MD07G1203900.v1.1

BTB POZ and MATH domain-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Forward (+)
28152239 .. 28157135
4897 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1203900.v1.1.491

Sequence Viewer

Length: 1284 bp
ATGCCGCCGATTCGGAAACATTCCAGAGGGGCGAAATCGGGTGAATCCATGGGGAATTCGAAGCCTGGGTTCGACCAGGAATCGTGCTCGAGATCGATCAGCGAGACTGTGAACGGCTCCCACCGGTTCACGATAAAGGGGTATTCGCTGGCCAAAGGGATGGGAGCCGGGAAGTACCTGATGAGCGATACGTTCACGGTGGGCGGATACGATTGGGCAATTTACTTTTACCCCGACGGTAAAAACCCCGAGGATAGCAACGCGTACGTCTCGGTTTTCATTGCTTTGGTTAGTGAGGGTACGGATGTGAGGGCTCTGTTCGAGCTGACGTTGGTGGATCAGACGGACAGTGGGAAGGACAAGGTGCACAGTCACTTTGATCGCGCTCTCGAGGGCGGGCCGTACACGCTGAAGTACAGAGGCAGCATGTGTGGGGGTTACAAGAAATTCTTCAGAAGATCAATCCTAGAAACTTCTGAGTTCCTTAAGGATGATTGCCTTGTATTGAACTGCACTGTTGGAGTTGTCAGAACTCGCCTTGAGCAACCAAAACAATTTACAATCACTGTTCCATCATCAGACATGGGACGAGACCTAAAGGACTTTCTAGATTCTGAAGCTGGTTGTGACATAGTTTTTCAGGTTGGTGATGAACAGTTTAAAGCTCACAAGTTGATACTTGCTGCTCGGTCTCGTGTATTTAGAGCGCAGTTTTATGGACTTGTCGGGGATTGTAACGTAGATAAAGTAGTTGTGAAGGATGTTGAGCCCTTCATCTTCAAGGCAATGCTTCTCTTTATTTACACGGACAAACTTCCTGATACACACGAAGTTATGGGCTCATCACCTTTGTGCACATTCACTGTCATGGTGCAGCATCTGTTGGCAGCTGCAGACCTGTATAATCTAGATCGACTGAAATTGTTGTGTGAATCAAAGTTATGTGAAGAAATCACTACTGAGACAGTGGCGACTACACTTGCGCTTGCTGAACAGCATCAATGCCGACAGCTTAAGGATGTCTGTCTTAAATTTACAGCAAATCCGTCGAACTTGGGAGCTGTAATGCAATCAGAAGGGTACAAGCATCTAGAAGAGAGCTGCCCATCAATGTTGGTAGAGCTGCTGGAGACATTTGCAGCGGTGGATGACAATTCTAGTCTTCTGTCAAGTCGGAAGAGGAGTGGCAGCAGCATATATGGACTAGATTTGCCAGCAGATGGGGGTGGGACTGCAGCAGAATCAGCAAATCCCAATGGTAGGCGCGTGAGGCGGCGGTTTTAG

Protein Analysis

428

Amino Acids

47.22

Weight (kDa)

6.18

Isoelectric Point (pI)

