Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0008710

Physical Location & Seq

Genomic Coordinates Forward (+)

30697033 .. 30701088

Gene Structure 4056 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1233000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGTGGGAGTAGCGTACGACTGTCTGGCGAACCCTCTCGGAGCGGTCCGGTCCACTTTCGAGAAGGCGATTGCTTCGGGATCCGACCCGGCCTCCTTCGACGGCCGGGACTGGGGAGCCGTCGATCTCTTCCGCAACTTCCTCTACGATGATGGCGGCCTCTCTCAGGTACCAATTTTGAATTCTGCAAGCATAAGATGGGTTCAGCCCAACACACTCGTTCGATTTCGAGGAATGATACAAGACATGTTGGGAAATGAATTCTATGTCGGTGCTTATAAGGATGGCTCTGTTTGGAGGACCAACAAGTTCACGGATGTTCCTCAATTCCCCGTGGATTCCACGCCGGATATGCGGTTATGGGAACGCCGTATGCTCTACTGCACCCCGGTGCCGGGACAGAATTCATGGGCCGAATCTTCTAACGCGGTGATGTATGCAAGTATGGAATCAGGAACCCAACAAAAAGAGAAGCGCCCGAGAGTGGATGCTGAAGCTACTGATAACATGGATTACGATGTCTCGGATAATGGGATTGAAGGTTCTCCTTCTACCAAAAAGCTGAAAGAAAATGGACATTCTACTCAGCAGTCAATTACTGAGGGCACCAGCTCTGGTATGATTATGGCACCTGATGTTAACAGTGGTTCACTTCCTTGTCTTATTAAGATTTACGATTGTTTAGAGTCTGACTTAAAGCTAAACGAGGTTTTTGAGTTTGTTGGAGTCTTCACTTTCGATTCAGAGTTTAAAGAGGACAAAGATGAATCAGATGATTTCACGAATGGTTTTAGTGAAGATGTGTTGGTTCACTTGCCCCCTAATAAGGTACCACGTCTCCACTGTTTTATTCACAGGAAACTTGCAGTTCACGACTTCCTTCCGTGTTCCCCTACAAACGAGCCAAAGCCGAACTTGGTGAAAGAGATCAGGGAAGCTCTCTTGAGGCATCTTACAGCTGTTCTTGGCAATGATGGTATAGCTGCTAATTTCATGCTGTTGCATCTCTTGTCCATGGTGTATTCAAGAGCTGGAACTGTTGCTGTGGGGAAGCTTTCACTAAATCTTACTTGTTTAAGCAGAGAAAGTGCGCCTGTGTTTGGCACCCAGCTTGGTCTTGCTCTCAAGAATCTTTTACCTTTCACACAATGCATATCCCTAACAGTGGATTATCTCAACACTGCTTCTCTTGCGCCAAGAAAGGATTATGAGACAAGCAGGCTGATAACCGGAGCCCTGCAGCTGGCTGAGGGTTCACACGTGATATTTGATGAGACCCGGCTGGAAGCTGGCATTCTTAACTCTGTCGGGGTTGAAAATGCAAGATTGCTTAAAACTTTAATAGAGTTGCAAAAGGTGGAATATGATTTCAAGTTCTATAAACTGGACATGCCAGCAGACATCCAAATGCTTGTTCTTTCGGAAGGCAAATCAAACATTTTGCCAGCTGATGTTGTGTTACCTTTCCACCCTTCTTCAGTGGCTTCCGCTGAAGTCACCACAGAAGCACTAGAGGCTTGGAGATGGTACTTGGCTACTCTTAGATCATTGCCACATTCTATTGACTCAGAATTACAGAAGGTGATAGAAAATGACTTGGTTGCAGCAAGGCAGGAAGATAGGACACTGGGAACCCAAGATTTCAGCAGATTGCTGACAATGGGTCGATTGATGTCGATGAGTTTTGGTGAAACCTCCCTATCATTAGAACACTGGCAGATGGTCAAGGAACTCGAGAGGTTACGAAGAGAGAGGCTCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0016043 GO:0022402 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MCM_bind

