reverse (-)

26306530 .. 26314456

Gene Structure 7927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1182800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2490 bp

ATGAAATCCGCCACCAAAGTCTCGCTCAACCCGTTCGTCGCCTACGAGCACAAGAGGGATGCTTATGGATTTGCTGTGAGGCCTCAGCATGTACAACGATACCGAGAATATGCCAGTATCTACAAGGAAGAAGAGGAGGAAAGATCAGAAAGGTGGAAGTCTTTCCTGGAACTACAAGCAGAGTCTACTGAATTGCCTGTTGATGGATTATCAAAGGGACAAGATAACCAGACCTTGCTCGTTCAAGCCTCAGAGAAAGAACTAGGCTCCAAATCGGAGAAGGGTGGTGATGACTACGATTTAAGTGCCCAGAAGACAGGTTCTGGTTCTCCAACCAAAAATGATAATGACAAGGAGGAACTGGCAGATAACGACAAAAAAGCTCATGGGATTCAAATATGGAATGAGATTAGACCTTCCCTTCATGCCATTGAGAGTTTGATGAGTATTCGTGTAAAGAAGAAGAAGAGTTTATCAAAGCATGAGCAGGACACAGGAACTGGGAAGCCACTTACTTCTATTGAAGAGGCTAGATCCCCAAAAGGAGCATCTGAGGAGGACTCTGAGGATGTGTTTTATGACGTGGAAAGGTCAGACCCAGTTCAAGATGTCACTTCGAGTGACAGTCAGAGTGCGTCTGCAACTGGTGTTGCTTCTGACACGGTTGATTCAGAATCTTTATTTCCTTGGAAAGAAGAATTGGAGGTTCTTGTTCGTGGTGGAGTGCCAATGGCTCTCAGGGGAGAGCTTTGGCAAGCCTTTGTGGGTGTGAAGGCACGGCGCGTGGATAACTATTACCAGGATCTGCTAGCTTCTGAAACTAATGCTGGTAGTGATGTGGAAAAACATAGCTCGGAATTAGACAGTAATAGCAAATTGTCAACAACAGATCCTGCATCTGTACCTGAAAAATGGAGAGGGCAAATTGAGAAGGATCTACCTCGAACATTTCCAGGTCACCCTGCTCTTGATGTAGATGGTAGAAATGCTTTGAGGCGTTTGCTTACCGCATATGCACGACACAATCCCACTGTTGGGTACTGTCAGGCCATGAATTTTTTTGCCGGCTTATTACTACTTCTCATGCCTGAAGAAAATGCCTTTTGGGCTTTGATGGGACTCTTAGATGATTATTTTGATGGCTATTACTCAGAGGAAATGATAGAATCTCAGGTGGATCAACTTGTTTTTGAGGAGTTGGTGCATGAGAGATTTCCTAAATTGGTCAACCATCTAGATTACCTGGGAGTGCAGGTGGCTTGGGTTACTGGACCATGGTTCCTTACCATTTTCATGAACATGCTTCCATGGGAAAGTGTTCTTCGAGTCTGGGACGTTCTTCTTTTTGAGGGGAACCGTGTGATGCTATTCAGGACAGCACTTGCTTTGATGGAGTTATATGGCCCTGCGCTAGTTACTACCAAGGATGCTGGAGATGCAGTTACTCTTCTGCAATCGCTGGCTGGCTCTACATTTGATAGCAGTCAACTGGTATTGACAGCTTGCATGGGTTACCAAAATGTAAATGAAACTAGATTACAAGAGTTGAGAAATAAACATCGGCCAGCTGTAATTGTCGCTATTGAGGAAAGATCCAAGGGACTTCGGGCTTGGAAAGATTCTCAGGGTCTAGCATCAAAGCTATATAATTTTAAGCAAGATCCTAAATCATTGATAATAGAGACAAAGAAAGCAGAACGAAATACACAGACAAATGGTGATTTATCTCGTTCAGAGTCTGGGTCCTCTAATGCAGATGAAATTCTAATTAGCCTGACTGGAAATGGGGAAGTAGATTCTGTTCCAGATCTTCATGAGCAGGTCGTATGGTTGAAGGTTGAATTATGTAAGTTGCTGGAGGATAAAAGATCTGCTGAACTCAGAGCTGAGGAGTTGGAGACAGCATTGATGGAGATGGTCAAGCAAGATAATCGTCGGCAATTGAGTGCCAAGGTTGAGCAATTAGAGCAAGAGGTTGCTGAGCTTCGCCGAGCCCTTTCTGATAAGCAGGAACAGGAGGGTGTCATGCTCCAGGTCTTAATGCGAGTAGAACAAGAGCAGAGACTAACAGAAGATGCCCGCAGATTTTCTGAGCAAGATGCAGAAGCACAGAGATATGCTGCTCAAGTACTTCAGGAGAAGTATGAAGAGGCTGCTGCTGCGCTTGCGGAAATGGAGAAGAGAGCTGTTATGGCAGAATCTATGTTGGAGGCTACTTTGCAATACCAATCTGGTCAAATTAAAACACAATCTCCACGATCTGTATCTTCACCAGTACAAAGCAATCAAGATCTGACACAAGAAATTCCTGCTAGAAGGATTAGTTTGCTAGGTCGACCATTTGGCCTTGGCTGGCGCGACAGGAACAAGGGAAAACCTGCTAACAGTGAGGAGCCAAATGATGGCAAGTCTACCGGTGAAGGACAGAGCCCCACTGCAGAAGCACAAGTAAAAGAGACGAATGGCATTAAAGCGGAAGATAAAGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

830

Amino Acids

93.12

Weight (kDa)

4.94

Isoelectric Point (pI)

58.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	245 - 469	1e-52	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	330 - 488	7.2e-27	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009519)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55020 AT3G55020 AT3G55020
fragaria_vesca	FvH4_7g20590 FvH4_7g20590
malus_domestica	MD01G1114800.v1.1 MD07G1182800.v1.1
prunus_persica	Prupe.2G221500_v2.0.a1 Prupe.2G221500_v2.0.a1
pyrus_communis	pycom01g14370 pycom07g17540
rosa_chinensis	RchiOBHm_Chr1g0364631
rosa_laevigata	RLG00000027471
rosa_multiflora	Rmu_ssc0000282.1_g000019
rosa_roxburghii	Rroxscaffold_4G00291790 Rroxscaffold_4G00292210
rosa_rugosa	Rorug01G0317200
rosa_samantha	Rh1AG326200 Rh1BG287400 Rh1CG304200 Rh1DG319100
rosa_wichuraiana	Rw1G028900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1243
Acc36I	ACCTGC	3 cut(s)	1243, 1810, 2386
AccB7I	CCANNNNNTGG	1 cut(s)	2402
AccI	GTMKAC	3 cut(s)	185, 2335, 2411
AccII	CGCG	2 cut(s)	783, 2358
AciI	CCGC	5 cut(s)	9, 1008, 2080, 2168, 2474
AclWI	GGATC	7 cut(s)	528, 810, 884, 942, 1185, 1587, 1655
AcoI	YGGCCR	1 cut(s)	1562
AcsI	RAATTY	3 cut(s)	1054, 1761, 2304
AcuI	CTGAAG	2 cut(s)	1110, 2117
AfaI	GTAC	5 cut(s)	93, 903, 1040, 2130, 2277
AfiI	CCNNNNNNNGG	4 cut(s)	203, 1034, 1035, 2402
AgeI	ACCGGT	1 cut(s)	2414
AgsI	TTSAA	6 cut(s)	245, 395, 524, 605, 1834, 1841
AjiI	CACGTC	1 cut(s)	583
AjnI	CCWGG	5 cut(s)	165, 798, 952, 1242, 2031
AjuI	GAANNNNNNNTTGG	2 cut(s)	683, 715
Alw21I	GWGCWC	1 cut(s)	51
Alw26I	GTCTC	5 cut(s)	25, 1676, 1892, 2056, 2450
AlwI	GGATC	7 cut(s)	528, 810, 884, 942, 1185, 1587, 1655
AlwNI	CAGNNNCTG	5 cut(s)	323, 500, 805, 893, 1739
AoxI	GGCC	5 cut(s)	80, 1047, 1402, 1562, 2344
ApeKI	GCWGC	4 cut(s)	2120, 2153, 2156, 2159
ApoI	RAATTY	3 cut(s)	1054, 1761, 2304
