Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0009519

Physical Location & Seq

Genomic Coordinates Forward (+)

12150182 .. 12157487

Gene Structure 7306 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00291790.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGAAATCCTCCTCCGCCGCCGCCGCCGCCGCCAAGGCCACGCTTAATCCGCTCAGTGTCGCCTACGAGAACAAGAGTGATTTGGCTGAAGCTGAGTTAGTGTTTGAGATCGGAGCTGTTCGTTTGTGTGTAGTTTTGGTAGGATTTGTGTTTTCGTTTGCTTTTGAATGTGCATTGAGGCAATGCCGAGCTCTATGGGAAGTAGAATATGCCAATTGCAGGGATGCTTATGGATTTGCTGTGAGACCTCAGCATGTGCACCGCTACCGAGAATATGCCAATATCTACAAGGTTTTACTCTATCTTAATTTCCACTTTCCAGTTGACGTTTCGGGTTTGTATGAGAAATGTGAAGAAGAGGAAGAAAGATCAGAAAGGTGGACCTCTTTTTTGCAACGGCAAGCAGAGTCTGCAAGGTTGCCCGTAAATGGATCATCTAATGCAGAAGATAACAAGGCCTTGCAAGCTGAGACCTCAGAGCAAGAACTAGATTCCAGTTCAGAGAAGGGTGTTGATGGCGATGTTTTAGGTGACCAGAAGCCGGGTTCGAATTCTCCAATAAAAAATGATAGCGAAATGGAGGAACTGGCAGCGAAGGAGACAAAAGCTCATGGGATCCAAATATGGAATGAGATTAGATCATCCCTTCACGAAATTGAAGAAATGATGAGTATTCGTGTAAAGAAGAAGAGCAATTTATCAAAGACAGAGCAGGACACGAGAAATGGAAAGCCGGTTCATCCTATTGAAGAGTTTAGACCCCCAAAAGGAGCATCTGAGGAGGACTCTGAGGACGAGTTCTACGACATGGAGAGGTCAGACCAAGATGCCCCTTCAAGTGACAGTATAAATGCCTCTGCAACAGGTGCTGCTTCTGACGTAGTCCCTTCAGAATCCTTATTTCCTTGGAAACAAGAGTTGGAGCTTTGGCAAGCATTTGTGGGTGTGAAGGTGCGGCGTGTTGATAATTATTACCAGGATCTGCTAGCTTCTGAAACTAAAGCTGGCAGACCTACCTCTCGTACATTTCCAGGTCACCCTGCTCTAGATGTGGATGGTAGAAATGCTTTGAGGCGATTGCTTACTGCATATGCGCGACACAATCCTTCTGTTGGGTACTGTCAGGCCATGAATTTCTTTGCTGGCTTGCTACTACTTCTCATGCCTGAAGAAAATGCTTTTTGGGCTTTGATGGGAATCCTAGATGATTATTTTGAGGGCTATTACTCTGAGGAAATGATAGAATCTCAGGTGGATCAACTTGTTTTCGAGGAGTTGGTGCATGAGAGATTTCCTAAATTAGGTTTTCAATCATCTAGATTACCTGGGAGTGCAAGTGGCATGGGTGACTGGACCATGGTTCCTTTCCATTTTCATGAATATGCTGCCATGGGAAAGTGGTCAGTTCTACGAGTCTGGGATGTGCTTCTTTTTGAGGGGAACCGCGTGATGCTATTTAGGACCGCACTTGCTTTGATGGAGTTATATGGCCCTGCACTGGTTACTACCAAGGATGCTGGAGATGCAGTCACTCTGCTGCAATCGCTGGCTGGCTCCACATTTGATAGCAGTCAACTAGTATTGACAGCTTGCATGGGTTACCAAAATGTAAATGAAACTAGATTACAAGAGTTGAGAAATAAACATCGGCCTGCTGTAATTAATGCTATTGAGGAAAGATCAAAGGGACTTCGGGCTTGGAAGGATTCTCAGGGTCTAGCTTCTAAGCTATACAATTTTAAGCAAGATCCTAAATCAATGATAATAGAAACGAAGAAAGCAGAAAGAAATGGTGATTTATCACGTTCAGAGTCTGGGTCCACTAATGCAGATGAAATTCTTATTAGCTTGACTGAGGATGGGGAGTTGGATTCTGTTCCAGATCTTCAAGAGCAGGTTGAGCAATTAGAGCAAGAGGTCGCCGATCTTCGCCGAGCCCTTTCTGATAAGCAGGAACAGGAGAGTGTCATGCTCCAGGTGTTGATGCGAGTAGAGCAAGAGCAGAGATTAACTGAAGATGCGCGGAGATTTTCTGAGCAAGATGCAGCAGCACAGAGATATGCTGCTCAAGTGCTTCAGGAAAAGTATGAAGAGGCCACTGCTTCCCTCGCAGAAATGGAGAAGAGAGTTGTTATGGCAGAATCAATGTTAGAGGCTACTTTACAGTACCAAACTGGTCAACAGAAAACACAACCTTCTCCACGATCTTTATCTTTAGATTCTTCACCCAGAAGCAATCAAGAGCCCACACAAGAGTTCCCTGCAAGAAAGATTAGTTTGCTATCTCGACCATTTGGACTTGGTTGGTGCAATCGCAGTGAGCTGCCTACTTTGGTAGGAGTTGAACTTATGGGAGAGAAGTACCACTTGGCTATGAGGCCCGGAACAATATTTATTCTTTGGGAAAAACTGCTTCCAGTGAGGGACAGTGTCCTACCACAGAAAGGAAAGAAACAAATGCAGAACTTAAAGAGGCGAATGACGGCAAGCATATCAGTGAAGGACAAAGTCCTACCGCAGAATGCAAAGAGACAAATGGCATTGAAGTACAAGATAAAGTGTAGAACGGTGCAAGTTGTGTTGATATCCCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

864

Amino Acids

97.57

Weight (kDa)

5.23

Isoelectric Point (pI)

62.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	340 - 498	5.1e-29	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	356 - 516	6.9e-15	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009519)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55020 AT3G55020 AT3G55020
fragaria_vesca	FvH4_7g20590 FvH4_7g20590
malus_domestica	MD01G1114800.v1.1 MD07G1182800.v1.1
prunus_persica	Prupe.2G221500_v2.0.a1 Prupe.2G221500_v2.0.a1
pyrus_communis	pycom01g14370 pycom07g17540
rosa_chinensis	RchiOBHm_Chr1g0364631
rosa_laevigata	RLG00000027471
rosa_multiflora	Rmu_ssc0000282.1_g000019
rosa_roxburghii	Rroxscaffold_4G00291790 Rroxscaffold_4G00292210
rosa_rugosa	Rorug01G0317200
rosa_samantha	Rh1AG326200 Rh1BG287400 Rh1CG304200 Rh1DG319100
rosa_wichuraiana	Rw1G028900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1885
AccBSI	CCGCTC	1 cut(s)	52
AccII	CGCG	3 cut(s)	1096, 1446, 2023
AclWI	GGATC	6 cut(s)	439, 610, 623, 987, 1263, 1742
AcsI	RAATTY	3 cut(s)	550, 1132, 1836
AcuI	CTGAAG	5 cut(s)	108, 873, 1188, 2034, 2060
AfaI	GTAC	5 cut(s)	1024, 1118, 2168, 2363, 2549
AfiI	CCNNNNNNNGG	8 cut(s)	219, 428, 541, 767, 1112, 1301, 1498, 2444
AgsI	TTSAA	8 cut(s)	167, 659, 749, 837, 1310, 1889, 2345, 2545
AhlI	ACTAGT	1 cut(s)	1576
AjnI	CCWGG	4 cut(s)	975, 1030, 1324, 1974
AjuI	GAANNNNNNNTTGG	4 cut(s)	902, 934, 2351, 2383
AloI	GAACNNNNNNTCC	2 cut(s)	720, 752
Alw21I	GWGCWC	2 cut(s)	193, 261
Alw26I	GTCTC	4 cut(s)	238, 464, 593, 2524
Alw44I	GTGCAC	1 cut(s)	257
AlwI	GGATC	6 cut(s)	439, 610, 623, 987, 1263, 1742
