MD07G1189400.v1.1

Domain of unknown function (DUF4378)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0006066
Physical Location & Seq
Reverse (-)
26963192 .. 26966840
3649 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1189400.v1.1.491

Sequence Viewer

Length: 2085 bp
ATGGAAGCTACACCTACACCAAGTGTTATAGCAAAACTGATGGGTCTTGATGACTCGCCACCTCAGGCGCCTGTCCAAAAACAAAGAAGAGTGCTGTCTGAGAATTACCTACGCAGAGTTGCTTCCATTGGTGCCAGAGAGTCTCGCCATTCATTCAAGTTGAGAGTACCTGAAGTGACGGATTATGGGGGAAGTTTTTTGATCGGCGAGCATCTGCATAATCCGCAAGTTTCCCCTTTAACAAGTTTCCCCTGCAAGCTACAAAATGCCACTTTGCTTGAAACATTTGAGAATGGAATTGTCACAGAATCCCTTGGAGAAGTTGGACTCATAAATTTAGATGATTTTTCAAGATCGCAATTGGGGTCAAACAAAGAAGGACGCATTCCCGGTAGTAGAATTGTTGTTGTGAAACCAAAGCATGGAAAGGCCGAGAATTCTGCGAGATGTTTCCCTTCTTTGAGTTCCCTTGATGTTTCTCATTCCAGTGATCAAAGGTGCGTGGAGTTTTCTAGTCCTAGTAGTGGGAAAATACATGTTGAAGTAAAAGAAAGAAAGAACTTGGCATTTGACATGGAACCAGTAAGCTTAAGGTCTACAGTTTTGAGGGATATATTGGGGAAGCTAACTGAAAATACAAGTTGCAACAAAGCCAACATTGATACAAAGGTATCACAGTTAGGATCCAGGGGTGGTGACTCAGTTGCAATGAAAACTGAATCGATGAGGTTGTCCTTTTCTTATTCAGATGGGTCATATGGATCCCAGGAAGCCAAAAAGCAACTCTCAGAACGACGGAAGATGACTAATAAGCTGGAAGAAGTAGGAATGGCTTGTAAAGGCACTACCCTCGGGAATTTGCTTGCCATGTCTGCCCATGAAACAGGCTCAAGAACATTGGGTCACAAGCTTTTTAGGCATCATCAATCAAAAAGACAGCTCGTAAGGGTTGACCTGAAAGACCTAGACCTCAGTAAGTTTAGAACACAGCAAGATAAATATGCAGCTCTTTGCAATGAATGGAGTTTCAAGCCAAAAGGGTCTATTAATTTGGGGCAGCACAAGTCAATGGAGTACAAATTCAACCAGAATGATGGTTTCGGCCCTGTAAAGTTGAGATCCAACCGCAAGAAACTCCAATCTTATCCTAGCCTAGGAGGTGTTCAAACCATGGAAAAGACTCCCGGGAATTTCAAGAAGTGGCAATCTGGACGCAGAACCTGCATCTTTGTAGACAAAAATGACGATTCTTCCAGTCATGGAACAGATGCTTCAGTTCAGCAGGAAACATCCACTGAATGCTACAAAGAAAGTCCATTTCTTTTGCACTGCTCCACCACAGAGTCAGATTCTATGACGAGCTTGGAGGAGGCTTATCAGCCTAGCCCAGTTTCAGTTCTGGAACCACTATATAGTGGAGAGCGATCGGCTACACCAGAATTCCTGCAAAGTATGAGTGTTGACATCACCGACGACTCTGATGCATACTCGGAAGGATATGGAATGATTGTTTCAAGTGATGATGGTTGTGATATTAATGAAGGATCTGCAAGCAGTTACAGAGAAAATGAAGATTCAATGAGATTTTTCAGAGTTGAAGAAAGCAGAGACTATTCCTACCTTGTTGATGTGTTATCGGAGATAGGTTTTTATGTTAGGAACTCGATAATGGACTTAGATACCTGGTGCCCTCCAGAATGGCCGGTAAGCATTTTTGTCTTTGAGACCCTGGAGAAGAAGTTTGGCGATCAGGCTTCATGGAAAAGGTCGGACAGGAGGCTTTTGTTTGACCGTATAAATGCAGGGCTGATGGAGATTTTCGAGCCTTGTCTGGGTGTTCCCGTGTGGACAAAGCCTGTGTCTAGAAGGATTAGATCCACGTCAAGCGAGGAGATGATAGAGGAAGATCTGTGGATGTTGCTTGTTAGCCAAGAGAAGGAAACAGGAAAGGACTCCACCAAAAAGGTGCTAGGAAGGGAGATTGAGTTAGATTTAGGAGATGATATTGATGGTATTGGTAGAGAAATTGAGAGATTTTTGTTCGATAAGCTCGTAGCGGAGTTTGTTAGCTTGGAGAGTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 VARLMGL

Protein Analysis

695

Amino Acids

77.87

Weight (kDa)

5.73

Isoelectric Point (pI)

56.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 537 - 687 3.3e-27 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1229
AccB1I GGYRCC 3 cut(s) 67, 131, 1686
AccB7I CCANNNNNTGG 1 cut(s) 422
AccI GTMKAC 2 cut(s) 596, 1233
AciI CCGC 3 cut(s) 224, 1126, 2057
AclWI GGATC 7 cut(s) 678, 691, 756, 769, 1113, 1552, 1869
AcoI YGGCCR 1 cut(s) 1700
AcsI RAATTY 6 cut(s) 334, 436, 856, 1079, 1189, 1439
AcuI CTGAAG 2 cut(s) 192, 1257
AcyI GRCGYC 1 cut(s) 68
AdeI CACNNNGTG 1 cut(s) 23
AfaI GTAC 2 cut(s) 168, 1076
AfiI CCNNNNNNNGG 5 cut(s) 422, 524, 1154, 1832, 1936
AflII CTTAAG 1 cut(s) 589
AflIII ACRYGT 1 cut(s) 535
AjiI CACGTC 1 cut(s) 1881
AjnI CCWGG 4 cut(s) 686, 765, 1682, 1728
Alw26I GTCTC 3 cut(s) 147, 1602, 1718
AlwI GGATC 7 cut(s) 678, 691, 756, 769, 1113, 1552, 1869
AlwNI CAGNNNCTG 1 cut(s) 1221
Ama87I CYCGRG 2 cut(s) 851, 1184
AoxI GGCC 3 cut(s) 429, 1102, 1700
ApeKI GCWGC 2 cut(s) 1004, 1057
ApoI RAATTY 6 cut(s) 334, 436, 856, 1079, 1189, 1439
ArsI GACNNNNNNTTYG 2 cut(s) 1844, 1876
AseI ATTAAT 2 cut(s) 1047, 1536
AspA2I CCTAGG 1 cut(s) 1153
AspLEI GCGC 1 cut(s) 70
AspS9I GGNCC 1 cut(s) 1103
AsuC2I CCSGG 3 cut(s) 390, 1185, 1186
AsuHPI GGTGA 2 cut(s) 707, 1459
AvaI CYCGRG 2 cut(s) 851, 1184
AvrII CCTAGG 1 cut(s) 1153
AxyI CCTNAGG 1 cut(s) 63
BaeGI GKGCMC 1 cut(s) 1691
BaeI ACNNNNGTAYC 4 cut(s) 654, 654, 687, 687
BamHI GGATCC 2 cut(s) 683, 761
BanI GGYRCC 3 cut(s) 67, 131, 1686
BbvI GCAGC 2 cut(s) 1016, 1069
BccI CCATC 6 cut(s) 34, 743, 1088, 1517, 1804, 2003
BcgI CGANNNNNNTGC 6 cut(s) 422, 456, 832, 866, 1463, 1497
BciT130I CCWGG 4 cut(s) 688, 767, 1684, 1730
BclI TGATCA 1 cut(s) 490
BcnI CCSGG 3 cut(s) 390, 1185, 1186
BcoDI GTCTC 3 cut(s) 147, 1602, 1718
BfaI CTAG 8 cut(s) 513, 519, 965, 1149, 1154, 1383, 1863, 1970
BfmI CTRYAG 1 cut(s) 597
BfoI RGCGCY 1 cut(s) 71
BfrI CTTAAG 1 cut(s) 589
BfuAI ACCTGC 1 cut(s) 1229
BglII AGATCT 1 cut(s) 1906
BisI GCNGC 2 cut(s) 1005, 1058
BlnI CCTAGG 1 cut(s) 1153
BlsI GCNGC 2 cut(s) 1006, 1059
Bme1390I CCNGG 7 cut(s) 390, 688, 767, 1185, 1186, 1684, 1730
BmeT110I CYCGRG 2 cut(s) 851, 1184
BmgBI CACGTC 1 cut(s) 1881
BmgT120I GGNCC 1 cut(s) 1103
BmiI GGNNCC 7 cut(s) 69, 133, 579, 685, 763, 1404, 1688
BmrFI CCNGG 7 cut(s) 390, 688, 767, 1185, 1186, 1684, 1730
BmrI ACTGGG 1 cut(s) 1382
BmsI GCATC 5 cut(s) 220, 928, 1233, 1258, 1471
BmuI ACTGGG 1 cut(s) 1382
BpmI CTGGAG 2 cut(s) 1677, 1751
BpuEI CTTGAG 1 cut(s) 874
BpuMI CCSGG 3 cut(s) 390, 1185, 1186
Bsa29I ATCGAT 1 cut(s) 722
BsaHI GRCGYC 1 cut(s) 68
BsaI GGTCTC 1 cut(s) 1718
BsaJI CCNNGG 8 cut(s) 313, 687, 765, 850, 1153, 1170, 1184, 1728
BsaXI ACNNNNNCTCC 5 cut(s) 1724, 1754, 1970, 2000, 2066
Bsc4I CCNNNNNNNGG 5 cut(s) 422, 524, 1154, 1832, 1936
Bse118I RCCGGY 1 cut(s) 1702
Bse1I ACTGG 4 cut(s) 486, 581, 1254, 1388
Bse21I CCTNAGG 1 cut(s) 63
Bse3DI GCAATG 2 cut(s) 714, 1021
BseBI CCWGG 4 cut(s) 688, 767, 1684, 1730
BseCI ATCGAT 1 cut(s) 722
BseDI CCNNGG 8 cut(s) 313, 687, 765, 850, 1153, 1170, 1184, 1728
BseGI GGATG 2 cut(s) 1289, 1920
BseLI CCNNNNNNNGG 5 cut(s) 422, 524, 1154, 1832, 1936
BseMI GCAATG 2 cut(s) 714, 1021
BseMII CTCAG 5 cut(s) 77, 90, 714, 801, 985
BseNI ACTGG 4 cut(s) 486, 581, 1254, 1388
BseRI GAGGAG 2 cut(s) 1382, 1904
BseSI GKGCMC 1 cut(s) 1691
BseXI GCAGC 2 cut(s) 1016, 1069
Bsh1285I CGRYCG 1 cut(s) 1427
BshFI GGCC 3 cut(s) 431, 1104, 1702
BshNI GGYRCC 3 cut(s) 67, 131, 1686
BshVI ATCGAT 1 cut(s) 722
BsiEI CGRYCG 1 cut(s) 1427
BsiHKCI CYCGRG 2 cut(s) 851, 1184
BsiSI CCGG 3 cut(s) 390, 1185, 1703
BslI CCNNNNNNNGG 5 cut(s) 422, 524, 1154, 1832, 1936
BsmAI GTCTC 3 cut(s) 147, 1602, 1718
BsmI GAATGC 2 cut(s) 384, 1304
BsnI GGCC 3 cut(s) 431, 1104, 1702
Bso31I GGTCTC 1 cut(s) 1718
BsoBI CYCGRG 2 cut(s) 851, 1184
Bsp1286I GDGCHC 1 cut(s) 1691
