Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0009519

Physical Location & Seq

Genomic Coordinates Reverse (-)

57837917 .. 57845228

Gene Structure 7312 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG304200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGAAATCCTCCTCCGCCGCCGCCGCCGCCAAGGCCACGCTTAATCCGCTCAGTGTCGCCTACGAGAACAAGAGGGATGCTTATGGATTTGCTGTGAGACCTCAGCATGTGCAACGCTACCGAGAATATGCCAATATCTACAAGGAAGAAGAGGAAGAAAGATCAGAAAGGTGGACCTCTTTTTTGCAACGGCAAGCAGAGTCTGCAAGATTGCCCGTAAATGGATCATCTAATGCAGAAGATAACAAGGCCTTGCAAGCTGAGACCTCAGAGCAAGAACTAGATTCCAGTTCAGAGAAGGGTGTTGATGGCGATGTTTTAGGTGACCAGAAGCCGGGTTCGAATTCTCCAATAAAAAATGATAGCGAAATGGAGGAACTGGCAGCGAAGGAGACAAAAGCTCATGGGATCCAAATATGGAATGAGATTAGATCATCCCTTCACGAAATTGAAGAAATGATGAGTATTCGTGTAAAGAAGAAGAGCAATTTATCAAAGACAGAGCAGGACACGAGAAATGGAAAGCCGGTTCATCCTATTGAAGAGTTTAGACCCCCAAAAGGAGCATCTGAGGAGGACTCTGAGGACGAGTTCTACGACATGGAGAGGTCGGACCAAGATGCCCCTTCAAGTGACAGTATAAATGCCTCTGCAACAGGTGCTGCTTCTGACGTAGTCCCTTCAGAATCCTTATTTCCTTGGAAACAAGAGTTGGAGGTTCTTGTTCGTGGGGGAGTACCCATGGCTCTGAGGGGAGAGCTTTGGCAAGCATTTGTGGGTGTGAAGGTGCGGCATGTTGATAATTATTACCAGGATCTGCTAGCTTCTGAAACTAAAGCTGGCAGTGATGTGGAACAACATAGCTTGGACTCAGACATAAATAGCAAGTTGTCAACAACTGATTCTGCATATGTACCTGAAAAGTGGAAAGGACAGATTGAGAAGGATCTACCTCGTACATTTCCAGGTCACCCTGCTCTAGATGTGGATGGTAGAAATGCTTTGAGGCGGTTGCTTACTGCATATGCGCGACACAATCCTTCTGTTGGGTACTGTCAGGCCATGAATTTCTTTGCTGGCTTGCTACTACTTCTCATGCCCGAAGAAAATGCTTTTTGGGCTTTGATGGGAATCCTAGATGATTATTTTGAGGGCTATTACTCTGAGGAAATGATAGAATCTCAGGTGGATCAACTTGTTTTCGAGGAGTTGGTGCATGAGAGATTTCCTAAATTAGTCAATCATCTAGATTACCTGGGAGTGCAAGTGGCATGGGTGACTGGACCATGGTTCCTTTCCATTTTCATGAATATGCTGCCATGGGAAAGTGTTCTACGAGTCTGGGATGTGCTTCTTTTTGAGGGGAACCGCGTGATGCTATTTAGGACCGCACTTGCTTTGATGGAGTTATATGGCCCTGCACTGGTTACTACCAAGGATGCTGGAGACGCAGTCACTCTGCTGCAATCGCTGGCTGGCTCCACATTTGATAGCAGTCAACTAGTATTGACAGCTTGCATGGGTTACCAAAATGTAAATGAAACTAGATTACAAGAGTTGAGAAATAAACATCGGCCTGCTGTAATTAATGCTATTGAGGAAAGATCAAAGGGACTTCGGGCTTGGAAGGATTCTCAGGGTCTAGCTTCTAAGCTATACAATTTTAAGCAAGATCCTAAATCAATGATAATAGAAACGAAGAAAGCAGAAAGAAATGGTGATTTATCACGTTCAGAGTTCGGGTCCACTAATGCAGATGAAATTCTTATTAGCTTGACTGGAGATGGGGAGTTGGATTCTGTTCCAGATCTTCAAGAGCAGGTTGAGCAATTAGAGCAAGAGGTCGCCGATCTTCGCCGAGCCCTTTCTGATAAGCAGGAACAGGAGAGTGTCATGCTCCAGGTGTTGATGCGAGTAGAGCAAGAGCAGAGATTAACTGAAGATGCGCGGAGATTTTCTGAGCAAGATGCAGCAGCACAGAGATATGCTGCTCAAGTGCTTCAGGAAAAGTATGAAGAGGCCACTGCTTCCCTCGCGGAAATGGAGAAGAGAGTTGTTATGGCAGAATCAATGTTAGAGGCTACTTTACAGTACCAAACTGGTCAACAGAAAACACAACCTTCTCCACGATCTATATCTTTAGATTCTTCACTCAGAAGCAATCAAGAGCCCACACAAGAGTTCCCTGCAAGAAAGATTAGTTTGCTATCTCGACCATTTGGACTTGGTTGGCGCAATCGCAGTGAGGGAAGAACTGCTTCCAGTGAGGGACAGAGTCCTACCACAGAAAGGAAAGAAACAAATGCAGAACTTAAAGAGGCGAATGACGGCAAGCCTATCAGTGAAGGACAAAGTCCTACCGCAGAATGCAAAGAGACGAATGCAGAACTTAAAGAGACAAATGGCATTGAAGTACAAGATAAAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

809

Amino Acids

90.92

Weight (kDa)

4.82

Isoelectric Point (pI)

63.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	249 - 473	7e-52	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	334 - 491	1.3e-25	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009519)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55020 AT3G55020 AT3G55020
fragaria_vesca	FvH4_7g20590 FvH4_7g20590
malus_domestica	MD01G1114800.v1.1 MD07G1182800.v1.1
prunus_persica	Prupe.2G221500_v2.0.a1 Prupe.2G221500_v2.0.a1
pyrus_communis	pycom01g14370 pycom07g17540
rosa_chinensis	RchiOBHm_Chr1g0364631
rosa_laevigata	RLG00000027471
rosa_multiflora	Rmu_ssc0000282.1_g000019
rosa_roxburghii	Rroxscaffold_4G00291790 Rroxscaffold_4G00292210
rosa_rugosa	Rorug01G0317200
rosa_samantha	Rh1AG326200 Rh1BG287400 Rh1CG304200 Rh1DG319100
rosa_wichuraiana	Rw1G028900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1810
AccBSI	CCGCTC	1 cut(s)	49
AccII	CGCG	4 cut(s)	1030, 1371, 1948, 2036
AclWI	GGATC	7 cut(s)	232, 403, 416, 822, 954, 1197, 1667
AcsI	RAATTY	3 cut(s)	343, 1066, 1761
AcuI	CTGAAG	3 cut(s)	666, 1959, 1985
AfaI	GTAC	6 cut(s)	738, 915, 958, 1052, 2093, 2415
AfiI	CCNNNNNNNGG	6 cut(s)	221, 334, 560, 1046, 1423, 2289
AgsI	TTSAA	5 cut(s)	452, 542, 630, 1814, 2411
AhlI	ACTAGT	1 cut(s)	1501
AjnI	CCWGG	4 cut(s)	810, 964, 1254, 1899
AjuI	GAANNNNNNNTTGG	2 cut(s)	695, 727
AloI	GAACNNNNNNTCC	2 cut(s)	513, 545
Alw26I	GTCTC	6 cut(s)	91, 257, 386, 1440, 2369, 2390
AlwI	GGATC	7 cut(s)	232, 403, 416, 822, 954, 1197, 1667
