Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0008710

Physical Location & Seq

Genomic Coordinates Forward (+)

61390597 .. 61394325

Gene Structure 3729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G033280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGGTGGGAGTAGCGCACGACTGCCTGGCCAACCCTCTCGGCGCCGTCCGATCAACTTTCGAAAAGGCCGTCTCTTCCGGATCCGACCCGGTCAACTTCGCCGGCCGCGACTGGGGCGCCGTCGACCTCTTCCGCCGCTTTCTCTTCGACGACGGCGGCCTCTCTCAGGTTCCGATTTTGAATTCTTCAACTATTAGATGGATTCAGCCCAATACTCTGGTTCGGTTTCGGGGGATGGTGCAAGATATGCTGGGAAATGAGCTCTATGTGGGTGCTTATAAGGATGGCTCGGTTTGGAGAACTAACAAGTTTGTGGATGTGGCTCAATACCCTATTGATTCTTGTTCCGAAACTCGGATATGGGAACGCCGTATGCTCTACTGTGTTCCGGTTCCGGGACTGAATTCGTGGACTGAACCTCCGGCAGTGGTGTATAGAAGTATGGATTCGACAACCCAACATGGAGAGAAGCGCCCGAGATTGGATGAATCTACAGATAACATGGATTTTGATGTCTCAGATGAGGGATTTCAAGGTTCTCCATCCCCCAAAAAACTGGTAAGACGGAATCCTTCCCAGTCTCAGGAGTTGAACGTTGAGGGCACCAGCTCTAGTATGAGTATGCCGCCTGATGTTAACAGGGATTCACTTCCTTGTCTTGTTAAGATATATGATTGTCCAGAGTCTGACATGAAGCTAAATGAGGTTTTTGAGTTTGTTGGAGTGTTCACTTTTGATCCAGAGTTTAAAGTGGAAAATGATGATGATGAGTTTGCAAATGGTTTTAGTGAAGATGTCTTGGTTCAGTTGCCCCCCAATAAGGTGCCACGTCTCCATTGTCTTACTCACAGGAAGCTTGCAGTTCAGGACTTCCTCCCTAGCTCCCCCACAATGGAGGTAAAGCCCAACTTGGTGAAAGATATCAGAAATGCTCTGTTGAGGCATCTTACAGCTGTTCTTGGTAATGATGGTGTAGCTGCTGAATTCCTGCTCTTGCATCTTTTGTCCATGGTGTATTCTAGAGTTGGCACTGTTGCTGTGGGGAAGCTTTCTCTAAATCTCAATTGTTTCAACAAAGAAAGTGTGCCTGTGTTTGGCCCTCGTCTTCTCCTTGCTATCAAGAATCTTTTACCTTTCACACACTGTATATCTCTAACAGTGGATTATCTTAACACTGCTTCTCTTGTGCCAAAAAAAGATTATGAGACAAACAGACTGATTACTGGAGCTCTGCAGCTGGCTGAGGGTTCACACTTGATCTTTGATGAGACCCAGTTGGAAGCTGGGACTCTCAACTCTGTTGGGGTTGAAAATGCAAGATTGCTTAAAACTCTAATGGAAATGCAAAAGGTGGAATATGATTTTCAGTACTATAAATTGGACATGGACGCTGATGTCCAATTGCTTGTTCTTTCTGAAGGCAAATCAAACATCTTACCAGCTGACATAGTTTTACCTTTCCAACCCTCTTCAGTGGATTCCTTTGAAGCCACTGCAGAAGCACTAGAGGCTTGGAGATGGTACTTGGCTACTATTAGATCATTGCCCCATTCTATAGAGCCAGAAATACAGAAGGTGATAGAAAATGACTTGGTTGAAGCAAAGCAAGCAGATAGGAGTATAGGCTGCCAAGACTTCAGCAGATTGCTGACAATGGGTCGACTGTTGTCTATGAGTTTCGGCGAAACCAGCCTATCATTGGAACATTGGCAGATGGTCAAGGAACTGGAGAGGTTAAGAAGAGAGAGGATCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006301 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0009987 GO:0016043 GO:0022402 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MCM_bind

