Mini-chromosome maintenance complex-binding
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40550 |
| fragaria_vesca | FvH4_7g25850 FvH4_7g25850 FvH4_7g25850 FvH4_7g25850 FvH4_7g25850 |
| malus_domestica | MD01G1166300.v1.1 MD01G1183300.v1.1 MD07G1233000.v1.1 |
| prunus_persica | Prupe.2G263500_v2.0.a1 Prupe.2G263500_v2.0.a1 |
| pyrus_communis | pycom01g17990 pycom07g21080 |
| rosa_chinensis | RchiOBHm_Chr1g0372121 |
| rosa_laevigata | RLG00000026921 |
| rosa_multiflora | Rmu_sc0001755.1_g000024 |
| rosa_roxburghii | Rroxscaffold_4G00285230 |
| rosa_rugosa | Rorug01G0369900 |
| rosa_samantha | Rh1AG378300 Rh1BG341600 Rh1CG355000 Rh1DG372700 |
| rosa_wichuraiana | Rw1G033280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 279 |
| Acc65I | GGTACC | 1 cut(s) | 832 |
| AccB1I | GGYRCC | 6 cut(s) | 116, 169, 391, 608, 832, 1634 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 487 |
| AccII | CGCG | 1 cut(s) | 74 |
| AciI | CCGC | 2 cut(s) | 90, 1112 |
| AclWI | GGATC | 2 cut(s) | 88, 737 |
| AcoI | YGGCCR | 1 cut(s) | 103 |
| AcsI | RAATTY | 3 cut(s) | 181, 403, 451 |
| AcuI | CTGAAG | 5 cut(s) | 447, 566, 1446, 1464, 1515 |
| AcyI | GRCGYC | 1 cut(s) | 117 |
| AfaI | GTAC | 4 cut(s) | 17, 834, 1095, 1532 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 112, 395, 487, 829, 901, 1103 |
| AflIII | ACRYGT | 1 cut(s) | 246 |
| AgsI | TTSAA | 5 cut(s) | 497, 542, 754, 1037, 1319 |
| AjiI | CACGTC | 1 cut(s) | 839 |
| AjnI | CCWGG | 2 cut(s) | 394, 1119 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 166, 198 |
| AleI | CACNNNNGTG | 1 cut(s) | 167 |
| Alw21I | GWGCWC | 1 cut(s) | 1240 |
| Alw26I | GTCTC | 6 cut(s) | 164, 529, 591, 845, 1208, 1271 |
| AlwI | GGATC | 2 cut(s) | 88, 737 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 692 |
| AoxI | GGCC | 4 cut(s) | 66, 103, 632, 1666 |
| ApeKI | GCWGC | 4 cut(s) | 986, 1397, 1502, 1607 |
| ApoI | RAATTY | 3 cut(s) | 181, 403, 451 |
| Asp718I | GGTACC | 1 cut(s) | 832 |
| AspLEI | GCGC | 3 cut(s) | 119, 369, 480 |
| AspS9I | GGNCC | 3 cut(s) | 85, 632, 1666 |
| AsuC2I | CCSGG | 2 cut(s) | 107, 389 |
| AsuHPI | GGTGA | 3 cut(s) | 336, 1597, 1703 |
| AvaII | GGWCC | 1 cut(s) | 85 |
| BaeGI | GKGCMC | 1 cut(s) | 611 |
| BanI | GGYRCC | 6 cut(s) | 116, 169, 391, 608, 832, 1634 |
| BanII | GRGCYC | 1 cut(s) | 1240 |
