No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05220 |
| fragaria_vesca | FvH4_7g26070 |
| malus_domestica | MD01G1169200.v1.1 MD07G1235100.v1.1 |
| prunus_persica | Prupe.2G265400_v2.0.a1 |
| pyrus_communis | pycom01g18190 pycom07g21260 |
| rosa_chinensis | RchiOBHm_Chr1g0372481 |
| rosa_laevigata | RLG00000026895 |
| rosa_multiflora | Rmu_sc0005410.1_g000002 Rmu_sc0011709.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00284890 |
| rosa_rugosa | Rorug01G0372300.1 |
| rosa_samantha | Rh1AG380800 Rh1BG344400 Rh1CG357800 Rh1DG375600 |
| rosa_wichuraiana | Rw1G033500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 254 |
| AciI | CCGC | 8 cut(s) | 157, 170, 176, 186, 230, 242, 254, 291 |
| AclI | AACGTT | 1 cut(s) | 436 |
| AflII | CTTAAG | 1 cut(s) | 136 |
| AluBI | AGCT | 4 cut(s) | 7, 150, 313, 408 |
| AluI | AGCT | 4 cut(s) | 7, 150, 313, 408 |
| Alw21I | GWGCWC | 2 cut(s) | 9, 410 |
| Alw26I | GTCTC | 1 cut(s) | 183 |
| AspS9I | GGNCC | 1 cut(s) | 154 |
| AsuHPI | GGTGA | 1 cut(s) | 190 |
| AvaII | GGWCC | 1 cut(s) | 154 |
| BanII | GRGCYC | 3 cut(s) | 9, 391, 410 |
| BbsI | GAAGAC | 1 cut(s) | 357 |
| Bbv12I | GWGCWC | 2 cut(s) | 9, 410 |
| BccI | CCATC | 1 cut(s) | 56 |
| BcoDI | GTCTC | 1 cut(s) | 183 |
| BfaI | CTAG | 1 cut(s) | 411 |
| BfrI | CTTAAG | 1 cut(s) | 136 |
| Bme18I | GGWCC | 1 cut(s) | 154 |
| BmgT120I | GGNCC | 1 cut(s) | 154 |
| BmsI | GCATC | 1 cut(s) | 188 |
| BpiI | GAAGAC | 1 cut(s) | 357 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 185, 217 |
| BpmI | CTGGAG | 1 cut(s) | 338 |
| BpuEI | CTTGAG | 1 cut(s) | 413 |
| BsaJI | CCNNGG | 2 cut(s) | 124, 207 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 218, 248 |
| Bse1I | ACTGG | 1 cut(s) | 119 |
| BseDI | CCNNGG | 2 cut(s) | 124, 207 |
| BseGI | GGATG | 3 cut(s) | 48, 203, 267 |
| BseNI | ACTGG | 1 cut(s) | 119 |
| BsiHKAI | GWGCWC | 2 cut(s) | 9, 410 |
| BsmAI | GTCTC | 1 cut(s) | 183 |
| BsmBI | CGTCTC | 1 cut(s) | 183 |
| Bsp1286I | GDGCHC | 3 cut(s) | 9, 391, 410 |
| Bsp143I | GATC | 2 cut(s) | 132, 339 |
| Bsp19I | CCATGG | 1 cut(s) | 124 |
| BspACI | CCGC | 8 cut(s) | 157, 170, 176, 186, 230, 242, 254, 291 |
| BspTI | CTTAAG | 1 cut(s) | 136 |
| BsrBI | CCGCTC | 1 cut(s) | 254 |
| BsrI | ACTGG | 1 cut(s) | 119 |
| BssECI | CCNNGG | 2 cut(s) | 124, 207 |
| BssMI | GATC | 2 cut(s) | 132, 339 |
| BssT1I | CCWWGG | 1 cut(s) | 124 |
| BstAFI | CTTAAG | 1 cut(s) | 136 |
| BstDEI | CTNAG | 1 cut(s) | 107 |
| BstDSI | CCRYGG | 1 cut(s) | 124 |
| BstF5I | GGATG | 3 cut(s) | 48, 203, 267 |
| BstKTI | GATC | 2 cut(s) | 135, 342 |
| BstMAI | GTCTC | 1 cut(s) | 183 |
| BstMBI | GATC | 2 cut(s) | 132, 339 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 156, 288 |
| BstV2I | GAAGAC | 1 cut(s) | 357 |
| BtgI | CCRYGG | 1 cut(s) | 124 |
| BtsCI | GGATG | 3 cut(s) | 48, 203, 267 |
| Cfr13I | GGNCC | 1 cut(s) | 154 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 192, 227 |
| CviAII | CATG | 2 cut(s) | 125, 343 |
| CviJI | RGCY | 7 cut(s) | 7, 68, 150, 313, 389, 408, 425 |
| CviKI_1 | RGCY | 7 cut(s) | 7, 68, 150, 313, 389, 408, 425 |
| DdeI | CTNAG | 1 cut(s) | 107 |