Protein Analysis

585

Amino Acids

65.81

Weight (kDa)

5.08

Isoelectric Point (pI)

43.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_bind	PF09739	44 - 584	1.4e-193	Mini-chromosome maintenance replisome factor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40550
fragaria_vesca	FvH4_7g25850 FvH4_7g25850 FvH4_7g25850 FvH4_7g25850 FvH4_7g25850
malus_domestica	MD01G1166300.v1.1 MD01G1183300.v1.1 MD07G1233000.v1.1
prunus_persica	Prupe.2G263500_v2.0.a1 Prupe.2G263500_v2.0.a1
pyrus_communis	pycom01g17990 pycom07g21080
rosa_chinensis	RchiOBHm_Chr1g0372121
rosa_laevigata	RLG00000026921
rosa_multiflora	Rmu_sc0001755.1_g000024
rosa_roxburghii	Rroxscaffold_4G00285230
rosa_rugosa	Rorug01G0369900
rosa_samantha	Rh1AG378300 Rh1BG341600 Rh1CG355000 Rh1DG372700
rosa_wichuraiana	Rw1G033280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	279
AasI	GACNNNNNNGTC	1 cut(s)	1394
AccB1I	GGYRCC	4 cut(s)	41, 116, 602, 823
AccI	GTMKAC	2 cut(s)	123, 1660
AccII	CGCG	1 cut(s)	108
AccIII	TCCGGA	1 cut(s)	77
AciI	CCGC	5 cut(s)	106, 133, 136, 156, 626
AclI	AACGTT	1 cut(s)	594
AclWI	GGATC	4 cut(s)	75, 88, 731, 1757
AcoI	YGGCCR	2 cut(s)	27, 103
AcsI	RAATTY	3 cut(s)	181, 403, 983
AcuI	CTGAAG	3 cut(s)	1437, 1455, 1621
AcyI	GRCGYC	2 cut(s)	42, 117
AfaI	GTAC	2 cut(s)	1370, 1523
AgsI	TTSAA	8 cut(s)	181, 189, 533, 592, 1072, 1310, 1487, 1598
AhdI	GACNNNNNGTC	1 cut(s)	1656
AjiI	CACGTC	1 cut(s)	830
AjnI	CCWGG	1 cut(s)	24
AjuI	GAANNNNNNNTTGG	2 cut(s)	1392, 1424
Alw21I	GWGCWC	2 cut(s)	264, 1231
Alw26I	GTCTC	6 cut(s)	76, 520, 585, 836, 1199, 1262
AlwI	GGATC	4 cut(s)	75, 88, 731, 1757
AlwNI	CAGNNNCTG	1 cut(s)	686
Ama87I	CYCGRG	1 cut(s)	475
Aor13HI	TCCGGA	1 cut(s)	77
AoxI	GGCC	5 cut(s)	27, 66, 103, 157, 1096
ApeKI	GCWGC	3 cut(s)	977, 1234, 1626
ApoI	RAATTY	3 cut(s)	181, 403, 983
ArsI	GACNNNNNNTTYG	2 cut(s)	54, 86
