Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0009519

Physical Location & Seq

Genomic Coordinates Reverse (-)

55954267 .. 55962477

Gene Structure 8211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG326200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGAAATCCTCCTCCGCCGCCGCCGCCGCCGCCAAGGCCACGCTTAATCCGCTCAGTGTCGCCTACGAGAACAAGAGGGATGCTTATGGATTTGCTGTGAGACCTCAGCATGTGCAACGCTACCGAGAATATGCCAATATCTACAAGGAAGAAGAGGAAGAAAGATCAGAAAGGTGGACCTCTTTTTTGCAACGGCAAGCAGAGTCTGCAAGATTATCTGTAAATGGATCATCTAATGCAGAAGATAACAAGGCCTTGCAAGCTGAGACCTCAGAGCAAGAACTAGATTCCAGTTCAGAGAAGGGTGTTGATGGCGATGTTTTAGGTGACCGGAAGCCGGGTTCGAATTCTCCAATAAAAAATGATAGCGAAATGGAGGAACTGGCAGCGAAGGAGACAAAAGCTCATGGGATCCAAATATGGAATGAGATTAGATCATCCCTTCACGAAATTGAAGAAATGATGAGTATTCGTGTAAAGAAGAAGAGCAATTTATCAAAGACAGAGCAGGACACGAGAAATGGAAAGCCGGTTCATCCTATTGAAGAGTTTAGACCCCCAAAAGGAGCATCTGAGGAGGACTCTGAGGACGAGTTCTACGACGTGGAGAGGTCAGACCAAGATGCCCCTTCAAGTGACAGTATAAATGCCTCTGCAACAGGTTCTGCTTCTGACGTAGTCCCTTCAGAATCCTTATTTCCTTGGAAACAAGAGTTGGAGGTTCTTGTTCGTGGGGGAGTACCCATGGCTCTGAGGGGAGAGCTTTGGCAAGCATTTGTGGGTGTGAAGTTGCGGCGTGTTGATAATTATTACCAGGATCTGCTAGCTTCTGAAACTAAAGCTGGCAGTGATGTGGAACAACATAGCTTGGACTCAGACATAAGTAGCAAGTTGTCAACAACTGATTCTGCATATGTACCCGAAAAGTGGAAAGGACAGATTGAGAAGGATCTACCTCGTACATTTCCAGGTCACCCTGCTCTAGATGTGGATGGTAGAAATGCTTTGAGGCGATTGCTTACTGCATATGCGCGACACAATCCTTCTGTTGGGTACTGTCAGGCCATGAATTTCTTTGCTGGCTTGCTACTACTTCTCATGCCCGAAGAAAATGCTTTTTGGGCTTTGATGGGAATCCTAGATGATTATTTTGAGGGCTATTACTCTGAGGAAATGATAGAATCTCAGGTGGATCAACTTGTTTTCGAGGAGTTGGTGCATGAGAGATTTCCTAAATTAGTCAATCATCTAGATTACCTGGGAGTGCAAGTGGCATGGGTGACTGGACCATGGTTCCTTTCCATATTCATGAATATGCTGCCATGGGAAAGTGTTCTACGAGTCTGGGATGTGCTTCTTTTTGAGGGGAACCGCGTGATGCTATTTAGGACTGCACTTGCTTTGATGGAGTTATATGGCCCTGCACTGGTTACTACCAAGGATGCTGGAGATGCAGTCACTCTGCTGCAATCGCTGGCTGGCTCCACATTTGATAGCAGTCAACTAGTATTGACAGCTTGCATGGGTTACCAAAATGTAAATGAAACTAGATTACAAGAGTTGAGAAATAAACATCGGCCTGCTGTAATTAATGCTATTGAGGAAAGATCAAAGGGACTTCGGGCTTGGAAGGATTCTCAGGGTCTAGCTTCTAAGCTATACAATTTTAAGCAAGATCCTAAATCAATGATAATAGAAACGAAGAAAGCAGAAAGAAATGGTGATTTATCACGTTCAGAGTCTGGGTCCACTAATGCAGATGAAATTCTTATTAGCTTGACTGGGGATGGGGAGTTGGATTCTGTTCCAGATCTTCAAGAGCAGGTGGTGTGGTTGAAGGTTGAATTATGCAAGCTGCTGGAGGATAAAAGATCTGCTGAACTCAGAGCTGAGGAGCTGGAGACAGCATTGATGGAGATGGTTAAGCAAGATAATCGTCGGCAATTGCATGCTAGGGTTGAGCAATTAGAGCAAGAGGTCGCCGATCTTAGCCGAGCCCTTTCTGATAAGCAGGAACAGGAGAGTGTCATGCTCCAGGTGTTGATGCGAGTAGAGCAAGAGCAGAGATTAACTGAAGATGCGCGAAGATTTTCTGAGCAAGATGCAGCAGCACAGAGATATGCTGCTCAAGTGCTTCAGGAAAAGTATGAAGAGGCCACTGCTTCCCTCGCGGAAATGGAGAAGAGAGTTGTTATGGCAGAATCAATGTTAGAGGCTACTTTACAGTACCAAACTGGTCAACAGAAAACACAACCTTCTCCACGATCTTTATCTTTAGATTCTTCACCCAGAAGCAATCAAGAGCCCACACAAGAGTTCCCTGCAAGAAAGATTAGTTTGCTATCTCGACCATTTGGACTTGGTTGGCGCAATCGCAGTGAGGTTAGTTCATGTAGACTTTTGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

802

Amino Acids

90.59

Weight (kDa)

4.93

Isoelectric Point (pI)

64.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	250 - 474	6.7e-52	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	335 - 492	1.3e-25	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009519)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55020 AT3G55020 AT3G55020
fragaria_vesca	FvH4_7g20590 FvH4_7g20590
malus_domestica	MD01G1114800.v1.1 MD07G1182800.v1.1
prunus_persica	Prupe.2G221500_v2.0.a1 Prupe.2G221500_v2.0.a1
pyrus_communis	pycom01g14370 pycom07g17540
rosa_chinensis	RchiOBHm_Chr1g0364631
rosa_laevigata	RLG00000027471
rosa_multiflora	Rmu_ssc0000282.1_g000019
rosa_roxburghii	Rroxscaffold_4G00291790 Rroxscaffold_4G00292210
rosa_rugosa	Rorug01G0317200
rosa_samantha	Rh1AG326200 Rh1BG287400 Rh1CG304200 Rh1DG319100
rosa_wichuraiana	Rw1G028900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1813
Acc36I	ACCTGC	1 cut(s)	1813
AccBSI	CCGCTC	1 cut(s)	52
AccI	GTMKAC	1 cut(s)	2395
AccII	CGCG	4 cut(s)	1033, 1374, 2083, 2171
AclWI	GGATC	7 cut(s)	235, 406, 419, 825, 957, 1200, 1670
AcsI	RAATTY	3 cut(s)	346, 1069, 1764
AcuI	CTGAAG	3 cut(s)	669, 2094, 2120
AfaI	GTAC	5 cut(s)	741, 918, 961, 1055, 2228
AfiI	CCNNNNNNNGG	5 cut(s)	337, 563, 927, 1049, 1426
AgsI	TTSAA	7 cut(s)	455, 545, 633, 1817, 1837, 1844, 2404
AhlI	ACTAGT	1 cut(s)	1504
AjiI	CACGTC	1 cut(s)	604
AjnI	CCWGG	4 cut(s)	813, 967, 1257, 2034
AjuI	GAANNNNNNNTTGG	2 cut(s)	698, 730
AloI	GAACNNNNNNTCC	4 cut(s)	325, 357, 516, 548
Alw26I	GTCTC	4 cut(s)	94, 260, 389, 1895