Protein Analysis

588

Amino Acids

65.54

Weight (kDa)

5.11

Isoelectric Point (pI)

42.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_bind	PF09739	44 - 586	5.6e-190	Mini-chromosome maintenance replisome factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40550
fragaria_vesca	FvH4_7g25850 FvH4_7g25850 FvH4_7g25850 FvH4_7g25850 FvH4_7g25850
malus_domestica	MD01G1166300.v1.1 MD01G1183300.v1.1 MD07G1233000.v1.1
prunus_persica	Prupe.2G263500_v2.0.a1 Prupe.2G263500_v2.0.a1
pyrus_communis	pycom01g17990 pycom07g21080
rosa_chinensis	RchiOBHm_Chr1g0372121
rosa_laevigata	RLG00000026921
rosa_multiflora	Rmu_sc0001755.1_g000024
rosa_roxburghii	Rroxscaffold_4G00285230
rosa_rugosa	Rorug01G0369900
rosa_samantha	Rh1AG378300 Rh1BG341600 Rh1CG355000 Rh1DG372700
rosa_wichuraiana	Rw1G033280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	279
Acc65I	GGTACC	2 cut(s)	169, 829
AccB1I	GGYRCC	6 cut(s)	169, 391, 605, 628, 829, 1103
AccBSI	CCGCTC	1 cut(s)	44
AccII	CGCG	1 cut(s)	428
AciI	CCGC	6 cut(s)	44, 133, 156, 355, 428, 1488
AclWI	GGATC	2 cut(s)	75, 88
AcoI	YGGCCR	1 cut(s)	103
AcsI	RAATTY	3 cut(s)	181, 260, 403
AcuI	CTGAAG	3 cut(s)	513, 1461, 1512
AcvI	CACGTG	1 cut(s)	1261
AfaI	GTAC	4 cut(s)	17, 171, 831, 1529
AfiI	CCNNNNNNNGG	9 cut(s)	112, 166, 394, 395, 484, 826, 1100, 1165, 1243
AflIII	ACRYGT	2 cut(s)	246, 1258
AgsI	TTSAA	5 cut(s)	181, 539, 1026, 1316, 1372
AhdI	GACNNNNNGTC	1 cut(s)	1662
AjiI	CACGTC	1 cut(s)	836
AjuI	GAANNNNNNNTTGG	4 cut(s)	166, 198, 1398, 1430
AleI	CACNNNNGTG	1 cut(s)	389
AloI	GAACNNNNNNTCC	2 cut(s)	526, 558
Alw26I	GTCTC	4 cut(s)	526, 842, 1205, 1268
AlwI	GGATC	2 cut(s)	75, 88
Ama87I	CYCGRG	2 cut(s)	478, 1733
AoxI	GGCC	4 cut(s)	90, 103, 157, 411
ApeKI	GCWGC	3 cut(s)	983, 1240, 1604
ApoI	RAATTY	3 cut(s)	181, 260, 403
Asp718I	GGTACC	2 cut(s)	169, 829
AspLEI	GCGC	3 cut(s)	477, 1093, 1195
AspS9I	GGNCC	4 cut(s)	46, 51, 300, 411
AsuC2I	CCSGG	5 cut(s)	89, 107, 389, 396, 1279
AsuHPI	GGTGA	5 cut(s)	442, 931, 1489, 1594, 1700
AvaI	CYCGRG	2 cut(s)	478, 1733
AvaII	GGWCC	3 cut(s)	46, 51, 300
BaeGI	GKGCMC	1 cut(s)	608
BamHI	GGATCC	1 cut(s)	80
BanI	GGYRCC	6 cut(s)	169, 391, 605, 628, 829, 1103