AlwNI	CAGNNNCTG	3 cut(s)	203, 662, 817
AoxI	GGCC	6 cut(s)	33, 249, 1059, 1414, 1574, 2019
ApeKI	GCWGC	7 cut(s)	383, 662, 1315, 1462, 1970, 1973, 1988
ApoI	RAATTY	3 cut(s)	343, 1066, 1761
ArsI	GACNNNNNNTTYG	2 cut(s)	166, 198
AseI	ATTAAT	1 cut(s)	1587
Asp700I	GAANNNNTTC	2 cut(s)	1329, 2257
AspLEI	GCGC	3 cut(s)	1030, 1948, 2235
AspS9I	GGNCC	6 cut(s)	174, 613, 1283, 1386, 1415, 1743
AsuC2I	CCSGG	1 cut(s)	336
AsuHPI	GGTGA	4 cut(s)	335, 962, 1288, 1730
AsuII	TTCGAA	1 cut(s)	341
AsuNHI	GCTAGC	1 cut(s)	820
AvaII	GGWCC	5 cut(s)	174, 613, 1283, 1386, 1743
BamHI	GGATCC	1 cut(s)	408
BanII	GRGCYC	2 cut(s)	1864, 2172
BauI	CACGAG	1 cut(s)	511
BbvCI	CCTCAGC	1 cut(s)	102
BbvI	GCAGC	7 cut(s)	395, 649, 1302, 1449, 1975, 1982, 1985
BccI	CCATC	5 cut(s)	302, 983, 1120, 1396, 1778
BceAI	ACGGC	2 cut(s)	206, 2344
BcgI	CGANNNNNNTGC	2 cut(s)	1091, 1125
BciT130I	CCWGG	4 cut(s)	812, 966, 1256, 1901
BcnI	CCSGG	1 cut(s)	336
BcoDI	GTCTC	6 cut(s)	91, 257, 386, 1440, 2369, 2390
BcuI	ACTAGT	1 cut(s)	1501
BfaI	CTAG	8 cut(s)	281, 821, 980, 1136, 1247, 1502, 1545, 1643
BfuAI	ACCTGC	1 cut(s)	1810
BglI	GCCNNNNNGGC	1 cut(s)	32
BglII	AGATCT	1 cut(s)	1807
Bme1390I	CCNGG	5 cut(s)	336, 812, 966, 1256, 1901
Bme18I	GGWCC	5 cut(s)	174, 613, 1283, 1386, 1743
BmgT120I	GGNCC	6 cut(s)	174, 613, 1283, 1386, 1415, 1743
BmiI	GGNNCC	5 cut(s)	410, 1292, 1367, 1480, 1744
BmrFI	CCNGG	5 cut(s)	336, 812, 966, 1256, 1901
BmsI	GCATC	8 cut(s)	67, 575, 610, 1365, 1429, 1899, 1933, 1957
BmtI	GCTAGC	1 cut(s)	824
BplI	GAGNNNNNCTC	2 cut(s)	563, 595
BpmI	CTGGAG	3 cut(s)	1464, 1800, 1883
Bpu10I	CCTNAGC	1 cut(s)	102
Bpu14I	TTCGAA	1 cut(s)	341
BpuEI	CTTGAG	1 cut(s)	1977
BpuMI	CCSGG	1 cut(s)	336
BsaBI	GATNNNNATC	2 cut(s)	1130, 2134
BsaI	GGTCTC	2 cut(s)	91, 257
BsaJI	CCNNGG	7 cut(s)	30, 698, 741, 1255, 1286, 1319, 1434
BsaXI	ACNNNNNCTCC	4 cut(s)	1251, 1281, 1437, 1467
Bsc4I	CCNNNNNNNGG	6 cut(s)	221, 334, 560, 1046, 1423, 2289
Bse118I	RCCGGY	1 cut(s)	526
Bse1I	ACTGG	7 cut(s)	288, 384, 1285, 1428, 1783, 2104, 2262
Bse8I	GATNNNNATC	2 cut(s)	1130, 2134
BseBI	CCWGG	4 cut(s)	812, 966, 1256, 1901
BseDI	CCNNGG	7 cut(s)	30, 698, 741, 1255, 1286, 1319, 1434