Bsp19I CCATGG 1 cut(s) 1170
BspACI CCGC 3 cut(s) 224, 1126, 2057
BspANI GGCC 3 cut(s) 431, 1104, 1702
BspCNI CTCAG 5 cut(s) 76, 91, 713, 800, 984
BspDI ATCGAT 1 cut(s) 722
BspLI GGNNCC 7 cut(s) 69, 133, 579, 685, 763, 1404, 1688
BspMI ACCTGC 1 cut(s) 1229
BspPI GGATC 7 cut(s) 678, 691, 756, 769, 1113, 1552, 1869
BspT107I GGYRCC 3 cut(s) 67, 131, 1686
BspTI CTTAAG 1 cut(s) 589
BspTNI GGTCTC 1 cut(s) 1718
BsrDI GCAATG 2 cut(s) 714, 1021
BsrFI RCCGGY 1 cut(s) 1702
BsrI ACTGG 4 cut(s) 486, 581, 1254, 1388
BssAI RCCGGY 1 cut(s) 1702
BssECI CCNNGG 8 cut(s) 313, 687, 765, 850, 1153, 1170, 1184, 1728
BssNI GRCGYC 1 cut(s) 68
BssT1I CCWWGG 3 cut(s) 313, 1153, 1170
Bst2UI CCWGG 4 cut(s) 688, 767, 1684, 1730
Bst4CI ACNGT 3 cut(s) 601, 678, 1793
Bst6I CTCTTC 1 cut(s) 82
BstACI GRCGYC 1 cut(s) 68
BstAFI CTTAAG 1 cut(s) 589
BstAPI GCANNNNNTGC 1 cut(s) 1221
BstC8I GCNNGC 4 cut(s) 209, 257, 864, 1552
BstDEI CTNAG 6 cut(s) 63, 99, 700, 787, 971, 1675
BstDSI CCRYGG 1 cut(s) 1170
BstENI CCTNNNNNAGG 1 cut(s) 1152
BstF5I GGATG 2 cut(s) 1289, 1920
BstH2I RGCGCY 1 cut(s) 71
BstHHI GCGC 1 cut(s) 70
BstMAI GTCTC 3 cut(s) 147, 1602, 1718
BstMCI CGRYCG 1 cut(s) 1427
BstMWI GCNNNNNNNGC 4 cut(s) 223, 872, 916, 1221
BstNI CCWGG 4 cut(s) 688, 767, 1684, 1730
BstNSI RCATGY 1 cut(s) 539
BstSCI CCNGG 7 cut(s) 388, 686, 765, 1183, 1184, 1682, 1728
BstSFI CTRYAG 1 cut(s) 597
BstSLI GKGCMC 1 cut(s) 1691
BstV1I GCAGC 2 cut(s) 1016, 1069
BstX2I RGATCY 6 cut(s) 683, 761, 1118, 1544, 1874, 1906
BstXI CCANNNNNNTGG 1 cut(s) 1094
BstYI RGATCY 6 cut(s) 683, 761, 1118, 1544, 1874, 1906
Bsu15I ATCGAT 1 cut(s) 722
Bsu36I CCTNAGG 1 cut(s) 63
BsuRI GGCC 3 cut(s) 431, 1104, 1702
BsuTUI ATCGAT 1 cut(s) 722
BtgI CCRYGG 1 cut(s) 1170
BtrI CACGTC 1 cut(s) 1881
BtsCI GGATG 2 cut(s) 1289, 1920
BtsI GCAGTG 1 cut(s) 1327
BtsIMutI CAGTG 3 cut(s) 493, 1293, 1327
BveI ACCTGC 1 cut(s) 1229
Cac8I GCNNGC 4 cut(s) 209, 257, 864, 1552
CaiI CAGNNNCTG 1 cut(s) 1221
CfoI GCGC 1 cut(s) 70
Cfr10I RCCGGY 1 cut(s) 1702
Cfr13I GGNCC 1 cut(s) 1103
Cfr9I CCCGGG 1 cut(s) 1184
ClaI ATCGAT 1 cut(s) 722