AlwI	GGATC	7 cut(s)	235, 406, 419, 825, 957, 1200, 1670
AlwNI	CAGNNNCTG	4 cut(s)	206, 665, 820, 1742
AoxI	GGCC	6 cut(s)	36, 252, 1062, 1417, 1577, 2154
ApeKI	GCWGC	7 cut(s)	386, 1318, 1465, 1855, 2105, 2108, 2123
ApoI	RAATTY	3 cut(s)	346, 1069, 1764
ArsI	GACNNNNNNTTYG	2 cut(s)	169, 201
AseI	ATTAAT	1 cut(s)	1590
Asp700I	GAANNNNTTC	2 cut(s)	1332, 2089
AspLEI	GCGC	3 cut(s)	1033, 2083, 2370
AspS9I	GGNCC	4 cut(s)	177, 1286, 1418, 1746
AsuC2I	CCSGG	1 cut(s)	339
AsuHPI	GGTGA	5 cut(s)	338, 965, 1291, 1733, 2277
AsuII	TTCGAA	1 cut(s)	344
AsuNHI	GCTAGC	1 cut(s)	823
AvaII	GGWCC	3 cut(s)	177, 1286, 1746
BamHI	GGATCC	1 cut(s)	411
BanII	GRGCYC	2 cut(s)	1999, 2307
BauI	CACGAG	1 cut(s)	514
BbvCI	CCTCAGC	2 cut(s)	105, 1890
BbvI	GCAGC	7 cut(s)	398, 1305, 1452, 1842, 2110, 2117, 2120
BccI	CCATC	7 cut(s)	305, 986, 1123, 1399, 1781, 1906, 1912
BceAI	ACGGC	1 cut(s)	209
BcgI	CGANNNNNNTGC	4 cut(s)	1094, 1128, 1916, 1950
BciT130I	CCWGG	4 cut(s)	815, 969, 1259, 2036
BcnI	CCSGG	1 cut(s)	339
BcoDI	GTCTC	4 cut(s)	94, 260, 389, 1895
BcuI	ACTAGT	1 cut(s)	1504
BfaI	CTAG	9 cut(s)	284, 824, 983, 1139, 1250, 1505, 1548, 1646, 1953
BfuAI	ACCTGC	1 cut(s)	1813
BglI	GCCNNNNNGGC	1 cut(s)	35
BglII	AGATCT	2 cut(s)	1810, 1871
Bme1390I	CCNGG	5 cut(s)	339, 815, 969, 1259, 2036
Bme18I	GGWCC	3 cut(s)	177, 1286, 1746
BmgBI	CACGTC	1 cut(s)	604
BmgT120I	GGNCC	4 cut(s)	177, 1286, 1418, 1746
BmiI	GGNNCC	5 cut(s)	413, 1295, 1370, 1483, 1747
BmrFI	CCNGG	5 cut(s)	339, 815, 969, 1259, 2036
BmrI	ACTGGG	1 cut(s)	1791
BmsI	GCATC	9 cut(s)	70, 578, 613, 1368, 1432, 1441, 2034, 2068, 2092
BmtI	GCTAGC	1 cut(s)	827
BmuI	ACTGGG	1 cut(s)	1791
BplI	GAGNNNNNCTC	2 cut(s)	566, 598
BpmI	CTGGAG	4 cut(s)	1467, 1880, 1919, 2018
Bpu10I	CCTNAGC	2 cut(s)	105, 1890
Bpu14I	TTCGAA	1 cut(s)	344
BpuEI	CTTGAG	1 cut(s)	2112
BpuMI	CCSGG	1 cut(s)	339
BsaBI	GATNNNNATC	2 cut(s)	1133, 2269
BsaI	GGTCTC	2 cut(s)	94, 260
BsaJI	CCNNGG	7 cut(s)	33, 701, 744, 1258, 1289, 1322, 1437
BsaWI	WCCGGW	1 cut(s)	330
BsaXI	ACNNNNNCTCC	4 cut(s)	1254, 1284, 1440, 1470
Bsc4I	CCNNNNNNNGG	5 cut(s)	337, 563, 927, 1049, 1426
Bse118I	RCCGGY	1 cut(s)	529
Bse1I	ACTGG	6 cut(s)	291, 387, 1288, 1431, 1786, 2239