AsiGI	ACCGGT	1 cut(s)	2414
Asp700I	GAANNNNTTC	2 cut(s)	161, 1317
AspLEI	GCGC	4 cut(s)	783, 1411, 2164, 2358
AspS9I	GGNCC	3 cut(s)	1271, 1403, 1743
AsuHPI	GGTGA	5 cut(s)	299, 950, 1730, 2262, 2429
AsuNHI	GCTAGC	1 cut(s)	808
AvaII	GGWCC	2 cut(s)	1271, 1743
BaeGI	GKGCMC	1 cut(s)	310
BanII	GRGCYC	2 cut(s)	1996, 2432
BbsI	GAAGAC	1 cut(s)	320
Bbv12I	GWGCWC	1 cut(s)	51
BbvCI	CCTCAGC	2 cut(s)	84, 1887
BbvI	GCAGC	4 cut(s)	2107, 2140, 2143, 2146
BccI	CCATC	9 cut(s)	197, 971, 1108, 1133, 1239, 1384, 1903, 1909, 2396
BceAI	ACGGC	1 cut(s)	794
BcgI	CGANNNNNNTGC	4 cut(s)	287, 321, 1913, 1947
BciT130I	CCWGG	5 cut(s)	167, 800, 954, 1244, 2033
BcoDI	GTCTC	5 cut(s)	25, 1676, 1892, 2056, 2450
BfaI	CTAG	9 cut(s)	263, 531, 809, 1235, 1412, 1533, 1631, 2313, 2330
BfmI	CTRYAG	1 cut(s)	2436
BfuAI	ACCTGC	3 cut(s)	1243, 1810, 2386
BglI	GCCNNNNNGGC	1 cut(s)	1106
BglII	AGATCT	3 cut(s)	1807, 1868, 2290
BisI	GCNGC	4 cut(s)	2121, 2154, 2157, 2160
BlpI	GCTNAGC	1 cut(s)	1980
BlsI	GCNGC	4 cut(s)	2122, 2155, 2158, 2161
BmcAI	AGTACT	1 cut(s)	2130
Bme1390I	CCNGG	5 cut(s)	167, 800, 954, 1244, 2033
Bme18I	GGWCC	2 cut(s)	1271, 1743
BmgBI	CACGTC	1 cut(s)	583
BmgT120I	GGNCC	3 cut(s)	1271, 1403, 1743
BmiI	GGNNCC	5 cut(s)	268, 1280, 1355, 1744, 2394
BmrFI	CCNGG	5 cut(s)	167, 800, 954, 1244, 2033
BmrI	ACTGGG	2 cut(s)	510, 593
BmsI	GCATC	9 cut(s)	49, 557, 905, 1353, 1417, 1426, 1643, 2065, 2089
BmtI	GCTAGC	1 cut(s)	812
BmuI	ACTGGG	2 cut(s)	510, 593
BpiI	GAAGAC	1 cut(s)	320
BplI	GAGNNNNNCTC	2 cut(s)	545, 577
BpmI	CTGGAG	3 cut(s)	1452, 1877, 2015
Bpu10I	CCTNAGC	2 cut(s)	84, 1887
Bpu1102I	GCTNAGC	1 cut(s)	1980
BpuEI	CTTGAG	1 cut(s)	2109
BsaBI	GATNNNNATC	1 cut(s)	2263
BsaJI	CCNNGG	8 cut(s)	686, 1243, 1274, 1307, 1422, 1596, 1950, 2347
BsaWI	WCCGGW	1 cut(s)	2414
BsaXI	ACNNNNNCTCC	6 cut(s)	1239, 1269, 1425, 1455, 2236, 2266
Bsc4I	CCNNNNNNNGG	4 cut(s)	203, 1034, 1035, 2402
Bse118I	RCCGGY	2 cut(s)	1064, 2414
Bse1I	ACTGG	9 cut(s)	114, 366, 505, 599, 649, 1273, 1494, 1783, 2273
Bse8I	GATNNNNATC	1 cut(s)	2263
BseBI	CCWGG	5 cut(s)	167, 800, 954, 1244, 2033
BseDI	CCNNGG	8 cut(s)	686, 1243, 1274, 1307, 1422, 1596, 1950, 2347
BseGI	GGATG	3 cut(s)	64, 574, 1432
BseJI	GATNNNNATC	1 cut(s)	2263
BseLI	CCNNNNNNNGG	4 cut(s)	203, 1034, 1035, 2402
BseNI	ACTGG	9 cut(s)	114, 366, 505, 599, 649, 1273, 1494, 1783, 2273