AspLEI	GCGC	4 cut(s)	16, 44, 119, 474
AspS9I	GGNCC	1 cut(s)	1097
AsuC2I	CCSGG	2 cut(s)	89, 396
AsuHPI	GGTGA	2 cut(s)	925, 1588
AsuII	TTCGAA	1 cut(s)	60
AvaI	CYCGRG	1 cut(s)	475
BaeGI	GKGCMC	1 cut(s)	605
BalI	TGGCCA	1 cut(s)	29
BamHI	GGATCC	1 cut(s)	80
BanI	GGYRCC	4 cut(s)	41, 116, 602, 823
BanII	GRGCYC	2 cut(s)	264, 1231
BbsI	GAAGAC	1 cut(s)	1097
Bbv12I	GWGCWC	2 cut(s)	264, 1231
BbvCI	CCTCAGC	1 cut(s)	1242
BbvI	GCAGC	3 cut(s)	964, 1246, 1613
BccI	CCATC	7 cut(s)	192, 229, 278, 550, 962, 1512, 1708
BceAI	ACGGC	5 cut(s)	29, 53, 104, 169, 354
BciT130I	CCWGG	1 cut(s)	26
BcnI	CCSGG	2 cut(s)	89, 396
BcoDI	GTCTC	6 cut(s)	76, 520, 585, 836, 1199, 1262
BfaI	CTAG	4 cut(s)	612, 879, 1020, 1505
BfmI	CTRYAG	4 cut(s)	492, 1232, 1494, 1554
BfoI	RGCGCY	3 cut(s)	45, 120, 475
BisI	GCNGC	7 cut(s)	106, 136, 157, 626, 978, 1235, 1627
BlsI	GCNGC	7 cut(s)	107, 137, 158, 627, 979, 1236, 1628
BmcAI	AGTACT	1 cut(s)	1370
Bme1390I	CCNGG	3 cut(s)	26, 89, 396
BmeRI	GACNNNNNGTC	1 cut(s)	1656
BmeT110I	CYCGRG	1 cut(s)	475
BmgBI	CACGTC	1 cut(s)	830
BmgT120I	GGNCC	1 cut(s)	1097
BmiI	GGNNCC	7 cut(s)	43, 82, 118, 171, 393, 604, 825
BmrFI	CCNGG	3 cut(s)	26, 89, 396
BmrI	ACTGGG	3 cut(s)	121, 571, 1267
BmsI	GCATC	2 cut(s)	952, 1006
BmuI	ACTGGG	3 cut(s)	121, 571, 1267
BoxI	GACNNNNGTC	1 cut(s)	1666
BpiI	GAAGAC	1 cut(s)	1097
BpmI	CTGGAG	2 cut(s)	1245, 1748
Bpu10I	CCTNAGC	1 cut(s)	1242
Bpu14I	TTCGAA	1 cut(s)	60
BpuMI	CCSGG	2 cut(s)	89, 396
BsaHI	GRCGYC	2 cut(s)	42, 117
BsaI	GGTCTC	1 cut(s)	1262
BsaJI	CCNNGG	1 cut(s)	1008
BsaWI	WCCGGW	2 cut(s)	77, 388
BsaXI	ACNNNNNCTCC	2 cut(s)	403, 433
Bse118I	RCCGGY	1 cut(s)	101
Bse1I	ACTGG	6 cut(s)	116, 561, 577, 1228, 1273, 1731
Bse3DI	GCAATG	1 cut(s)	1541
BseAI	TCCGGA	1 cut(s)	77
BseBI	CCWGG	1 cut(s)	26
BseDI	CCNNGG	1 cut(s)	1008
BseGI	GGATG	5 cut(s)	240, 289, 322, 490, 542
BseMI	GCAATG	1 cut(s)	1541
BseMII	CTCAG	4 cut(s)	179, 531, 596, 1233
BseNI	ACTGG	6 cut(s)	116, 561, 577, 1228, 1273, 1731
BseSI	GKGCMC	1 cut(s)	605
BseX3I	CGGCCG	1 cut(s)	103
BseXI	GCAGC	3 cut(s)	964, 1246, 1613