AlwNI	CAGNNNCTG	4 cut(s)	410, 869, 982, 1814
AoxI	GGCC	7 cut(s)	36, 456, 1125, 1489, 1649, 2094, 2378
ApaLI	GTGCAC	1 cut(s)	257
ApeKI	GCWGC	8 cut(s)	590, 869, 1385, 1537, 2045, 2048, 2063, 2323
ApoI	RAATTY	3 cut(s)	550, 1132, 1836
ArsI	GACNNNNNNTTYG	2 cut(s)	373, 405
AseI	ATTAAT	1 cut(s)	1662
AspLEI	GCGC	2 cut(s)	1096, 2023
AspS9I	GGNCC	6 cut(s)	381, 1353, 1461, 1490, 1818, 2379
AsuC2I	CCSGG	2 cut(s)	543, 2382
AsuHPI	GGTGA	5 cut(s)	542, 1028, 1358, 1805, 2217
AsuII	TTCGAA	1 cut(s)	548
AsuNHI	GCTAGC	1 cut(s)	985
AvaII	GGWCC	4 cut(s)	381, 1353, 1461, 1818
BaeGI	GKGCMC	1 cut(s)	261
BamHI	GGATCC	1 cut(s)	615
BanII	GRGCYC	3 cut(s)	193, 1939, 2247
BauI	CACGAG	1 cut(s)	718
Bbv12I	GWGCWC	2 cut(s)	193, 261
BbvCI	CCTCAGC	1 cut(s)	249
BbvI	GCAGC	8 cut(s)	602, 856, 1372, 1524, 2050, 2057, 2060, 2310
BccI	CCATC	5 cut(s)	509, 1049, 1186, 1471, 1853
BceAI	ACGGC	2 cut(s)	413, 2499
BciT130I	CCWGG	4 cut(s)	977, 1032, 1326, 1976
BcnI	CCSGG	2 cut(s)	543, 2382
BcoDI	GTCTC	4 cut(s)	238, 464, 593, 2524
BcuI	ACTAGT	1 cut(s)	1576
BfaI	CTAG	8 cut(s)	488, 986, 1046, 1202, 1317, 1577, 1620, 1718
BfmI	CTRYAG	1 cut(s)	2591
BfuAI	ACCTGC	1 cut(s)	1885
BglI	GCCNNNNNGGC	1 cut(s)	35
BglII	AGATCT	1 cut(s)	1882
Bme1390I	CCNGG	6 cut(s)	543, 977, 1032, 1326, 1976, 2382
Bme18I	GGWCC	4 cut(s)	381, 1353, 1461, 1818
BmgT120I	GGNCC	6 cut(s)	381, 1353, 1461, 1490, 1818, 2379
BmiI	GGNNCC	5 cut(s)	617, 1362, 1442, 1555, 1819
BmrFI	CCNGG	6 cut(s)	543, 977, 1032, 1326, 1976, 2382
BmsI	GCATC	9 cut(s)	214, 782, 817, 1440, 1504, 1513, 1974, 2008, 2032
BmtI	GCTAGC	1 cut(s)	989
BplI	GAGNNNNNCTC	2 cut(s)	770, 802
BpmI	CTGGAG	2 cut(s)	1539, 1958
Bpu10I	CCTNAGC	1 cut(s)	249
Bpu14I	TTCGAA	1 cut(s)	548
BpuEI	CTTGAG	1 cut(s)	2052
BpuMI	CCSGG	2 cut(s)	543, 2382
BsaBI	GATNNNNATC	2 cut(s)	1196, 2209
BsaI	GGTCTC	2 cut(s)	238, 464
BsaJI	CCNNGG	6 cut(s)	33, 905, 1325, 1356, 1389, 1509
BsaXI	ACNNNNNCTCC	4 cut(s)	1321, 1351, 1512, 1542
Bsc4I	CCNNNNNNNGG	8 cut(s)	219, 428, 541, 767, 1112, 1301, 1498, 2444
Bse118I	RCCGGY	1 cut(s)	733
Bse1I	ACTGG	7 cut(s)	320, 495, 591, 1355, 1503, 2179, 2417
Bse3DI	GCAATG	1 cut(s)	188
Bse8I	GATNNNNATC	2 cut(s)	1196, 2209
BseBI	CCWGG	4 cut(s)	977, 1032, 1326, 1976
BseDI	CCNNGG	6 cut(s)	33, 905, 1325, 1356, 1389, 1509