CseI GACGC 2 cut(s) 390, 1221
CsiI ACCWGGT 1 cut(s) 1682
Csp6I GTAC 2 cut(s) 167, 1075
CspCI CAANNNNNGTGG 2 cut(s) 259, 294
CviAII CATG 8 cut(s) 422, 536, 574, 868, 878, 1171, 1259, 1758
CviQI GTAC 2 cut(s) 167, 1075
DdeI CTNAG 6 cut(s) 63, 99, 700, 787, 971, 1675
DinI GGCGCC 1 cut(s) 69
DraIII CACNNNGTG 1 cut(s) 23
EaeI YGGCCR 1 cut(s) 1700
Eam1104I CTCTTC 1 cut(s) 82
EarI CTCTTC 1 cut(s) 82
Eco130I CCWWGG 3 cut(s) 313, 1153, 1170
Eco31I GGTCTC 1 cut(s) 1718
Eco57I CTGAAG 2 cut(s) 192, 1257
Eco81I CCTNAGG 1 cut(s) 63
Eco88I CYCGRG 2 cut(s) 851, 1184
EcoNI CCTNNNNNAGG 1 cut(s) 1152
EcoRI GAATTC 2 cut(s) 436, 1439
EcoRII CCWGG 4 cut(s) 686, 765, 1682, 1728
EcoT14I CCWWGG 3 cut(s) 313, 1153, 1170
EcoT22I ATGCAT 1 cut(s) 1486
EgeI GGCGCC 1 cut(s) 69
EheI GGCGCC 1 cut(s) 69
ErhI CCWWGG 3 cut(s) 313, 1153, 1170
FaeI CATG 8 cut(s) 425, 539, 577, 871, 881, 1174, 1262, 1761
FatI CATG 8 cut(s) 421, 535, 573, 867, 877, 1170, 1258, 1757
FauNDI CATATG 1 cut(s) 757
FbaI TGATCA 1 cut(s) 490
FblI GTMKAC 2 cut(s) 596, 1233
Fnu4HI GCNGC 2 cut(s) 1005, 1058
FokI GGATG 2 cut(s) 1276, 1927
Fsp4HI GCNGC 2 cut(s) 1005, 1058
FspBI CTAG 8 cut(s) 513, 519, 965, 1149, 1154, 1383, 1863, 1970
GlaI GCGC 1 cut(s) 69
GluI GCNGC 2 cut(s) 1005, 1058
GsuI CTGGAG 2 cut(s) 1677, 1751
HaeII RGCGCY 1 cut(s) 71
HaeIII GGCC 3 cut(s) 431, 1104, 1702
HapII CCGG 3 cut(s) 390, 1185, 1703
HgaI GACGC 2 cut(s) 390, 1221
HhaI GCGC 1 cut(s) 70
Hin1I GRCGYC 1 cut(s) 68
Hin1II CATG 8 cut(s) 425, 539, 577, 871, 881, 1174, 1262, 1761
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HincII GTYRAC 2 cut(s) 952, 1462
HindII GTYRAC 2 cut(s) 952, 1462
HindIII AAGCTT 2 cut(s) 586, 908
HpaII CCGG 3 cut(s) 390, 1185, 1703
HphI GGTGA 2 cut(s) 707, 1459
Hpy166II GTNNAC 5 cut(s) 597, 952, 1234, 1462, 1848
Hpy188I TCNGA 9 cut(s) 100, 748, 790, 1348, 1480, 1492, 1592, 1639, 1771
Hpy188III TCNNGA 9 cut(s) 47, 351, 853, 891, 1195, 1209, 1400, 1694, 1863
Hpy8I GTNNAC 5 cut(s) 597, 952, 1234, 1462, 1848
Hpy99I CGWCG 2 cut(s) 798, 1475
HpyAV CCTTC 7 cut(s) 371, 465, 1487, 1535, 1860, 1930, 1968