BseRI	GAGGAG	5 cut(s)	149, 569, 1208, 1904, 2405
BseSI	GKGCMC	1 cut(s)	310
BseXI	GCAGC	4 cut(s)	2107, 2140, 2143, 2146
BsgI	GTGCAG	1 cut(s)	1271
Bsh1236I	CGCG	2 cut(s)	783, 2358
BshFI	GGCC	5 cut(s)	82, 1049, 1404, 1564, 2346
BshTI	ACCGGT	1 cut(s)	2414
BsiHKAI	GWGCWC	1 cut(s)	51
BsiSI	CCGG	2 cut(s)	1065, 2415
BslFI	GGGAC	4 cut(s)	231, 1131, 1346, 1614
BslI	CCNNNNNNNGG	4 cut(s)	203, 1034, 1035, 2402
BsmAI	GTCTC	5 cut(s)	25, 1676, 1892, 2056, 2450
BsmBI	CGTCTC	1 cut(s)	2450
BsmFI	GGGAC	4 cut(s)	231, 1131, 1346, 1614
BsnI	GGCC	5 cut(s)	82, 1049, 1404, 1564, 2346
Bsp1286I	GDGCHC	4 cut(s)	51, 310, 1996, 2432
Bsp1407I	TGTACA	1 cut(s)	91
Bsp1720I	GCTNAGC	1 cut(s)	1980
Bsp19I	CCATGG	2 cut(s)	1274, 1307
BspACI	CCGC	5 cut(s)	9, 1008, 2080, 2168, 2474
BspANI	GGCC	5 cut(s)	82, 1049, 1404, 1564, 2346
BspFNI	CGCG	2 cut(s)	783, 2358
BspHI	TCATGA	2 cut(s)	1293, 1813
BspLI	GGNNCC	5 cut(s)	268, 1280, 1355, 1744, 2394
BspMAI	CTGCAG	1 cut(s)	2440
BspMI	ACCTGC	3 cut(s)	1243, 1810, 2386
BspOI	GCTAGC	1 cut(s)	812
BspPI	GGATC	7 cut(s)	528, 810, 884, 942, 1185, 1587, 1655
BsrFI	RCCGGY	2 cut(s)	1064, 2414
BsrGI	TGTACA	1 cut(s)	91
BsrI	ACTGG	9 cut(s)	114, 366, 505, 599, 649, 1273, 1494, 1783, 2273
BssAI	RCCGGY	2 cut(s)	1064, 2414
BssECI	CCNNGG	8 cut(s)	686, 1243, 1274, 1307, 1422, 1596, 1950, 2347
BssT1I	CCWWGG	7 cut(s)	686, 1274, 1307, 1422, 1596, 1950, 2347
Bst2UI	CCWGG	5 cut(s)	167, 800, 954, 1244, 2033
Bst4CI	ACNGT	7 cut(s)	626, 664, 866, 1033, 1043, 1358, 2387
Bst6I	CTCTTC	6 cut(s)	126, 461, 519, 1452, 2142, 2174
BstAUI	TGTACA	1 cut(s)	91
BstDSI	CCRYGG	2 cut(s)	1274, 1307
BstEII	GGTNACC	2 cut(s)	956, 1511
BstF5I	GGATG	3 cut(s)	64, 574, 1432
BstFNI	CGCG	2 cut(s)	783, 2358
BstHHI	GCGC	4 cut(s)	783, 1411, 2164, 2358
BstMAI	GTCTC	5 cut(s)	25, 1676, 1892, 2056, 2450
BstMWI	GCNNNNNNNGC	6 cut(s)	1106, 1436, 1966, 2159, 2165, 2192
BstNI	CCWGG	5 cut(s)	167, 800, 954, 1244, 2033
BstNSI	RCATGY	2 cut(s)	92, 1303
BstPI	GGTNACC	2 cut(s)	956, 1511
BstSCI	CCNGG	5 cut(s)	165, 798, 952, 1242, 2031
BstSFI	CTRYAG	1 cut(s)	2436
BstSLI	GKGCMC	1 cut(s)	310
BstUI	CGCG	2 cut(s)	783, 2358
BstV1I	GCAGC	4 cut(s)	2107, 2140, 2143, 2146
BstV2I	GAAGAC	1 cut(s)	320
BstX2I	RGATCY	9 cut(s)	533, 802, 889, 934, 1592, 1660, 1807, 1868, 2290
BstYI	RGATCY	9 cut(s)	533, 802, 889, 934, 1592, 1660, 1807, 1868, 2290