41.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MATH_2 PF22486 40 - 173 1.2e-27 MATH domain
BTB PF00651 200 - 316 1.6e-23 BTB/POZ domain
BACK_BPM_SPOP PF24570 322 - 376 2.1e-28 BPM/SPOP, BACK domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1220
AccII CGCG 3 cut(s) 263, 384, 1266
AciI CCGC 6 cut(s) 5, 204, 396, 1142, 1273, 1276
AclWI GGATC 1 cut(s) 345
AcoI YGGCCR 1 cut(s) 150
AcsI RAATTY 3 cut(s) 55, 446, 1031
AcuI CTGAAG 3 cut(s) 431, 436, 636
AfaI GTAC 6 cut(s) 176, 266, 301, 404, 416, 1082
AfiI CCNNNNNNNGG 2 cut(s) 1220, 1260
AflII CTTAAG 2 cut(s) 485, 1013
AflIII ACRYGT 1 cut(s) 261
AgeI ACCGGT 1 cut(s) 123
AgsI TTSAA 2 cut(s) 508, 781
AjnI CCWGG 2 cut(s) 64, 75
AleI CACNNNNGTG 1 cut(s) 850
AluBI AGCT 8 cut(s) 325, 620, 665, 890, 1012, 1061, 1101, 1123
AluI AGCT 8 cut(s) 325, 620, 665, 890, 1012, 1061, 1101, 1123
Alw21I GWGCWC 3 cut(s) 89, 369, 857
Alw26I GTCTC 6 cut(s) 98, 274, 585, 696, 956, 1124
Alw44I GTGCAC 2 cut(s) 365, 853
AlwI GGATC 1 cut(s) 345
AlwNI CAGNNNCTG 1 cut(s) 880
Ama87I CYCGRG 3 cut(s) 88, 248, 389
AoxI GGCC 2 cut(s) 150, 398
ApaLI GTGCAC 2 cut(s) 365, 853
ApoI RAATTY 3 cut(s) 55, 446, 1031
AsiGI ACCGGT 1 cut(s) 123
Asp700I GAANNNNTTC 1 cut(s) 449
AspLEI GCGC 4 cut(s) 386, 709, 985, 1266
AspS9I GGNCC 1 cut(s) 398
AsuC2I CCSGG 1 cut(s) 169
AsuHPI GGTGA 3 cut(s) 53, 659, 837
AsuII TTCGAA 1 cut(s) 59
AvaI CYCGRG 3 cut(s) 88, 248, 389
BaeGI GKGCMC 2 cut(s) 369, 857
BaeI ACNNNNGTAYC 2 cut(s) 291, 324
BalI TGGCCA 1 cut(s) 152
BanII GRGCYC 3 cut(s) 316, 771, 842
BauI CACGAG 1 cut(s) 693
BbsI GAAGAC 1 cut(s) 1154
Bbv12I GWGCWC 3 cut(s) 89, 369, 857
BccI CCATC 4 cut(s) 154, 580, 1114, 1214
BceAI ACGGC 2 cut(s) 130, 385
BcgI CGANNNNNNTGC 2 cut(s) 1029, 1063
BciT130I CCWGG 2 cut(s) 66, 77
BciVI GTATCC 1 cut(s) 200
BcnI CCSGG 1 cut(s) 169
BcoDI GTCTC 6 cut(s) 98, 274, 585, 696, 956, 1124
BfaI CTAG 6 cut(s) 467, 608, 908, 1091, 1158, 1205
BfmI CTRYAG 2 cut(s) 891, 1233
BfrI CTTAAG 2 cut(s) 485, 1013
BfuI GTATCC 1 cut(s) 200
Bme1390I CCNGG 3 cut(s) 66, 77, 169
BmeT110I CYCGRG 3 cut(s) 88, 248, 389
BmgT120I GGNCC 1 cut(s) 398
BmiI GGNNCC 2 cut(s) 118, 166
BmrFI CCNGG 3 cut(s) 66, 77, 169
BmsI GCATC 3 cut(s) 886, 1006, 1096