| BbsI | GAAGAC | 1 cut(s) | 724 |
| Bbv12I | GWGCWC | 1 cut(s) | 1240 |
| BbvCI | CCTCAGC | 1 cut(s) | 1251 |
| BbvI | GCAGC | 4 cut(s) | 973, 1409, 1489, 1619 |
| BccI | CCATC | 8 cut(s) | 77, 149, 192, 278, 566, 971, 1521, 1717 |
| BceAI | ACGGC | 5 cut(s) | 29, 104, 118, 354, 1653 |
| BciT130I | CCWGG | 2 cut(s) | 396, 1121 |
| BciVI | GTATCC | 1 cut(s) | 331 |
| BcnI | CCSGG | 2 cut(s) | 107, 389 |
| BcoDI | GTCTC | 6 cut(s) | 164, 529, 591, 845, 1208, 1271 |
| BfaI | CTAG | 3 cut(s) | 618, 1029, 1514 |
| BfmI | CTRYAG | 3 cut(s) | 897, 1241, 1503 |
| BfoI | RGCGCY | 3 cut(s) | 120, 370, 481 |
| BfuI | GTATCC | 1 cut(s) | 331 |
| BisI | GCNGC | 4 cut(s) | 987, 1398, 1503, 1608 |
| BlsI | GCNGC | 4 cut(s) | 988, 1399, 1504, 1609 |
| Bme1390I | CCNGG | 4 cut(s) | 107, 389, 396, 1121 |
| Bme18I | GGWCC | 1 cut(s) | 85 |
| BmgBI | CACGTC | 1 cut(s) | 839 |
| BmgT120I | GGNCC | 3 cut(s) | 85, 632, 1666 |
| BmrFI | CCNGG | 4 cut(s) | 107, 389, 396, 1121 |
| BmrI | ACTGGG | 1 cut(s) | 121 |
| BmsI | GCATC | 1 cut(s) | 393 |
| BmuI | ACTGGG | 1 cut(s) | 121 |
| BoxI | GACNNNNGTC | 1 cut(s) | 156 |
| BpiI | GAAGAC | 1 cut(s) | 724 |
| BpmI | CTGGAG | 1 cut(s) | 1254 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1251 |
| BpuEI | CTTGAG | 1 cut(s) | 1745 |
| BpuMI | CCSGG | 2 cut(s) | 107, 389 |
| BsaBI | GATNNNNATC | 1 cut(s) | 576 |
| BsaHI | GRCGYC | 1 cut(s) | 117 |
| BsaI | GGTCTC | 2 cut(s) | 164, 1271 |
| BsaJI | CCNNGG | 1 cut(s) | 1017 |
| BsaWI | WCCGGW | 1 cut(s) | 346 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 77, 107, 403, 433, 825, 855 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 112, 395, 487, 829, 901, 1103 |
| Bse1I | ACTGG | 4 cut(s) | 116, 1237, 1392, 1740 |
| Bse3DI | GCAATG | 2 cut(s) | 526, 1550 |
| Bse8I | GATNNNNATC | 1 cut(s) | 576 |
| BseBI | CCWGG | 2 cut(s) | 396, 1121 |
| BseDI | CCNNGG | 1 cut(s) | 1017 |
| BseGI | GGATG | 6 cut(s) | 289, 322, 384, 496, 577, 772 |
| BseJI | GATNNNNATC | 1 cut(s) | 576 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 112, 395, 487, 829, 901, 1103 |
| BseMI | GCAATG | 2 cut(s) | 526, 1550 |
| BseMII | CTCAG | 6 cut(s) | 179, 338, 540, 594, 602, 1242 |
| BseNI | ACTGG | 4 cut(s) | 116, 1237, 1392, 1740 |
| BseSI | GKGCMC | 1 cut(s) | 611 |
| BseX3I | CGGCCG | 1 cut(s) | 103 |
