Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0007349

Physical Location & Seq

Genomic Coordinates Reverse (-)

10695971 .. 10702612

Gene Structure 6642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1116900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2106 bp

ATGGTGAATTATCTTGTGGAACGCGCCACGAGCGACATGCTCATCGGTCCTGATTGGGCCATGAACATCGAAATCTGTGATATATGCAACCACGACCCTGTGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGCCTTGGAAGTAAGAATTCAAAAGTTCAACTTCTTGCCCTTACACTGTTGGAAACAATAATAAAGAATTGTGGAGACATTGTTCATATGCATGTTGCAGAGAAAGACCTCCTCCATGATATGGTTAGAATAGTAAAAAAGAAGCCGGACTATCATGTCAAAGATAAGATATTGATCCTGATAGATACCTGGCAAGAAGCTTTTGGGGGGCCGAGAGCAAGATATCCACAATACTATGCTGCATACCAGGATTTGTTGCGTTCTGGAGCAGTATTCCCTCAAAGATCCGAGTCATCTGCGCCTGTATTCACACCACCCCAGACACAGCCATTGACAGCATATCCTCAGAATTTGCAAGATCCAGATCGTCCAAAAGATGTAGCTGAGCCTTCTGCAGAGGCTGAGTTCCCAACCTTAAGTTTGACGGAACTTCAGAATGCAAAGGGTATCATGGATGTCCTGGCAGAAATGCTAAGTGCCATAGATAACAAAGAGGGGCTTAGGCAGGAGGTGATTATTGATTTGGTTGACCAGTGCCGTACATATAAGCAGAGAGTGGTACACCTTGTAAACTCGACTTCGGATGAATCACTTCTATGTCAAGGACTAGCGCTGAATGATGACTTGCAACGTCTTCTAGCCAAGCATGAAGCCATTGCTTCGGGAAATCCAGTTCAGCCAGATAAACCTAAGCCTGCAGCTAATGGAGCGCTTGTAGATGTTGGTGGTCCTCTAGTGGACACTGGAAATGACAACAAACAGCCTGATGGGAGATCCGTCTCAAGTTCTGGTTCCGGTGCTAATCCACTTAATCAGTTATTGCTTACTGCCCCTCCAGCTACTAATGGTTCAACTTCTATTGCAAAGGTTGATCCCAGGATGGATCTTCTTAGCGGGGATGACTTTGGCTTACCAAAGGCAGATGCTTCACTGGCTCTTGTTCCCGTGGGAGAACAACAGCCAACTACTCCTGTTTCTCAGCAGAATGCCCTTGCTCTTATGGACATGTTTGGCACCGAGAGTGTCCCAAACCCTGTGAATACCCATCCTGCTAATGCAGCCAGCCAACCCAATCCTTCACCCCCACAATTCCCACAGCAGCAGAATTTTCAATCTCCACAAGGAGGATTTCTCCCAAATGGAAATGCCCCAATCATGGGGGTCCCTCAGTATGAGCAGTCTCCGTTTGCACAAGGTGCTGCTCCTGCATGGAATGGTCAGATGGTTCAGTCGCAACCACTGCAGCAGCAGCCGCTTTCGCCAGGCTATGGTTCACCAACCAGTGGATCGTTGCCAGCACCTCCCTGGGAAGCTCAGTCAATAGATGATGGCAGTCCAGTAGCAGGTTCTCGATTCTCTCCACCCCCGCTGCAAGTTACTACCAAGGTGGTGGTCAGTGCACCGGGTGGTTTCCATCCCCAGGGTCCTCAAAGCGACCAGGTTGTAGGTATGTATATTCAGCCAATTACAACCACCCATTTGTCAACAATCAATAACCAAGTTGGTCCAAGCAGTCATTTGGGTTTGCCCTCTCAACCGGCCCAAGGGCCATATACGGGTATGACTCCACAAGCTATTCAAGCAGGTCAGATGACATCCATGCATCCTCAACAAATGTATGGTGGTAATCAATTTGTCCCCTATGGCTACGATCAGCAACAGCACCCGCATCAAGCGTATGCCCTTCAGCAACAGCAATATCAACATCAGCAAGCATACGCCCTTCAGCAACAGCAACATCAAGCGTACGCCCTTCAGCAACAGCAACAACAGCAATATGCCCTTCAGCAGCAAATGTACGGTCTTTCTGTTAACGATAATGGTCTGAAAAACCCCTACCAGGTTTCCGCGCCATCTTATGTTCCTCCAAGCAGGCCATCTAGGCCAGAGGATAAACTTTTCGGAGACCTCGTTGACTTTGCAAAACTCAAGCCAACAAAACCGACGTCTGGTGCAGCTGGTAGCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006464 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006635 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0015031 GO:0015833 GO:0015919 GO:0016042 GO:0016043 GO:0016054 GO:0016558 GO:0016567 GO:0016740 GO:0017038 GO:0019395 GO:0019538 GO:0019752 GO:0019787 GO:0019899 GO:0030258 GO:0031625 GO:0032446 GO:0032787 GO:0033036 GO:0033365 GO:0034440 GO:0034613 GO:0036211 GO:0042886 GO:0043170 GO:0043412 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044282 GO:0044389 GO:0044424 GO:0044464 GO:0044743 GO:0045184 GO:0046395 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0055114 GO:0061630 GO:0061659 GO:0065002 GO:0070647 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0072329 GO:0072594 GO:0072662 GO:0072663 GO:0140096 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

