Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0008710

Physical Location & Seq

Genomic Coordinates Forward (+)

63010045 .. 63014519

Gene Structure 4475 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG355000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGTGGGAGTAGCGTACGACTGCCTGGCCAACCCTCTCGGCGCCGTCCGATCAACTTTCGAAAAGGCCGCCTCTTCCGGATCCGACCCGGTCAACTTCGCCGGCCGCGACTGGGGCGCCGTCGACCTCTTCCGCCGCTTTCTCTTCGACGACGGCGGCCTCTCTCAGGTTCCGATTTTGAATTCTTCAACTATTAGATGGATTCAGCCCAATACTCTGGTTCGGTTTCGGGGGATGGTGCAAGATATGCTGGGAAATGAGCTCTATGTGGGTGCTTATAAGGATGGCTCGGTTTGGAGAACTAACAAGTTTGTGGATGTGGCTCAATACCCTATTGATTCTTGTTCCGAAACTCGGATATGGGAACGCCGTATGCTCTACTGTGTTCCGGTTCCGGGACTGAATTCGTGGACTGAGCCTCCGGCAGTGGTGTATAGAAGTATGGATTCGACAACCCAACATGGAGAGAAGCGCCAGAGATTGGATGAATCTACAGATAACATGGATTTTGATGTCTTAGATGAGGGATTTCAAGGTTCTCCATCCCCCAAAAAACTGAAAGAGGACGGACATCATTCCCAGTCTCAGGAGTTGAACGTTGAGGGCACCAGCTCTAGTATGAGTATGCTGCCTGATGTTAACAGGGATTCACTTCCTTGTCTTGTTAAGATATATGATTGTCCAGAGTCTGACATGAAGCTAAATGAGGTTTTTGAGTTTGTTGGAGTGTTCACTTTTGATCCAGAGTTTAAAGTGGAAAATGATGATGATGAGTTTGCAAATGGTTTTAGTGAAGATGTCTTGGTTCAGTTGCCCCCCAATAAGGTGCCACGTCTCCATTGTCTTACTCACAGGAAGCTTGCAGTTCAGGACTTCCTCCCTAGCTCCCCCACAATGGAGGTAAAGCCCAACTTGGTGAAAGATATCAGAAATGCTCTGTTGAGGCATCTTACAGCTGTTCTTGGTAATGATGGTGTAGCTGCTGAATTCCTGCTCTTGAATCTTTTGTCCACGGTGTATTCTAGAGTTGGCACTGTTGCTGTGGGGAAGCTTTCTCTAAATCTCAATTGTTTCAACAAAGAAAGTGTGCCTGTGTTTGGCCCTCGGCTTCTCCTTGCTATCAAGAATCTTTTACCTTTCACACACTGTATATCTCTAACAGTGGATTATCTTAACACTGCTTCTCTTGCGCCAAAAAAAGATTATGAGACAAACAGACTGATCACTGGAGCTCTGCAGCTGGCTGAGGGTTCACACTTGATCTTTGATGAGACCCAGTTGGAAGCTGGGACTCTCAACTCTGTTGGGGTTGAAAATGCAAGATTGCTTAAAACTCTAATGGAAATGCAAAAGGTGGAATATGATTTTCAGTACTATAAATTGGACATGGACACTGATGTCCAATTGCTTGTTCTTTCTGAAGGCAAATCAAACATCTTACCAGCTGACATAGTTTTACCTTTCCAACCCTCTTCAGTGGATTCCTTTGAAGCCACTGCAGAAGCACTAGAGGCTTGGAGATGGTACTTGGCTACTATTAGATCATTGCCCCATTCTATAGTGCCAGAAATACAGAAGGTGATAGAAAATGACTTGGTTGAAGCAAAGCAAGCAGATAGGAGTATAGGCACCCAAGACTTCAGCAGATTGCTGACAATGGGTCGACTGTTGTCTATGAGTTTCGGCGAAACCAGCCTATCATTGGAACATTGGCAGATGGTCAAGGAACTGGAGAGGTTAAGAAGAGAGAGGATCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0016043 GO:0022402 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MCM_bind

Protein Analysis

586

Amino Acids

65.88

Weight (kDa)

5.0

Isoelectric Point (pI)