| BseXI | GCAGC | 4 cut(s) | 973, 1409, 1489, 1619 |
| Bsh1236I | CGCG | 1 cut(s) | 74 |
| Bsh1285I | CGRYCG | 2 cut(s) | 53, 106 |
| BshFI | GGCC | 4 cut(s) | 68, 105, 634, 1668 |
| BshNI | GGYRCC | 6 cut(s) | 116, 169, 391, 608, 832, 1634 |
| BsiEI | CGRYCG | 2 cut(s) | 53, 106 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1240 |
| BsiSI | CCGG | 4 cut(s) | 106, 347, 389, 1571 |
| BsiWI | CGTACG | 1 cut(s) | 15 |
| BslFI | GGGAC | 2 cut(s) | 122, 963 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 112, 395, 487, 829, 901, 1103 |
| BsmAI | GTCTC | 6 cut(s) | 164, 529, 591, 845, 1208, 1271 |
| BsmBI | CGTCTC | 1 cut(s) | 845 |
| BsmFI | GGGAC | 2 cut(s) | 122, 963 |
| BsmI | GAATGC | 1 cut(s) | 548 |
| BsnI | GGCC | 4 cut(s) | 68, 105, 634, 1668 |
| Bso31I | GGTCTC | 2 cut(s) | 164, 1271 |
| Bsp1286I | GDGCHC | 2 cut(s) | 611, 1240 |
| Bsp143I | GATC | 7 cut(s) | 50, 80, 124, 742, 930, 1266, 1547 |
| BspACI | CCGC | 2 cut(s) | 90, 1112 |
| BspANI | GGCC | 4 cut(s) | 68, 105, 634, 1668 |
| BspCNI | CTCAG | 6 cut(s) | 178, 337, 539, 595, 601, 1243 |
| BspFNI | CGCG | 1 cut(s) | 74 |
| BspHI | TCATGA | 1 cut(s) | 874 |
| BspMAI | CTGCAG | 1 cut(s) | 1507 |
| BspPI | GGATC | 2 cut(s) | 88, 737 |
| BspT107I | GGYRCC | 6 cut(s) | 116, 169, 391, 608, 832, 1634 |
| BspTNI | GGTCTC | 2 cut(s) | 164, 1271 |
| BsrDI | GCAATG | 2 cut(s) | 526, 1550 |
| BsrI | ACTGG | 4 cut(s) | 116, 1237, 1392, 1740 |
| BssECI | CCNNGG | 1 cut(s) | 1017 |
| BssMI | GATC | 7 cut(s) | 50, 80, 124, 742, 930, 1266, 1547 |
| BssNI | GRCGYC | 1 cut(s) | 117 |
| Bst2UI | CCWGG | 2 cut(s) | 396, 1121 |
| Bst4CI | ACNGT | 5 cut(s) | 848, 901, 1021, 1042, 1168 |
| Bst6I | CTCTTC | 2 cut(s) | 134, 149 |
| BstACI | GRCGYC | 1 cut(s) | 117 |
| BstC8I | GCNNGC | 2 cut(s) | 1248, 1449 |
| BstDEI | CTNAG | 7 cut(s) | 165, 324, 526, 588, 603, 1251, 1544 |
| BstDSI | CCRYGG | 1 cut(s) | 1017 |
| BstF5I | GGATG | 6 cut(s) | 289, 322, 384, 496, 577, 772 |
| BstFNI | CGCG | 1 cut(s) | 74 |
| BstH2I | RGCGCY | 3 cut(s) | 120, 370, 481 |
| BstHHI | GCGC | 3 cut(s) | 119, 369, 480 |
| BstKTI | GATC | 7 cut(s) | 53, 83, 127, 745, 933, 1269, 1550 |
| BstMAI | GTCTC | 6 cut(s) | 164, 529, 591, 845, 1208, 1271 |
| BstMBI | GATC | 7 cut(s) | 50, 80, 124, 742, 930, 1266, 1547 |