702

Amino Acids

75.8

Weight (kDa)

5.5

Isoelectric Point (pI)

55.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VHS	PF00790	2 - 128	1.2e-31	VHS domain
GAT	PF03127	196 - 267	1.1e-16	GAT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32760 AT4G32760 AT4G32760
fragaria_vesca	FvH4_2g35970 FvH4_2g35970 FvH4_2g35970 FvH4_2g35970 FvH4_2g35970
malus_domestica	MD08G1116900.v1.1 MD15G1096400.v1.1
prunus_persica	Prupe.1G451300_v2.0.a1 Prupe.1G451300_v2.0.a1
pyrus_communis	pycom08g09740 pycom15g08850
rosa_chinensis	RchiOBHm_Chr6g0305901
rosa_laevigata	RLG00000010848
rosa_multiflora	Rmu_sc0001809.1_g000047
rosa_roxburghii	Rroxscaffold_7G00162230
rosa_rugosa	Rorug06G0344900 Rorug06G0345000
rosa_samantha	Rh6AG456700 Rh6BG444600 Rh6CG470600 Rh6DG457300
rosa_wichuraiana	Rw6G039840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	290
AatII	GACGTC	1 cut(s)	2084
Acc36I	ACCTGC	2 cut(s)	1469, 1709
AccB1I	GGYRCC	1 cut(s)	1148
AccB7I	CCANNNNNTGG	3 cut(s)	256, 1403, 1418
AccII	CGCG	2 cut(s)	24, 1985
AciI	CCGC	5 cut(s)	1029, 1388, 1502, 1802, 1983
AclWI	GGATC	7 cut(s)	304, 414, 488, 903, 1001, 1026, 1429
AcsI	RAATTY	3 cut(s)	151, 484, 1240
AcuI	CTGAAG	5 cut(s)	551, 1805, 1844, 1874, 1904
AcyI	GRCGYC	1 cut(s)	2081
AdeI	CACNNNGTG	2 cut(s)	1331, 1541
AfaI	GTAC	4 cut(s)	676, 696, 1883, 1934
AfeI	AGCGCT	2 cut(s)	747, 846
AflII	CTTAAG	1 cut(s)	550
AflIII	ACRYGT	1 cut(s)	1140
AgsI	TTSAA	5 cut(s)	156, 164, 987, 1247, 1715
AjnI	CCWGG	9 cut(s)	323, 381, 594, 1010, 1396, 1439, 1554, 1572, 1974
AloI	GAACNNNNNNTCC	4 cut(s)	201, 233, 792, 824
AluBI	AGCT	7 cut(s)	335, 518, 836, 974, 1448, 1709, 2093
AluI	AGCT	7 cut(s)	335, 518, 836, 974, 1448, 1709, 2093
Alw21I	GWGCWC	1 cut(s)	1537
Alw26I	GTCTC	4 cut(s)	204, 919, 1320, 2034
Alw44I	GTGCAC	1 cut(s)	1533
AlwI	GGATC	7 cut(s)	304, 414, 488, 903, 1001, 1026, 1429
AlwNI	CAGNNNCTG	1 cut(s)	536
Aor51HI	AGCGCT	2 cut(s)	747, 846
AoxI	GGCC	6 cut(s)	57, 344, 1674, 1682, 2009, 2018
ApaLI	GTGCAC	1 cut(s)	1533
ApoI	RAATTY	3 cut(s)	151, 484, 1240
ArsI	GACNNNNNNTTYG	4 cut(s)	1921, 1953, 2066, 2098
Asp700I	GAANNNNTTC	1 cut(s)	726
AspLEI	GCGC	6 cut(s)	26, 138, 436, 748, 847, 1987
AspS9I	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1559, 1640, 1675, 1682
AsuC2I	CCSGG	1 cut(s)	1539
