No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05220 |
| fragaria_vesca | FvH4_7g26070 |
| malus_domestica | MD01G1169200.v1.1 MD07G1235100.v1.1 |
| prunus_persica | Prupe.2G265400_v2.0.a1 |
| pyrus_communis | pycom01g18190 pycom07g21260 |
| rosa_chinensis | RchiOBHm_Chr1g0372481 |
| rosa_laevigata | RLG00000026895 |
| rosa_multiflora | Rmu_sc0005410.1_g000002 Rmu_sc0011709.1_g000007 |
| rosa_roxburghii | Rroxscaffold_4G00284890 |
| rosa_rugosa | Rorug01G0372300.1 |
| rosa_samantha | Rh1AG380800 Rh1BG344400 Rh1CG357800 Rh1DG375600 |
| rosa_wichuraiana | Rw1G033500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 208 |
| AcsI | RAATTY | 1 cut(s) | 5 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 281 |
| AgsI | TTSAA | 2 cut(s) | 78, 225 |
| AluBI | AGCT | 4 cut(s) | 153, 191, 287, 352 |
| AluI | AGCT | 4 cut(s) | 153, 191, 287, 352 |
| Alw26I | GTCTC | 1 cut(s) | 309 |
| ApoI | RAATTY | 1 cut(s) | 5 |
| AspLEI | GCGC | 2 cut(s) | 209, 479 |
| AspS9I | GGNCC | 1 cut(s) | 120 |
| AvaII | GGWCC | 1 cut(s) | 120 |
| BanII | GRGCYC | 1 cut(s) | 430 |
| BccI | CCATC | 1 cut(s) | 226 |
| BceAI | ACGGC | 1 cut(s) | 329 |
| BcoDI | GTCTC | 1 cut(s) | 309 |
| Bme18I | GGWCC | 1 cut(s) | 120 |
| BmgT120I | GGNCC | 1 cut(s) | 120 |
| BmiI | GGNNCC | 1 cut(s) | 343 |
| BmsI | GCATC | 3 cut(s) | 155, 194, 258 |
| BpmI | CTGGAG | 1 cut(s) | 278 |
| BsaJI | CCNNGG | 1 cut(s) | 345 |
| BsaWI | WCCGGW | 1 cut(s) | 274 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 330, 360 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 281 |
| Bse1I | ACTGG | 2 cut(s) | 123, 261 |
| BseDI | CCNNGG | 1 cut(s) | 345 |
| BseGI | GGATG | 2 cut(s) | 209, 237 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BseMII | CTCAG | 3 cut(s) | 255, 279, 302 |
| BseNI | ACTGG | 2 cut(s) | 123, 261 |
| BseRI | GAGGAG | 3 cut(s) | 342, 351, 354 |
| Bsh1285I | CGRYCG | 1 cut(s) | 275 |
| BsiEI | CGRYCG | 1 cut(s) | 275 |
| BsiSI | CCGG | 2 cut(s) | 143, 275 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 281 |
| BsmAI | GTCTC | 1 cut(s) | 309 |
| BsmI | GAATGC | 1 cut(s) | 31 |
| Bsp1286I | GDGCHC | 1 cut(s) | 430 |
| Bsp143I | GATC | 1 cut(s) | 185 |
| BspCNI | CTCAG | 3 cut(s) | 256, 280, 303 |
| BspLI | GGNNCC | 1 cut(s) | 343 |
| BsrI | ACTGG | 2 cut(s) | 123, 261 |
| BssECI | CCNNGG | 1 cut(s) | 345 |
| BssMI | GATC | 1 cut(s) | 185 |
| BstC8I | GCNNGC | 2 cut(s) | 238, 308 |
| BstDEI | CTNAG | 4 cut(s) | 264, 288, 311, 467 |
| BstDSI | CCRYGG | 1 cut(s) | 345 |
| BstF5I | GGATG | 2 cut(s) | 209, 237 |
| BstHHI | GCGC | 2 cut(s) | 209, 479 |
| BstKTI | GATC | 1 cut(s) | 188 |
| BstMAI | GTCTC | 1 cut(s) | 309 |
| BstMBI | GATC | 1 cut(s) | 185 |
| BstMCI | CGRYCG | 1 cut(s) | 275 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 96 |
| BtgI | CCRYGG | 1 cut(s) | 345 |
| BtsCI | GGATG | 2 cut(s) | 209, 237 |
| Cac8I | GCNNGC | 2 cut(s) | 238, 308 |
| CfoI | GCGC | 2 cut(s) | 209, 479 |
| Cfr13I | GGNCC | 1 cut(s) | 120 |
| CviAII | CATG | 3 cut(s) | 87, 382, 461 |
| CviJI | RGCY | 9 cut(s) | 99, 153, 191, 263, 287, 310, 344, 352, 428 |