| BstMCI | CGRYCG | 2 cut(s) | 53, 106 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 373, 1193, 1508, 1517, 1576 |
| BstNI | CCWGG | 2 cut(s) | 396, 1121 |
| BstNSI | RCATGY | 2 cut(s) | 250, 355 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 156 |
| BstSCI | CCNGG | 4 cut(s) | 105, 387, 394, 1119 |
| BstSFI | CTRYAG | 3 cut(s) | 897, 1241, 1503 |
| BstSLI | GKGCMC | 1 cut(s) | 611 |
| BstUI | CGCG | 1 cut(s) | 74 |
| BstV1I | GCAGC | 4 cut(s) | 973, 1409, 1489, 1619 |
| BstV2I | GAAGAC | 1 cut(s) | 724 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 217 |
| BstZI | CGGCCG | 1 cut(s) | 103 |
| BsuI | GTATCC | 1 cut(s) | 331 |
| BsuRI | GGCC | 4 cut(s) | 68, 105, 634, 1668 |
| BtgI | CCRYGG | 1 cut(s) | 1017 |
| BtgZI | GCGATG | 1 cut(s) | 55 |
| BtrI | CACGTC | 1 cut(s) | 839 |
| BtsCI | GGATG | 6 cut(s) | 289, 322, 384, 496, 577, 772 |
| BtsI | GCAGTG | 2 cut(s) | 438, 1182 |
| BtsIMutI | CAGTG | 6 cut(s) | 438, 802, 844, 906, 1061, 1182 |
| Cac8I | GCNNGC | 2 cut(s) | 1248, 1449 |
| CaiI | CAGNNNCTG | 1 cut(s) | 692 |
| CciI | TCATGA | 1 cut(s) | 874 |
| CfoI | GCGC | 3 cut(s) | 119, 369, 480 |
| Cfr13I | GGNCC | 3 cut(s) | 85, 632, 1666 |
| CseI | GACGC | 1 cut(s) | 63 |
| Csp6I | GTAC | 4 cut(s) | 16, 833, 1094, 1531 |
| CviAII | CATG | 7 cut(s) | 247, 352, 408, 511, 875, 997, 1393 |
| CviQI | GTAC | 4 cut(s) | 16, 833, 1094, 1531 |
| DdeI | CTNAG | 7 cut(s) | 165, 324, 526, 588, 603, 1251, 1544 |
| DinI | GGCGCC | 1 cut(s) | 118 |
| DpnI | GATC | 7 cut(s) | 52, 82, 126, 744, 932, 1268, 1549 |
| DpnII | GATC | 7 cut(s) | 50, 80, 124, 742, 930, 1266, 1547 |
| EaeI | YGGCCR | 1 cut(s) | 103 |
| EagI | CGGCCG | 1 cut(s) | 103 |
| Eam1104I | CTCTTC | 2 cut(s) | 134, 149 |
| EarI | CTCTTC | 2 cut(s) | 134, 149 |
| Ecl136II | GAGCTC | 1 cut(s) | 1238 |
| EclXI | CGGCCG | 1 cut(s) | 103 |
| Eco24I | GRGCYC | 1 cut(s) | 1240 |
| Eco31I | GGTCTC | 2 cut(s) | 164, 1271 |
| Eco47I | GGWCC | 1 cut(s) | 85 |
| Eco52I | CGGCCG | 1 cut(s) | 103 |
| Eco53kI | GAGCTC | 1 cut(s) | 1238 |
| Eco57I | CTGAAG | 5 cut(s) | 447, 566, 1446, 1464, 1515 |
| EcoICRI | GAGCTC | 1 cut(s) | 1238 |
| EcoO109I | RGGNCCY | 1 cut(s) | 632 |
| EcoRI | GAATTC | 3 cut(s) | 181, 403, 451 |
| EcoRII | CCWGG | 2 cut(s) | 394, 1119 |
| EcoT38I | GRGCYC | 1 cut(s) | 1240 |
| EgeI | GGCGCC | 1 cut(s) | 118 |
| EheI | GGCGCC | 1 cut(s) | 118 |