AsuHPI	GGTGA	4 cut(s)	16, 658, 1206, 1401
AvaII	GGWCC	5 cut(s)	47, 863, 1297, 1559, 1640
BaeGI	GKGCMC	1 cut(s)	1537
BanI	GGYRCC	1 cut(s)	1148
BauI	CACGAG	1 cut(s)	28
BbsI	GAAGAC	1 cut(s)	761
Bbv12I	GWGCWC	1 cut(s)	1537
BccI	CCATC	8 cut(s)	896, 1009, 1188, 1351, 1457, 1557, 1996, 2020
BceAI	ACGGC	1 cut(s)	657
BcgI	CGANNNNNNTGC	4 cut(s)	19, 53, 413, 447
BciT130I	CCWGG	9 cut(s)	325, 383, 596, 1012, 1398, 1441, 1556, 1574, 1976
BcnI	CCSGG	1 cut(s)	1539
BcoDI	GTCTC	4 cut(s)	204, 919, 1320, 2034
BfaI	CTAG	4 cut(s)	743, 773, 869, 2016
BfmI	CTRYAG	3 cut(s)	528, 831, 1376
BfoI	RGCGCY	3 cut(s)	139, 749, 848
BfrI	CTTAAG	1 cut(s)	550
BfuAI	ACCTGC	2 cut(s)	1469, 1709
BglI	GCCNNNNNGGC	1 cut(s)	2017
BlpI	GCTNAGC	1 cut(s)	519
Bme18I	GGWCC	5 cut(s)	47, 863, 1297, 1559, 1640
BmgT120I	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1559, 1640, 1675, 1682
BmiI	GGNNCC	6 cut(s)	345, 928, 1150, 1298, 1299, 1560
BmsI	GCATC	3 cut(s)	1048, 1747, 1813
BpiI	GAAGAC	1 cut(s)	761
BplI	GAGNNNNNCTC	2 cut(s)	1251, 1283
BpmI	CTGGAG	2 cut(s)	420, 954
Bpu10I	CCTNAGC	2 cut(s)	635, 825
Bpu1102I	GCTNAGC	1 cut(s)	519
BpuEI	CTTGAG	2 cut(s)	901, 2048
BpuMI	CCSGG	1 cut(s)	1539
BsaBI	GATNNNNATC	2 cut(s)	308, 498
BsaHI	GRCGYC	1 cut(s)	2081
BsaI	GGTCTC	1 cut(s)	2034
BsaJI	CCNNGG	9 cut(s)	139, 1010, 1080, 1439, 1440, 1518, 1554, 1555, 1678
BsaWI	WCCGGW	1 cut(s)	929
BsaXI	ACNNNNNCTCC	8 cut(s)	201, 231, 834, 864, 952, 982, 2031, 2061
Bse118I	RCCGGY	1 cut(s)	1672
Bse1I	ACTGG	6 cut(s)	667, 806, 883, 1071, 1416, 1472
Bse3DI	GCAATG	1 cut(s)	789
Bse8I	GATNNNNATC	2 cut(s)	308, 498
BseBI	CCWGG	9 cut(s)	325, 383, 596, 1012, 1398, 1441, 1556, 1574, 1976
BseDI	CCNNGG	9 cut(s)	139, 1010, 1080, 1439, 1440, 1518, 1554, 1555, 1678
BseGI	GGATG	9 cut(s)	118, 595, 724, 1020, 1039, 1180, 1549, 1730, 1738
BseJI	GATNNNNATC	2 cut(s)	308, 498
BseMI	GCAATG	1 cut(s)	789
BseMII	CTCAG	6 cut(s)	494, 510, 528, 1127, 1316, 1463
BseNI	ACTGG	6 cut(s)	667, 806, 883, 1071, 1416, 1472
BseRI	GAGGAG	1 cut(s)	236
BseSI	GKGCMC	1 cut(s)	1537
Bsh1236I	CGCG	2 cut(s)	24, 1985
BshFI	GGCC	6 cut(s)	59, 346, 1676, 1684, 2011, 2020
BshNI	GGYRCC	1 cut(s)	1148
BsiHKAI	GWGCWC	1 cut(s)	1537
BsiSI	CCGG	4 cut(s)	281, 930, 1538, 1673
BsiWI	CGTACG	1 cut(s)	1881
BslFI	GGGAC	3 cut(s)	1145, 1283, 1757
BsmAI	GTCTC	4 cut(s)	204, 919, 1320, 2034