BsuRI	GGCC	5 cut(s)	82, 1049, 1404, 1564, 2346
BtgI	CCRYGG	2 cut(s)	1274, 1307
BtrI	CACGTC	1 cut(s)	583
BtsCI	GGATG	3 cut(s)	64, 574, 1432
BtsI	GCAGTG	1 cut(s)	2433
BtsIMutI	CAGTG	3 cut(s)	1029, 2392, 2433
BveI	ACCTGC	3 cut(s)	1243, 1810, 2386
CaiI	CAGNNNCTG	5 cut(s)	323, 500, 805, 893, 1739
CciI	TCATGA	2 cut(s)	1293, 1813
CfoI	GCGC	4 cut(s)	783, 1411, 2164, 2358
Cfr10I	RCCGGY	2 cut(s)	1064, 2414
Cfr13I	GGNCC	3 cut(s)	1271, 1403, 1743
CseI	GACGC	1 cut(s)	624
Csp6I	GTAC	5 cut(s)	92, 902, 1039, 2129, 2276
CspAI	ACCGGT	1 cut(s)	2414
CviQI	GTAC	5 cut(s)	92, 902, 1039, 2129, 2276
EaeI	YGGCCR	1 cut(s)	1562
Eam1104I	CTCTTC	6 cut(s)	126, 461, 519, 1452, 2142, 2174
EarI	CTCTTC	6 cut(s)	126, 461, 519, 1452, 2142, 2174
Eco130I	CCWWGG	7 cut(s)	686, 1274, 1307, 1422, 1596, 1950, 2347
Eco147I	AGGCCT	1 cut(s)	82
Eco24I	GRGCYC	2 cut(s)	1996, 2432
Eco47I	GGWCC	2 cut(s)	1271, 1743
Eco57I	CTGAAG	2 cut(s)	1110, 2117
Eco91I	GGTNACC	2 cut(s)	956, 1511
EcoO109I	RGGNCCY	1 cut(s)	1743
EcoO65I	GGTNACC	2 cut(s)	956, 1511
EcoRII	CCWGG	5 cut(s)	165, 798, 952, 1242, 2031
EcoT14I	CCWWGG	7 cut(s)	686, 1274, 1307, 1422, 1596, 1950, 2347
EcoT38I	GRGCYC	2 cut(s)	1996, 2432
ErhI	CCWWGG	7 cut(s)	686, 1274, 1307, 1422, 1596, 1950, 2347
Esp3I	CGTCTC	1 cut(s)	2450
FaqI	GGGAC	4 cut(s)	231, 1131, 1346, 1614
FauI	CCCGC	1 cut(s)	2087
FauNDI	CATATG	1 cut(s)	1012
FblI	GTMKAC	3 cut(s)	185, 2335, 2411
Fnu4HI	GCNGC	4 cut(s)	2121, 2154, 2157, 2160
FokI	GGATG	3 cut(s)	71, 581, 1439
FriOI	GRGCYC	2 cut(s)	1996, 2432
Fsp4HI	GCNGC	4 cut(s)	2121, 2154, 2157, 2160
FspBI	CTAG	9 cut(s)	263, 531, 809, 1235, 1412, 1533, 1631, 2313, 2330
GlaI	GCGC	4 cut(s)	782, 1410, 2163, 2357
GluI	GCNGC	4 cut(s)	2121, 2154, 2157, 2160
GsuI	CTGGAG	3 cut(s)	1452, 1877, 2015
HaeIII	GGCC	5 cut(s)	82, 1049, 1404, 1564, 2346
HapII	CCGG	2 cut(s)	1065, 2415
HgaI	GACGC	1 cut(s)	624
HhaI	GCGC	4 cut(s)	783, 1411, 2164, 2358
Hin6I	GCGC	4 cut(s)	781, 1409, 2162, 2356
HinP1I	GCGC	4 cut(s)	781, 1409, 2162, 2356
HincII	GTYRAC	4 cut(s)	882, 1228, 1487, 2336
HindII	GTYRAC	4 cut(s)	882, 1228, 1487, 2336
HpaII	CCGG	2 cut(s)	1065, 2415
HphI	GGTGA	5 cut(s)	299, 950, 1730, 2262, 2429
Hpy166II	GTNNAC	6 cut(s)	186, 882, 1228, 1487, 2336, 2412
Hpy188III	TCNNGA	9 cut(s)	605, 968, 1235, 1294, 1372, 1805, 1814, 2135, 2288