| Esp3I | CGTCTC | 1 cut(s) | 845 |
| FaeI | CATG | 7 cut(s) | 250, 355, 411, 514, 878, 1000, 1396 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 902, 934 |
| FaqI | GGGAC | 2 cut(s) | 122, 963 |
| FatI | CATG | 7 cut(s) | 246, 351, 407, 510, 874, 996, 1392 |
| FauI | CCCGC | 1 cut(s) | 97 |
| Fnu4HI | GCNGC | 4 cut(s) | 987, 1398, 1503, 1608 |
| FokI | GGATG | 6 cut(s) | 296, 329, 371, 503, 584, 779 |
| FriOI | GRGCYC | 1 cut(s) | 1240 |
| Fsp4HI | GCNGC | 4 cut(s) | 987, 1398, 1503, 1608 |
| FspBI | CTAG | 3 cut(s) | 618, 1029, 1514 |
| GlaI | GCGC | 3 cut(s) | 118, 368, 479 |
| GluI | GCNGC | 4 cut(s) | 987, 1398, 1503, 1608 |
| GsuI | CTGGAG | 1 cut(s) | 1254 |
| HaeII | RGCGCY | 3 cut(s) | 120, 370, 481 |
| HaeIII | GGCC | 4 cut(s) | 68, 105, 634, 1668 |
| HapII | CCGG | 4 cut(s) | 106, 347, 389, 1571 |
| HgaI | GACGC | 1 cut(s) | 63 |
| HhaI | GCGC | 3 cut(s) | 119, 369, 480 |
| Hin1I | GRCGYC | 1 cut(s) | 117 |
| Hin1II | CATG | 7 cut(s) | 250, 355, 411, 514, 878, 1000, 1396 |
| Hin6I | GCGC | 3 cut(s) | 117, 367, 478 |
| HinP1I | GCGC | 3 cut(s) | 117, 367, 478 |
| HincII | GTYRAC | 1 cut(s) | 643 |
| HindII | GTYRAC | 1 cut(s) | 643 |
| HindIII | AAGCTT | 1 cut(s) | 1055 |
| HinfI | GANTC | 7 cut(s) | 416, 593, 650, 689, 729, 1066, 1132 |
| HpaII | CCGG | 4 cut(s) | 106, 347, 389, 1571 |
| HphI | GGTGA | 3 cut(s) | 336, 1597, 1703 |
| Hpy166II | GTNNAC | 6 cut(s) | 312, 643, 760, 1017, 1094, 1259 |
| Hpy188I | TCNGA | 9 cut(s) | 41, 85, 180, 427, 529, 694, 1426, 1495, 1674 |
| Hpy188III | TCNNGA | 8 cut(s) | 61, 78, 590, 686, 746, 875, 1029, 1051 |
| Hpy8I | GTNNAC | 6 cut(s) | 312, 643, 760, 1017, 1094, 1259 |
| Hpy99I | CGWCG | 3 cut(s) | 58, 79, 104 |
| HpyAV | CCTTC | 7 cut(s) | 58, 106, 432, 527, 1421, 1485, 1576 |
| HpyCH4III | ACNGT | 5 cut(s) | 848, 901, 1021, 1042, 1168 |
| HpyCH4IV | ACGT | 2 cut(s) | 56, 838 |
| HpyCH4V | TGCA | 9 cut(s) | 188, 384, 519, 869, 1325, 1354, 1505, 1579, 1607 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 373, 1193, 1508, 1517, 1576 |
| HpyF3I | CTNAG | 7 cut(s) | 165, 324, 526, 588, 603, 1251, 1544 |
| HpySE526I | ACGT | 2 cut(s) | 56, 838 |
| Hsp92I | GRCGYC | 1 cut(s) | 117 |
| Hsp92II | CATG | 7 cut(s) | 250, 355, 411, 514, 878, 1000, 1396 |
| HspAI | GCGC | 3 cut(s) | 117, 367, 478 |
| KasI | GGCGCC | 1 cut(s) | 116 |