BseYI	CCCAGC	2 cut(s)	250, 1283
Bsh1236I	CGCG	1 cut(s)	108
Bsh1285I	CGRYCG	1 cut(s)	106
BshFI	GGCC	5 cut(s)	29, 68, 105, 159, 1098
BshNI	GGYRCC	4 cut(s)	41, 116, 602, 823
BsiEI	CGRYCG	1 cut(s)	106
BsiHKAI	GWGCWC	2 cut(s)	264, 1231
BsiHKCI	CYCGRG	1 cut(s)	475
BsiSI	CCGG	6 cut(s)	78, 89, 102, 389, 395, 422
BslFI	GGGAC	2 cut(s)	411, 1300
BsmAI	GTCTC	6 cut(s)	76, 520, 585, 836, 1199, 1262
BsmBI	CGTCTC	2 cut(s)	76, 836
BsmFI	GGGAC	2 cut(s)	411, 1300
BsnI	GGCC	5 cut(s)	29, 68, 105, 159, 1098
Bso31I	GGTCTC	1 cut(s)	1262
BsoBI	CYCGRG	1 cut(s)	475
Bsp119I	TTCGAA	1 cut(s)	60
Bsp1286I	GDGCHC	3 cut(s)	264, 605, 1231
Bsp13I	TCCGGA	1 cut(s)	77
Bsp143I	GATC	6 cut(s)	50, 80, 736, 1257, 1538, 1749
Bsp19I	CCATGG	1 cut(s)	1008
BspACI	CCGC	5 cut(s)	106, 133, 136, 156, 626
BspANI	GGCC	5 cut(s)	29, 68, 105, 159, 1098
BspCNI	CTCAG	4 cut(s)	178, 530, 595, 1234
BspEI	TCCGGA	1 cut(s)	77
BspFNI	CGCG	1 cut(s)	108
BspLI	GGNNCC	7 cut(s)	43, 82, 118, 171, 393, 604, 825
BspMAI	CTGCAG	2 cut(s)	1236, 1498
BspPI	GGATC	4 cut(s)	75, 88, 731, 1757
BspT104I	TTCGAA	1 cut(s)	60
BspT107I	GGYRCC	4 cut(s)	41, 116, 602, 823
BspTNI	GGTCTC	1 cut(s)	1262
BsrDI	GCAATG	1 cut(s)	1541
BsrFI	RCCGGY	1 cut(s)	101
BsrI	ACTGG	6 cut(s)	116, 561, 577, 1228, 1273, 1731
BssAI	RCCGGY	1 cut(s)	101
BssECI	CCNNGG	1 cut(s)	1008
BssMI	GATC	6 cut(s)	50, 80, 736, 1257, 1538, 1749
BssNI	GRCGYC	2 cut(s)	42, 117
BssT1I	CCWWGG	1 cut(s)	1008
Bst2UI	CCWGG	1 cut(s)	26
Bst4CI	ACNGT	5 cut(s)	383, 1033, 1145, 1159, 1665
Bst6I	CTCTTC	5 cut(s)	79, 134, 149, 1474, 1735
BstACI	GRCGYC	2 cut(s)	42, 117
BstAPI	GCANNNNNTGC	1 cut(s)	247
BstBI	TTCGAA	1 cut(s)	60
BstC8I	GCNNGC	4 cut(s)	103, 858, 1239, 1608
BstDEI	CTNAG	4 cut(s)	165, 517, 582, 1242
BstDSI	CCRYGG	1 cut(s)	1008
BstENI	CCTNNNNNAGG	1 cut(s)	164
BstF5I	GGATG	5 cut(s)	240, 289, 322, 490, 542
BstFNI	CGCG	1 cut(s)	108
BstH2I	RGCGCY	3 cut(s)	45, 120, 475
BstHHI	GCGC	4 cut(s)	16, 44, 119, 474
BstKTI	GATC	6 cut(s)	53, 83, 739, 1260, 1541, 1752
BstMAI	GTCTC	6 cut(s)	76, 520, 585, 836, 1199, 1262
BstMBI	GATC	6 cut(s)	50, 80, 736, 1257, 1538, 1749