BanII	GRGCYC	1 cut(s)	1237
BbrPI	CACGTG	1 cut(s)	1261
BbsI	GAAGAC	1 cut(s)	721
BbvCI	CCTCAGC	1 cut(s)	1248
BbvI	GCAGC	3 cut(s)	970, 1252, 1616
BccI	CCATC	6 cut(s)	146, 192, 278, 968, 1518, 1714
BceAI	ACGGC	3 cut(s)	104, 118, 354
BcnI	CCSGG	5 cut(s)	89, 107, 389, 396, 1279
BcoDI	GTCTC	4 cut(s)	526, 842, 1205, 1268
BfaI	CTAG	1 cut(s)	1511
BfmI	CTRYAG	1 cut(s)	1238
BfoI	RGCGCY	1 cut(s)	478
BisI	GCNGC	4 cut(s)	157, 984, 1241, 1605
BlsI	GCNGC	4 cut(s)	158, 985, 1242, 1606
Bme1390I	CCNGG	5 cut(s)	89, 107, 389, 396, 1279
Bme18I	GGWCC	3 cut(s)	46, 51, 300
BmeRI	GACNNNNNGTC	1 cut(s)	1662
BmeT110I	CYCGRG	2 cut(s)	478, 1733
BmgBI	CACGTC	1 cut(s)	836
BmgT120I	GGNCC	4 cut(s)	46, 51, 300, 411
BmrFI	CCNGG	5 cut(s)	89, 107, 389, 396, 1279
BmrI	ACTGGG	2 cut(s)	121, 1637
BmsI	GCATC	3 cut(s)	478, 958, 1012
BmuI	ACTGGG	2 cut(s)	121, 1637
BpiI	GAAGAC	1 cut(s)	721
BplI	GAGNNNNNCTC	1 cut(s)	1740
Bpu10I	CCTNAGC	1 cut(s)	1248
BpuEI	CTTGAG	3 cut(s)	964, 1109, 1742
BpuMI	CCSGG	5 cut(s)	89, 107, 389, 396, 1279
BsaAI	YACGTR	1 cut(s)	1261
BsaI	GGTCTC	1 cut(s)	1268
BsaJI	CCNNGG	3 cut(s)	333, 387, 1014
BsaWI	WCCGGW	2 cut(s)	48, 1229
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 822, 852
Bsc4I	CCNNNNNNNGG	9 cut(s)	112, 166, 394, 395, 484, 826, 1100, 1165, 1243
Bse1I	ACTGG	4 cut(s)	116, 1389, 1632, 1718
Bse3DI	GCAATG	2 cut(s)	976, 1547
BseDI	CCNNGG	3 cut(s)	333, 387, 1014
BseGI	GGATG	4 cut(s)	289, 322, 493, 1401
BseLI	CCNNNNNNNGG	9 cut(s)	112, 166, 394, 395, 484, 826, 1100, 1165, 1243
BseMI	GCAATG	2 cut(s)	976, 1547
BseMII	CTCAG	5 cut(s)	179, 591, 599, 1239, 1581
BseNI	ACTGG	4 cut(s)	116, 1389, 1632, 1718
BseSI	GKGCMC	1 cut(s)	608
BseX3I	CGGCCG	1 cut(s)	103
BseXI	GCAGC	3 cut(s)	970, 1252, 1616
BseYI	CCCAGC	1 cut(s)	1107
BsgI	GTGCAG	1 cut(s)	367
Bsh1236I	CGCG	1 cut(s)	428
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	4 cut(s)	92, 105, 159, 413
BshNI	GGYRCC	6 cut(s)	169, 391, 605, 628, 829, 1103
BsiEI	CGRYCG	1 cut(s)	106
BsiHKCI	CYCGRG	2 cut(s)	478, 1733
BsiSI	CCGG	8 cut(s)	49, 89, 106, 347, 389, 395, 1230, 1279
BsiWI	CGTACG	1 cut(s)	15
BslFI	GGGAC	2 cut(s)	122, 411