BseGI	GGATG	6 cut(s)	82, 434, 532, 994, 1351, 1444
BseJI	GATNNNNATC	2 cut(s)	1130, 2134
BseLI	CCNNNNNNNGG	6 cut(s)	221, 334, 560, 1046, 1423, 2289
BseNI	ACTGG	7 cut(s)	288, 384, 1285, 1428, 1783, 2104, 2262
BseRI	GAGGAG	2 cut(s)	587, 1220
BseXI	GCAGC	7 cut(s)	395, 649, 1302, 1449, 1975, 1982, 1985
BsgI	GTGCAG	1 cut(s)	1404
Bsh1236I	CGCG	4 cut(s)	1030, 1371, 1948, 2036
BshFI	GGCC	6 cut(s)	35, 251, 1061, 1416, 1576, 2021
BsiSI	CCGG	2 cut(s)	335, 527
BslFI	GGGAC	3 cut(s)	662, 1626, 2283
BslI	CCNNNNNNNGG	6 cut(s)	221, 334, 560, 1046, 1423, 2289
BsmAI	GTCTC	6 cut(s)	91, 257, 386, 1440, 2369, 2390
BsmBI	CGTCTC	2 cut(s)	1440, 2369
BsmFI	GGGAC	3 cut(s)	662, 1626, 2283
BsmI	GAATGC	2 cut(s)	2372, 2386
BsnI	GGCC	6 cut(s)	35, 251, 1061, 1416, 1576, 2021
Bso31I	GGTCTC	2 cut(s)	91, 257
Bsp119I	TTCGAA	1 cut(s)	341
Bsp1286I	GDGCHC	2 cut(s)	1864, 2172
Bsp19I	CCATGG	3 cut(s)	741, 1286, 1319
BspANI	GGCC	6 cut(s)	35, 251, 1061, 1416, 1576, 2021
BspFNI	CGCG	4 cut(s)	1030, 1371, 1948, 2036
BspHI	TCATGA	1 cut(s)	1305
BspLI	GGNNCC	5 cut(s)	410, 1292, 1367, 1480, 1744
BspMI	ACCTGC	1 cut(s)	1810
BspOI	GCTAGC	1 cut(s)	824
BspPI	GGATC	7 cut(s)	232, 403, 416, 822, 954, 1197, 1667
BspQI	GCTCTTC	1 cut(s)	476
BspT104I	TTCGAA	1 cut(s)	341
BspTNI	GGTCTC	2 cut(s)	91, 257
BsrBI	CCGCTC	1 cut(s)	49
BsrFI	RCCGGY	1 cut(s)	526
BsrI	ACTGG	7 cut(s)	288, 384, 1285, 1428, 1783, 2104, 2262
BssAI	RCCGGY	1 cut(s)	526
BssECI	CCNNGG	7 cut(s)	30, 698, 741, 1255, 1286, 1319, 1434
BssSI	CACGAG	1 cut(s)	511
BssT1I	CCWWGG	6 cut(s)	30, 698, 741, 1286, 1319, 1434
Bst2BI	CACGAG	1 cut(s)	511
Bst2UI	CCWGG	4 cut(s)	812, 966, 1256, 1901
Bst4CI	ACNGT	3 cut(s)	638, 1055, 2091
Bst6I	CTCTTC	5 cut(s)	144, 476, 537, 2010, 2042
BstAPI	GCANNNNNTGC	2 cut(s)	203, 659
BstBI	TTCGAA	1 cut(s)	341
BstDSI	CCRYGG	3 cut(s)	741, 1286, 1319
BstEII	GGTNACC	3 cut(s)	323, 968, 1523
BstF5I	GGATG	6 cut(s)	82, 434, 532, 994, 1351, 1444
BstFNI	CGCG	4 cut(s)	1030, 1371, 1948, 2036
BstHHI	GCGC	3 cut(s)	1030, 1948, 2235
BstMAI	GTCTC	6 cut(s)	91, 257, 386, 1440, 2369, 2390
BstNI	CCWGG	4 cut(s)	812, 966, 1256, 1901
BstNSI	RCATGY	2 cut(s)	110, 797
BstPI	GGTNACC	3 cut(s)	323, 968, 1523