BpiI GAAGAC 1 cut(s) 1154
BpmI CTGGAG 1 cut(s) 1148
Bpu14I TTCGAA 1 cut(s) 59
BpuEI CTTGAG 1 cut(s) 560
BpuMI CCSGG 1 cut(s) 169
Bsa29I ATCGAT 1 cut(s) 95
BsaI GGTCTC 2 cut(s) 585, 696
BsaJI CCNNGG 3 cut(s) 48, 65, 249
BsaWI WCCGGW 1 cut(s) 123
Bsc4I CCNNNNNNNGG 2 cut(s) 1220, 1260
Bse118I RCCGGY 1 cut(s) 123
Bse3DI GCAATG 2 cut(s) 279, 792
BseBI CCWGG 2 cut(s) 66, 77
BseCI ATCGAT 1 cut(s) 95
BseDI CCNNGG 3 cut(s) 48, 65, 249
BseGI GGATG 6 cut(s) 165, 310, 496, 766, 1024, 1153
BseLI CCNNNNNNNGG 2 cut(s) 1220, 1260
BseMI GCAATG 2 cut(s) 279, 792
BseMII CTCAG 2 cut(s) 468, 951
BseRI GAGGAG 1 cut(s) 1195
BseSI GKGCMC 2 cut(s) 369, 857
BsgI GTGCAG 2 cut(s) 496, 893
Bsh1236I CGCG 3 cut(s) 263, 384, 1266
BshFI GGCC 2 cut(s) 152, 400
BshTI ACCGGT 1 cut(s) 123
BshVI ATCGAT 1 cut(s) 95
BsiHKAI GWGCWC 3 cut(s) 89, 369, 857
BsiHKCI CYCGRG 3 cut(s) 88, 248, 389
BsiSI CCGG 2 cut(s) 124, 168
BsiWI CGTACG 1 cut(s) 264
BslFI GGGAC 2 cut(s) 600, 1243
BslI CCNNNNNNNGG 2 cut(s) 1220, 1260
BsmAI GTCTC 6 cut(s) 98, 274, 585, 696, 956, 1124
BsmBI CGTCTC 1 cut(s) 274
BsmFI GGGAC 2 cut(s) 600, 1243
BsnI GGCC 2 cut(s) 152, 400
Bso31I GGTCTC 2 cut(s) 585, 696
BsoBI CYCGRG 3 cut(s) 88, 248, 389
Bsp119I TTCGAA 1 cut(s) 59
Bsp1286I GDGCHC 6 cut(s) 89, 316, 369, 771, 842, 857
Bsp143I GATC 6 cut(s) 92, 96, 337, 379, 458, 910
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 6 cut(s) 5, 204, 396, 1142, 1273, 1276
BspANI GGCC 2 cut(s) 152, 400
BspCNI CTCAG 2 cut(s) 469, 952
BspDI ATCGAT 1 cut(s) 95
BspFNI CGCG 3 cut(s) 263, 384, 1266
BspLI GGNNCC 2 cut(s) 118, 166
BspMAI CTGCAG 2 cut(s) 895, 1237
BspPI GGATC 1 cut(s) 345
BspT104I TTCGAA 1 cut(s) 59
BspTI CTTAAG 2 cut(s) 485, 1013
BspTNI GGTCTC 2 cut(s) 585, 696
BsrDI GCAATG 2 cut(s) 279, 792
BsrFI RCCGGY 1 cut(s) 123
BssAI RCCGGY 1 cut(s) 123
BssECI CCNNGG 3 cut(s) 48, 65, 249
BssMI GATC 6 cut(s) 92, 96, 337, 379, 458, 910
BssSI CACGAG 1 cut(s) 693
BssT1I CCWWGG 1 cut(s) 48
Bst2BI CACGAG 1 cut(s) 693
Bst2UI CCWGG 2 cut(s) 66, 77
Bst6I CTCTTC 2 cut(s) 1089, 1172
BstAFI CTTAAG 2 cut(s) 485, 1013
BstBI TTCGAA 1 cut(s) 59
BstC8I GCNNGC 4 cut(s) 150, 398, 987, 1215
BstDEI CTNAG 2 cut(s) 477, 960
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 6 cut(s) 165, 310, 496, 766, 1024, 1153