HpyCH4III ACNGT 3 cut(s) 601, 678, 1793
HpyCH4IV ACGT 1 cut(s) 1880
HpyF10VI GCNNNNNNNGC 4 cut(s) 223, 872, 916, 1221
HpyF3I CTNAG 6 cut(s) 63, 99, 700, 787, 971, 1675
HpySE526I ACGT 1 cut(s) 1880
Hsp92I GRCGYC 1 cut(s) 68
Hsp92II CATG 8 cut(s) 425, 539, 577, 871, 881, 1174, 1262, 1761
HspAI GCGC 1 cut(s) 68
KasI GGCGCC 1 cut(s) 67
Ksp22I TGATCA 1 cut(s) 490
LmnI GCTCC 1 cut(s) 1337
Lsp1109I GCAGC 2 cut(s) 1016, 1069
LweI GCATC 5 cut(s) 220, 928, 1233, 1258, 1471
MabI ACCWGGT 1 cut(s) 1682
MaeI CTAG 8 cut(s) 513, 519, 965, 1149, 1154, 1383, 1863, 1970
MaeII ACGT 1 cut(s) 1880
MaeIII GTNAC 5 cut(s) 175, 301, 695, 902, 1556
MboII GAAGA 8 cut(s) 99, 811, 830, 1242, 1583, 1610, 1747, 1916
MfeI CAATTG 1 cut(s) 359
MflI RGATCY 6 cut(s) 683, 761, 1118, 1544, 1874, 1906
MhlI GDGCHC 1 cut(s) 1691
Mly113I GGCGCC 1 cut(s) 68
MlyI GAGTC 8 cut(s) 47, 149, 321, 692, 1174, 1352, 1469, 1946
MmeI TCCRAC 3 cut(s) 304, 1146, 1749
Mph1103I ATGCAT 1 cut(s) 1486
MseI TTAA 4 cut(s) 239, 590, 1047, 1536
MslI CAYNNNNRTG 1 cut(s) 486
MspCI CTTAAG 1 cut(s) 589
MspI CCGG 3 cut(s) 390, 1185, 1703
MspR9I CCNGG 7 cut(s) 390, 688, 767, 1185, 1186, 1684, 1730
MunI CAATTG 1 cut(s) 359
Mva1269I GAATGC 2 cut(s) 384, 1304
MvaI CCWGG 4 cut(s) 688, 767, 1684, 1730
MwoI GCNNNNNNNGC 4 cut(s) 223, 872, 916, 1221
NarI GGCGCC 1 cut(s) 68
NciI CCSGG 3 cut(s) 390, 1185, 1186
NcoI CCATGG 1 cut(s) 1170
NdeI CATATG 1 cut(s) 757
NlaIII CATG 8 cut(s) 425, 539, 577, 871, 881, 1174, 1262, 1761
NlaIV GGNNCC 7 cut(s) 69, 133, 579, 685, 763, 1404, 1688
NmeAIII GCCGAG 1 cut(s) 457
NmuCI GTSAC 4 cut(s) 175, 301, 695, 902
NsiI ATGCAT 1 cut(s) 1486
NspI RCATGY 1 cut(s) 539
PciI ACATGT 1 cut(s) 535
PcsI WCGNNNNNNNCGW 1 cut(s) 2049
PctI GAATGC 2 cut(s) 384, 1304
PfeI GAWTC 5 cut(s) 308, 719, 1247, 1349, 1574
PflMI CCANNNNNTGG 1 cut(s) 422
PkrI GCNGC 2 cut(s) 1006, 1059
Ple19I CGATCG 1 cut(s) 1427
PleI GAGTC 8 cut(s) 47, 148, 321, 692, 1174, 1351, 1469, 1946
PluTI GGCGCC 1 cut(s) 71
PpsI GAGTC 8 cut(s) 47, 148, 321, 692, 1174, 1351, 1469, 1946
PscI ACATGT 1 cut(s) 535
PshBI ATTAAT 2 cut(s) 1047, 1536