BstMCI	CGRYCG	1 cut(s)	106
BstMWI	GCNNNNNNNGC	5 cut(s)	114, 247, 1508, 1607, 1689
BstNI	CCWGG	1 cut(s)	26
BstPAI	GACNNNNGTC	1 cut(s)	1666
BstSCI	CCNGG	3 cut(s)	24, 87, 394
BstSFI	CTRYAG	4 cut(s)	492, 1232, 1494, 1554
BstSLI	GKGCMC	1 cut(s)	605
BstUI	CGCG	1 cut(s)	108
BstV1I	GCAGC	3 cut(s)	964, 1246, 1613
BstV2I	GAAGAC	1 cut(s)	1097
BstX2I	RGATCY	1 cut(s)	80
BstXI	CCANNNNNNTGG	2 cut(s)	217, 556
BstYI	RGATCY	1 cut(s)	80
BstZI	CGGCCG	1 cut(s)	103
BsuRI	GGCC	5 cut(s)	29, 68, 105, 159, 1098
BtgI	CCRYGG	1 cut(s)	1008
BtrI	CACGTC	1 cut(s)	830
BtsCI	GGATG	5 cut(s)	240, 289, 322, 490, 542
BtsI	GCAGTG	3 cut(s)	432, 1173, 1491
BtsIMutI	CAGTG	7 cut(s)	432, 1029, 1141, 1164, 1173, 1479, 1491
Cac8I	GCNNGC	4 cut(s)	103, 858, 1239, 1608
CaiI	CAGNNNCTG	1 cut(s)	686
CfoI	GCGC	4 cut(s)	16, 44, 119, 474
Cfr10I	RCCGGY	1 cut(s)	101
Cfr13I	GGNCC	1 cut(s)	1097
CseI	GACGC	1 cut(s)	1397
Csp6I	GTAC	2 cut(s)	1369, 1522
CviAII	CATG	5 cut(s)	461, 502, 691, 1009, 1384
CviQI	GTAC	2 cut(s)	1369, 1522
DdeI	CTNAG	4 cut(s)	165, 517, 582, 1242
DinI	GGCGCC	2 cut(s)	43, 118
DpnI	GATC	6 cut(s)	52, 82, 738, 1259, 1540, 1751
DpnII	GATC	6 cut(s)	50, 80, 736, 1257, 1538, 1749
DraI	TTTAAA	1 cut(s)	748
DrdI	GACNNNNNNGTC	1 cut(s)	1394
DriI	GACNNNNNGTC	1 cut(s)	1656
DseDI	GACNNNNNNGTC	1 cut(s)	1394
EaeI	YGGCCR	2 cut(s)	27, 103
EagI	CGGCCG	1 cut(s)	103
Eam1104I	CTCTTC	5 cut(s)	79, 134, 149, 1474, 1735
Eam1105I	GACNNNNNGTC	1 cut(s)	1656
EarI	CTCTTC	5 cut(s)	79, 134, 149, 1474, 1735
EciI	GGCGGA	1 cut(s)	122
Ecl136II	GAGCTC	2 cut(s)	262, 1229
EclXI	CGGCCG	1 cut(s)	103
Eco130I	CCWWGG	1 cut(s)	1008
Eco24I	GRGCYC	2 cut(s)	264, 1231
Eco31I	GGTCTC	1 cut(s)	1262
Eco32I	GATATC	1 cut(s)	922
Eco52I	CGGCCG	1 cut(s)	103
Eco53kI	GAGCTC	2 cut(s)	262, 1229
Eco57I	CTGAAG	3 cut(s)	1437, 1455, 1621
Eco88I	CYCGRG	1 cut(s)	475
EcoICRI	GAGCTC	2 cut(s)	262, 1229
EcoNI	CCTNNNNNAGG	1 cut(s)	164
EcoRI	GAATTC	3 cut(s)	181, 403, 983
EcoRII	CCWGG	1 cut(s)	24
EcoRV	GATATC	1 cut(s)	922
EcoT14I	CCWWGG	1 cut(s)	1008
EcoT38I	GRGCYC	2 cut(s)	264, 1231