41.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_bind	PF09739	44 - 585	1e-192	Mini-chromosome maintenance replisome factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40550
fragaria_vesca	FvH4_7g25850 FvH4_7g25850 FvH4_7g25850 FvH4_7g25850 FvH4_7g25850
malus_domestica	MD01G1166300.v1.1 MD01G1183300.v1.1 MD07G1233000.v1.1
prunus_persica	Prupe.2G263500_v2.0.a1 Prupe.2G263500_v2.0.a1
pyrus_communis	pycom01g17990 pycom07g21080
rosa_chinensis	RchiOBHm_Chr1g0372121
rosa_laevigata	RLG00000026921
rosa_multiflora	Rmu_sc0001755.1_g000024
rosa_roxburghii	Rroxscaffold_4G00285230
rosa_rugosa	Rorug01G0369900
rosa_samantha	Rh1AG378300 Rh1BG341600 Rh1CG355000 Rh1DG372700
rosa_wichuraiana	Rw1G033280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	279
AasI	GACNNNNNNGTC	1 cut(s)	1397
AccB1I	GGYRCC	5 cut(s)	41, 116, 605, 826, 1628
AccB7I	CCANNNNNTGG	1 cut(s)	481
AccI	GTMKAC	2 cut(s)	123, 1663
AccII	CGCG	1 cut(s)	108
AccIII	TCCGGA	1 cut(s)	77
AciI	CCGC	5 cut(s)	69, 106, 133, 136, 156
AclI	AACGTT	1 cut(s)	597
AclWI	GGATC	4 cut(s)	75, 88, 734, 1760
AcoI	YGGCCR	2 cut(s)	27, 103
AcsI	RAATTY	3 cut(s)	181, 403, 986
AcuI	CTGAAG	3 cut(s)	1440, 1458, 1624
AcyI	GRCGYC	2 cut(s)	42, 117
AfaI	GTAC	3 cut(s)	17, 1373, 1526
AgsI	TTSAA	9 cut(s)	181, 189, 533, 595, 1000, 1075, 1313, 1490, 1601
AhdI	GACNNNNNGTC	1 cut(s)	1659
AjiI	CACGTC	1 cut(s)	833
AjnI	CCWGG	1 cut(s)	24
AjuI	GAANNNNNNNTTGG	2 cut(s)	1395, 1427
Alw21I	GWGCWC	2 cut(s)	264, 1234
Alw26I	GTCTC	4 cut(s)	588, 839, 1202, 1265
AlwI	GGATC	4 cut(s)	75, 88, 734, 1760
AlwNI	CAGNNNCTG	1 cut(s)	689
Aor13HI	TCCGGA	1 cut(s)	77
AoxI	GGCC	5 cut(s)	27, 66, 103, 157, 1099
ApeKI	GCWGC	3 cut(s)	628, 980, 1237
ApoI	RAATTY	3 cut(s)	181, 403, 986
AspLEI	GCGC	4 cut(s)	44, 119, 474, 1192
AspS9I	GGNCC	1 cut(s)	1100
AsuC2I	CCSGG	2 cut(s)	89, 396
AsuHPI	GGTGA	2 cut(s)	928, 1591
AsuII	TTCGAA	1 cut(s)	60
BaeGI	GKGCMC	1 cut(s)	608
BalI	TGGCCA	1 cut(s)	29
BamHI	GGATCC	1 cut(s)	80
BanI	GGYRCC	5 cut(s)	41, 116, 605, 826, 1628
BanII	GRGCYC	2 cut(s)	264, 1234
Bbv12I	GWGCWC	2 cut(s)	264, 1234
BbvCI	CCTCAGC	1 cut(s)	1245
BbvI	GCAGC	3 cut(s)	615, 967, 1249
BccI	CCATC	7 cut(s)	192, 229, 278, 550, 965, 1515, 1711
BceAI	ACGGC	4 cut(s)	29, 104, 169, 354
BciT130I	CCWGG	1 cut(s)	26
BclI	TGATCA	1 cut(s)	1221
BcnI	CCSGG	2 cut(s)	89, 396