BslI	CCNNNNNNNGG	9 cut(s)	112, 166, 394, 395, 484, 826, 1100, 1165, 1243
BsmAI	GTCTC	4 cut(s)	526, 842, 1205, 1268
BsmBI	CGTCTC	1 cut(s)	842
BsmFI	GGGAC	2 cut(s)	122, 411
BsmI	GAATGC	1 cut(s)	1293
BsnI	GGCC	4 cut(s)	92, 105, 159, 413
Bso31I	GGTCTC	1 cut(s)	1268
BsoBI	CYCGRG	2 cut(s)	478, 1733
Bsp1286I	GDGCHC	2 cut(s)	608, 1237
Bsp143I	GATC	4 cut(s)	80, 124, 927, 1544
Bsp19I	CCATGG	1 cut(s)	1014
BspACI	CCGC	6 cut(s)	44, 133, 156, 355, 428, 1488
BspANI	GGCC	4 cut(s)	92, 105, 159, 413
BspCNI	CTCAG	5 cut(s)	178, 592, 598, 1240, 1580
BspFNI	CGCG	1 cut(s)	428
BspMAI	CTGCAG	1 cut(s)	1242
BspPI	GGATC	2 cut(s)	75, 88
BspT107I	GGYRCC	6 cut(s)	169, 391, 605, 628, 829, 1103
BspTNI	GGTCTC	1 cut(s)	1268
BsrBI	CCGCTC	1 cut(s)	44
BsrDI	GCAATG	2 cut(s)	976, 1547
BsrI	ACTGG	4 cut(s)	116, 1389, 1632, 1718
BssECI	CCNNGG	3 cut(s)	333, 387, 1014
BssMI	GATC	4 cut(s)	80, 124, 927, 1544
BssT1I	CCWWGG	1 cut(s)	1014
Bst4CI	ACNGT	5 cut(s)	23, 644, 845, 1039, 1165
Bst6I	CTCTTC	2 cut(s)	134, 1741
BstBAI	YACGTR	1 cut(s)	1261
BstC8I	GCNNGC	6 cut(s)	190, 1220, 1245, 1291, 1395, 1446
BstDEI	CTNAG	6 cut(s)	165, 585, 600, 1248, 1541, 1567
BstDSI	CCRYGG	2 cut(s)	333, 1014
BstENI	CCTNNNNNAGG	1 cut(s)	164
BstF5I	GGATG	4 cut(s)	289, 322, 493, 1401
BstFNI	CGCG	1 cut(s)	428
BstH2I	RGCGCY	1 cut(s)	478
BstHHI	GCGC	3 cut(s)	477, 1093, 1195
BstKTI	GATC	4 cut(s)	83, 127, 930, 1547
BstMAI	GTCTC	4 cut(s)	526, 842, 1205, 1268
BstMBI	GATC	4 cut(s)	80, 124, 927, 1544
BstMCI	CGRYCG	1 cut(s)	106
BstMWI	GCNNNNNNNGC	3 cut(s)	352, 1190, 1514
BstNSI	RCATGY	2 cut(s)	250, 1393
BstSCI	CCNGG	5 cut(s)	87, 105, 387, 394, 1277
BstSFI	CTRYAG	1 cut(s)	1238
BstSLI	GKGCMC	1 cut(s)	608
BstUI	CGCG	1 cut(s)	428
BstV1I	GCAGC	3 cut(s)	970, 1252, 1616
BstV2I	GAAGAC	1 cut(s)	721
BstX2I	RGATCY	1 cut(s)	80
BstYI	RGATCY	1 cut(s)	80
BstZI	CGGCCG	1 cut(s)	103
BsuRI	GGCC	4 cut(s)	92, 105, 159, 413
BtgI	CCRYGG	2 cut(s)	333, 1014
BtrI	CACGTC	1 cut(s)	836
BtsCI	GGATG	4 cut(s)	289, 322, 493, 1401
BtsI	GCAGTG	1 cut(s)	1179
BtsIMutI	CAGTG	7 cut(s)	649, 841, 1170, 1179, 1485, 1625, 1711
Cac8I	GCNNGC	6 cut(s)	190, 1220, 1245, 1291, 1395, 1446
CfoI	GCGC	3 cut(s)	477, 1093, 1195
Cfr13I	GGNCC	4 cut(s)	46, 51, 300, 411