| DpnI | GATC | 2 cut(s) | 134, 341 |
| DpnII | GATC | 2 cut(s) | 132, 339 |
| EciI | GGCGGA | 2 cut(s) | 245, 257 |
| Ecl136II | GAGCTC | 2 cut(s) | 7, 408 |
| Eco130I | CCWWGG | 1 cut(s) | 124 |
| Eco24I | GRGCYC | 3 cut(s) | 9, 391, 410 |
| Eco47I | GGWCC | 1 cut(s) | 154 |
| Eco53kI | GAGCTC | 2 cut(s) | 7, 408 |
| EcoICRI | GAGCTC | 2 cut(s) | 7, 408 |
| EcoT14I | CCWWGG | 1 cut(s) | 124 |
| EcoT38I | GRGCYC | 3 cut(s) | 9, 391, 410 |
| ErhI | CCWWGG | 1 cut(s) | 124 |
| Esp3I | CGTCTC | 1 cut(s) | 183 |
| FaeI | CATG | 2 cut(s) | 128, 346 |
| FaiI | YATR | 2 cut(s) | 126, 344 |
| FatI | CATG | 2 cut(s) | 124, 342 |
| FokI | GGATG | 3 cut(s) | 35, 210, 274 |
| FriOI | GRGCYC | 3 cut(s) | 9, 391, 410 |
| FspBI | CTAG | 1 cut(s) | 411 |
| GsuI | CTGGAG | 1 cut(s) | 338 |
| Hin1II | CATG | 2 cut(s) | 128, 346 |
| HindIII | AAGCTT | 1 cut(s) | 148 |
| HphI | GGTGA | 1 cut(s) | 190 |
| Hpy188I | TCNGA | 1 cut(s) | 104 |
| Hpy188III | TCNNGA | 2 cut(s) | 317, 447 |
| Hpy99I | CGWCG | 1 cut(s) | 374 |
| HpyAV | CCTTC | 5 cut(s) | 54, 242, 263, 350, 378 |
| HpyCH4IV | ACGT | 1 cut(s) | 436 |
| HpyCH4V | TGCA | 1 cut(s) | 80 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 156, 288 |
| HpyF3I | CTNAG | 1 cut(s) | 107 |
| HpySE526I | ACGT | 1 cut(s) | 436 |
| Hsp92II | CATG | 2 cut(s) | 128, 346 |
| Kzo9I | GATC | 2 cut(s) | 132, 339 |
| LmnI | GCTCC | 5 cut(s) | 4, 251, 279, 310, 328 |
| LpnPI | CCDG | 6 cut(s) | 90, 100, 128, 152, 302, 407 |
| LweI | GCATC | 1 cut(s) | 188 |
| MaeI | CTAG | 1 cut(s) | 411 |
| MaeII | ACGT | 1 cut(s) | 436 |
| MalI | GATC | 2 cut(s) | 134, 341 |
| MbiI | CCGCTC | 1 cut(s) | 254 |
| MboI | GATC | 2 cut(s) | 132, 339 |
| MboII | GAAGA | 2 cut(s) | 257, 362 |
| MhlI | GDGCHC | 3 cut(s) | 9, 391, 410 |
| MluCI | AATT | 1 cut(s) | 91 |
| MmeI | TCCRAC | 1 cut(s) | 204 |
| MnlI | CCTC | 9 cut(s) | 62, 174, 187, 202, 220, 231, 258, 267, 328 |
| MseI | TTAA | 1 cut(s) | 137 |
| MspCI | CTTAAG | 1 cut(s) | 136 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 156, 288 |
| NcoI | CCATGG | 1 cut(s) | 124 |
| NdeII | GATC | 2 cut(s) | 132, 339 |
| NlaIII | CATG | 2 cut(s) | 128, 346 |
| Psp124BI | GAGCTC | 2 cut(s) | 9, 410 |
| Psp1406I | AACGTT | 1 cut(s) | 436 |
| PspPI | GGNCC | 1 cut(s) | 154 |
| SacI | GAGCTC | 2 cut(s) | 9, 410 |
| SaqAI | TTAA | 1 cut(s) | 137 |
| Sau3AI | GATC | 2 cut(s) | 132, 339 |
| Sau96I | GGNCC | 1 cut(s) | 154 |
| SduI | GDGCHC | 3 cut(s) | 9, 391, 410 |
| SetI | ASST | 8 cut(s) | 9, 152, 185, 213, 278, 315, 410, 439 |
| SfaNI | GCATC | 1 cut(s) | 188 |
| SinI | GGWCC | 1 cut(s) | 154 |
| SmlI | CTYRAG | 2 cut(s) | 136, 428 |
| SmoI | CTYRAG | 2 cut(s) | 136, 428 |
| Sse9I | AATT | 1 cut(s) | 91 |
| SsiI | CCGC | 8 cut(s) | 157, 170, 176, 186, 230, 242, 254, 291 |
| SspI | AATATT | 1 cut(s) | 396 |
| SspMI | CTAG | 1 cut(s) | 411 |
| SstI | GAGCTC | 2 cut(s) | 9, 410 |
| StyI | CCWWGG | 1 cut(s) | 124 |
| TaiI | ACGT | 1 cut(s) | 439 |
| TasI | AATT | 1 cut(s) | 91 |
| Tru1I | TTAA | 1 cut(s) | 137 |
| Tru9I | TTAA | 1 cut(s) | 137 |
| Vha464I | CTTAAG | 1 cut(s) | 136 |
| VpaK11BI | GGWCC | 1 cut(s) | 154 |
| XspI | CTAG | 1 cut(s) | 411 |