BcoDI	GTCTC	4 cut(s)	588, 839, 1202, 1265
BfaI	CTAG	4 cut(s)	615, 882, 1023, 1508
BfmI	CTRYAG	4 cut(s)	492, 1235, 1497, 1557
BfoI	RGCGCY	3 cut(s)	45, 120, 475
BisI	GCNGC	7 cut(s)	69, 106, 136, 157, 629, 981, 1238
BlsI	GCNGC	7 cut(s)	70, 107, 137, 158, 630, 982, 1239
BmcAI	AGTACT	1 cut(s)	1373
Bme1390I	CCNGG	3 cut(s)	26, 89, 396
BmeRI	GACNNNNNGTC	1 cut(s)	1659
BmgBI	CACGTC	1 cut(s)	833
BmgT120I	GGNCC	1 cut(s)	1100
BmiI	GGNNCC	8 cut(s)	43, 82, 118, 171, 393, 607, 828, 1630
BmrFI	CCNGG	3 cut(s)	26, 89, 396
BmrI	ACTGGG	3 cut(s)	121, 574, 1270
BmsI	GCATC	1 cut(s)	955
BmuI	ACTGGG	3 cut(s)	121, 574, 1270
BoxI	GACNNNNGTC	1 cut(s)	1669
BpmI	CTGGAG	2 cut(s)	1248, 1751
Bpu10I	CCTNAGC	1 cut(s)	1245
Bpu14I	TTCGAA	1 cut(s)	60
BpuMI	CCSGG	2 cut(s)	89, 396
BsaHI	GRCGYC	2 cut(s)	42, 117
BsaI	GGTCTC	1 cut(s)	1265
BsaJI	CCNNGG	2 cut(s)	1011, 1103
BsaWI	WCCGGW	2 cut(s)	77, 388
BsaXI	ACNNNNNCTCC	2 cut(s)	403, 433
Bse118I	RCCGGY	1 cut(s)	101
Bse1I	ACTGG	5 cut(s)	116, 580, 1231, 1276, 1734
Bse3DI	GCAATG	1 cut(s)	1544
BseAI	TCCGGA	1 cut(s)	77
BseBI	CCWGG	1 cut(s)	26
BseDI	CCNNGG	2 cut(s)	1011, 1103
BseGI	GGATG	5 cut(s)	240, 289, 322, 490, 542
BseMI	GCAATG	1 cut(s)	1544
BseMII	CTCAG	4 cut(s)	179, 405, 599, 1236
BseNI	ACTGG	5 cut(s)	116, 580, 1231, 1276, 1734
BseSI	GKGCMC	1 cut(s)	608
BseX3I	CGGCCG	1 cut(s)	103
BseXI	GCAGC	3 cut(s)	615, 967, 1249
BseYI	CCCAGC	2 cut(s)	250, 1286
Bsh1236I	CGCG	1 cut(s)	108
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	5 cut(s)	29, 68, 105, 159, 1101
BshNI	GGYRCC	5 cut(s)	41, 116, 605, 826, 1628
BsiEI	CGRYCG	1 cut(s)	106
BsiHKAI	GWGCWC	2 cut(s)	264, 1234
BsiSI	CCGG	6 cut(s)	78, 89, 102, 389, 395, 422
BsiWI	CGTACG	1 cut(s)	15
BslFI	GGGAC	2 cut(s)	411, 1303
BsmAI	GTCTC	4 cut(s)	588, 839, 1202, 1265
BsmBI	CGTCTC	1 cut(s)	839
BsmFI	GGGAC	2 cut(s)	411, 1303
BsnI	GGCC	5 cut(s)	29, 68, 105, 159, 1101
Bso31I	GGTCTC	1 cut(s)	1265
Bsp119I	TTCGAA	1 cut(s)	60
Bsp1286I	GDGCHC	3 cut(s)	264, 608, 1234
Bsp13I	TCCGGA	1 cut(s)	77
Bsp143I	GATC	7 cut(s)	50, 80, 739, 1221, 1260, 1541, 1752
BspACI	CCGC	5 cut(s)	69, 106, 133, 136, 156
BspANI	GGCC	5 cut(s)	29, 68, 105, 159, 1101
BspCNI	CTCAG	4 cut(s)	178, 406, 598, 1237
BspEI	TCCGGA	1 cut(s)	77
BspFNI	CGCG	1 cut(s)	108
BspLI	GGNNCC	8 cut(s)	43, 82, 118, 171, 393, 607, 828, 1630
BspMAI	CTGCAG	2 cut(s)	1239, 1501
