pycom07g19050

BTB POZ and MATH domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
21417598 .. 21421785
4188 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g19050.4

Sequence Viewer

Length: 1281 bp
ATGCCGCCGATTCGGAAACATTTCAGAGGGGCGAAATCGGGTGAATCCATGGGGAATTCGAAGCCTGGGTCCGACCATGAATCGTGCTCGAGATCGATCAGTGAGACTGTGAATGGCTCCCACCGGTTCACGATAAAGGGGTATTCGCTGGCCAAAGGTATGGGAGCTGGGAAGTACCTGACGAGCGATACGTTCACGGTGGGCGGATACGATTGGGCAATTTACTTTTACCCCGACGGTAAAAACCCCGAGGATAGCAACGCGTACGTCTCGGTTTTCATTGCTTTGGTTAGTGAGGGTACGGATGTGAGGGCTCTGTTCGAGCTGACGTTGGTGGATCAGACGGACAGTGGGAAGGACAAGGTGCACAGTCACTTTGATCGAGCTCTCGAGGGCGGGCCGTACACGCTGAAGTACAGAGGCAGCATGTGGGGTTACAAGAAATTCTTCAGAAGATCGATCCTAGAAACTTCTGAGTTCCTTAAGGATGATTGCCTTGTATTGAACTGCACTGTTGGAGTTGTCAGAACTCGCCTTGAGCAACCAAAACAATTTACAATCACTGTTCCATCATCAGACATGGGACGAGACCTAAAGGACTTTCTAGATTCTGAAGCTGGTTGTGACATAGTTTTTCAGGTTGGTGATGAACAGTTTAAAGCTCACAAGTTGATACTTGCTGCTCGGTCTCGTGTATTTAGAGCACAGTTTTATGGACTTGTTGGGGATTGTAATGTGGATAAAGTAGTTGTGAAGGATGTTGAGCCCTTCATCTTCAAGGCAATGCTTCTCTTTATTTACACGGACAAACTTCCTGATACACACGAAGTTATGGGCTCATCAACTTTGTGCACATTCACTGTCATGGTGCAGCATCTGTTGGCAGCTGCAGACCTGTATAATCTAGATCGACTGAAATTGTTGTGTGAATCAAAGTTATGTGAAGAAATCACTACTGAGACAGTGGCGACTACACTTGCGCTAGCTGAACAGCATCAATGCCGACAGCTTAAGGATGTCTGTCTTAAATTTACGGCAAATCCGTCGAACTTGGGAGCCGTAATGCAATCAGAAGGGTACAAGCATCTAGAGGAGAGCTGCCCATCAATGTTGGTAGAGCTGCTGGAGACGTTTGCAGCGGTGGATGACAATTCTAGTCTTCTGTCAAGTCGGAAGAGGAGTGGCAGCAGCATATATGGACTAGATTTGCCAGCAGATGGGGGTGGGACTGTAGCAGAATCAGCAAATCCCAATGGTAGGCGCGTGAGGCGGCGGTTTTAG

Protein Analysis

427

Amino Acids

47.26

Weight (kDa)

6.24

Isoelectric Point (pI)