BseGI	GGATG	7 cut(s)	229, 641, 739, 1060, 1426, 1519, 1864
BseJI	GATNNNNATC	2 cut(s)	1196, 2209
BseLI	CCNNNNNNNGG	8 cut(s)	219, 428, 541, 767, 1112, 1301, 1498, 2444
BseMI	GCAATG	1 cut(s)	188
BseNI	ACTGG	7 cut(s)	320, 495, 591, 1355, 1503, 2179, 2417
BseRI	GAGGAG	2 cut(s)	794, 1286
BseSI	GKGCMC	1 cut(s)	261
BseXI	GCAGC	8 cut(s)	602, 856, 1372, 1524, 2050, 2057, 2060, 2310
BsgI	GTGCAG	1 cut(s)	1479
Bsh1236I	CGCG	3 cut(s)	1096, 1446, 2023
BshFI	GGCC	7 cut(s)	38, 458, 1127, 1491, 1651, 2096, 2380
BsiHKAI	GWGCWC	2 cut(s)	193, 261
BsiSI	CCGG	3 cut(s)	542, 734, 2382
BslFI	GGGAC	3 cut(s)	869, 1701, 2438
BslI	CCNNNNNNNGG	8 cut(s)	219, 428, 541, 767, 1112, 1301, 1498, 2444
BsmAI	GTCTC	4 cut(s)	238, 464, 593, 2524
BsmFI	GGGAC	3 cut(s)	869, 1701, 2438
BsmI	GAATGC	1 cut(s)	2527
BsnI	GGCC	7 cut(s)	38, 458, 1127, 1491, 1651, 2096, 2380
Bso31I	GGTCTC	2 cut(s)	238, 464
Bsp119I	TTCGAA	1 cut(s)	548
Bsp1286I	GDGCHC	4 cut(s)	193, 261, 1939, 2247
Bsp19I	CCATGG	2 cut(s)	1356, 1389
BspANI	GGCC	7 cut(s)	38, 458, 1127, 1491, 1651, 2096, 2380
BspFNI	CGCG	3 cut(s)	1096, 1446, 2023
BspHI	TCATGA	1 cut(s)	1375
BspLI	GGNNCC	5 cut(s)	617, 1362, 1442, 1555, 1819
BspMI	ACCTGC	1 cut(s)	1885
BspOI	GCTAGC	1 cut(s)	989
BspPI	GGATC	6 cut(s)	439, 610, 623, 987, 1263, 1742
BspQI	GCTCTTC	1 cut(s)	683
BspT104I	TTCGAA	1 cut(s)	548
BspTNI	GGTCTC	2 cut(s)	238, 464
BsrBI	CCGCTC	1 cut(s)	52
BsrDI	GCAATG	1 cut(s)	188
BsrFI	RCCGGY	1 cut(s)	733
BsrI	ACTGG	7 cut(s)	320, 495, 591, 1355, 1503, 2179, 2417
BssAI	RCCGGY	1 cut(s)	733
BssECI	CCNNGG	6 cut(s)	33, 905, 1325, 1356, 1389, 1509
BssSI	CACGAG	1 cut(s)	718
BssT1I	CCWWGG	5 cut(s)	33, 905, 1356, 1389, 1509
Bst2BI	CACGAG	1 cut(s)	718
Bst2UI	CCWGG	4 cut(s)	977, 1032, 1326, 1976
Bst4CI	ACNGT	5 cut(s)	845, 1121, 2166, 2429, 2569
Bst6I	CTCTTC	5 cut(s)	351, 683, 744, 2085, 2117
BstAPI	GCANNNNNTGC	2 cut(s)	410, 866
BstBI	TTCGAA	1 cut(s)	548
BstDSI	CCRYGG	2 cut(s)	1356, 1389
BstEII	GGTNACC	3 cut(s)	530, 1034, 1598
BstENI	CCTNNNNNAGG	1 cut(s)	1299
BstF5I	GGATG	7 cut(s)	229, 641, 739, 1060, 1426, 1519, 1864
BstFNI	CGCG	3 cut(s)	1096, 1446, 2023
BstHHI	GCGC	2 cut(s)	1096, 2023
BstMAI	GTCTC	4 cut(s)	238, 464, 593, 2524
BstNI	CCWGG	4 cut(s)	977, 1032, 1326, 1976
BstNSI	RCATGY	1 cut(s)	257
BstPI	GGTNACC	3 cut(s)	530, 1034, 1598