CpoI	CGGWCCG	1 cut(s)	46
Csp6I	GTAC	4 cut(s)	16, 170, 830, 1528
CspI	CGGWCCG	1 cut(s)	46
CviAII	CATG	6 cut(s)	247, 408, 508, 994, 1015, 1390
CviQI	GTAC	4 cut(s)	16, 170, 830, 1528
DdeI	CTNAG	6 cut(s)	165, 585, 600, 1248, 1541, 1567
DpnI	GATC	4 cut(s)	82, 126, 929, 1546
DpnII	GATC	4 cut(s)	80, 124, 927, 1544
DraI	TTTAAA	1 cut(s)	751
DriI	GACNNNNNGTC	1 cut(s)	1662
EaeI	YGGCCR	1 cut(s)	103
EagI	CGGCCG	1 cut(s)	103
Eam1104I	CTCTTC	2 cut(s)	134, 1741
Eam1105I	GACNNNNNGTC	1 cut(s)	1662
EarI	CTCTTC	2 cut(s)	134, 1741
EclXI	CGGCCG	1 cut(s)	103
Eco130I	CCWWGG	1 cut(s)	1014
Eco24I	GRGCYC	1 cut(s)	1237
Eco31I	GGTCTC	1 cut(s)	1268
Eco47I	GGWCC	3 cut(s)	46, 51, 300
Eco52I	CGGCCG	1 cut(s)	103
Eco57I	CTGAAG	3 cut(s)	513, 1461, 1512
Eco72I	CACGTG	1 cut(s)	1261
Eco88I	CYCGRG	2 cut(s)	478, 1733
EcoNI	CCTNNNNNAGG	1 cut(s)	164
EcoRI	GAATTC	3 cut(s)	181, 260, 403
EcoT14I	CCWWGG	1 cut(s)	1014
EcoT22I	ATGCAT	1 cut(s)	1154
EcoT38I	GRGCYC	1 cut(s)	1237
ErhI	CCWWGG	1 cut(s)	1014
Esp3I	CGTCTC	1 cut(s)	842
FaeI	CATG	6 cut(s)	250, 411, 511, 997, 1018, 1393
FalI	AAGNNNNNCTT	2 cut(s)	899, 931
FaqI	GGGAC	2 cut(s)	122, 411
FatI	CATG	6 cut(s)	246, 407, 507, 993, 1014, 1389
Fnu4HI	GCNGC	4 cut(s)	157, 984, 1241, 1605
FokI	GGATG	4 cut(s)	296, 329, 500, 1388
FriOI	GRGCYC	1 cut(s)	1237
Fsp4HI	GCNGC	4 cut(s)	157, 984, 1241, 1605
FspBI	CTAG	1 cut(s)	1511
GlaI	GCGC	3 cut(s)	476, 1092, 1194
GluI	GCNGC	4 cut(s)	157, 984, 1241, 1605
GsaI	CCCAGC	1 cut(s)	1111
HaeII	RGCGCY	1 cut(s)	478
HaeIII	GGCC	4 cut(s)	92, 105, 159, 413
HapII	CCGG	8 cut(s)	49, 89, 106, 347, 389, 395, 1230, 1279
HhaI	GCGC	3 cut(s)	477, 1093, 1195
Hin1II	CATG	6 cut(s)	250, 411, 511, 997, 1018, 1393
Hin6I	GCGC	3 cut(s)	475, 1091, 1193
HinP1I	GCGC	3 cut(s)	475, 1091, 1193
HincII	GTYRAC	1 cut(s)	640
HindII	GTYRAC	1 cut(s)	640
HindIII	AAGCTT	1 cut(s)	1052
HinfI	GANTC	9 cut(s)	338, 416, 449, 686, 726, 740, 767, 1129, 1565
HpaI	GTTAAC	1 cut(s)	640
HpaII	CCGG	8 cut(s)	49, 89, 106, 347, 389, 395, 1230, 1279
HphI	GGTGA	5 cut(s)	442, 931, 1489, 1594, 1700
Hpy166II	GTNNAC	7 cut(s)	54, 312, 640, 650, 811, 871, 1256
Hpy188I	TCNGA	8 cut(s)	41, 85, 526, 691, 745, 772, 1423, 1570