BsmBI	CGTCTC	1 cut(s)	919
BsmFI	GGGAC	3 cut(s)	1145, 1283, 1757
BsmI	GAATGC	2 cut(s)	577, 1126
BsnI	GGCC	6 cut(s)	59, 346, 1676, 1684, 2011, 2020
Bso31I	GGTCTC	1 cut(s)	2034
Bsp1286I	GDGCHC	1 cut(s)	1537
Bsp143I	GATC	9 cut(s)	309, 419, 493, 499, 908, 1006, 1018, 1421, 1786
Bsp1720I	GCTNAGC	1 cut(s)	519
BspACI	CCGC	5 cut(s)	1029, 1388, 1502, 1802, 1983
BspANI	GGCC	6 cut(s)	59, 346, 1676, 1684, 2011, 2020
BspCNI	CTCAG	6 cut(s)	493, 511, 529, 1126, 1315, 1462
BspFNI	CGCG	2 cut(s)	24, 1985
BspLI	GGNNCC	6 cut(s)	345, 928, 1150, 1298, 1299, 1560
BspMAI	CTGCAG	3 cut(s)	532, 835, 1380
BspMI	ACCTGC	2 cut(s)	1469, 1709
BspPI	GGATC	7 cut(s)	304, 414, 488, 903, 1001, 1026, 1429
BspT107I	GGYRCC	1 cut(s)	1148
BspTI	CTTAAG	1 cut(s)	550
BspTNI	GGTCTC	1 cut(s)	2034
BsrDI	GCAATG	1 cut(s)	789
BsrFI	RCCGGY	1 cut(s)	1672
BsrI	ACTGG	6 cut(s)	667, 806, 883, 1071, 1416, 1472
BssAI	RCCGGY	1 cut(s)	1672
BssECI	CCNNGG	9 cut(s)	139, 1010, 1080, 1439, 1440, 1518, 1554, 1555, 1678
BssMI	GATC	9 cut(s)	309, 419, 493, 499, 908, 1006, 1018, 1421, 1786
BssNI	GRCGYC	1 cut(s)	2081
BssSI	CACGAG	1 cut(s)	28
BssT1I	CCWWGG	3 cut(s)	139, 1518, 1678
Bst2BI	CACGAG	1 cut(s)	28
Bst2UI	CCWGG	9 cut(s)	325, 383, 596, 1012, 1398, 1441, 1556, 1574, 1976
Bst4CI	ACNGT	2 cut(s)	183, 1937
BstACI	GRCGYC	1 cut(s)	2081
BstAFI	CTTAAG	1 cut(s)	550
BstAPI	GCANNNNNTGC	2 cut(s)	1331, 1375
BstC8I	GCNNGC	6 cut(s)	105, 831, 1198, 1431, 1848, 2009
BstDSI	CCRYGG	1 cut(s)	1080
BstF5I	GGATG	9 cut(s)	118, 595, 724, 1020, 1039, 1180, 1549, 1730, 1738
BstFNI	CGCG	2 cut(s)	24, 1985
BstH2I	RGCGCY	3 cut(s)	139, 749, 848
BstHHI	GCGC	6 cut(s)	26, 138, 436, 748, 847, 1987
BstKTI	GATC	9 cut(s)	312, 422, 496, 502, 911, 1009, 1021, 1424, 1789
BstMAI	GTCTC	4 cut(s)	204, 919, 1320, 2034
BstMBI	GATC	9 cut(s)	309, 419, 493, 499, 908, 1006, 1018, 1421, 1786
BstNI	CCWGG	9 cut(s)	325, 383, 596, 1012, 1398, 1441, 1556, 1574, 1976
BstNSI	RCATGY	3 cut(s)	40, 230, 1144
BstSFI	CTRYAG	3 cut(s)	528, 831, 1376
BstSLI	GKGCMC	1 cut(s)	1537
BstUI	CGCG	2 cut(s)	24, 1985
BstV2I	GAAGAC	1 cut(s)	761
BstX2I	RGATCY	4 cut(s)	419, 493, 908, 1018
BstXI	CCANNNNNNTGG	1 cut(s)	1525
BstYI	RGATCY	4 cut(s)	419, 493, 908, 1018
BsuRI	GGCC	6 cut(s)	59, 346, 1676, 1684, 2011, 2020
BtgI	CCRYGG	1 cut(s)	1080