Bse8I	GATNNNNATC	2 cut(s)	1133, 2269
BseBI	CCWGG	4 cut(s)	815, 969, 1259, 2036
BseDI	CCNNGG	7 cut(s)	33, 701, 744, 1258, 1289, 1322, 1437
BseGI	GGATG	7 cut(s)	85, 437, 535, 997, 1354, 1447, 1792
BseJI	GATNNNNATC	2 cut(s)	1133, 2269
BseLI	CCNNNNNNNGG	5 cut(s)	337, 563, 927, 1049, 1426
BseNI	ACTGG	6 cut(s)	291, 387, 1288, 1431, 1786, 2239
BseRI	GAGGAG	3 cut(s)	590, 1223, 1907
BseXI	GCAGC	7 cut(s)	398, 1305, 1452, 1842, 2110, 2117, 2120
BsgI	GTGCAG	2 cut(s)	1377, 1407
Bsh1236I	CGCG	4 cut(s)	1033, 1374, 2083, 2171
BshFI	GGCC	6 cut(s)	38, 254, 1064, 1419, 1579, 2156
BsiSI	CCGG	3 cut(s)	331, 338, 530
BslFI	GGGAC	2 cut(s)	665, 1629
BslI	CCNNNNNNNGG	5 cut(s)	337, 563, 927, 1049, 1426
BsmAI	GTCTC	4 cut(s)	94, 260, 389, 1895
BsmFI	GGGAC	2 cut(s)	665, 1629
BsnI	GGCC	6 cut(s)	38, 254, 1064, 1419, 1579, 2156
Bso31I	GGTCTC	2 cut(s)	94, 260
Bsp119I	TTCGAA	1 cut(s)	344
Bsp1286I	GDGCHC	2 cut(s)	1999, 2307
Bsp19I	CCATGG	3 cut(s)	744, 1289, 1322
BspANI	GGCC	6 cut(s)	38, 254, 1064, 1419, 1579, 2156
BspFNI	CGCG	4 cut(s)	1033, 1374, 2083, 2171
BspHI	TCATGA	1 cut(s)	1308
BspLI	GGNNCC	5 cut(s)	413, 1295, 1370, 1483, 1747
BspMI	ACCTGC	1 cut(s)	1813
BspOI	GCTAGC	1 cut(s)	827
BspPI	GGATC	7 cut(s)	235, 406, 419, 825, 957, 1200, 1670
BspQI	GCTCTTC	1 cut(s)	479
BspT104I	TTCGAA	1 cut(s)	344
BspTNI	GGTCTC	2 cut(s)	94, 260
BsrBI	CCGCTC	1 cut(s)	52
BsrFI	RCCGGY	1 cut(s)	529
BsrI	ACTGG	6 cut(s)	291, 387, 1288, 1431, 1786, 2239
BssAI	RCCGGY	1 cut(s)	529
BssECI	CCNNGG	7 cut(s)	33, 701, 744, 1258, 1289, 1322, 1437
BssSI	CACGAG	1 cut(s)	514
BssT1I	CCWWGG	6 cut(s)	33, 701, 744, 1289, 1322, 1437
Bst2BI	CACGAG	1 cut(s)	514
Bst2UI	CCWGG	4 cut(s)	815, 969, 1259, 2036
Bst4CI	ACNGT	3 cut(s)	641, 1058, 2226
Bst6I	CTCTTC	5 cut(s)	147, 479, 540, 2145, 2177
BstAPI	GCANNNNNTGC	1 cut(s)	206
BstBI	TTCGAA	1 cut(s)	344
BstDSI	CCRYGG	3 cut(s)	744, 1289, 1322
BstEII	GGTNACC	3 cut(s)	326, 971, 1526
BstF5I	GGATG	7 cut(s)	85, 437, 535, 997, 1354, 1447, 1792
BstFNI	CGCG	4 cut(s)	1033, 1374, 2083, 2171
BstHHI	GCGC	3 cut(s)	1033, 2083, 2370
BstMAI	GTCTC	4 cut(s)	94, 260, 389, 1895
BstNI	CCWGG	4 cut(s)	815, 969, 1259, 2036
BstNSI	RCATGY	2 cut(s)	113, 1952