BstSCI	CCNGG	6 cut(s)	541, 975, 1030, 1324, 1974, 2380
BstSFI	CTRYAG	1 cut(s)	2591
BstSLI	GKGCMC	1 cut(s)	261
BstUI	CGCG	3 cut(s)	1096, 1446, 2023
BstV1I	GCAGC	8 cut(s)	602, 856, 1372, 1524, 2050, 2057, 2060, 2310
BstX2I	RGATCY	4 cut(s)	615, 979, 1747, 1882
BstYI	RGATCY	4 cut(s)	615, 979, 1747, 1882
BsuRI	GGCC	7 cut(s)	38, 458, 1127, 1491, 1651, 2096, 2380
BtgI	CCRYGG	2 cut(s)	1356, 1389
BtgZI	GCGATG	1 cut(s)	534
BtsCI	GGATG	7 cut(s)	229, 641, 739, 1060, 1426, 1519, 1864
BtsI	GCAGTG	2 cut(s)	2097, 2323
BtsIMutI	CAGTG	7 cut(s)	61, 1496, 2097, 2323, 2424, 2434, 2502
BveI	ACCTGC	1 cut(s)	1885
CaiI	CAGNNNCTG	4 cut(s)	410, 869, 982, 1814
CciI	TCATGA	1 cut(s)	1375
CfoI	GCGC	2 cut(s)	1096, 2023
Cfr10I	RCCGGY	1 cut(s)	733
Cfr13I	GGNCC	6 cut(s)	381, 1353, 1461, 1490, 1818, 2379
Csp6I	GTAC	5 cut(s)	1023, 1117, 2167, 2362, 2548
CviQI	GTAC	5 cut(s)	1023, 1117, 2167, 2362, 2548
Eam1104I	CTCTTC	5 cut(s)	351, 683, 744, 2085, 2117
EarI	CTCTTC	5 cut(s)	351, 683, 744, 2085, 2117
EciI	GGCGGA	1 cut(s)	4
Ecl136II	GAGCTC	1 cut(s)	191
Eco130I	CCWWGG	5 cut(s)	33, 905, 1356, 1389, 1509
Eco147I	AGGCCT	1 cut(s)	458
Eco24I	GRGCYC	3 cut(s)	193, 1939, 2247
Eco31I	GGTCTC	2 cut(s)	238, 464
Eco32I	GATATC	1 cut(s)	2586
Eco47I	GGWCC	4 cut(s)	381, 1353, 1461, 1818
Eco53kI	GAGCTC	1 cut(s)	191
Eco57I	CTGAAG	5 cut(s)	108, 873, 1188, 2034, 2060
Eco91I	GGTNACC	3 cut(s)	530, 1034, 1598
EcoICRI	GAGCTC	1 cut(s)	191
EcoNI	CCTNNNNNAGG	1 cut(s)	1299
EcoO65I	GGTNACC	3 cut(s)	530, 1034, 1598
EcoRI	GAATTC	1 cut(s)	550
EcoRII	CCWGG	4 cut(s)	975, 1030, 1324, 1974
EcoRV	GATATC	1 cut(s)	2586
EcoT14I	CCWWGG	5 cut(s)	33, 905, 1356, 1389, 1509
EcoT38I	GRGCYC	3 cut(s)	193, 1939, 2247
ErhI	CCWWGG	5 cut(s)	33, 905, 1356, 1389, 1509
FalI	AAGNNNNNCTT	2 cut(s)	2351, 2383
FaqI	GGGAC	3 cut(s)	869, 1701, 2438
FauNDI	CATATG	1 cut(s)	1090
FokI	GGATG	7 cut(s)	236, 628, 726, 1067, 1433, 1526, 1871
FriOI	GRGCYC	3 cut(s)	193, 1939, 2247
FspBI	CTAG	8 cut(s)	488, 986, 1046, 1202, 1317, 1577, 1620, 1718
GlaI	GCGC	2 cut(s)	1095, 2022
GsuI	CTGGAG	2 cut(s)	1539, 1958
HaeIII	GGCC	7 cut(s)	38, 458, 1127, 1491, 1651, 2096, 2380
HapII	CCGG	3 cut(s)	542, 734, 2382
HhaI	GCGC	2 cut(s)	1096, 2023
Hin6I	GCGC	2 cut(s)	1094, 2021
HinP1I	GCGC	2 cut(s)	1094, 2021
HincII	GTYRAC	3 cut(s)	325, 1574, 2180