BtsCI	GGATG	9 cut(s)	118, 595, 724, 1020, 1039, 1180, 1549, 1730, 1738
BtsI	GCAGTG	1 cut(s)	1373
BtsIMutI	CAGTG	7 cut(s)	179, 674, 876, 1064, 1373, 1423, 1537
BveI	ACCTGC	2 cut(s)	1469, 1709
Cac8I	GCNNGC	6 cut(s)	105, 831, 1198, 1431, 1848, 2009
CaiI	CAGNNNCTG	1 cut(s)	536
CfoI	GCGC	6 cut(s)	26, 138, 436, 748, 847, 1987
Cfr10I	RCCGGY	1 cut(s)	1672
Cfr13I	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1559, 1640, 1675, 1682
CseI	GACGC	1 cut(s)	2089
CsiI	ACCWGGT	2 cut(s)	1572, 1974
Csp6I	GTAC	4 cut(s)	675, 695, 1882, 1933
CviQI	GTAC	4 cut(s)	675, 695, 1882, 1933
DpnI	GATC	9 cut(s)	311, 421, 495, 501, 910, 1008, 1020, 1423, 1788
DpnII	GATC	9 cut(s)	309, 419, 493, 499, 908, 1006, 1018, 1421, 1786
DraIII	CACNNNGTG	2 cut(s)	1331, 1541
DrdI	GACNNNNNNGTC	1 cut(s)	290
DseDI	GACNNNNNNGTC	1 cut(s)	290
Eco130I	CCWWGG	3 cut(s)	139, 1518, 1678
Eco31I	GGTCTC	1 cut(s)	2034
Eco32I	GATATC	1 cut(s)	359
Eco47I	GGWCC	5 cut(s)	47, 863, 1297, 1559, 1640
Eco47III	AGCGCT	2 cut(s)	747, 846
Eco57I	CTGAAG	5 cut(s)	551, 1805, 1844, 1874, 1904
EcoO109I	RGGNCCY	2 cut(s)	1297, 1559
EcoRI	GAATTC	1 cut(s)	151
EcoRII	CCWGG	9 cut(s)	323, 381, 594, 1010, 1396, 1439, 1554, 1572, 1974
EcoRV	GATATC	1 cut(s)	359
EcoT14I	CCWWGG	3 cut(s)	139, 1518, 1678
EcoT22I	ATGCAT	2 cut(s)	228, 1740
ErhI	CCWWGG	3 cut(s)	139, 1518, 1678
Esp3I	CGTCTC	1 cut(s)	919
FalI	AAGNNNNNCTT	4 cut(s)	150, 182, 618, 650
FaqI	GGGAC	3 cut(s)	1145, 1283, 1757
FauI	CCCGC	3 cut(s)	1022, 1509, 1809
FauNDI	CATATG	1 cut(s)	222
FokI	GGATG	9 cut(s)	125, 602, 731, 1027, 1046, 1167, 1536, 1717, 1725
FspBI	CTAG	4 cut(s)	743, 773, 869, 2016
GlaI	GCGC	6 cut(s)	25, 137, 435, 747, 846, 1986
GsuI	CTGGAG	2 cut(s)	420, 954
HaeII	RGCGCY	3 cut(s)	139, 749, 848
HaeIII	GGCC	6 cut(s)	59, 346, 1676, 1684, 2011, 2020
HapII	CCGG	4 cut(s)	281, 930, 1538, 1673
HgaI	GACGC	1 cut(s)	2089
HhaI	GCGC	6 cut(s)	26, 138, 436, 748, 847, 1987
Hin1I	GRCGYC	1 cut(s)	2081
Hin6I	GCGC	6 cut(s)	24, 136, 434, 746, 845, 1985
HinP1I	GCGC	6 cut(s)	24, 136, 434, 746, 845, 1985
HincII	GTYRAC	4 cut(s)	664, 1620, 1948, 2050
HindII	GTYRAC	4 cut(s)	664, 1620, 1948, 2050
HindIII	AAGCTT	1 cut(s)	333
HinfI	GANTC	4 cut(s)	425, 722, 1488, 1699
HpaI	GTTAAC	1 cut(s)	1948
HpaII	CCGG	4 cut(s)	281, 930, 1538, 1673
HphI	GGTGA	4 cut(s)	16, 658, 1206, 1401