37.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1217
AccII CGCG 2 cut(s) 263, 1263
AciI CCGC 6 cut(s) 5, 204, 396, 1139, 1270, 1273
AclWI GGATC 2 cut(s) 345, 454
AcoI YGGCCR 1 cut(s) 150
AcsI RAATTY 3 cut(s) 55, 443, 1028
AcuI CTGAAG 3 cut(s) 431, 433, 633
AfaI GTAC 6 cut(s) 176, 266, 301, 404, 416, 1079
AfiI CCNNNNNNNGG 2 cut(s) 1217, 1257
AflII CTTAAG 2 cut(s) 482, 1010
AflIII ACRYGT 1 cut(s) 261
AgeI ACCGGT 1 cut(s) 123
AgsI TTSAA 2 cut(s) 505, 778
AjnI CCWGG 1 cut(s) 64
Alw21I GWGCWC 5 cut(s) 89, 369, 388, 706, 854
Alw26I GTCTC 6 cut(s) 98, 274, 582, 693, 953, 1121
Alw44I GTGCAC 2 cut(s) 365, 850
AlwI GGATC 2 cut(s) 345, 454
AlwNI CAGNNNCTG 1 cut(s) 877
Ama87I CYCGRG 3 cut(s) 88, 248, 389
AoxI GGCC 2 cut(s) 150, 398
ApaLI GTGCAC 2 cut(s) 365, 850
ApoI RAATTY 3 cut(s) 55, 443, 1028
ArsI GACNNNNNNTTYG 2 cut(s) 53, 85
AsiGI ACCGGT 1 cut(s) 123
Asp700I GAANNNNTTC 2 cut(s) 20, 446
AspLEI GCGC 2 cut(s) 982, 1263
AspS9I GGNCC 2 cut(s) 69, 398
AsuHPI GGTGA 2 cut(s) 53, 656
AsuII TTCGAA 1 cut(s) 59
AsuNHI GCTAGC 1 cut(s) 982
AvaI CYCGRG 3 cut(s) 88, 248, 389
AvaII GGWCC 1 cut(s) 69
BaeGI GKGCMC 2 cut(s) 369, 854
BaeI ACNNNNGTAYC 2 cut(s) 291, 324
BalI TGGCCA 1 cut(s) 152
BanII GRGCYC 4 cut(s) 316, 388, 768, 839
BauI CACGAG 1 cut(s) 690
BbsI GAAGAC 1 cut(s) 1151
Bbv12I GWGCWC 5 cut(s) 89, 369, 388, 706, 854
BccI CCATC 3 cut(s) 577, 1111, 1211
BceAI ACGGC 3 cut(s) 385, 1043, 1050
BcgI CGANNNNNNTGC 2 cut(s) 1026, 1060
BciT130I CCWGG 1 cut(s) 66
BciVI GTATCC 1 cut(s) 200
BcoDI GTCTC 6 cut(s) 98, 274, 582, 693, 953, 1121
BfaI CTAG 7 cut(s) 464, 605, 905, 983, 1088, 1155, 1202
BfmI CTRYAG 2 cut(s) 888, 1230
BfrI CTTAAG 2 cut(s) 482, 1010
BfuI GTATCC 1 cut(s) 200
Bme1390I CCNGG 1 cut(s) 66
Bme18I GGWCC 1 cut(s) 69
BmeT110I CYCGRG 3 cut(s) 88, 248, 389
BmgT120I GGNCC 2 cut(s) 69, 398
BmiI GGNNCC 3 cut(s) 70, 118, 1057
BmrFI CCNGG 1 cut(s) 66
BmsI GCATC 3 cut(s) 883, 1003, 1093
BmtI GCTAGC 1 cut(s) 986
BpiI GAAGAC 1 cut(s) 1151
BpmI CTGGAG 1 cut(s) 1145
Bpu14I TTCGAA 1 cut(s) 59
BpuEI CTTGAG 1 cut(s) 557
Bsa29I ATCGAT 2 cut(s) 95, 458
BsaI GGTCTC 2 cut(s) 582, 693
BsaJI CCNNGG 3 cut(s) 48, 65, 249
BsaWI WCCGGW 1 cut(s) 123
Bsc4I CCNNNNNNNGG 2 cut(s) 1217, 1257