BstFNI CGCG 3 cut(s) 263, 384, 1266
BstHHI GCGC 4 cut(s) 386, 709, 985, 1266
BstKTI GATC 6 cut(s) 95, 99, 340, 382, 461, 913
BstMAI GTCTC 6 cut(s) 98, 274, 585, 696, 956, 1124
BstMBI GATC 6 cut(s) 92, 96, 337, 379, 458, 910
BstMWI GCNNNNNNNGC 3 cut(s) 406, 1244, 1270
BstNI CCWGG 2 cut(s) 66, 77
BstNSI RCATGY 1 cut(s) 430
BstSCI CCNGG 3 cut(s) 64, 75, 167
BstSFI CTRYAG 2 cut(s) 891, 1233
BstSLI GKGCMC 2 cut(s) 369, 857
BstUI CGCG 3 cut(s) 263, 384, 1266
BstV2I GAAGAC 1 cut(s) 1154
BstXI CCANNNNNNTGG 1 cut(s) 160
Bsu15I ATCGAT 1 cut(s) 95
BsuI GTATCC 1 cut(s) 200
BsuRI GGCC 2 cut(s) 152, 400
BsuTUI ATCGAT 1 cut(s) 95
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 6 cut(s) 165, 310, 496, 766, 1024, 1153
BtsIMutI CAGTG 5 cut(s) 355, 513, 564, 861, 972
Cac8I GCNNGC 4 cut(s) 150, 398, 987, 1215
CaiI CAGNNNCTG 1 cut(s) 880
CfoI GCGC 4 cut(s) 386, 709, 985, 1266
Cfr10I RCCGGY 1 cut(s) 123
Cfr13I GGNCC 1 cut(s) 398
ClaI ATCGAT 1 cut(s) 95
Csp6I GTAC 6 cut(s) 175, 265, 300, 403, 415, 1081
CspAI ACCGGT 1 cut(s) 123
CviAII CATG 4 cut(s) 49, 427, 583, 868
CviQI GTAC 6 cut(s) 175, 265, 300, 403, 415, 1081
DdeI CTNAG 2 cut(s) 477, 960
DpnI GATC 6 cut(s) 94, 98, 339, 381, 460, 912
DpnII GATC 6 cut(s) 92, 96, 337, 379, 458, 910
DraI TTTAAA 1 cut(s) 661
EaeI YGGCCR 1 cut(s) 150
Eam1104I CTCTTC 2 cut(s) 1089, 1172
EarI CTCTTC 2 cut(s) 1089, 1172
EciI GGCGGA 1 cut(s) 219
Eco130I CCWWGG 1 cut(s) 48
Eco24I GRGCYC 3 cut(s) 316, 771, 842
Eco31I GGTCTC 2 cut(s) 585, 696
Eco57I CTGAAG 3 cut(s) 431, 436, 636
Eco88I CYCGRG 3 cut(s) 88, 248, 389
EcoRI GAATTC 1 cut(s) 55
EcoRII CCWGG 2 cut(s) 64, 75
EcoT14I CCWWGG 1 cut(s) 48
EcoT38I GRGCYC 3 cut(s) 316, 771, 842
ErhI CCWWGG 1 cut(s) 48
Esp3I CGTCTC 1 cut(s) 274
FaeI CATG 4 cut(s) 52, 430, 586, 871
FalI AAGNNNNNCTT 2 cut(s) 434, 466
FaqI GGGAC 2 cut(s) 600, 1243
FatI CATG 4 cut(s) 48, 426, 582, 867
FauI CCCGC 1 cut(s) 389
FokI GGATG 6 cut(s) 172, 317, 503, 773, 1031, 1160
FriOI GRGCYC 3 cut(s) 316, 771, 842
FspBI CTAG 6 cut(s) 467, 608, 908, 1091, 1158, 1205
GlaI GCGC 4 cut(s) 385, 708, 984, 1265
GsuI CTGGAG 1 cut(s) 1148
HaeIII GGCC 2 cut(s) 152, 400
HapII CCGG 2 cut(s) 124, 168