BstPI	GGTNACC	3 cut(s)	326, 971, 1526
BstSCI	CCNGG	5 cut(s)	337, 813, 967, 1257, 2034
BstUI	CGCG	4 cut(s)	1033, 1374, 2083, 2171
BstV1I	GCAGC	7 cut(s)	398, 1305, 1452, 1842, 2110, 2117, 2120
BstX2I	RGATCY	6 cut(s)	411, 817, 949, 1675, 1810, 1871
BstYI	RGATCY	6 cut(s)	411, 817, 949, 1675, 1810, 1871
BsuRI	GGCC	6 cut(s)	38, 254, 1064, 1419, 1579, 2156
BtgI	CCRYGG	3 cut(s)	744, 1289, 1322
BtgZI	GCGATG	1 cut(s)	330
BtrI	CACGTC	1 cut(s)	604
BtsCI	GGATG	7 cut(s)	85, 437, 535, 997, 1354, 1447, 1792
BtsI	GCAGTG	3 cut(s)	853, 2157, 2383
BtsIMutI	CAGTG	5 cut(s)	61, 853, 1424, 2157, 2383
BveI	ACCTGC	1 cut(s)	1813
CaiI	CAGNNNCTG	4 cut(s)	206, 665, 820, 1742
CciI	TCATGA	1 cut(s)	1308
CfoI	GCGC	3 cut(s)	1033, 2083, 2370
Cfr10I	RCCGGY	1 cut(s)	529
Cfr13I	GGNCC	4 cut(s)	177, 1286, 1418, 1746
Csp6I	GTAC	5 cut(s)	740, 917, 960, 1054, 2227
CviQI	GTAC	5 cut(s)	740, 917, 960, 1054, 2227
Eam1104I	CTCTTC	5 cut(s)	147, 479, 540, 2145, 2177
EarI	CTCTTC	5 cut(s)	147, 479, 540, 2145, 2177
EciI	GGCGGA	1 cut(s)	4
Eco130I	CCWWGG	6 cut(s)	33, 701, 744, 1289, 1322, 1437
Eco147I	AGGCCT	1 cut(s)	254
Eco24I	GRGCYC	2 cut(s)	1999, 2307
Eco31I	GGTCTC	2 cut(s)	94, 260
Eco47I	GGWCC	3 cut(s)	177, 1286, 1746
Eco57I	CTGAAG	3 cut(s)	669, 2094, 2120
Eco91I	GGTNACC	3 cut(s)	326, 971, 1526
EcoO65I	GGTNACC	3 cut(s)	326, 971, 1526
EcoRI	GAATTC	1 cut(s)	346
EcoRII	CCWGG	4 cut(s)	813, 967, 1257, 2034
EcoT14I	CCWWGG	6 cut(s)	33, 701, 744, 1289, 1322, 1437
EcoT38I	GRGCYC	2 cut(s)	1999, 2307
ErhI	CCWWGG	6 cut(s)	33, 701, 744, 1289, 1322, 1437
FaqI	GGGAC	2 cut(s)	665, 1629
FauNDI	CATATG	2 cut(s)	913, 1027
FblI	GTMKAC	1 cut(s)	2395
FokI	GGATG	7 cut(s)	92, 424, 522, 1004, 1361, 1454, 1799
FriOI	GRGCYC	2 cut(s)	1999, 2307
FspBI	CTAG	9 cut(s)	284, 824, 983, 1139, 1250, 1505, 1548, 1646, 1953
GlaI	GCGC	3 cut(s)	1032, 2082, 2369
GsuI	CTGGAG	4 cut(s)	1467, 1880, 1919, 2018
HaeIII	GGCC	6 cut(s)	38, 254, 1064, 1419, 1579, 2156
HapII	CCGG	3 cut(s)	331, 338, 530
HhaI	GCGC	3 cut(s)	1033, 2083, 2370
Hin6I	GCGC	3 cut(s)	1031, 2081, 2368
HinP1I	GCGC	3 cut(s)	1031, 2081, 2368
HincII	GTYRAC	3 cut(s)	897, 1502, 2240
HindII	GTYRAC	3 cut(s)	897, 1502, 2240