Bse118I RCCGGY 1 cut(s) 123
Bse3DI GCAATG 2 cut(s) 279, 789
BseBI CCWGG 1 cut(s) 66
BseCI ATCGAT 2 cut(s) 95, 458
BseDI CCNNGG 3 cut(s) 48, 65, 249
BseGI GGATG 5 cut(s) 310, 493, 763, 1021, 1150
BseLI CCNNNNNNNGG 2 cut(s) 1217, 1257
BseMI GCAATG 2 cut(s) 279, 789
BseMII CTCAG 2 cut(s) 465, 948
BseRI GAGGAG 2 cut(s) 1106, 1192
BseSI GKGCMC 2 cut(s) 369, 854
BseYI CCCAGC 1 cut(s) 167
BsgI GTGCAG 2 cut(s) 493, 890
Bsh1236I CGCG 2 cut(s) 263, 1263
BshFI GGCC 2 cut(s) 152, 400
BshTI ACCGGT 1 cut(s) 123
BshVI ATCGAT 2 cut(s) 95, 458
BsiHKAI GWGCWC 5 cut(s) 89, 369, 388, 706, 854
BsiHKCI CYCGRG 3 cut(s) 88, 248, 389
BsiSI CCGG 1 cut(s) 124
BsiWI CGTACG 1 cut(s) 264
BslFI GGGAC 2 cut(s) 597, 1240
BslI CCNNNNNNNGG 2 cut(s) 1217, 1257
BsmAI GTCTC 6 cut(s) 98, 274, 582, 693, 953, 1121
BsmBI CGTCTC 2 cut(s) 274, 1121
BsmFI GGGAC 2 cut(s) 597, 1240
BsnI GGCC 2 cut(s) 152, 400
Bso31I GGTCTC 2 cut(s) 582, 693
BsoBI CYCGRG 3 cut(s) 88, 248, 389
Bsp119I TTCGAA 1 cut(s) 59
Bsp1286I GDGCHC 8 cut(s) 89, 316, 369, 388, 706, 768, 839, 854
Bsp143I GATC 7 cut(s) 92, 96, 337, 379, 455, 459, 907
Bsp19I CCATGG 1 cut(s) 48
BspACI CCGC 6 cut(s) 5, 204, 396, 1139, 1270, 1273
BspANI GGCC 2 cut(s) 152, 400
BspCNI CTCAG 2 cut(s) 466, 949
BspDI ATCGAT 2 cut(s) 95, 458
BspFNI CGCG 2 cut(s) 263, 1263
BspLI GGNNCC 3 cut(s) 70, 118, 1057
BspMAI CTGCAG 1 cut(s) 892
BspOI GCTAGC 1 cut(s) 986
BspPI GGATC 2 cut(s) 345, 454
BspT104I TTCGAA 1 cut(s) 59
BspTI CTTAAG 2 cut(s) 482, 1010
BspTNI GGTCTC 2 cut(s) 582, 693
BsrDI GCAATG 2 cut(s) 279, 789
BsrFI RCCGGY 1 cut(s) 123
BssAI RCCGGY 1 cut(s) 123
BssECI CCNNGG 3 cut(s) 48, 65, 249
BssMI GATC 7 cut(s) 92, 96, 337, 379, 455, 459, 907
BssSI CACGAG 1 cut(s) 690
BssT1I CCWWGG 1 cut(s) 48
Bst2BI CACGAG 1 cut(s) 690
Bst2UI CCWGG 1 cut(s) 66
Bst6I CTCTTC 1 cut(s) 1169
BstAFI CTTAAG 2 cut(s) 482, 1010
BstBI TTCGAA 1 cut(s) 59
BstC8I GCNNGC 4 cut(s) 150, 398, 984, 1212
BstDEI CTNAG 2 cut(s) 474, 957
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 5 cut(s) 310, 493, 763, 1021, 1150
BstFNI CGCG 2 cut(s) 263, 1263
BstHHI GCGC 2 cut(s) 982, 1263
BstKTI GATC 7 cut(s) 95, 99, 340, 382, 458, 462, 910
BstMAI GTCTC 6 cut(s) 98, 274, 582, 693, 953, 1121