BspPI	GGATC	4 cut(s)	75, 88, 734, 1760
BspT104I	TTCGAA	1 cut(s)	60
BspT107I	GGYRCC	5 cut(s)	41, 116, 605, 826, 1628
BspTNI	GGTCTC	1 cut(s)	1265
BsrDI	GCAATG	1 cut(s)	1544
BsrFI	RCCGGY	1 cut(s)	101
BsrI	ACTGG	5 cut(s)	116, 580, 1231, 1276, 1734
BssAI	RCCGGY	1 cut(s)	101
BssECI	CCNNGG	2 cut(s)	1011, 1103
BssMI	GATC	7 cut(s)	50, 80, 739, 1221, 1260, 1541, 1752
BssNI	GRCGYC	2 cut(s)	42, 117
Bst2UI	CCWGG	1 cut(s)	26
Bst4CI	ACNGT	6 cut(s)	383, 1015, 1036, 1148, 1162, 1668
Bst6I	CTCTTC	5 cut(s)	79, 134, 149, 1477, 1738
BstACI	GRCGYC	2 cut(s)	42, 117
BstAPI	GCANNNNNTGC	1 cut(s)	247
BstBI	TTCGAA	1 cut(s)	60
BstC8I	GCNNGC	4 cut(s)	103, 861, 1242, 1611
BstDEI	CTNAG	5 cut(s)	165, 414, 517, 585, 1245
BstDSI	CCRYGG	1 cut(s)	1011
BstENI	CCTNNNNNAGG	1 cut(s)	164
BstF5I	GGATG	5 cut(s)	240, 289, 322, 490, 542
BstFNI	CGCG	1 cut(s)	108
BstH2I	RGCGCY	3 cut(s)	45, 120, 475
BstHHI	GCGC	4 cut(s)	44, 119, 474, 1192
BstKTI	GATC	7 cut(s)	53, 83, 742, 1224, 1263, 1544, 1755
BstMAI	GTCTC	4 cut(s)	588, 839, 1202, 1265
BstMBI	GATC	7 cut(s)	50, 80, 739, 1221, 1260, 1541, 1752
BstMCI	CGRYCG	1 cut(s)	106
BstMWI	GCNNNNNNNGC	6 cut(s)	114, 247, 1187, 1511, 1610, 1692
BstNI	CCWGG	1 cut(s)	26
BstPAI	GACNNNNGTC	1 cut(s)	1669
BstSCI	CCNGG	3 cut(s)	24, 87, 394
BstSFI	CTRYAG	4 cut(s)	492, 1235, 1497, 1557
BstSLI	GKGCMC	1 cut(s)	608
BstUI	CGCG	1 cut(s)	108
BstV1I	GCAGC	3 cut(s)	615, 967, 1249
BstX2I	RGATCY	1 cut(s)	80
BstXI	CCANNNNNNTGG	1 cut(s)	217
BstYI	RGATCY	1 cut(s)	80
BstZI	CGGCCG	1 cut(s)	103
BsuRI	GGCC	5 cut(s)	29, 68, 105, 159, 1101
BtgI	CCRYGG	1 cut(s)	1011
BtrI	CACGTC	1 cut(s)	833
BtsCI	GGATG	5 cut(s)	240, 289, 322, 490, 542
BtsI	GCAGTG	3 cut(s)	432, 1176, 1494
BtsIMutI	CAGTG	9 cut(s)	432, 1032, 1144, 1167, 1176, 1224, 1392, 1482, 1494
Cac8I	GCNNGC	4 cut(s)	103, 861, 1242, 1611
CaiI	CAGNNNCTG	1 cut(s)	689
CfoI	GCGC	4 cut(s)	44, 119, 474, 1192
Cfr10I	RCCGGY	1 cut(s)	101
Cfr13I	GGNCC	1 cut(s)	1100
Csp6I	GTAC	3 cut(s)	16, 1372, 1525
CviAII	CATG	4 cut(s)	461, 502, 694, 1387
CviQI	GTAC	3 cut(s)	16, 1372, 1525
DdeI	CTNAG	5 cut(s)	165, 414, 517, 585, 1245
DinI	GGCGCC	2 cut(s)	43, 118
DpnI	GATC	7 cut(s)	52, 82, 741, 1223, 1262, 1543, 1754
DpnII	GATC	7 cut(s)	50, 80, 739, 1221, 1260, 1541, 1752
DraI	TTTAAA	1 cut(s)	751
DrdI	GACNNNNNNGTC	1 cut(s)	1397
DriI	GACNNNNNGTC	1 cut(s)	1659