Psp6I CCWGG 4 cut(s) 686, 765, 1682, 1728
PspGI CCWGG 4 cut(s) 686, 765, 1682, 1728
PspN4I GGNNCC 7 cut(s) 69, 133, 579, 685, 763, 1404, 1688
PspPI GGNCC 1 cut(s) 1103
PstNI CAGNNNCTG 1 cut(s) 1221
PsuI RGATCY 6 cut(s) 683, 761, 1118, 1544, 1874, 1906
PvuI CGATCG 1 cut(s) 1427
RsaI GTAC 2 cut(s) 168, 1076
RsaNI GTAC 2 cut(s) 167, 1075
RseI CAYNNNNRTG 1 cut(s) 486
SaqAI TTAA 4 cut(s) 239, 590, 1047, 1536
SatI GCNGC 2 cut(s) 1005, 1058
Sau96I GGNCC 1 cut(s) 1103
SchI GAGTC 8 cut(s) 47, 149, 321, 692, 1174, 1352, 1469, 1946
ScrFI CCNGG 7 cut(s) 390, 688, 767, 1185, 1186, 1684, 1730
SduI GDGCHC 1 cut(s) 1691
SexAI ACCWGGT 1 cut(s) 1682
SfaNI GCATC 5 cut(s) 220, 928, 1233, 1258, 1471
SfcI CTRYAG 1 cut(s) 597
SfoI GGCGCC 1 cut(s) 69
SmaI CCCGGG 1 cut(s) 1186
SmiMI CAYNNNNRTG 1 cut(s) 486
SmlI CTYRAG 2 cut(s) 589, 889
SmoI CTYRAG 2 cut(s) 589, 889
SsiI CCGC 3 cut(s) 224, 1126, 2057
SspDI GGCGCC 1 cut(s) 67
SspMI CTAG 8 cut(s) 513, 519, 965, 1149, 1154, 1383, 1863, 1970
StyD4I CCNGG 7 cut(s) 388, 686, 765, 1183, 1184, 1682, 1728
StyI CCWWGG 3 cut(s) 313, 1153, 1170
TaaI ACNGT 3 cut(s) 601, 678, 1793
TaiI ACGT 1 cut(s) 1883
TaqI TCGA 4 cut(s) 722, 1664, 1821, 2043
TatI WGTACW 1 cut(s) 1074
TfiI GAWTC 5 cut(s) 308, 719, 1247, 1349, 1574
Tru1I TTAA 4 cut(s) 239, 590, 1047, 1536
Tru9I TTAA 4 cut(s) 239, 590, 1047, 1536
TscAI CASTG 3 cut(s) 493, 1300, 1334
TseFI GTSAC 4 cut(s) 175, 301, 695, 902
TseI GCWGC 2 cut(s) 1004, 1057
Tsp45I GTSAC 4 cut(s) 175, 301, 695, 902
TspDTI ATGAA 7 cut(s) 141, 725, 894, 1032, 1554, 1584, 1746
TspGWI ACGGA 2 cut(s) 194, 811
TspMI CCCGGG 1 cut(s) 1184
TspRI CASTG 3 cut(s) 493, 1300, 1334
Van91I CCANNNNNTGG 1 cut(s) 422
Vha464I CTTAAG 1 cut(s) 589
VspI ATTAAT 2 cut(s) 1047, 1536
XagI CCTNNNNNAGG 1 cut(s) 1152
XapI RAATTY 6 cut(s) 334, 436, 856, 1079, 1189, 1439
XbaI TCTAGA 1 cut(s) 1862
XceI RCATGY 1 cut(s) 539
XmaI CCCGGG 1 cut(s) 1184
XmaJI CCTAGG 1 cut(s) 1153
XmiI GTMKAC 2 cut(s) 596, 1233
XspI CTAG 8 cut(s) 513, 519, 965, 1149, 1154, 1383, 1863, 1970
Zsp2I ATGCAT 1 cut(s) 1486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.