EgeI	GGCGCC	2 cut(s)	43, 118
EheI	GGCGCC	2 cut(s)	43, 118
ErhI	CCWWGG	1 cut(s)	1008
Esp3I	CGTCTC	2 cut(s)	76, 836
FaeI	CATG	5 cut(s)	464, 505, 694, 1012, 1387
FalI	AAGNNNNNCTT	2 cut(s)	893, 925
FaqI	GGGAC	2 cut(s)	411, 1300
FatI	CATG	5 cut(s)	460, 501, 690, 1008, 1383
FblI	GTMKAC	2 cut(s)	123, 1660
Fnu4HI	GCNGC	7 cut(s)	106, 136, 157, 626, 978, 1235, 1627
FokI	GGATG	5 cut(s)	247, 296, 329, 497, 529
FriOI	GRGCYC	2 cut(s)	264, 1231
Fsp4HI	GCNGC	7 cut(s)	106, 136, 157, 626, 978, 1235, 1627
FspBI	CTAG	4 cut(s)	612, 879, 1020, 1505
GlaI	GCGC	4 cut(s)	15, 43, 118, 473
GluI	GCNGC	7 cut(s)	106, 136, 157, 626, 978, 1235, 1627
GsaI	CCCAGC	2 cut(s)	254, 1287
GsuI	CTGGAG	2 cut(s)	1245, 1748
HaeII	RGCGCY	3 cut(s)	45, 120, 475
HaeIII	GGCC	5 cut(s)	29, 68, 105, 159, 1098
HapII	CCGG	6 cut(s)	78, 89, 102, 389, 395, 422
HgaI	GACGC	1 cut(s)	1397
HhaI	GCGC	4 cut(s)	16, 44, 119, 474
Hin1I	GRCGYC	2 cut(s)	42, 117
Hin1II	CATG	5 cut(s)	464, 505, 694, 1012, 1387
Hin6I	GCGC	4 cut(s)	14, 42, 117, 472
HinP1I	GCGC	4 cut(s)	14, 42, 117, 472
HincII	GTYRAC	4 cut(s)	94, 124, 637, 1661
HindII	GTYRAC	4 cut(s)	94, 124, 637, 1661
HindIII	AAGCTT	2 cut(s)	854, 1046
HpaI	GTTAAC	1 cut(s)	637
HpaII	CCGG	6 cut(s)	78, 89, 102, 389, 395, 422
HphI	GGTGA	2 cut(s)	925, 1588
Hpy166II	GTNNAC	7 cut(s)	94, 124, 411, 637, 729, 1250, 1661
Hpy188I	TCNGA	9 cut(s)	50, 85, 174, 349, 357, 520, 688, 926, 1417
Hpy188III	TCNNGA	7 cut(s)	78, 584, 680, 740, 866, 1020, 1120
Hpy8I	GTNNAC	7 cut(s)	94, 124, 411, 637, 729, 1250, 1661
Hpy99I	CGWCG	3 cut(s)	125, 152, 155
HpyAV	CCTTC	3 cut(s)	582, 1412, 1567
HpyCH4III	ACNGT	5 cut(s)	383, 1033, 1145, 1159, 1665
HpyCH4IV	ACGT	2 cut(s)	594, 829
HpyCH4V	TGCA	8 cut(s)	241, 776, 860, 997, 1234, 1316, 1345, 1496
HpyF10VI	GCNNNNNNNGC	5 cut(s)	114, 247, 1508, 1607, 1689
HpyF3I	CTNAG	4 cut(s)	165, 517, 582, 1242
HpySE526I	ACGT	2 cut(s)	594, 829
Hsp92I	GRCGYC	2 cut(s)	42, 117
Hsp92II	CATG	5 cut(s)	464, 505, 694, 1012, 1387
HspAI	GCGC	4 cut(s)	14, 42, 117, 472
KasI	GGCGCC	2 cut(s)	41, 116
Kpn2I	TCCGGA	1 cut(s)	77