DseDI	GACNNNNNNGTC	1 cut(s)	1397
EaeI	YGGCCR	2 cut(s)	27, 103
EagI	CGGCCG	1 cut(s)	103
Eam1104I	CTCTTC	5 cut(s)	79, 134, 149, 1477, 1738
Eam1105I	GACNNNNNGTC	1 cut(s)	1659
EarI	CTCTTC	5 cut(s)	79, 134, 149, 1477, 1738
EciI	GGCGGA	1 cut(s)	122
Ecl136II	GAGCTC	2 cut(s)	262, 1232
EclXI	CGGCCG	1 cut(s)	103
Eco24I	GRGCYC	2 cut(s)	264, 1234
Eco31I	GGTCTC	1 cut(s)	1265
Eco32I	GATATC	1 cut(s)	925
Eco52I	CGGCCG	1 cut(s)	103
Eco53kI	GAGCTC	2 cut(s)	262, 1232
Eco57I	CTGAAG	3 cut(s)	1440, 1458, 1624
EcoICRI	GAGCTC	2 cut(s)	262, 1232
EcoNI	CCTNNNNNAGG	1 cut(s)	164
EcoRI	GAATTC	3 cut(s)	181, 403, 986
EcoRII	CCWGG	1 cut(s)	24
EcoRV	GATATC	1 cut(s)	925
EcoT38I	GRGCYC	2 cut(s)	264, 1234
EgeI	GGCGCC	2 cut(s)	43, 118
EheI	GGCGCC	2 cut(s)	43, 118
Esp3I	CGTCTC	1 cut(s)	839
FaeI	CATG	4 cut(s)	464, 505, 697, 1390
FalI	AAGNNNNNCTT	2 cut(s)	896, 928
FaqI	GGGAC	2 cut(s)	411, 1303
FatI	CATG	4 cut(s)	460, 501, 693, 1386
FbaI	TGATCA	1 cut(s)	1221
FblI	GTMKAC	2 cut(s)	123, 1663
Fnu4HI	GCNGC	7 cut(s)	69, 106, 136, 157, 629, 981, 1238
FokI	GGATG	5 cut(s)	247, 296, 329, 497, 529
FriOI	GRGCYC	2 cut(s)	264, 1234
Fsp4HI	GCNGC	7 cut(s)	69, 106, 136, 157, 629, 981, 1238
FspBI	CTAG	4 cut(s)	615, 882, 1023, 1508
GlaI	GCGC	4 cut(s)	43, 118, 473, 1191
GluI	GCNGC	7 cut(s)	69, 106, 136, 157, 629, 981, 1238
GsaI	CCCAGC	2 cut(s)	254, 1290
GsuI	CTGGAG	2 cut(s)	1248, 1751
HaeII	RGCGCY	3 cut(s)	45, 120, 475
HaeIII	GGCC	5 cut(s)	29, 68, 105, 159, 1101
HapII	CCGG	6 cut(s)	78, 89, 102, 389, 395, 422
HhaI	GCGC	4 cut(s)	44, 119, 474, 1192
Hin1I	GRCGYC	2 cut(s)	42, 117
Hin1II	CATG	4 cut(s)	464, 505, 697, 1390
Hin6I	GCGC	4 cut(s)	42, 117, 472, 1190
HinP1I	GCGC	4 cut(s)	42, 117, 472, 1190
HincII	GTYRAC	4 cut(s)	94, 124, 640, 1664
HindII	GTYRAC	4 cut(s)	94, 124, 640, 1664
HindIII	AAGCTT	2 cut(s)	857, 1049
HpaI	GTTAAC	1 cut(s)	640
HpaII	CCGG	6 cut(s)	78, 89, 102, 389, 395, 422
HphI	GGTGA	2 cut(s)	928, 1591
Hpy166II	GTNNAC	8 cut(s)	94, 124, 411, 640, 732, 1011, 1253, 1664
Hpy188I	TCNGA	8 cut(s)	50, 85, 174, 349, 357, 691, 929, 1420
Hpy188III	TCNNGA	8 cut(s)	78, 587, 683, 743, 869, 997, 1023, 1123
Hpy8I	GTNNAC	8 cut(s)	94, 124, 411, 640, 732, 1011, 1253, 1664
Hpy99I	CGWCG	3 cut(s)	125, 152, 155
HpyAV	CCTTC	2 cut(s)	1415, 1570
HpyCH4III	ACNGT	6 cut(s)	383, 1015, 1036, 1148, 1162, 1668
HpyCH4IV	ACGT	2 cut(s)	597, 832