Hpy188III	TCNNGA	9 cut(s)	61, 78, 453, 781, 872, 943, 1026, 1126, 1735
Hpy8I	GTNNAC	7 cut(s)	54, 312, 640, 650, 811, 871, 1256
Hpy99I	CGWCG	2 cut(s)	104, 125
HpyAV	CCTTC	8 cut(s)	58, 106, 533, 558, 890, 1418, 1482, 1573
HpyCH4III	ACNGT	5 cut(s)	23, 644, 845, 1039, 1165
HpyCH4IV	ACGT	2 cut(s)	835, 1260
HpyF10VI	GCNNNNNNNGC	3 cut(s)	352, 1190, 1514
HpyF3I	CTNAG	6 cut(s)	165, 585, 600, 1248, 1541, 1567
HpySE526I	ACGT	2 cut(s)	835, 1260
Hsp92II	CATG	6 cut(s)	250, 411, 511, 997, 1018, 1393
HspAI	GCGC	3 cut(s)	475, 1091, 1193
KpnI	GGTACC	2 cut(s)	173, 833
KspAI	GTTAAC	1 cut(s)	640
Kzo9I	GATC	4 cut(s)	80, 124, 927, 1544
LmnI	GCTCC	3 cut(s)	41, 116, 1232
Lsp1109I	GCAGC	3 cut(s)	970, 1252, 1616
LweI	GCATC	3 cut(s)	478, 958, 1012
MaeI	CTAG	1 cut(s)	1511
MaeII	ACGT	2 cut(s)	835, 1260
MaeIII	GTNAC	3 cut(s)	1458, 1495, 1740
MalI	GATC	4 cut(s)	82, 126, 929, 1546
MbiI	CCGCTC	1 cut(s)	44
MboI	GATC	4 cut(s)	80, 124, 927, 1544
MboII	GAAGA	7 cut(s)	121, 411, 721, 809, 1467, 1628, 1758
MflI	RGATCY	1 cut(s)	80
MhlI	GDGCHC	2 cut(s)	608, 1237
MluCI	AATT	8 cut(s)	174, 181, 260, 326, 403, 594, 988, 1571
MlyI	GAGTC	3 cut(s)	695, 735, 1559
MmeI	TCCRAC	2 cut(s)	108, 703
Mph1103I	ATGCAT	1 cut(s)	1154
MseI	TTAA	8 cut(s)	639, 666, 695, 750, 1076, 1299, 1332, 1340
MslI	CAYNNNNRTG	2 cut(s)	389, 1406
MspA1I	CMGCKG	4 cut(s)	959, 1243, 1448, 1490
MspI	CCGG	8 cut(s)	49, 89, 106, 347, 389, 395, 1230, 1279
MspR9I	CCNGG	5 cut(s)	89, 107, 389, 396, 1279
Mva1269I	GAATGC	1 cut(s)	1293
MvnI	CGCG	1 cut(s)	428
MwoI	GCNNNNNNNGC	3 cut(s)	352, 1190, 1514
NciI	CCSGG	5 cut(s)	89, 107, 389, 396, 1279
NcoI	CCATGG	1 cut(s)	1014
NdeII	GATC	4 cut(s)	80, 124, 927, 1544
NlaIII	CATG	6 cut(s)	250, 411, 511, 997, 1018, 1393
NmuCI	GTSAC	1 cut(s)	1495
NsiI	ATGCAT	1 cut(s)	1154
NspI	RCATGY	2 cut(s)	250, 1393
OliI	CACNNNNGTG	1 cut(s)	389
PaeR7I	CTCGAG	1 cut(s)	1733
PciI	ACATGT	1 cut(s)	246
PctI	GAATGC	1 cut(s)	1293
PfeI	GAWTC	6 cut(s)	338, 416, 449, 740, 767, 1129
Pfl23II	CGTACG	1 cut(s)	15
PkrI	GCNGC	4 cut(s)	158, 985, 1242, 1606
PleI	GAGTC	3 cut(s)	694, 734, 1559
PmaCI	CACGTG	1 cut(s)	1261
PmlI	CACGTG	1 cut(s)	1261
PpsI	GAGTC	3 cut(s)	694, 734, 1559
Ppu21I	YACGTR	1 cut(s)	1261