HpaII	CCGG	3 cut(s)	331, 338, 530
HphI	GGTGA	5 cut(s)	338, 965, 1291, 1733, 2277
Hpy166II	GTNNAC	6 cut(s)	177, 897, 1502, 1749, 2240, 2396
Hpy188III	TCNNGA	9 cut(s)	446, 983, 1250, 1309, 1808, 1817, 2138, 2300, 2346
Hpy8I	GTNNAC	6 cut(s)	177, 897, 1502, 1749, 2240, 2396
Hpy99I	CGWCG	2 cut(s)	605, 1941
HpyCH4III	ACNGT	3 cut(s)	641, 1058, 2226
HpyCH4IV	ACGT	3 cut(s)	603, 675, 1732
HpySE526I	ACGT	3 cut(s)	603, 675, 1732
HspAI	GCGC	3 cut(s)	1031, 2081, 2368
LguI	GCTCTTC	1 cut(s)	479
LmnI	GCTCC	4 cut(s)	566, 1487, 1894, 2037
Lsp1109I	GCAGC	7 cut(s)	398, 1305, 1452, 1842, 2110, 2117, 2120
LweI	GCATC	9 cut(s)	70, 578, 613, 1368, 1432, 1441, 2034, 2068, 2092
MaeI	CTAG	9 cut(s)	284, 824, 983, 1139, 1250, 1505, 1548, 1646, 1953
MaeII	ACGT	3 cut(s)	603, 675, 1732
MaeIII	GTNAC	7 cut(s)	326, 635, 971, 1279, 1429, 1456, 1526
MbiI	CCGCTC	1 cut(s)	52
MfeI	CAATTG	1 cut(s)	1943
MflI	RGATCY	6 cut(s)	411, 817, 949, 1675, 1810, 1871
MhlI	GDGCHC	2 cut(s)	1999, 2307
MlyI	GAGTC	5 cut(s)	212, 575, 866, 1350, 1748
MmeI	TCCRAC	2 cut(s)	696, 1776
MroXI	GAANNNNTTC	2 cut(s)	1332, 2089
MseI	TTAA	5 cut(s)	45, 1590, 1668, 1923, 2069
MslI	CAYNNNNRTG	2 cut(s)	1307, 1313
MspI	CCGG	3 cut(s)	331, 338, 530
MspR9I	CCNGG	5 cut(s)	339, 815, 969, 1259, 2036
MunI	CAATTG	1 cut(s)	1943
MvaI	CCWGG	4 cut(s)	815, 969, 1259, 2036
MvnI	CGCG	4 cut(s)	1033, 1374, 2083, 2171
NciI	CCSGG	1 cut(s)	339
NcoI	CCATGG	3 cut(s)	744, 1289, 1322
NdeI	CATATG	2 cut(s)	913, 1027
NheI	GCTAGC	1 cut(s)	823
NlaIV	GGNNCC	5 cut(s)	413, 1295, 1370, 1483, 1747
NmeAIII	GCCGAG	1 cut(s)	2018
NmuCI	GTSAC	5 cut(s)	326, 635, 971, 1279, 1456
NspI	RCATGY	2 cut(s)	113, 1952
NspV	TTCGAA	1 cut(s)	344
PaeI	GCATGC	1 cut(s)	1952
PagI	TCATGA	1 cut(s)	1308
PaqCI	CACCTGC	1 cut(s)	1813
PceI	AGGCCT	1 cut(s)	254
PciSI	GCTCTTC	1 cut(s)	479
PcsI	WCGNNNNNNNCGW	1 cut(s)	597
PdmI	GAANNNNTTC	2 cut(s)	1332, 2089
PfeI	GAWTC	9 cut(s)	287, 689, 905, 1134, 1181, 1634, 1799, 2201, 2279
PflFI	GACNNNGTC	1 cut(s)	677
PleI	GAGTC	5 cut(s)	211, 575, 866, 1349, 1747
PpsI	GAGTC	5 cut(s)	211, 575, 866, 1349, 1747
PshBI	ATTAAT	1 cut(s)	1590
Psp6I	CCWGG	4 cut(s)	813, 967, 1257, 2034
PspEI	GGTNACC	3 cut(s)	326, 971, 1526