HpyCH4V	TGCA	7 cut(s)	241, 779, 863, 1237, 1319, 1348, 1499
HpyF10VI	GCNNNNNNNGC	6 cut(s)	114, 247, 1187, 1511, 1610, 1692
HpyF3I	CTNAG	5 cut(s)	165, 414, 517, 585, 1245
HpySE526I	ACGT	2 cut(s)	597, 832
Hsp92I	GRCGYC	2 cut(s)	42, 117
Hsp92II	CATG	4 cut(s)	464, 505, 697, 1390
HspAI	GCGC	4 cut(s)	42, 117, 472, 1190
KasI	GGCGCC	2 cut(s)	41, 116
Kpn2I	TCCGGA	1 cut(s)	77
KroI	GCCGGC	1 cut(s)	101
KroNI	GCCGGC	1 cut(s)	103
Ksp22I	TGATCA	1 cut(s)	1221
KspAI	GTTAAC	1 cut(s)	640
Kzo9I	GATC	7 cut(s)	50, 80, 739, 1221, 1260, 1541, 1752
LmnI	GCTCC	2 cut(s)	890, 1229
Lsp1109I	GCAGC	3 cut(s)	615, 967, 1249
LweI	GCATC	1 cut(s)	955
MaeI	CTAG	4 cut(s)	615, 882, 1023, 1508
MaeII	ACGT	2 cut(s)	597, 832
MalI	GATC	7 cut(s)	52, 82, 741, 1223, 1262, 1543, 1754
MboI	GATC	7 cut(s)	50, 80, 739, 1221, 1260, 1541, 1752
MboII	GAAGA	7 cut(s)	66, 121, 136, 177, 806, 1464, 1755
MfeI	CAATTG	2 cut(s)	1066, 1403
MflI	RGATCY	1 cut(s)	80
MhlI	GDGCHC	3 cut(s)	264, 608, 1234
MlsI	TGGCCA	1 cut(s)	29
MluCI	AATT	6 cut(s)	181, 403, 986, 1066, 1379, 1403
MluNI	TGGCCA	1 cut(s)	29
Mly113I	GGCGCC	2 cut(s)	42, 117
MlyI	GAGTC	2 cut(s)	695, 1285
MmeI	TCCRAC	4 cut(s)	108, 703, 1260, 1489
Mox20I	TGGCCA	1 cut(s)	29
MroI	TCCGGA	1 cut(s)	77
MroNI	GCCGGC	1 cut(s)	101
MscI	TGGCCA	1 cut(s)	29
MseI	TTAA	6 cut(s)	639, 666, 750, 1173, 1329, 1739
Msp20I	TGGCCA	1 cut(s)	29
MspA1I	CMGCKG	3 cut(s)	956, 1240, 1445
MspI	CCGG	6 cut(s)	78, 89, 102, 389, 395, 422
MspR9I	CCNGG	3 cut(s)	26, 89, 396
MunI	CAATTG	2 cut(s)	1066, 1403
MvaI	CCWGG	1 cut(s)	26
MvnI	CGCG	1 cut(s)	108
MwoI	GCNNNNNNNGC	6 cut(s)	114, 247, 1187, 1511, 1610, 1692
NaeI	GCCGGC	1 cut(s)	103
NarI	GGCGCC	2 cut(s)	42, 117
NciI	CCSGG	2 cut(s)	89, 396
NdeII	GATC	7 cut(s)	50, 80, 739, 1221, 1260, 1541, 1752
NgoMIV	GCCGGC	1 cut(s)	101
NlaIII	CATG	4 cut(s)	464, 505, 697, 1390
NlaIV	GGNNCC	8 cut(s)	43, 82, 118, 171, 393, 607, 828, 1630
NmeAIII	GCCGAG	2 cut(s)	18, 1084
NspV	TTCGAA	1 cut(s)	60
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PdiI	GCCGGC	1 cut(s)	103
PfeI	GAWTC	8 cut(s)	202, 338, 446, 488, 647, 1000, 1126, 1481
Pfl23II	CGTACG	1 cut(s)	15
PflFI	GACNNNGTC	1 cut(s)	89
PflMI	CCANNNNNTGG	1 cut(s)	481
PfoI	TCCNGGA	1 cut(s)	394
PkrI	GCNGC	7 cut(s)	70, 107, 137, 158, 630, 982, 1239
PleI	GAGTC	2 cut(s)	694, 1285
PluTI	GGCGCC	2 cut(s)	45, 120
PpsI	GAGTC	2 cut(s)	694, 1285