HindII	GTYRAC	3 cut(s)	325, 1574, 2180
HpaII	CCGG	3 cut(s)	542, 734, 2382
HphI	GGTGA	5 cut(s)	542, 1028, 1358, 1805, 2217
Hpy166II	GTNNAC	6 cut(s)	259, 325, 381, 1574, 1821, 2180
Hpy188III	TCNNGA	9 cut(s)	650, 1046, 1317, 1376, 1880, 1889, 2078, 2240, 2286
Hpy8I	GTNNAC	6 cut(s)	259, 325, 381, 1574, 1821, 2180
HpyCH4III	ACNGT	5 cut(s)	845, 1121, 2166, 2429, 2569
HpyCH4IV	ACGT	3 cut(s)	327, 879, 1804
HpySE526I	ACGT	3 cut(s)	327, 879, 1804
HspAI	GCGC	2 cut(s)	1094, 2021
LguI	GCTCTTC	1 cut(s)	683
LmnI	GCTCC	5 cut(s)	113, 770, 922, 1559, 1977
Lsp1109I	GCAGC	8 cut(s)	602, 856, 1372, 1524, 2050, 2057, 2060, 2310
LweI	GCATC	9 cut(s)	214, 782, 817, 1440, 1504, 1513, 1974, 2008, 2032
MaeI	CTAG	8 cut(s)	488, 986, 1046, 1202, 1317, 1577, 1620, 1718
MaeII	ACGT	3 cut(s)	327, 879, 1804
MaeIII	GTNAC	7 cut(s)	530, 839, 1034, 1346, 1501, 1528, 1598
MbiI	CCGCTC	1 cut(s)	52
MfeI	CAATTG	1 cut(s)	214
MflI	RGATCY	4 cut(s)	615, 979, 1747, 1882
MhlI	GDGCHC	4 cut(s)	193, 261, 1939, 2247
MlyI	GAGTC	4 cut(s)	416, 779, 1422, 1820
MmeI	TCCRAC	2 cut(s)	900, 1848
MseI	TTAA	6 cut(s)	45, 306, 1662, 1740, 2009, 2468
MslI	CAYNNNNRTG	3 cut(s)	1374, 1380, 2495
MspI	CCGG	3 cut(s)	542, 734, 2382
MspR9I	CCNGG	6 cut(s)	543, 977, 1032, 1326, 1976, 2382
MunI	CAATTG	1 cut(s)	214
Mva1269I	GAATGC	1 cut(s)	2527
MvaI	CCWGG	4 cut(s)	977, 1032, 1326, 1976
MvnI	CGCG	3 cut(s)	1096, 1446, 2023
NciI	CCSGG	2 cut(s)	543, 2382
NcoI	CCATGG	2 cut(s)	1356, 1389
NdeI	CATATG	1 cut(s)	1090
NheI	GCTAGC	1 cut(s)	985
NlaIV	GGNNCC	5 cut(s)	617, 1362, 1442, 1555, 1819
NmeAIII	GCCGAG	2 cut(s)	212, 1958
NmuCI	GTSAC	5 cut(s)	530, 839, 1034, 1346, 1528
NspI	RCATGY	1 cut(s)	257
NspV	TTCGAA	1 cut(s)	548
PagI	TCATGA	1 cut(s)	1375
PceI	AGGCCT	1 cut(s)	458
PciSI	GCTCTTC	1 cut(s)	683
PcsI	WCGNNNNNNNCGW	1 cut(s)	801
PctI	GAATGC	1 cut(s)	2527
PfeI	GAWTC	8 cut(s)	491, 893, 1197, 1244, 1706, 1871, 2141, 2219
PflFI	GACNNNGTC	3 cut(s)	881, 2429, 2507
PleI	GAGTC	4 cut(s)	415, 779, 1421, 1819
PpsI	GAGTC	4 cut(s)	415, 779, 1421, 1819
PshBI	ATTAAT	1 cut(s)	1662
Psp124BI	GAGCTC	1 cut(s)	193
Psp6I	CCWGG	4 cut(s)	975, 1030, 1324, 1974
PspEI	GGTNACC	3 cut(s)	530, 1034, 1598
PspGI	CCWGG	4 cut(s)	975, 1030, 1324, 1974
PspN4I	GGNNCC	5 cut(s)	617, 1362, 1442, 1555, 1819