| KpnI | GGTACC | 1 cut(s) | 836 |
| Kzo9I | GATC | 7 cut(s) | 50, 80, 124, 742, 930, 1266, 1547 |
| LmnI | GCTCC | 4 cut(s) | 41, 364, 904, 1235 |
| Lsp1109I | GCAGC | 4 cut(s) | 973, 1409, 1489, 1619 |
| LweI | GCATC | 1 cut(s) | 393 |
| MaeI | CTAG | 3 cut(s) | 618, 1029, 1514 |
| MaeII | ACGT | 2 cut(s) | 56, 838 |
| MaeIII | GTNAC | 4 cut(s) | 134, 1002, 1461, 1743 |
| MalI | GATC | 7 cut(s) | 52, 82, 126, 744, 932, 1268, 1549 |
| MboI | GATC | 7 cut(s) | 50, 80, 124, 742, 930, 1266, 1547 |
| MboII | GAAGA | 8 cut(s) | 121, 136, 572, 724, 812, 1141, 1470, 1631 |
| MhlI | GDGCHC | 2 cut(s) | 611, 1240 |
| MluCI | AATT | 5 cut(s) | 174, 181, 403, 451, 597 |
| Mly113I | GGCGCC | 1 cut(s) | 117 |
| MlyI | GAGTC | 3 cut(s) | 602, 698, 738 |
| MmeI | TCCRAC | 1 cut(s) | 706 |
| MseI | TTAA | 6 cut(s) | 669, 698, 1335, 1343, 1374, 1728 |
| MslI | CAYNNNNRTG | 3 cut(s) | 167, 389, 1409 |
| MspA1I | CMGCKG | 2 cut(s) | 1246, 1400 |
| MspI | CCGG | 4 cut(s) | 106, 347, 389, 1571 |
| MspR9I | CCNGG | 4 cut(s) | 107, 389, 396, 1121 |
| Mva1269I | GAATGC | 1 cut(s) | 548 |
| MvaI | CCWGG | 2 cut(s) | 396, 1121 |
| MvnI | CGCG | 1 cut(s) | 74 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 373, 1193, 1508, 1517, 1576 |
| NarI | GGCGCC | 1 cut(s) | 117 |
| NciI | CCSGG | 2 cut(s) | 107, 389 |
| NdeII | GATC | 7 cut(s) | 50, 80, 124, 742, 930, 1266, 1547 |
| NlaIII | CATG | 7 cut(s) | 250, 355, 411, 514, 878, 1000, 1396 |
| NmuCI | GTSAC | 1 cut(s) | 134 |
| NspI | RCATGY | 2 cut(s) | 250, 355 |
| OliI | CACNNNNGTG | 1 cut(s) | 167 |
| PagI | TCATGA | 1 cut(s) | 874 |
| PciI | ACATGT | 1 cut(s) | 246 |
| PctI | GAATGC | 1 cut(s) | 548 |
| PfeI | GAWTC | 4 cut(s) | 416, 650, 1066, 1132 |
| Pfl23II | CGTACG | 1 cut(s) | 15 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 487 |
| PkrI | GCNGC | 4 cut(s) | 988, 1399, 1504, 1609 |
| Ple19I | CGATCG | 1 cut(s) | 53 |
| PleI | GAGTC | 3 cut(s) | 601, 697, 737 |
| PluTI | GGCGCC | 1 cut(s) | 120 |
| PpsI | GAGTC | 3 cut(s) | 601, 697, 737 |
| PscI | ACATGT | 1 cut(s) | 246 |
| PshAI | GACNNNNGTC | 1 cut(s) | 156 |
| PsiI | TTATAA | 1 cut(s) | 279 |
| Psp124BI | GAGCTC | 1 cut(s) | 1240 |
| Psp6I | CCWGG | 2 cut(s) | 394, 1119 |
| PspGI | CCWGG | 2 cut(s) | 394, 1119 |
| PspLI | CGTACG | 1 cut(s) | 15 |
| PspPI | GGNCC | 3 cut(s) | 85, 632, 1666 |