| CviKI_1 | RGCY | 9 cut(s) | 99, 153, 191, 263, 287, 310, 344, 352, 428 |
| DdeI | CTNAG | 4 cut(s) | 264, 288, 311, 467 |
| DpnI | GATC | 1 cut(s) | 187 |
| DpnII | GATC | 1 cut(s) | 185 |
| Eco24I | GRGCYC | 1 cut(s) | 430 |
| Eco47I | GGWCC | 1 cut(s) | 120 |
| EcoT38I | GRGCYC | 1 cut(s) | 430 |
| FaeI | CATG | 3 cut(s) | 90, 385, 464 |
| FaiI | YATR | 6 cut(s) | 56, 58, 88, 180, 383, 462 |
| FatI | CATG | 3 cut(s) | 86, 381, 460 |
| FauNDI | CATATG | 1 cut(s) | 56 |
| FokI | GGATG | 2 cut(s) | 216, 244 |
| FriOI | GRGCYC | 1 cut(s) | 430 |
| FspI | TGCGCA | 1 cut(s) | 208 |
| GlaI | GCGC | 2 cut(s) | 208, 478 |
| GsuI | CTGGAG | 1 cut(s) | 278 |
| HapII | CCGG | 2 cut(s) | 143, 275 |
| HhaI | GCGC | 2 cut(s) | 209, 479 |
| Hin1II | CATG | 3 cut(s) | 90, 385, 464 |
| Hin6I | GCGC | 2 cut(s) | 207, 477 |
| HinP1I | GCGC | 2 cut(s) | 207, 477 |
| HindIII | AAGCTT | 1 cut(s) | 151 |
| HpaII | CCGG | 2 cut(s) | 143, 275 |
| Hpy188I | TCNGA | 1 cut(s) | 108 |
| HpyAV | CCTTC | 2 cut(s) | 84, 275 |
| HpyCH4V | TGCA | 4 cut(s) | 29, 60, 160, 449 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 96 |
| HpyF3I | CTNAG | 4 cut(s) | 264, 288, 311, 467 |
| Hsp92II | CATG | 3 cut(s) | 90, 385, 464 |
| HspAI | GCGC | 2 cut(s) | 207, 477 |
| Kzo9I | GATC | 1 cut(s) | 185 |
| LmnI | GCTCC | 3 cut(s) | 284, 341, 349 |
| LpnPI | CCDG | 9 cut(s) | 136, 156, 213, 222, 242, 288, 292, 406, 420 |
| LweI | GCATC | 3 cut(s) | 155, 194, 258 |
| MaeIII | GTNAC | 1 cut(s) | 173 |
| MalI | GATC | 1 cut(s) | 187 |
| MboI | GATC | 1 cut(s) | 185 |
| MboII | GAAGA | 3 cut(s) | 290, 401, 427 |
| MhlI | GDGCHC | 1 cut(s) | 430 |
| MluCI | AATT | 1 cut(s) | 5 |
| MmeI | TCCRAC | 1 cut(s) | 336 |
| MnlI | CCTC | 9 cut(s) | 111, 111, 253, 320, 323, 329, 332, 388, 417 |
| MseI | TTAA | 1 cut(s) | 155 |
| MslI | CAYNNNNRTG | 1 cut(s) | 24 |
| MspA1I | CMGCKG | 1 cut(s) | 191 |
| MspI | CCGG | 2 cut(s) | 143, 275 |
| Mva1269I | GAATGC | 1 cut(s) | 31 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 96 |
| NdeI | CATATG | 1 cut(s) | 56 |
| NdeII | GATC | 1 cut(s) | 185 |
| NlaIII | CATG | 3 cut(s) | 90, 385, 464 |
| NlaIV | GGNNCC | 1 cut(s) | 343 |
| NmuCI | GTSAC | 1 cut(s) | 173 |
| NsbI | TGCGCA | 1 cut(s) | 208 |
| PctI | GAATGC | 1 cut(s) | 31 |
| PspN4I | GGNNCC | 1 cut(s) | 343 |
| PspPI | GGNCC | 1 cut(s) | 120 |
| PvuII | CAGCTG | 1 cut(s) | 191 |
| RseI | CAYNNNNRTG | 1 cut(s) | 24 |
| SaqAI | TTAA | 1 cut(s) | 155 |
| Sau3AI | GATC | 1 cut(s) | 185 |
| Sau96I | GGNCC | 1 cut(s) | 120 |
| SduI | GDGCHC | 1 cut(s) | 430 |
| SetI | ASST | 4 cut(s) | 155, 193, 289, 354 |
| SfaNI | GCATC | 3 cut(s) | 155, 194, 258 |
| SinI | GGWCC | 1 cut(s) | 120 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 24 |
| Sse9I | AATT | 1 cut(s) | 5 |
| TaqI | TCGA | 1 cut(s) | 116 |
| TasI | AATT | 1 cut(s) | 5 |
| Tru1I | TTAA | 1 cut(s) | 155 |
| Tru9I | TTAA | 1 cut(s) | 155 |
| TseFI | GTSAC | 1 cut(s) | 173 |
| Tsp45I | GTSAC | 1 cut(s) | 173 |
| VpaK11BI | GGWCC | 1 cut(s) | 120 |
| XapI | RAATTY | 1 cut(s) | 5 |