KroI	GCCGGC	1 cut(s)	101
KroNI	GCCGGC	1 cut(s)	103
KspAI	GTTAAC	1 cut(s)	637
Kzo9I	GATC	6 cut(s)	50, 80, 736, 1257, 1538, 1749
LmnI	GCTCC	2 cut(s)	887, 1226
Lsp1109I	GCAGC	3 cut(s)	964, 1246, 1613
LweI	GCATC	2 cut(s)	952, 1006
MaeI	CTAG	4 cut(s)	612, 879, 1020, 1505
MaeII	ACGT	2 cut(s)	594, 829
MalI	GATC	6 cut(s)	52, 82, 738, 1259, 1540, 1751
MboI	GATC	6 cut(s)	50, 80, 736, 1257, 1538, 1749
MboII	GAAGA	8 cut(s)	66, 121, 136, 177, 803, 1097, 1461, 1752
MfeI	CAATTG	2 cut(s)	1063, 1400
MflI	RGATCY	1 cut(s)	80
MhlI	GDGCHC	3 cut(s)	264, 605, 1231
MlsI	TGGCCA	1 cut(s)	29
MluCI	AATT	6 cut(s)	181, 403, 983, 1063, 1376, 1400
MluNI	TGGCCA	1 cut(s)	29
Mly113I	GGCGCC	2 cut(s)	42, 117
MlyI	GAGTC	2 cut(s)	692, 1282
MmeI	TCCRAC	4 cut(s)	108, 700, 1257, 1486
Mox20I	TGGCCA	1 cut(s)	29
MroI	TCCGGA	1 cut(s)	77
MroNI	GCCGGC	1 cut(s)	101
MscI	TGGCCA	1 cut(s)	29
MseI	TTAA	6 cut(s)	636, 663, 747, 1170, 1326, 1736
Msp20I	TGGCCA	1 cut(s)	29
MspA1I	CMGCKG	3 cut(s)	953, 1237, 1442
MspI	CCGG	6 cut(s)	78, 89, 102, 389, 395, 422
MspR9I	CCNGG	3 cut(s)	26, 89, 396
MunI	CAATTG	2 cut(s)	1063, 1400
MvaI	CCWGG	1 cut(s)	26
MvnI	CGCG	1 cut(s)	108
MwoI	GCNNNNNNNGC	5 cut(s)	114, 247, 1508, 1607, 1689
NaeI	GCCGGC	1 cut(s)	103
NarI	GGCGCC	2 cut(s)	42, 117
NciI	CCSGG	2 cut(s)	89, 396
NcoI	CCATGG	1 cut(s)	1008
NdeII	GATC	6 cut(s)	50, 80, 736, 1257, 1538, 1749
NgoMIV	GCCGGC	1 cut(s)	101
NlaIII	CATG	5 cut(s)	464, 505, 694, 1012, 1387
NlaIV	GGNNCC	7 cut(s)	43, 82, 118, 171, 393, 604, 825
NmeAIII	GCCGAG	1 cut(s)	18
NspV	TTCGAA	1 cut(s)	60
PcsI	WCGNNNNNNNCGW	2 cut(s)	66, 105
PdiI	GCCGGC	1 cut(s)	103
PfeI	GAWTC	8 cut(s)	202, 338, 446, 488, 568, 644, 1123, 1478
PflFI	GACNNNGTC	1 cut(s)	89
PfoI	TCCNGGA	1 cut(s)	394
PkrI	GCNGC	7 cut(s)	107, 137, 158, 627, 979, 1236, 1628
PleI	GAGTC	2 cut(s)	691, 1282
PluTI	GGCGCC	2 cut(s)	45, 120
PpsI	GAGTC	2 cut(s)	691, 1282
PshAI	GACNNNNGTC	1 cut(s)	1666
PsiI	TTATAA	1 cut(s)	279
Psp124BI	GAGCTC	2 cut(s)	264, 1231
Psp1406I	AACGTT	1 cut(s)	594
Psp6I	CCWGG	1 cut(s)	24
PspFI	CCCAGC	2 cut(s)	250, 1283