Hpy8I	GTNNAC	6 cut(s)	186, 882, 1228, 1487, 2336, 2412
Hpy99I	CGWCG	2 cut(s)	41, 1938
HpyAV	CCTTC	8 cut(s)	274, 426, 431, 766, 925, 1828, 2310, 2414
HpyCH4III	ACNGT	7 cut(s)	626, 664, 866, 1033, 1043, 1358, 2387
HpyCH4IV	ACGT	2 cut(s)	582, 1335
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1106, 1436, 1966, 2159, 2165, 2192
HpySE526I	ACGT	2 cut(s)	582, 1335
HspAI	GCGC	4 cut(s)	781, 1409, 2162, 2356
KroI	GCCGGC	1 cut(s)	1064
KroNI	GCCGGC	1 cut(s)	1066
LmnI	GCTCC	4 cut(s)	272, 545, 2034, 2392
Lsp1109I	GCAGC	4 cut(s)	2107, 2140, 2143, 2146
LweI	GCATC	9 cut(s)	49, 557, 905, 1353, 1417, 1426, 1643, 2065, 2089
MaeI	CTAG	9 cut(s)	263, 531, 809, 1235, 1412, 1533, 1631, 2313, 2330
MaeII	ACGT	2 cut(s)	582, 1335
MaeIII	GTNAC	7 cut(s)	610, 620, 956, 1264, 1414, 1441, 1511
MfeI	CAATTG	1 cut(s)	1940
MflI	RGATCY	9 cut(s)	533, 802, 889, 934, 1592, 1660, 1807, 1868, 2290
MhlI	GDGCHC	4 cut(s)	51, 310, 1996, 2432
MlyI	GAGTC	5 cut(s)	191, 554, 1113, 1335, 1745
MmeI	TCCRAC	3 cut(s)	356, 1875, 2187
MroNI	GCCGGC	1 cut(s)	1064
MroXI	GAANNNNTTC	2 cut(s)	161, 1317
MseI	TTAA	5 cut(s)	302, 1653, 2039, 2241, 2469
MslI	CAYNNNNRTG	2 cut(s)	1292, 1298
MspA1I	CMGCKG	1 cut(s)	1568
MspI	CCGG	2 cut(s)	1065, 2415
MspR9I	CCNGG	5 cut(s)	167, 800, 954, 1244, 2033
MunI	CAATTG	1 cut(s)	1940
MvaI	CCWGG	5 cut(s)	167, 800, 954, 1244, 2033
MvnI	CGCG	2 cut(s)	783, 2358
MwoI	GCNNNNNNNGC	6 cut(s)	1106, 1436, 1966, 2159, 2165, 2192
NaeI	GCCGGC	1 cut(s)	1066
NcoI	CCATGG	2 cut(s)	1274, 1307
NdeI	CATATG	1 cut(s)	1012
NgoMIV	GCCGGC	1 cut(s)	1064
NheI	GCTAGC	1 cut(s)	808
NlaIV	GGNNCC	5 cut(s)	268, 1280, 1355, 1744, 2394
NmeAIII	GCCGAG	1 cut(s)	2015
NmuCI	GTSAC	3 cut(s)	610, 620, 956
NspI	RCATGY	2 cut(s)	92, 1303
PagI	TCATGA	2 cut(s)	1293, 1813
PaqCI	CACCTGC	1 cut(s)	1243
PceI	AGGCCT	1 cut(s)	82
PcsI	WCGNNNNNNNCGW	2 cut(s)	29, 42
PdiI	GCCGGC	1 cut(s)	1066
PdmI	GAANNNNTTC	2 cut(s)	161, 1317
PfeI	GAWTC	7 cut(s)	391, 668, 674, 1166, 1619, 1796, 2198
PflMI	CCANNNNNTGG	1 cut(s)	2402
PfoI	TCCNGGA	1 cut(s)	165
PinAI	ACCGGT	1 cut(s)	2414
PkrI	GCNGC	4 cut(s)	2122, 2155, 2158, 2161
PleI	GAGTC	5 cut(s)	190, 554, 1113, 1334, 1744
PpsI	GAGTC	5 cut(s)	190, 554, 1113, 1334, 1744
PpuMI	RGGWCCY	1 cut(s)	1743
Psp5II	RGGWCCY	1 cut(s)	1743
Psp6I	CCWGG	5 cut(s)	165, 798, 952, 1242, 2031
PspEI	GGTNACC	2 cut(s)	956, 1511