PspPI	GGNCC	6 cut(s)	381, 1353, 1461, 1490, 1818, 2379
PstNI	CAGNNNCTG	4 cut(s)	410, 869, 982, 1814
PsuI	RGATCY	4 cut(s)	615, 979, 1747, 1882
PsyI	GACNNNGTC	3 cut(s)	881, 2429, 2507
RsaI	GTAC	5 cut(s)	1024, 1118, 2168, 2363, 2549
RsaNI	GTAC	5 cut(s)	1023, 1117, 2167, 2362, 2548
RseI	CAYNNNNRTG	3 cut(s)	1374, 1380, 2495
SacI	GAGCTC	1 cut(s)	193
SapI	GCTCTTC	1 cut(s)	683
SaqAI	TTAA	6 cut(s)	45, 306, 1662, 1740, 2009, 2468
Sau96I	GGNCC	6 cut(s)	381, 1353, 1461, 1490, 1818, 2379
SchI	GAGTC	4 cut(s)	416, 779, 1422, 1820
ScrFI	CCNGG	6 cut(s)	543, 977, 1032, 1326, 1976, 2382
SduI	GDGCHC	4 cut(s)	193, 261, 1939, 2247
SfaNI	GCATC	9 cut(s)	214, 782, 817, 1440, 1504, 1513, 1974, 2008, 2032
SfcI	CTRYAG	1 cut(s)	2591
SfuI	TTCGAA	1 cut(s)	548
SinI	GGWCC	4 cut(s)	381, 1353, 1461, 1818
SmiMI	CAYNNNNRTG	3 cut(s)	1374, 1380, 2495
SmlI	CTYRAG	1 cut(s)	2067
SmoI	CTYRAG	1 cut(s)	2067
SpeI	ACTAGT	1 cut(s)	1576
SseBI	AGGCCT	1 cut(s)	458
SspI	AATATT	1 cut(s)	2391
SspMI	CTAG	8 cut(s)	488, 986, 1046, 1202, 1317, 1577, 1620, 1718
SstI	GAGCTC	1 cut(s)	193
StuI	AGGCCT	1 cut(s)	458
StyD4I	CCNGG	6 cut(s)	541, 975, 1030, 1324, 1974, 2380
StyI	CCWWGG	5 cut(s)	33, 905, 1356, 1389, 1509
TaaI	ACNGT	5 cut(s)	845, 1121, 2166, 2429, 2569
TaiI	ACGT	3 cut(s)	330, 882, 1807
TaqI	TCGA	3 cut(s)	548, 1269, 2287
TatI	WGTACW	1 cut(s)	2547
TauI	GCSGC	6 cut(s)	20, 23, 26, 29, 32, 958
TfiI	GAWTC	8 cut(s)	491, 893, 1197, 1244, 1706, 1871, 2141, 2219
Tru1I	TTAA	6 cut(s)	45, 306, 1662, 1740, 2009, 2468
Tru9I	TTAA	6 cut(s)	45, 306, 1662, 1740, 2009, 2468
TscAI	CASTG	7 cut(s)	61, 1503, 2104, 2323, 2424, 2434, 2502
TseFI	GTSAC	5 cut(s)	530, 839, 1034, 1346, 1528
TseI	GCWGC	8 cut(s)	590, 869, 1385, 1537, 2045, 2048, 2063, 2323
Tsp45I	GTSAC	5 cut(s)	530, 839, 1034, 1346, 1528
TspDTI	ATGAA	8 cut(s)	17, 728, 1145, 1364, 1392, 1629, 1848, 2103
TspRI	CASTG	7 cut(s)	61, 1503, 2104, 2323, 2424, 2434, 2502
Tth111I	GACNNNGTC	3 cut(s)	881, 2429, 2507
VneI	GTGCAC	1 cut(s)	257
VpaK11BI	GGWCC	4 cut(s)	381, 1353, 1461, 1818
VspI	ATTAAT	1 cut(s)	1662
XagI	CCTNNNNNAGG	1 cut(s)	1299
XapI	RAATTY	3 cut(s)	550, 1132, 1836
XbaI	TCTAGA	2 cut(s)	1045, 1316
XceI	RCATGY	1 cut(s)	257
XspI	CTAG	8 cut(s)	488, 986, 1046, 1202, 1317, 1577, 1620, 1718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.