PspGI	CCWGG	1 cut(s)	24
PspN4I	GGNNCC	7 cut(s)	43, 82, 118, 171, 393, 604, 825
PspPI	GGNCC	1 cut(s)	1097
PstI	CTGCAG	2 cut(s)	1236, 1498
PstNI	CAGNNNCTG	1 cut(s)	686
PsuI	RGATCY	1 cut(s)	80
PsyI	GACNNNGTC	1 cut(s)	89
PvuII	CAGCTG	3 cut(s)	953, 1237, 1442
RsaI	GTAC	2 cut(s)	1370, 1523
RsaNI	GTAC	2 cut(s)	1369, 1522
SacI	GAGCTC	2 cut(s)	264, 1231
SalI	GTCGAC	2 cut(s)	122, 1659
SaqAI	TTAA	6 cut(s)	636, 663, 747, 1170, 1326, 1736
SatI	GCNGC	7 cut(s)	106, 136, 157, 626, 978, 1235, 1627
Sau3AI	GATC	6 cut(s)	50, 80, 736, 1257, 1538, 1749
Sau96I	GGNCC	1 cut(s)	1097
ScaI	AGTACT	1 cut(s)	1370
SchI	GAGTC	2 cut(s)	692, 1282
ScrFI	CCNGG	3 cut(s)	26, 89, 396
SduI	GDGCHC	3 cut(s)	264, 605, 1231
SfaNI	GCATC	2 cut(s)	952, 1006
SfcI	CTRYAG	4 cut(s)	492, 1232, 1494, 1554
SfoI	GGCGCC	2 cut(s)	43, 118
SfuI	TTCGAA	1 cut(s)	60
Sse9I	AATT	6 cut(s)	181, 403, 983, 1063, 1376, 1400
SsiI	CCGC	5 cut(s)	106, 133, 136, 156, 626
SspDI	GGCGCC	2 cut(s)	41, 116
SspMI	CTAG	4 cut(s)	612, 879, 1020, 1505
SstI	GAGCTC	2 cut(s)	264, 1231
StyD4I	CCNGG	3 cut(s)	24, 87, 394
StyI	CCWWGG	1 cut(s)	1008
TaaI	ACNGT	5 cut(s)	383, 1033, 1145, 1159, 1665
TaiI	ACGT	2 cut(s)	597, 832
TaqI	TCGA	5 cut(s)	60, 123, 147, 449, 1660
TasI	AATT	6 cut(s)	181, 403, 983, 1063, 1376, 1400
TatI	WGTACW	1 cut(s)	1368
TauI	GCSGC	4 cut(s)	108, 138, 159, 628
TfiI	GAWTC	8 cut(s)	202, 338, 446, 488, 568, 644, 1123, 1478
Tru1I	TTAA	6 cut(s)	636, 663, 747, 1170, 1326, 1736
Tru9I	TTAA	6 cut(s)	636, 663, 747, 1170, 1326, 1736
TscAI	CASTG	7 cut(s)	432, 1036, 1148, 1164, 1180, 1479, 1498
TseI	GCWGC	3 cut(s)	977, 1234, 1626
TspDTI	ATGAA	2 cut(s)	501, 707
TspGWI	ACGGA	1 cut(s)	580
TspRI	CASTG	7 cut(s)	432, 1036, 1148, 1164, 1180, 1479, 1498
Tth111I	GACNNNGTC	1 cut(s)	89
XagI	CCTNNNNNAGG	1 cut(s)	164
XapI	RAATTY	3 cut(s)	181, 403, 983
XbaI	TCTAGA	1 cut(s)	1019
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1280, 1696
XmiI	GTMKAC	2 cut(s)	123, 1660
XspI	CTAG	4 cut(s)	612, 879, 1020, 1505
ZrmI	AGTACT	1 cut(s)	1370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.