| PstI | CTGCAG | 1 cut(s) | 1507 |
| PstNI | CAGNNNCTG | 1 cut(s) | 692 |
| PvuI | CGATCG | 1 cut(s) | 53 |
| PvuII | CAGCTG | 2 cut(s) | 1246, 1400 |
| RsaI | GTAC | 4 cut(s) | 17, 834, 1095, 1532 |
| RsaNI | GTAC | 4 cut(s) | 16, 833, 1094, 1531 |
| RseI | CAYNNNNRTG | 3 cut(s) | 167, 389, 1409 |
| SacI | GAGCTC | 1 cut(s) | 1240 |
| SaqAI | TTAA | 6 cut(s) | 669, 698, 1335, 1343, 1374, 1728 |
| SatI | GCNGC | 4 cut(s) | 987, 1398, 1503, 1608 |
| Sau3AI | GATC | 7 cut(s) | 50, 80, 124, 742, 930, 1266, 1547 |
| Sau96I | GGNCC | 3 cut(s) | 85, 632, 1666 |
| SchI | GAGTC | 3 cut(s) | 602, 698, 738 |
| ScrFI | CCNGG | 4 cut(s) | 107, 389, 396, 1121 |
| SduI | GDGCHC | 2 cut(s) | 611, 1240 |
| SfaNI | GCATC | 1 cut(s) | 393 |
| SfcI | CTRYAG | 3 cut(s) | 897, 1241, 1503 |
| SfoI | GGCGCC | 1 cut(s) | 118 |
| SinI | GGWCC | 1 cut(s) | 85 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 167, 389, 1409 |
| SmlI | CTYRAG | 1 cut(s) | 1760 |
| SmoI | CTYRAG | 1 cut(s) | 1760 |
| Sse9I | AATT | 5 cut(s) | 174, 181, 403, 451, 597 |
| SsiI | CCGC | 2 cut(s) | 90, 1112 |
| SspDI | GGCGCC | 1 cut(s) | 116 |
| SspMI | CTAG | 3 cut(s) | 618, 1029, 1514 |
| SstI | GAGCTC | 1 cut(s) | 1240 |
| StyD4I | CCNGG | 4 cut(s) | 105, 387, 394, 1119 |
| TaaI | ACNGT | 5 cut(s) | 848, 901, 1021, 1042, 1168 |
| TaiI | ACGT | 2 cut(s) | 59, 841 |
| TaqI | TCGA | 6 cut(s) | 49, 53, 60, 99, 147, 741 |
| TasI | AATT | 5 cut(s) | 174, 181, 403, 451, 597 |
| TfiI | GAWTC | 4 cut(s) | 416, 650, 1066, 1132 |
| Tru1I | TTAA | 6 cut(s) | 669, 698, 1335, 1343, 1374, 1728 |
| Tru9I | TTAA | 6 cut(s) | 669, 698, 1335, 1343, 1374, 1728 |
| TscAI | CASTG | 6 cut(s) | 438, 802, 851, 906, 1068, 1189 |
| TseFI | GTSAC | 1 cut(s) | 134 |
| TseI | GCWGC | 4 cut(s) | 986, 1397, 1502, 1607 |
| Tsp45I | GTSAC | 1 cut(s) | 134 |
| TspDTI | ATGAA | 9 cut(s) | 396, 464, 546, 783, 803, 845, 863, 985, 1142 |
| TspGWI | ACGGA | 2 cut(s) | 122, 329 |
| TspRI | CASTG | 6 cut(s) | 438, 802, 851, 906, 1068, 1189 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 487 |
| VpaK11BI | GGWCC | 1 cut(s) | 85 |
| XapI | RAATTY | 3 cut(s) | 181, 403, 451 |
| XbaI | TCTAGA | 1 cut(s) | 1028 |
| XceI | RCATGY | 2 cut(s) | 250, 355 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1289 |
| XspI | CTAG | 3 cut(s) | 618, 1029, 1514 |