MD08G1060700.v1.1

ATP hydrolysis coupled proton transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0010725
Physical Location & Seq
Reverse (-)
4825099 .. 4825284
186 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1060700.v1.1.491

Sequence Viewer

Length: 186 bp
ATGAAAGTGGATCAGTTTCGAATTATTGGATATTCTAAAATAGAACAAGAAAAATTGAATATGATTAATTCCACTTATAAGACTTTGGAACAATTAGAAAATTACAAAAACGAAACCATTCATTTTGAACAACAAAAGGCGATTAATCAAGTTAGACAACGGGTTTTTCAGCAAGCCTTACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0015985 GO:0015986 GO:0016020 GO:0016462 GO:0016469 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0031976 GO:0031984 GO:0032991 GO:0033177 GO:0034220 GO:0034357 GO:0034641 GO:0034654 GO:0042623 GO:0042625 GO:0042626 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0044769 GO:0045259 GO:0045263 GO:0046034 GO:0046390 GO:0046483 GO:0046933 GO:0051179 GO:0051234 GO:0055035 GO:0055085 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098796 GO:0099131 GO:0099132 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 ko00195 ko01100 ko03010 ko04142 ko04145 ko04721 ko04966 ko05110 ko05120 ko05152 ko05323 map00190 map00195 map01100 map03010 map04142 map04145 map04721 map04966 map05110 map05120 map05152 map05323
Pfam Domains
Protein Families
ATP-synt_C ATP-synt_ab ATP-synt_ab_C ATP-synt_ab_N

Protein Analysis

62

Amino Acids

7.43

Weight (kDa)

9.1

Isoelectric Point (pI)

33.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ATP-synt_B PF00430 11 - 61 1.3e-07 ATP synthase B/B' CF(0)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 78
AclWI GGATC 1 cut(s) 18
AgsI TTSAA 2 cut(s) 58, 128
AlwI GGATC 1 cut(s) 18
AseI ATTAAT 2 cut(s) 66, 144
Asp700I GAANNNNTTC 1 cut(s) 117
AsuII TTCGAA 1 cut(s) 19
Bpu14I TTCGAA 1 cut(s) 19
Bsp119I TTCGAA 1 cut(s) 19
Bsp143I GATC 1 cut(s) 10
BspPI GGATC 1 cut(s) 18
BspT104I TTCGAA 1 cut(s) 19
BssMI GATC 1 cut(s) 10
BstBI TTCGAA 1 cut(s) 19
BstC8I GCNNGC 1 cut(s) 174
BstKTI GATC 1 cut(s) 13
BstMBI GATC 1 cut(s) 10
Cac8I GCNNGC 1 cut(s) 174
CviJI RGCY 1 cut(s) 176
CviKI_1 RGCY 1 cut(s) 176
DpnI GATC 1 cut(s) 12
DpnII GATC 1 cut(s) 10
FaiI YATR 2 cut(s) 62, 78
FspEI CC 7 cut(s) 12, 71, 85, 122, 130, 145, 146
Kzo9I GATC 1 cut(s) 10
MalI GATC 1 cut(s) 12
MboI GATC 1 cut(s) 10
MluCI AATT 5 cut(s) 21, 53, 67, 92, 100
MroXI GAANNNNTTC 1 cut(s) 117
MseI TTAA 2 cut(s) 66, 144
NdeII GATC 1 cut(s) 10
NspV TTCGAA 1 cut(s) 19
PdmI GAANNNNTTC 1 cut(s) 117
PshBI ATTAAT 2 cut(s) 66, 144
PsiI TTATAA 1 cut(s) 78
SaqAI TTAA 2 cut(s) 66, 144
Sau3AI GATC 1 cut(s) 10
SfuI TTCGAA 1 cut(s) 19
SgeI CNNG 3 cut(s) 59, 161, 173
Sse9I AATT 5 cut(s) 21, 53, 67, 92, 100
TaqI TCGA 1 cut(s) 19
TasI AATT 5 cut(s) 21, 53, 67, 92, 100
Tru1I TTAA 2 cut(s) 66, 144
Tru9I TTAA 2 cut(s) 66, 144
TspDTI ATGAA 2 cut(s) 17, 110
VspI ATTAAT 2 cut(s) 66, 144
XmnI GAANNNNTTC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.