PspGI	CCWGG	4 cut(s)	813, 967, 1257, 2034
PspN4I	GGNNCC	5 cut(s)	413, 1295, 1370, 1483, 1747
PspPI	GGNCC	4 cut(s)	177, 1286, 1418, 1746
PstNI	CAGNNNCTG	4 cut(s)	206, 665, 820, 1742
PsuI	RGATCY	6 cut(s)	411, 817, 949, 1675, 1810, 1871
PsyI	GACNNNGTC	1 cut(s)	677
RsaI	GTAC	5 cut(s)	741, 918, 961, 1055, 2228
RsaNI	GTAC	5 cut(s)	740, 917, 960, 1054, 2227
RseI	CAYNNNNRTG	2 cut(s)	1307, 1313
SapI	GCTCTTC	1 cut(s)	479
SaqAI	TTAA	5 cut(s)	45, 1590, 1668, 1923, 2069
Sau96I	GGNCC	4 cut(s)	177, 1286, 1418, 1746
SchI	GAGTC	5 cut(s)	212, 575, 866, 1350, 1748
ScrFI	CCNGG	5 cut(s)	339, 815, 969, 1259, 2036
SduI	GDGCHC	2 cut(s)	1999, 2307
SfaNI	GCATC	9 cut(s)	70, 578, 613, 1368, 1432, 1441, 2034, 2068, 2092
SfuI	TTCGAA	1 cut(s)	344
SinI	GGWCC	3 cut(s)	177, 1286, 1746
SmiMI	CAYNNNNRTG	2 cut(s)	1307, 1313
SmlI	CTYRAG	1 cut(s)	2127
SmoI	CTYRAG	1 cut(s)	2127
SpeI	ACTAGT	1 cut(s)	1504
SphI	GCATGC	1 cut(s)	1952
SseBI	AGGCCT	1 cut(s)	254
SspMI	CTAG	9 cut(s)	284, 824, 983, 1139, 1250, 1505, 1548, 1646, 1953
StuI	AGGCCT	1 cut(s)	254
StyD4I	CCNGG	5 cut(s)	337, 813, 967, 1257, 2034
StyI	CCWWGG	6 cut(s)	33, 701, 744, 1289, 1322, 1437
TaaI	ACNGT	3 cut(s)	641, 1058, 2226
TaiI	ACGT	3 cut(s)	606, 678, 1735
TaqI	TCGA	3 cut(s)	344, 1206, 2347
TauI	GCSGC	6 cut(s)	20, 23, 26, 29, 32, 796
TfiI	GAWTC	9 cut(s)	287, 689, 905, 1134, 1181, 1634, 1799, 2201, 2279
Tru1I	TTAA	5 cut(s)	45, 1590, 1668, 1923, 2069
Tru9I	TTAA	5 cut(s)	45, 1590, 1668, 1923, 2069
TscAI	CASTG	5 cut(s)	61, 853, 1431, 2164, 2383
TseFI	GTSAC	5 cut(s)	326, 635, 971, 1279, 1456
TseI	GCWGC	7 cut(s)	386, 1318, 1465, 1855, 2105, 2108, 2123
Tsp45I	GTSAC	5 cut(s)	326, 635, 971, 1279, 1456
TspDTI	ATGAA	9 cut(s)	17, 524, 1082, 1297, 1325, 1557, 1776, 2163, 2379
TspRI	CASTG	5 cut(s)	61, 853, 1431, 2164, 2383
Tth111I	GACNNNGTC	1 cut(s)	677
VpaK11BI	GGWCC	3 cut(s)	177, 1286, 1746
VspI	ATTAAT	1 cut(s)	1590
XapI	RAATTY	3 cut(s)	346, 1069, 1764
XbaI	TCTAGA	2 cut(s)	982, 1249
XceI	RCATGY	2 cut(s)	113, 1952
XmiI	GTMKAC	1 cut(s)	2395
XmnI	GAANNNNTTC	2 cut(s)	1332, 2089
XspI	CTAG	9 cut(s)	284, 824, 983, 1139, 1250, 1505, 1548, 1646, 1953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.