Hpy166II	GTNNAC	9 cut(s)	664, 697, 706, 874, 1409, 1535, 1620, 1948, 2050
Hpy188I	TCNGA	9 cut(s)	424, 483, 570, 718, 1356, 1725, 1962, 2039, 2105
Hpy188III	TCNNGA	6 cut(s)	50, 313, 399, 497, 798, 1485
Hpy8I	GTNNAC	9 cut(s)	664, 697, 706, 874, 1409, 1535, 1620, 1948, 2050
Hpy99I	CGWCG	1 cut(s)	2083
HpyAV	CCTTC	6 cut(s)	534, 1221, 1829, 1868, 1898, 1928
HpyCH4III	ACNGT	2 cut(s)	183, 1937
HpyCH4IV	ACGT	2 cut(s)	766, 2081
HpySE526I	ACGT	2 cut(s)	766, 2081
Hsp92I	GRCGYC	1 cut(s)	2081
HspAI	GCGC	6 cut(s)	24, 136, 434, 746, 845, 1985
KflI	GGGWCCC	1 cut(s)	1297
KspAI	GTTAAC	1 cut(s)	1948
Kzo9I	GATC	9 cut(s)	309, 419, 493, 499, 908, 1006, 1018, 1421, 1786
LmnI	GCTCC	3 cut(s)	401, 842, 1342
LweI	GCATC	3 cut(s)	1048, 1747, 1813
MabI	ACCWGGT	2 cut(s)	1572, 1974
MaeI	CTAG	4 cut(s)	743, 773, 869, 2016
MaeII	ACGT	2 cut(s)	766, 2081
MaeIII	GTNAC	1 cut(s)	1510
MalI	GATC	9 cut(s)	311, 421, 495, 501, 910, 1008, 1020, 1423, 1788
MboI	GATC	9 cut(s)	309, 419, 493, 499, 908, 1006, 1018, 1421, 1786
MboII	GAAGA	2 cut(s)	761, 1013
MflI	RGATCY	4 cut(s)	419, 493, 908, 1018
MhlI	GDGCHC	1 cut(s)	1537
MluCI	AATT	8 cut(s)	7, 151, 202, 484, 1223, 1240, 1599, 1766
MlyI	GAGTC	2 cut(s)	434, 1693
MmeI	TCCRAC	1 cut(s)	165
Mph1103I	ATGCAT	2 cut(s)	228, 1740
MroXI	GAANNNNTTC	1 cut(s)	726
MseI	TTAA	4 cut(s)	120, 551, 945, 1947
MslI	CAYNNNNRTG	2 cut(s)	225, 730
MspA1I	CMGCKG	2 cut(s)	1504, 2093
MspCI	CTTAAG	1 cut(s)	550
MspI	CCGG	4 cut(s)	281, 930, 1538, 1673
Mva1269I	GAATGC	2 cut(s)	577, 1126
MvaI	CCWGG	9 cut(s)	325, 383, 596, 1012, 1398, 1441, 1556, 1574, 1976
MvnI	CGCG	2 cut(s)	24, 1985
NciI	CCSGG	1 cut(s)	1539
NdeI	CATATG	1 cut(s)	222
NdeII	GATC	9 cut(s)	309, 419, 493, 499, 908, 1006, 1018, 1421, 1786
NlaIV	GGNNCC	6 cut(s)	345, 928, 1150, 1298, 1299, 1560
NmeAIII	GCCGAG	1 cut(s)	372
NsiI	ATGCAT	2 cut(s)	228, 1740
NspI	RCATGY	3 cut(s)	40, 230, 1144
PasI	CCCWGGG	2 cut(s)	1440, 1555
PciI	ACATGT	1 cut(s)	1140
PcsI	WCGNNNNNNNCGW	1 cut(s)	2043
PctI	GAATGC	2 cut(s)	577, 1126
PdmI	GAANNNNTTC	1 cut(s)	726
PfeI	GAWTC	2 cut(s)	722, 1488
Pfl23II	CGTACG	1 cut(s)	1881
PflMI	CCANNNNNTGG	3 cut(s)	256, 1403, 1418
PleI	GAGTC	2 cut(s)	433, 1693
PpsI	GAGTC	2 cut(s)	433, 1693
PpuMI	RGGWCCY	2 cut(s)	1297, 1559
PscI	ACATGT	1 cut(s)	1140
Psp5II	RGGWCCY	2 cut(s)	1297, 1559