BstSCI	CCNGG	5 cut(s)	334, 810, 964, 1254, 1899
BstUI	CGCG	4 cut(s)	1030, 1371, 1948, 2036
BstV1I	GCAGC	7 cut(s)	395, 649, 1302, 1449, 1975, 1982, 1985
BstX2I	RGATCY	5 cut(s)	408, 814, 946, 1672, 1807
BstYI	RGATCY	5 cut(s)	408, 814, 946, 1672, 1807
BsuRI	GGCC	6 cut(s)	35, 251, 1061, 1416, 1576, 2021
BtgI	CCRYGG	3 cut(s)	741, 1286, 1319
BtgZI	GCGATG	1 cut(s)	327
BtsCI	GGATG	6 cut(s)	82, 434, 532, 994, 1351, 1444
BtsI	GCAGTG	3 cut(s)	850, 2022, 2248
BtsIMutI	CAGTG	7 cut(s)	58, 850, 1421, 2022, 2248, 2269, 2347
BveI	ACCTGC	1 cut(s)	1810
CaiI	CAGNNNCTG	3 cut(s)	203, 662, 817
CciI	TCATGA	1 cut(s)	1305
CfoI	GCGC	3 cut(s)	1030, 1948, 2235
Cfr10I	RCCGGY	1 cut(s)	526
Cfr13I	GGNCC	6 cut(s)	174, 613, 1283, 1386, 1415, 1743
CseI	GACGC	1 cut(s)	1457
Csp6I	GTAC	6 cut(s)	737, 914, 957, 1051, 2092, 2414
CviQI	GTAC	6 cut(s)	737, 914, 957, 1051, 2092, 2414
Eam1104I	CTCTTC	5 cut(s)	144, 476, 537, 2010, 2042
EarI	CTCTTC	5 cut(s)	144, 476, 537, 2010, 2042
EciI	GGCGGA	1 cut(s)	4
Eco130I	CCWWGG	6 cut(s)	30, 698, 741, 1286, 1319, 1434
Eco147I	AGGCCT	1 cut(s)	251
Eco24I	GRGCYC	2 cut(s)	1864, 2172
Eco31I	GGTCTC	2 cut(s)	91, 257
Eco47I	GGWCC	5 cut(s)	174, 613, 1283, 1386, 1743
Eco57I	CTGAAG	3 cut(s)	666, 1959, 1985
Eco91I	GGTNACC	3 cut(s)	323, 968, 1523
EcoO65I	GGTNACC	3 cut(s)	323, 968, 1523
EcoRI	GAATTC	1 cut(s)	343
EcoRII	CCWGG	4 cut(s)	810, 964, 1254, 1899
EcoT14I	CCWWGG	6 cut(s)	30, 698, 741, 1286, 1319, 1434
EcoT38I	GRGCYC	2 cut(s)	1864, 2172
ErhI	CCWWGG	6 cut(s)	30, 698, 741, 1286, 1319, 1434
Esp3I	CGTCTC	2 cut(s)	1440, 2369
FalI	AAGNNNNNCTT	2 cut(s)	2242, 2274
FaqI	GGGAC	3 cut(s)	662, 1626, 2283
FauNDI	CATATG	2 cut(s)	910, 1024
FokI	GGATG	6 cut(s)	89, 421, 519, 1001, 1358, 1451
FriOI	GRGCYC	2 cut(s)	1864, 2172
FspBI	CTAG	8 cut(s)	281, 821, 980, 1136, 1247, 1502, 1545, 1643
GlaI	GCGC	3 cut(s)	1029, 1947, 2234
GsuI	CTGGAG	3 cut(s)	1464, 1800, 1883
HaeIII	GGCC	6 cut(s)	35, 251, 1061, 1416, 1576, 2021
HapII	CCGG	2 cut(s)	335, 527
HgaI	GACGC	1 cut(s)	1457
HhaI	GCGC	3 cut(s)	1030, 1948, 2235
Hin6I	GCGC	3 cut(s)	1028, 1946, 2233
HinP1I	GCGC	3 cut(s)	1028, 1946, 2233
HincII	GTYRAC	3 cut(s)	894, 1499, 2105