BstMBI GATC 7 cut(s) 92, 96, 337, 379, 455, 459, 907
BstMWI GCNNNNNNNGC 3 cut(s) 406, 1241, 1267
BstNI CCWGG 1 cut(s) 66
BstNSI RCATGY 1 cut(s) 430
BstSCI CCNGG 1 cut(s) 64
BstSFI CTRYAG 2 cut(s) 888, 1230
BstSLI GKGCMC 2 cut(s) 369, 854
BstUI CGCG 2 cut(s) 263, 1263
BstV2I GAAGAC 1 cut(s) 1151
BstXI CCANNNNNNTGG 1 cut(s) 160
Bsu15I ATCGAT 2 cut(s) 95, 458
BsuI GTATCC 1 cut(s) 200
BsuRI GGCC 2 cut(s) 152, 400
BsuTUI ATCGAT 2 cut(s) 95, 458
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 5 cut(s) 310, 493, 763, 1021, 1150
BtsIMutI CAGTG 6 cut(s) 106, 355, 510, 561, 858, 969
Cac8I GCNNGC 4 cut(s) 150, 398, 984, 1212
CaiI CAGNNNCTG 1 cut(s) 877
CfoI GCGC 2 cut(s) 982, 1263
Cfr10I RCCGGY 1 cut(s) 123
Cfr13I GGNCC 2 cut(s) 69, 398
ClaI ATCGAT 2 cut(s) 95, 458
Csp6I GTAC 6 cut(s) 175, 265, 300, 403, 415, 1078
CspAI ACCGGT 1 cut(s) 123
CviAII CATG 5 cut(s) 49, 77, 427, 580, 865
CviQI GTAC 6 cut(s) 175, 265, 300, 403, 415, 1078
DdeI CTNAG 2 cut(s) 474, 957
DpnI GATC 7 cut(s) 94, 98, 339, 381, 457, 461, 909
DpnII GATC 7 cut(s) 92, 96, 337, 379, 455, 459, 907
DraI TTTAAA 1 cut(s) 658
EaeI YGGCCR 1 cut(s) 150
Eam1104I CTCTTC 1 cut(s) 1169
EarI CTCTTC 1 cut(s) 1169
EciI GGCGGA 1 cut(s) 219
Ecl136II GAGCTC 1 cut(s) 386
Eco130I CCWWGG 1 cut(s) 48
Eco24I GRGCYC 4 cut(s) 316, 388, 768, 839
Eco31I GGTCTC 2 cut(s) 582, 693
Eco47I GGWCC 1 cut(s) 69
Eco53kI GAGCTC 1 cut(s) 386
Eco57I CTGAAG 3 cut(s) 431, 433, 633
Eco88I CYCGRG 3 cut(s) 88, 248, 389
EcoICRI GAGCTC 1 cut(s) 386
EcoRI GAATTC 1 cut(s) 55
EcoRII CCWGG 1 cut(s) 64
EcoT14I CCWWGG 1 cut(s) 48
EcoT38I GRGCYC 4 cut(s) 316, 388, 768, 839
ErhI CCWWGG 1 cut(s) 48
Esp3I CGTCTC 2 cut(s) 274, 1121
FaeI CATG 5 cut(s) 52, 80, 430, 583, 868
FalI AAGNNNNNCTT 2 cut(s) 431, 463
FaqI GGGAC 2 cut(s) 597, 1240
FatI CATG 5 cut(s) 48, 76, 426, 579, 864
FauI CCCGC 1 cut(s) 389
FokI GGATG 5 cut(s) 317, 500, 770, 1028, 1157
FriOI GRGCYC 4 cut(s) 316, 388, 768, 839
FspBI CTAG 7 cut(s) 464, 605, 905, 983, 1088, 1155, 1202
GlaI GCGC 2 cut(s) 981, 1262
GsaI CCCAGC 1 cut(s) 171
GsuI CTGGAG 1 cut(s) 1145
HaeIII GGCC 2 cut(s) 152, 400
HapII CCGG 1 cut(s) 124
HhaI GCGC 2 cut(s) 982, 1263
Hin1II CATG 5 cut(s) 52, 80, 430, 583, 868
Hin6I GCGC 2 cut(s) 980, 1261