PspGI	CCWGG	5 cut(s)	165, 798, 952, 1242, 2031
PspN4I	GGNNCC	5 cut(s)	268, 1280, 1355, 1744, 2394
PspPI	GGNCC	3 cut(s)	1271, 1403, 1743
PspPPI	RGGWCCY	1 cut(s)	1743
PsrI	GAACNNNNNNTAC	2 cut(s)	1785, 1817
PstI	CTGCAG	1 cut(s)	2440
PstNI	CAGNNNCTG	5 cut(s)	323, 500, 805, 893, 1739
PsuI	RGATCY	9 cut(s)	533, 802, 889, 934, 1592, 1660, 1807, 1868, 2290
PvuII	CAGCTG	1 cut(s)	1568
RsaI	GTAC	5 cut(s)	93, 903, 1040, 2130, 2277
RsaNI	GTAC	5 cut(s)	92, 902, 1039, 2129, 2276
RseI	CAYNNNNRTG	2 cut(s)	1292, 1298
SalI	GTCGAC	1 cut(s)	2334
SaqAI	TTAA	5 cut(s)	302, 1653, 2039, 2241, 2469
SatI	GCNGC	4 cut(s)	2121, 2154, 2157, 2160
Sau96I	GGNCC	3 cut(s)	1271, 1403, 1743
ScaI	AGTACT	1 cut(s)	2130
SchI	GAGTC	5 cut(s)	191, 554, 1113, 1335, 1745
ScrFI	CCNGG	5 cut(s)	167, 800, 954, 1244, 2033
SduI	GDGCHC	4 cut(s)	51, 310, 1996, 2432
SfaNI	GCATC	9 cut(s)	49, 557, 905, 1353, 1417, 1426, 1643, 2065, 2089
SfcI	CTRYAG	1 cut(s)	2436
SinI	GGWCC	2 cut(s)	1271, 1743
SmiMI	CAYNNNNRTG	2 cut(s)	1292, 1298
SmlI	CTYRAG	1 cut(s)	2124
SmoI	CTYRAG	1 cut(s)	2124
SseBI	AGGCCT	1 cut(s)	82
SsiI	CCGC	5 cut(s)	9, 1008, 2080, 2168, 2474
SspMI	CTAG	9 cut(s)	263, 531, 809, 1235, 1412, 1533, 1631, 2313, 2330
StuI	AGGCCT	1 cut(s)	82
StyD4I	CCNGG	5 cut(s)	165, 798, 952, 1242, 2031
StyI	CCWWGG	7 cut(s)	686, 1274, 1307, 1422, 1596, 1950, 2347
TaaI	ACNGT	7 cut(s)	626, 664, 866, 1033, 1043, 1358, 2387
TaiI	ACGT	2 cut(s)	585, 1338
TaqI	TCGA	4 cut(s)	617, 943, 1324, 2335
TatI	WGTACW	3 cut(s)	91, 2128, 2275
TfiI	GAWTC	7 cut(s)	391, 668, 674, 1166, 1619, 1796, 2198
Tru1I	TTAA	5 cut(s)	302, 1653, 2039, 2241, 2469
Tru9I	TTAA	5 cut(s)	302, 1653, 2039, 2241, 2469
TscAI	CASTG	3 cut(s)	1036, 2392, 2440
TseFI	GTSAC	3 cut(s)	610, 620, 956
TseI	GCWGC	4 cut(s)	2120, 2153, 2156, 2159
Tsp45I	GTSAC	3 cut(s)	610, 620, 956
TspDTI	ATGAA	9 cut(s)	17, 413, 1067, 1282, 1310, 1542, 1773, 1802, 2160
TspRI	CASTG	3 cut(s)	1036, 2392, 2440
Van91I	CCANNNNNTGG	1 cut(s)	2402
VpaK11BI	GGWCC	2 cut(s)	1271, 1743
XapI	RAATTY	3 cut(s)	1054, 1761, 2304
XbaI	TCTAGA	1 cut(s)	1234
XceI	RCATGY	2 cut(s)	92, 1303
XmiI	GTMKAC	3 cut(s)	185, 2335, 2411
XmnI	GAANNNNTTC	2 cut(s)	161, 1317
XspI	CTAG	9 cut(s)	263, 531, 809, 1235, 1412, 1533, 1631, 2313, 2330
ZrmI	AGTACT	1 cut(s)	2130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.