PscI	ACATGT	1 cut(s)	246
PsiI	TTATAA	1 cut(s)	279
PspCI	CACGTG	1 cut(s)	1261
PspFI	CCCAGC	1 cut(s)	1107
PspLI	CGTACG	1 cut(s)	15
PspPI	GGNCC	4 cut(s)	46, 51, 300, 411
PstI	CTGCAG	1 cut(s)	1242
PsuI	RGATCY	1 cut(s)	80
PvuII	CAGCTG	3 cut(s)	959, 1243, 1448
RsaI	GTAC	4 cut(s)	17, 171, 831, 1529
RsaNI	GTAC	4 cut(s)	16, 170, 830, 1528
RseI	CAYNNNNRTG	2 cut(s)	389, 1406
Rsr2I	CGGWCCG	1 cut(s)	46
RsrII	CGGWCCG	1 cut(s)	46
SaqAI	TTAA	8 cut(s)	639, 666, 695, 750, 1076, 1299, 1332, 1340
SatI	GCNGC	4 cut(s)	157, 984, 1241, 1605
Sau3AI	GATC	4 cut(s)	80, 124, 927, 1544
Sau96I	GGNCC	4 cut(s)	46, 51, 300, 411
SchI	GAGTC	3 cut(s)	695, 735, 1559
ScrFI	CCNGG	5 cut(s)	89, 107, 389, 396, 1279
SduI	GDGCHC	2 cut(s)	608, 1237
SfaNI	GCATC	3 cut(s)	478, 958, 1012
SfcI	CTRYAG	1 cut(s)	1238
Sfr274I	CTCGAG	1 cut(s)	1733
SinI	GGWCC	3 cut(s)	46, 51, 300
SlaI	CTCGAG	1 cut(s)	1733
SmiMI	CAYNNNNRTG	2 cut(s)	389, 1406
SmlI	CTYRAG	4 cut(s)	943, 1124, 1733, 1757
SmoI	CTYRAG	4 cut(s)	943, 1124, 1733, 1757
Sse9I	AATT	8 cut(s)	174, 181, 260, 326, 403, 594, 988, 1571
SsiI	CCGC	6 cut(s)	44, 133, 156, 355, 428, 1488
SspMI	CTAG	1 cut(s)	1511
StyD4I	CCNGG	5 cut(s)	87, 105, 387, 394, 1277
StyI	CCWWGG	1 cut(s)	1014
TaaI	ACNGT	5 cut(s)	23, 644, 845, 1039, 1165
TaiI	ACGT	2 cut(s)	838, 1263
TaqI	TCGA	9 cut(s)	60, 99, 123, 223, 229, 738, 1666, 1676, 1734
TasI	AATT	8 cut(s)	174, 181, 260, 326, 403, 594, 988, 1571
TauI	GCSGC	1 cut(s)	159
TfiI	GAWTC	6 cut(s)	338, 416, 449, 740, 767, 1129
Tru1I	TTAA	8 cut(s)	639, 666, 695, 750, 1076, 1299, 1332, 1340
Tru9I	TTAA	8 cut(s)	639, 666, 695, 750, 1076, 1299, 1332, 1340
TscAI	CASTG	7 cut(s)	649, 848, 1170, 1186, 1485, 1632, 1718
TseFI	GTSAC	1 cut(s)	1495
TseI	GCWGC	3 cut(s)	983, 1240, 1604
Tsp45I	GTSAC	1 cut(s)	1495
TspDTI	ATGAA	4 cut(s)	273, 396, 780, 982
TspGWI	ACGGA	2 cut(s)	329, 873
TspRI	CASTG	7 cut(s)	649, 848, 1170, 1186, 1485, 1632, 1718
VpaK11BI	GGWCC	3 cut(s)	46, 51, 300
XagI	CCTNNNNNAGG	1 cut(s)	164
XapI	RAATTY	3 cut(s)	181, 260, 403
XceI	RCATGY	2 cut(s)	250, 1393
XhoI	CTCGAG	1 cut(s)	1733
XspI	CTAG	1 cut(s)	1511
Zsp2I	ATGCAT	1 cut(s)	1154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.