HindII	GTYRAC	3 cut(s)	894, 1499, 2105
HpaII	CCGG	2 cut(s)	335, 527
HphI	GGTGA	4 cut(s)	335, 962, 1288, 1730
Hpy166II	GTNNAC	5 cut(s)	174, 894, 1499, 1746, 2105
Hpy188III	TCNNGA	9 cut(s)	443, 980, 1247, 1306, 1805, 1814, 2003, 2165, 2211
Hpy8I	GTNNAC	5 cut(s)	174, 894, 1499, 1746, 2105
HpyCH4III	ACNGT	3 cut(s)	638, 1055, 2091
HpyCH4IV	ACGT	2 cut(s)	672, 1729
HpySE526I	ACGT	2 cut(s)	672, 1729
HspAI	GCGC	3 cut(s)	1028, 1946, 2233
LguI	GCTCTTC	1 cut(s)	476
LmnI	GCTCC	3 cut(s)	563, 1484, 1902
Lsp1109I	GCAGC	7 cut(s)	395, 649, 1302, 1449, 1975, 1982, 1985
LweI	GCATC	8 cut(s)	67, 575, 610, 1365, 1429, 1899, 1933, 1957
MaeI	CTAG	8 cut(s)	281, 821, 980, 1136, 1247, 1502, 1545, 1643
MaeII	ACGT	2 cut(s)	672, 1729
MaeIII	GTNAC	7 cut(s)	323, 632, 968, 1276, 1426, 1453, 1523
MbiI	CCGCTC	1 cut(s)	49
MflI	RGATCY	5 cut(s)	408, 814, 946, 1672, 1807
MhlI	GDGCHC	2 cut(s)	1864, 2172
MlyI	GAGTC	5 cut(s)	209, 572, 863, 1347, 2284
MmeI	TCCRAC	3 cut(s)	591, 693, 1773
MroXI	GAANNNNTTC	2 cut(s)	1329, 2257
MseI	TTAA	6 cut(s)	42, 1587, 1665, 1934, 2313, 2391
MslI	CAYNNNNRTG	2 cut(s)	1304, 1310
MspI	CCGG	2 cut(s)	335, 527
MspR9I	CCNGG	5 cut(s)	336, 812, 966, 1256, 1901
Mva1269I	GAATGC	2 cut(s)	2372, 2386
MvaI	CCWGG	4 cut(s)	812, 966, 1256, 1901
MvnI	CGCG	4 cut(s)	1030, 1371, 1948, 2036
NciI	CCSGG	1 cut(s)	336
NcoI	CCATGG	3 cut(s)	741, 1286, 1319
NdeI	CATATG	2 cut(s)	910, 1024
NheI	GCTAGC	1 cut(s)	820
NlaIV	GGNNCC	5 cut(s)	410, 1292, 1367, 1480, 1744
NmeAIII	GCCGAG	1 cut(s)	1883
NmuCI	GTSAC	5 cut(s)	323, 632, 968, 1276, 1453
NspI	RCATGY	2 cut(s)	110, 797
NspV	TTCGAA	1 cut(s)	341
PagI	TCATGA	1 cut(s)	1305
PceI	AGGCCT	1 cut(s)	251
PciSI	GCTCTTC	1 cut(s)	476
PcsI	WCGNNNNNNNCGW	1 cut(s)	594
PctI	GAATGC	2 cut(s)	2372, 2386
PdmI	GAANNNNTTC	2 cut(s)	1329, 2257
PfeI	GAWTC	9 cut(s)	284, 686, 902, 1131, 1178, 1631, 1796, 2066, 2144
PflFI	GACNNNGTC	4 cut(s)	674, 1451, 2274, 2352
PleI	GAGTC	5 cut(s)	208, 572, 863, 1346, 2283
PpsI	GAGTC	5 cut(s)	208, 572, 863, 1346, 2283
PshBI	ATTAAT	1 cut(s)	1587
Psp6I	CCWGG	4 cut(s)	810, 964, 1254, 1899
PspEI	GGTNACC	3 cut(s)	323, 968, 1523
PspGI	CCWGG	4 cut(s)	810, 964, 1254, 1899
PspN4I	GGNNCC	5 cut(s)	410, 1292, 1367, 1480, 1744