PshAI	GACNNNNGTC	1 cut(s)	1669
PsiI	TTATAA	1 cut(s)	279
Psp124BI	GAGCTC	2 cut(s)	264, 1234
Psp1406I	AACGTT	1 cut(s)	597
Psp6I	CCWGG	1 cut(s)	24
PspFI	CCCAGC	2 cut(s)	250, 1286
PspGI	CCWGG	1 cut(s)	24
PspLI	CGTACG	1 cut(s)	15
PspN4I	GGNNCC	8 cut(s)	43, 82, 118, 171, 393, 607, 828, 1630
PspPI	GGNCC	1 cut(s)	1100
PstI	CTGCAG	2 cut(s)	1239, 1501
PstNI	CAGNNNCTG	1 cut(s)	689
PsuI	RGATCY	1 cut(s)	80
PsyI	GACNNNGTC	1 cut(s)	89
PvuII	CAGCTG	3 cut(s)	956, 1240, 1445
RsaI	GTAC	3 cut(s)	17, 1373, 1526
RsaNI	GTAC	3 cut(s)	16, 1372, 1525
SacI	GAGCTC	2 cut(s)	264, 1234
SalI	GTCGAC	2 cut(s)	122, 1662
SaqAI	TTAA	6 cut(s)	639, 666, 750, 1173, 1329, 1739
SatI	GCNGC	7 cut(s)	69, 106, 136, 157, 629, 981, 1238
Sau3AI	GATC	7 cut(s)	50, 80, 739, 1221, 1260, 1541, 1752
Sau96I	GGNCC	1 cut(s)	1100
ScaI	AGTACT	1 cut(s)	1373
SchI	GAGTC	2 cut(s)	695, 1285
ScrFI	CCNGG	3 cut(s)	26, 89, 396
SduI	GDGCHC	3 cut(s)	264, 608, 1234
SfaNI	GCATC	1 cut(s)	955
SfcI	CTRYAG	4 cut(s)	492, 1235, 1497, 1557
SfoI	GGCGCC	2 cut(s)	43, 118
SfuI	TTCGAA	1 cut(s)	60
Sse9I	AATT	6 cut(s)	181, 403, 986, 1066, 1379, 1403
SsiI	CCGC	5 cut(s)	69, 106, 133, 136, 156
SspDI	GGCGCC	2 cut(s)	41, 116
SspMI	CTAG	4 cut(s)	615, 882, 1023, 1508
SstI	GAGCTC	2 cut(s)	264, 1234
StyD4I	CCNGG	3 cut(s)	24, 87, 394
TaaI	ACNGT	6 cut(s)	383, 1015, 1036, 1148, 1162, 1668
TaiI	ACGT	2 cut(s)	600, 835
TaqI	TCGA	5 cut(s)	60, 123, 147, 449, 1663
TasI	AATT	6 cut(s)	181, 403, 986, 1066, 1379, 1403
TatI	WGTACW	1 cut(s)	1371
TauI	GCSGC	4 cut(s)	71, 108, 138, 159
TfiI	GAWTC	8 cut(s)	202, 338, 446, 488, 647, 1000, 1126, 1481
Tru1I	TTAA	6 cut(s)	639, 666, 750, 1173, 1329, 1739
Tru9I	TTAA	6 cut(s)	639, 666, 750, 1173, 1329, 1739
TscAI	CASTG	9 cut(s)	432, 1039, 1151, 1167, 1183, 1231, 1399, 1482, 1501
TseI	GCWGC	3 cut(s)	628, 980, 1237
TspDTI	ATGAA	2 cut(s)	501, 710
TspGWI	ACGGA	1 cut(s)	582
TspRI	CASTG	9 cut(s)	432, 1039, 1151, 1167, 1183, 1231, 1399, 1482, 1501
Tth111I	GACNNNGTC	1 cut(s)	89
Van91I	CCANNNNNTGG	1 cut(s)	481
XagI	CCTNNNNNAGG	1 cut(s)	164
XapI	RAATTY	3 cut(s)	181, 403, 986
XbaI	TCTAGA	1 cut(s)	1022
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1283, 1699
XmiI	GTMKAC	2 cut(s)	123, 1663
XspI	CTAG	4 cut(s)	615, 882, 1023, 1508
ZrmI	AGTACT	1 cut(s)	1373

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.