HinP1I GCGC 2 cut(s) 980, 1261
HinfI GANTC 6 cut(s) 10, 44, 80, 608, 929, 1238
HpaII CCGG 1 cut(s) 124
HphI GGTGA 2 cut(s) 53, 656
Hpy166II GTNNAC 5 cut(s) 129, 195, 367, 405, 852
Hpy188III TCNNGA 7 cut(s) 90, 130, 389, 605, 815, 905, 1088
Hpy8I GTNNAC 5 cut(s) 129, 195, 367, 405, 852
Hpy99I CGWCG 2 cut(s) 239, 1048
HpyAV CCTTC 4 cut(s) 349, 748, 778, 1067
HpyCH4IV ACGT 4 cut(s) 191, 267, 329, 1130
HpyCH4V TGCA 7 cut(s) 367, 510, 852, 871, 890, 1066, 1136
HpyF10VI GCNNNNNNNGC 3 cut(s) 406, 1241, 1267
HpyF3I CTNAG 2 cut(s) 474, 957
HpySE526I ACGT 4 cut(s) 191, 267, 329, 1130
Hsp92II CATG 5 cut(s) 52, 80, 430, 583, 868
HspAI GCGC 2 cut(s) 980, 1261
Kzo9I GATC 7 cut(s) 92, 96, 337, 379, 455, 459, 907
LmnI GCTCC 3 cut(s) 122, 164, 1055
LweI GCATC 3 cut(s) 883, 1003, 1093
MaeI CTAG 7 cut(s) 464, 605, 905, 983, 1088, 1155, 1202
MaeII ACGT 4 cut(s) 191, 267, 329, 1130
MaeIII GTNAC 3 cut(s) 371, 434, 623
MalI GATC 7 cut(s) 94, 98, 339, 381, 457, 461, 909
MboI GATC 7 cut(s) 92, 96, 337, 379, 455, 459, 907
MboII GAAGA 6 cut(s) 439, 465, 766, 956, 1151, 1186
MhlI GDGCHC 8 cut(s) 89, 316, 369, 388, 706, 768, 839, 854
MlsI TGGCCA 1 cut(s) 152
MluCI AATT 7 cut(s) 55, 219, 443, 551, 917, 1028, 1150
MluI ACGCGT 1 cut(s) 261
MluNI TGGCCA 1 cut(s) 152
MmeI TCCRAC 3 cut(s) 96, 496, 1151
MnlI CCTC 9 cut(s) 20, 244, 289, 303, 385, 413, 1084, 1170, 1260
Mox20I TGGCCA 1 cut(s) 152
MroXI GAANNNNTTC 2 cut(s) 20, 446
MscI TGGCCA 1 cut(s) 152
MseI TTAA 4 cut(s) 483, 657, 1011, 1026
MslI CAYNNNNRTG 1 cut(s) 863
Msp20I TGGCCA 1 cut(s) 152
MspA1I CMGCKG 2 cut(s) 887, 1139
MspCI CTTAAG 2 cut(s) 482, 1010
MspI CCGG 1 cut(s) 124
MspR9I CCNGG 1 cut(s) 66
MvaI CCWGG 1 cut(s) 66
MvnI CGCG 2 cut(s) 263, 1263
MwoI GCNNNNNNNGC 3 cut(s) 406, 1241, 1267
NcoI CCATGG 1 cut(s) 48
NdeII GATC 7 cut(s) 92, 96, 337, 379, 455, 459, 907
NheI GCTAGC 1 cut(s) 982
NlaIII CATG 5 cut(s) 52, 80, 430, 583, 868
NlaIV GGNNCC 3 cut(s) 70, 118, 1057
NmuCI GTSAC 2 cut(s) 371, 623
NspI RCATGY 1 cut(s) 430
NspV TTCGAA 1 cut(s) 59
PaeR7I CTCGAG 2 cut(s) 88, 389
PcsI WCGNNNNNNNCGW 2 cut(s) 188, 1040
PdmI GAANNNNTTC 2 cut(s) 20, 446
PfeI GAWTC 6 cut(s) 10, 44, 80, 608, 929, 1238
Pfl23II CGTACG 1 cut(s) 264
PflMI CCANNNNNTGG 1 cut(s) 1217