PspPI	GGNCC	6 cut(s)	174, 613, 1283, 1386, 1415, 1743
PstNI	CAGNNNCTG	3 cut(s)	203, 662, 817
PsuI	RGATCY	5 cut(s)	408, 814, 946, 1672, 1807
PsyI	GACNNNGTC	4 cut(s)	674, 1451, 2274, 2352
RsaI	GTAC	6 cut(s)	738, 915, 958, 1052, 2093, 2415
RsaNI	GTAC	6 cut(s)	737, 914, 957, 1051, 2092, 2414
RseI	CAYNNNNRTG	2 cut(s)	1304, 1310
SapI	GCTCTTC	1 cut(s)	476
SaqAI	TTAA	6 cut(s)	42, 1587, 1665, 1934, 2313, 2391
Sau96I	GGNCC	6 cut(s)	174, 613, 1283, 1386, 1415, 1743
SchI	GAGTC	5 cut(s)	209, 572, 863, 1347, 2284
ScrFI	CCNGG	5 cut(s)	336, 812, 966, 1256, 1901
SduI	GDGCHC	2 cut(s)	1864, 2172
SfaNI	GCATC	8 cut(s)	67, 575, 610, 1365, 1429, 1899, 1933, 1957
SfuI	TTCGAA	1 cut(s)	341
SinI	GGWCC	5 cut(s)	174, 613, 1283, 1386, 1743
SmiMI	CAYNNNNRTG	2 cut(s)	1304, 1310
SmlI	CTYRAG	1 cut(s)	1992
SmoI	CTYRAG	1 cut(s)	1992
SpeI	ACTAGT	1 cut(s)	1501
SseBI	AGGCCT	1 cut(s)	251
SspMI	CTAG	8 cut(s)	281, 821, 980, 1136, 1247, 1502, 1545, 1643
StuI	AGGCCT	1 cut(s)	251
StyD4I	CCNGG	5 cut(s)	334, 810, 964, 1254, 1899
StyI	CCWWGG	6 cut(s)	30, 698, 741, 1286, 1319, 1434
TaaI	ACNGT	3 cut(s)	638, 1055, 2091
TaiI	ACGT	2 cut(s)	675, 1732
TaqI	TCGA	3 cut(s)	341, 1203, 2212
TatI	WGTACW	1 cut(s)	2413
TauI	GCSGC	5 cut(s)	20, 23, 26, 29, 793
TfiI	GAWTC	9 cut(s)	284, 686, 902, 1131, 1178, 1631, 1796, 2066, 2144
Tru1I	TTAA	6 cut(s)	42, 1587, 1665, 1934, 2313, 2391
Tru9I	TTAA	6 cut(s)	42, 1587, 1665, 1934, 2313, 2391
TscAI	CASTG	7 cut(s)	58, 850, 1428, 2029, 2248, 2269, 2347
TseFI	GTSAC	5 cut(s)	323, 632, 968, 1276, 1453
TseI	GCWGC	7 cut(s)	383, 662, 1315, 1462, 1970, 1973, 1988
Tsp45I	GTSAC	5 cut(s)	323, 632, 968, 1276, 1453
TspDTI	ATGAA	8 cut(s)	17, 521, 1079, 1294, 1322, 1554, 1773, 2028
TspRI	CASTG	7 cut(s)	58, 850, 1428, 2029, 2248, 2269, 2347
Tth111I	GACNNNGTC	4 cut(s)	674, 1451, 2274, 2352
VpaK11BI	GGWCC	5 cut(s)	174, 613, 1283, 1386, 1743
VspI	ATTAAT	1 cut(s)	1587
XapI	RAATTY	3 cut(s)	343, 1066, 1761
XbaI	TCTAGA	2 cut(s)	979, 1246
XceI	RCATGY	2 cut(s)	110, 797
XmnI	GAANNNNTTC	2 cut(s)	1329, 2257
XspI	CTAG	8 cut(s)	281, 821, 980, 1136, 1247, 1502, 1545, 1643

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.