HhaI GCGC 4 cut(s) 386, 709, 985, 1266
Hin1II CATG 4 cut(s) 52, 430, 586, 871
Hin6I GCGC 4 cut(s) 384, 707, 983, 1264
HinP1I GCGC 4 cut(s) 384, 707, 983, 1264
HinfI GANTC 6 cut(s) 10, 44, 80, 611, 932, 1241
HpaII CCGG 2 cut(s) 124, 168
HphI GGTGA 3 cut(s) 53, 659, 837
Hpy166II GTNNAC 6 cut(s) 112, 129, 195, 367, 405, 855
Hpy188I TCNGA 9 cut(s) 15, 342, 455, 478, 530, 580, 616, 1075, 1176
Hpy188III TCNNGA 8 cut(s) 24, 90, 130, 389, 608, 818, 908, 1091
Hpy8I GTNNAC 6 cut(s) 112, 129, 195, 367, 405, 855
Hpy99I CGWCG 2 cut(s) 239, 1051
HpyAV CCTTC 4 cut(s) 349, 751, 781, 1070
HpyCH4IV ACGT 4 cut(s) 191, 267, 329, 738
HpyCH4V TGCA 8 cut(s) 367, 513, 855, 874, 893, 1069, 1139, 1235
HpyF10VI GCNNNNNNNGC 3 cut(s) 406, 1244, 1270
HpyF3I CTNAG 2 cut(s) 477, 960
HpySE526I ACGT 4 cut(s) 191, 267, 329, 738
Hsp92II CATG 4 cut(s) 52, 430, 586, 871
HspAI GCGC 4 cut(s) 384, 707, 983, 1264
Kzo9I GATC 6 cut(s) 92, 96, 337, 379, 458, 910
LmnI GCTCC 3 cut(s) 122, 164, 1058
LweI GCATC 3 cut(s) 886, 1006, 1096
MaeI CTAG 6 cut(s) 467, 608, 908, 1091, 1158, 1205
MaeII ACGT 4 cut(s) 191, 267, 329, 738
MaeIII GTNAC 4 cut(s) 371, 437, 626, 734
MalI GATC 6 cut(s) 94, 98, 339, 381, 460, 912
MboI GATC 6 cut(s) 92, 96, 337, 379, 458, 910
MboII GAAGA 7 cut(s) 442, 468, 769, 959, 1106, 1154, 1189
MhlI GDGCHC 6 cut(s) 89, 316, 369, 771, 842, 857
MlsI TGGCCA 1 cut(s) 152
MluCI AATT 7 cut(s) 55, 219, 446, 554, 920, 1031, 1153
MluI ACGCGT 1 cut(s) 261
MluNI TGGCCA 1 cut(s) 152
MmeI TCCRAC 2 cut(s) 499, 1154
MnlI CCTC 8 cut(s) 20, 244, 289, 303, 385, 413, 1173, 1263
Mox20I TGGCCA 1 cut(s) 152
MroXI GAANNNNTTC 1 cut(s) 449
MscI TGGCCA 1 cut(s) 152
MseI TTAA 4 cut(s) 486, 660, 1014, 1029
MslI CAYNNNNRTG 2 cut(s) 850, 866
Msp20I TGGCCA 1 cut(s) 152
MspA1I CMGCKG 2 cut(s) 890, 1142
MspCI CTTAAG 2 cut(s) 485, 1013
MspI CCGG 2 cut(s) 124, 168
MspR9I CCNGG 3 cut(s) 66, 77, 169
MvaI CCWGG 2 cut(s) 66, 77
MvnI CGCG 3 cut(s) 263, 384, 1266
MwoI GCNNNNNNNGC 3 cut(s) 406, 1244, 1270
NciI CCSGG 1 cut(s) 169
NcoI CCATGG 1 cut(s) 48
NdeII GATC 6 cut(s) 92, 96, 337, 379, 458, 910
NlaIII CATG 4 cut(s) 52, 430, 586, 871
NlaIV GGNNCC 2 cut(s) 118, 166
NmuCI GTSAC 2 cut(s) 371, 626
NspI RCATGY 1 cut(s) 430
NspV TTCGAA 1 cut(s) 59