PinAI ACCGGT 1 cut(s) 123
Psp124BI GAGCTC 1 cut(s) 388
Psp6I CCWGG 1 cut(s) 64
PspFI CCCAGC 1 cut(s) 167
PspGI CCWGG 1 cut(s) 64
PspLI CGTACG 1 cut(s) 264
PspN4I GGNNCC 3 cut(s) 70, 118, 1057
PspPI GGNCC 2 cut(s) 69, 398
PstI CTGCAG 1 cut(s) 892
PstNI CAGNNNCTG 1 cut(s) 877
PvuII CAGCTG 1 cut(s) 887
RsaI GTAC 6 cut(s) 176, 266, 301, 404, 416, 1079
RsaNI GTAC 6 cut(s) 175, 265, 300, 403, 415, 1078
RseI CAYNNNNRTG 1 cut(s) 863
SacI GAGCTC 1 cut(s) 388
SaqAI TTAA 4 cut(s) 483, 657, 1011, 1026
Sau3AI GATC 7 cut(s) 92, 96, 337, 379, 455, 459, 907
Sau96I GGNCC 2 cut(s) 69, 398
ScrFI CCNGG 1 cut(s) 66
SduI GDGCHC 8 cut(s) 89, 316, 369, 388, 706, 768, 839, 854
SfaNI GCATC 3 cut(s) 883, 1003, 1093
SfcI CTRYAG 2 cut(s) 888, 1230
Sfr274I CTCGAG 2 cut(s) 88, 389
SfuI TTCGAA 1 cut(s) 59
SinI GGWCC 1 cut(s) 69
SlaI CTCGAG 2 cut(s) 88, 389
SmiMI CAYNNNNRTG 1 cut(s) 863
SmlI CTYRAG 5 cut(s) 88, 389, 482, 536, 1010
SmoI CTYRAG 5 cut(s) 88, 389, 482, 536, 1010
Sse9I AATT 7 cut(s) 55, 219, 443, 551, 917, 1028, 1150
SsiI CCGC 6 cut(s) 5, 204, 396, 1139, 1270, 1273
SspMI CTAG 7 cut(s) 464, 605, 905, 983, 1088, 1155, 1202
SstI GAGCTC 1 cut(s) 388
StyD4I CCNGG 1 cut(s) 64
StyI CCWWGG 1 cut(s) 48
TaiI ACGT 4 cut(s) 194, 270, 332, 1133
TaqI TCGA 9 cut(s) 59, 89, 95, 321, 382, 390, 458, 910, 1046
TaqII GACCGA 1 cut(s) 675
TasI AATT 7 cut(s) 55, 219, 443, 551, 917, 1028, 1150
TatI WGTACW 1 cut(s) 414
TauI GCSGC 2 cut(s) 7, 1273
TfiI GAWTC 6 cut(s) 10, 44, 80, 608, 929, 1238
Tru1I TTAA 4 cut(s) 483, 657, 1011, 1026
Tru9I TTAA 4 cut(s) 483, 657, 1011, 1026
TscAI CASTG 6 cut(s) 106, 355, 517, 568, 865, 969
TseFI GTSAC 2 cut(s) 371, 623
Tsp45I GTSAC 2 cut(s) 371, 623
TspDTI ATGAA 4 cut(s) 93, 268, 663, 760
TspGWI ACGGA 4 cut(s) 317, 359, 818, 1032
TspRI CASTG 6 cut(s) 106, 355, 517, 568, 865, 969
Van91I CCANNNNNTGG 1 cut(s) 1217
Vha464I CTTAAG 2 cut(s) 482, 1010
VneI GTGCAC 2 cut(s) 365, 850
VpaK11BI GGWCC 1 cut(s) 69
XapI RAATTY 3 cut(s) 55, 443, 1028
XbaI TCTAGA 3 cut(s) 604, 904, 1087
XceI RCATGY 1 cut(s) 430
XhoI CTCGAG 2 cut(s) 88, 389
XmnI GAANNNNTTC 2 cut(s) 20, 446
XspI CTAG 7 cut(s) 464, 605, 905, 983, 1088, 1155, 1202
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.