Psp6I	CCWGG	9 cut(s)	323, 381, 594, 1010, 1396, 1439, 1554, 1572, 1974
PspGI	CCWGG	9 cut(s)	323, 381, 594, 1010, 1396, 1439, 1554, 1572, 1974
PspLI	CGTACG	1 cut(s)	1881
PspN4I	GGNNCC	6 cut(s)	345, 928, 1150, 1298, 1299, 1560
PspPI	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1559, 1640, 1675, 1682
PspPPI	RGGWCCY	2 cut(s)	1297, 1559
PstI	CTGCAG	3 cut(s)	532, 835, 1380
PstNI	CAGNNNCTG	1 cut(s)	536
PsuI	RGATCY	4 cut(s)	419, 493, 908, 1018
PvuII	CAGCTG	1 cut(s)	2093
RsaI	GTAC	4 cut(s)	676, 696, 1883, 1934
RsaNI	GTAC	4 cut(s)	675, 695, 1882, 1933
RseI	CAYNNNNRTG	2 cut(s)	225, 730
SaqAI	TTAA	4 cut(s)	120, 551, 945, 1947
Sau3AI	GATC	9 cut(s)	309, 419, 493, 499, 908, 1006, 1018, 1421, 1786
Sau96I	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1559, 1640, 1675, 1682
SchI	GAGTC	2 cut(s)	434, 1693
SduI	GDGCHC	1 cut(s)	1537
SexAI	ACCWGGT	2 cut(s)	1572, 1974
SfaNI	GCATC	3 cut(s)	1048, 1747, 1813
SfcI	CTRYAG	3 cut(s)	528, 831, 1376
SfiI	GGCCNNNNNGGCC	1 cut(s)	2017
SinI	GGWCC	5 cut(s)	47, 863, 1297, 1559, 1640
SmiMI	CAYNNNNRTG	2 cut(s)	225, 730
SmlI	CTYRAG	3 cut(s)	550, 916, 2063
SmoI	CTYRAG	3 cut(s)	550, 916, 2063
Sse9I	AATT	8 cut(s)	7, 151, 202, 484, 1223, 1240, 1599, 1766
SsiI	CCGC	5 cut(s)	1029, 1388, 1502, 1802, 1983
SspMI	CTAG	4 cut(s)	743, 773, 869, 2016
StyI	CCWWGG	3 cut(s)	139, 1518, 1678
TaaI	ACNGT	2 cut(s)	183, 1937
TaiI	ACGT	2 cut(s)	769, 2084
TaqI	TCGA	3 cut(s)	69, 710, 1486
TaqII	GACCGA	1 cut(s)	35
TasI	AATT	8 cut(s)	7, 151, 202, 484, 1223, 1240, 1599, 1766
TauI	GCSGC	1 cut(s)	1390
TfiI	GAWTC	2 cut(s)	722, 1488
Tru1I	TTAA	4 cut(s)	120, 551, 945, 1947
Tru9I	TTAA	4 cut(s)	120, 551, 945, 1947
TscAI	CASTG	7 cut(s)	186, 674, 883, 1071, 1380, 1423, 1537
TspDTI	ATGAA	4 cut(s)	77, 209, 735, 798
TspGWI	ACGGA	3 cut(s)	575, 901, 1308
TspRI	CASTG	7 cut(s)	186, 674, 883, 1071, 1380, 1423, 1537
Van91I	CCANNNNNTGG	3 cut(s)	256, 1403, 1418
Vha464I	CTTAAG	1 cut(s)	550
VneI	GTGCAC	1 cut(s)	1533
VpaK11BI	GGWCC	5 cut(s)	47, 863, 1297, 1559, 1640
XapI	RAATTY	3 cut(s)	151, 484, 1240
XceI	RCATGY	3 cut(s)	40, 230, 1144
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1437
XmnI	GAANNNNTTC	1 cut(s)	726
XspI	CTAG	4 cut(s)	743, 773, 869, 2016
ZraI	GACGTC	1 cut(s)	2082
Zsp2I	ATGCAT	2 cut(s)	228, 1740

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.