OliI CACNNNNGTG 1 cut(s) 850
PaeR7I CTCGAG 2 cut(s) 88, 389
PdmI GAANNNNTTC 1 cut(s) 449
PfeI GAWTC 6 cut(s) 10, 44, 80, 611, 932, 1241
Pfl23II CGTACG 1 cut(s) 264
PflMI CCANNNNNTGG 1 cut(s) 1220
PinAI ACCGGT 1 cut(s) 123
Psp6I CCWGG 2 cut(s) 64, 75
PspGI CCWGG 2 cut(s) 64, 75
PspLI CGTACG 1 cut(s) 264
PspN4I GGNNCC 2 cut(s) 118, 166
PspPI GGNCC 1 cut(s) 398
PstI CTGCAG 2 cut(s) 895, 1237
PstNI CAGNNNCTG 1 cut(s) 880
PvuII CAGCTG 1 cut(s) 890
RsaI GTAC 6 cut(s) 176, 266, 301, 404, 416, 1082
RsaNI GTAC 6 cut(s) 175, 265, 300, 403, 415, 1081
RseI CAYNNNNRTG 2 cut(s) 850, 866
SaqAI TTAA 4 cut(s) 486, 660, 1014, 1029
Sau3AI GATC 6 cut(s) 92, 96, 337, 379, 458, 910
Sau96I GGNCC 1 cut(s) 398
ScrFI CCNGG 3 cut(s) 66, 77, 169
SduI GDGCHC 6 cut(s) 89, 316, 369, 771, 842, 857
SfaNI GCATC 3 cut(s) 886, 1006, 1096
SfcI CTRYAG 2 cut(s) 891, 1233
Sfr274I CTCGAG 2 cut(s) 88, 389
SfuI TTCGAA 1 cut(s) 59
SlaI CTCGAG 2 cut(s) 88, 389
SmiMI CAYNNNNRTG 2 cut(s) 850, 866
SmlI CTYRAG 5 cut(s) 88, 389, 485, 539, 1013
SmoI CTYRAG 5 cut(s) 88, 389, 485, 539, 1013
Sse9I AATT 7 cut(s) 55, 219, 446, 554, 920, 1031, 1153
SsiI CCGC 6 cut(s) 5, 204, 396, 1142, 1273, 1276
SspMI CTAG 6 cut(s) 467, 608, 908, 1091, 1158, 1205
StyD4I CCNGG 3 cut(s) 64, 75, 167
StyI CCWWGG 1 cut(s) 48
TaiI ACGT 4 cut(s) 194, 270, 332, 741
TaqI TCGA 8 cut(s) 59, 72, 89, 95, 321, 390, 913, 1049
TaqII GACCGA 1 cut(s) 678
TasI AATT 7 cut(s) 55, 219, 446, 554, 920, 1031, 1153
TatI WGTACW 1 cut(s) 414
TauI GCSGC 2 cut(s) 7, 1276
TfiI GAWTC 6 cut(s) 10, 44, 80, 611, 932, 1241
Tru1I TTAA 4 cut(s) 486, 660, 1014, 1029
Tru9I TTAA 4 cut(s) 486, 660, 1014, 1029
TscAI CASTG 5 cut(s) 355, 520, 571, 868, 972
TseFI GTSAC 2 cut(s) 371, 626
Tsp45I GTSAC 2 cut(s) 371, 626
TspDTI ATGAA 3 cut(s) 268, 666, 763
TspGWI ACGGA 4 cut(s) 317, 359, 821, 1035
TspRI CASTG 5 cut(s) 355, 520, 571, 868, 972
Van91I CCANNNNNTGG 1 cut(s) 1220
Vha464I CTTAAG 2 cut(s) 485, 1013
VneI GTGCAC 2 cut(s) 365, 853
XapI RAATTY 3 cut(s) 55, 446, 1031
XbaI TCTAGA 3 cut(s) 607, 907, 1090
XceI RCATGY 1 cut(s) 430
XhoI CTCGAG 2 cut(s) 88, 389
XmnI GAANNNNTTC 1 cut(s) 449
XspI CTAG 6 cut(s) 467, 608, 908, 1091, 1158, 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.