Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0007349

Physical Location & Seq

Genomic Coordinates Forward (+)

63714188 .. 63718963

Gene Structure 4776 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G039840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGGTGAATTCTATGGTGGAGCGCGCCACGAGCGACATGCTCATCGGTCCTGATTGGGCCATGAACATCGAAATCTGCGACATATGCAACCACGACCCTGTGCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGCCTTGGAAGTAGGAATTCAAAAGTTCAACTTCTTGCCCTTACACTGTTGGAAACAATAATAAAGAATTGTGGAGATATTGTGCATATGCATGTAGCAGAGAAAGACCTCCTCCATGAGATGGTAAAAATAGTAAAGAAGAAGCCGGACTATCATGTCAAAGAGAAGATATTGATCCTGATAGATACCTGGCAAGAAGCTTTCGGTGGCCCAAGAGCAAGATATCCACAATACTATGCTGCATACCAGGAATTGTTGCGTGCTGGAGCAGTATTCCCCCACAGATCTGAGGCCGCTGCTCCTGTATTCACACCTCCCCAGACGCAACCATTGTCATCACTCCCTCAAAATCTGCACAATCCAGATCTTCCGAGAGACATATCTGAGCCTTCTGCAGAGCCCGAGTTCCCAACATTAAGCTTGACTGAAATTCAGAATGCACGGGGTATTATGGATGTCTTGGCGGAAATGCTAAGTGCTATCGATCCAGAGAACAAAGAGGGGCTTAGGCAGGAGGTTATTGTTGATTTGGTTGAACAGTGTCGTACATATAAGCAGAGGGTGGTACACCTTGTTAACTCGACTTCGGATGAATCACTTCTATGTCAAGGACTAGCACTGAATGATGACTTACAACGTCTTCTAGCCAAACATGAAGCCATTGCTTCAGGCAATCCAGTTCAACCGGATAAACCCAAGGCTGGACCTCCTGGAGCACTTGTAGATGTTGGTGGTCCTCTTATTGACACTGGAAATGATAACAAACAGCTTGATGGGAGATCCACTTCGAGTGCTGGTGCAAGCTCTAATCCACTAAATCAGTTATTACTTACTGGACCTCCAACTACTAATGGTGCAGCTCCTACGACAAAGGTCGATCCCAAGATGGATCTTCTTAGCGGAGATGACTTCAACTCACCGAAGGCAGATTCACTGGCTCTTGTTCCTGTGGATCAACAGCCAAGTAGTACTCCTGTATCCAATGCTCTTGTTCTTATGGACATGTTTTCTGACGGTAACAGCGCCCCAAATCCTGTAAATACCAATTCTCCTCATGCAGCCAACCAAACCAGTCCTTTAAACCCACAATTTCAACAGCAGCGGAATTTTCAAGCTCCACAAGGGGGAGTTCTCCCAAATGGAAGTGTCCCAAACATGGGAGCACCTCAGTATGAGCAGTCACTGTACGCACAAGGGGTGGCCCTCAACTATGGCAGCAGATGGTCAGATGGCTATGATCAACAACAACAACAACAAGCGCAATACCTTCAGCAGCAACAGCAACATCAACAAGGGCAATATCTCCAGCAGCAACATCAACAAGCGCAATACCTCCAGCAGCAACAGCTACATGCGCAATACTATCAGCAACAGCAGCAGCACCAGCAATATTTTCAGCAGCAGATGCACGGTCTTTCTGTTAATGATAATGGTACGAGAAACTCCTACCAGGCTCCCACATCATCGTATGTCCCACCTAGCAGGCCAGCCAAGCCAGAGGACAAGCTATTTGGAGACCTTGTTGACTTTGCAAAACTGAAACCAACAAAACCCACGGCCGGCAGAACTGGTAGCATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006464 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006635 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0015031 GO:0015833 GO:0015919 GO:0016042 GO:0016043 GO:0016054 GO:0016558 GO:0016567 GO:0016740 GO:0017038 GO:0019395 GO:0019538 GO:0019752 GO:0019787 GO:0019899 GO:0030258 GO:0031625 GO:0032446 GO:0032787 GO:0033036 GO:0033365 GO:0034440 GO:0034613 GO:0036211 GO:0042886 GO:0043170 GO:0043412 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044282 GO:0044389 GO:0044424 GO:0044464 GO:0044743 GO:0045184 GO:0046395 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0055114 GO:0061630 GO:0061659 GO:0065002 GO:0070647 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0072329 GO:0072594 GO:0072662 GO:0072663 GO:0140096 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

571

Amino Acids

62.89

Weight (kDa)

5.68

Isoelectric Point (pI)

46.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VHS	PF00790	3 - 128	3.7e-32	VHS domain
GAT	PF03127	196 - 269	2.2e-18	GAT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32760 AT4G32760 AT4G32760
fragaria_vesca	FvH4_2g35970 FvH4_2g35970 FvH4_2g35970 FvH4_2g35970 FvH4_2g35970
malus_domestica	MD08G1116900.v1.1 MD15G1096400.v1.1
prunus_persica	Prupe.1G451300_v2.0.a1 Prupe.1G451300_v2.0.a1
pyrus_communis	pycom08g09740 pycom15g08850
rosa_chinensis	RchiOBHm_Chr6g0305901
rosa_laevigata	RLG00000010848
rosa_multiflora	Rmu_sc0001809.1_g000047
rosa_roxburghii	Rroxscaffold_7G00162230
rosa_rugosa	Rorug06G0344900 Rorug06G0345000
rosa_samantha	Rh6AG456700 Rh6BG444600 Rh6CG470600 Rh6DG457300
rosa_wichuraiana	Rw6G039840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	290
Acc16I	TGCGCA	1 cut(s)	1491
AccB7I	CCANNNNNTGG	1 cut(s)	256
AccII	CGCG	1 cut(s)	24
AciI	CCGC	4 cut(s)	429, 599, 1035, 1237
AclWI	GGATC	6 cut(s)	304, 614, 909, 1007, 1032, 1095
AcoI	YGGCCR	1 cut(s)	1692
AcsI	RAATTY	4 cut(s)	7, 151, 564, 1240
AcuI	CTGAAG	2 cut(s)	786, 1388
AfaI	GTAC	5 cut(s)	682, 702, 1105, 1322, 1570
AfiI	CCNNNNNNNGG	6 cut(s)	256, 836, 1259, 1291, 1292, 1694
AflIII	ACRYGT	1 cut(s)	1137
AgsI	TTSAA	7 cut(s)	156, 164, 671, 818, 1048, 1229, 1247
AjnI	CCWGG	4 cut(s)	323, 381, 844, 1584
AluBI	AGCT	8 cut(s)	335, 555, 904, 939, 995, 1250, 1483, 1642
AluI	AGCT	8 cut(s)	335, 555, 904, 939, 995, 1250, 1483, 1642
Alw21I	GWGCWC	2 cut(s)	853, 1300
Alw26I	GTCTC	2 cut(s)	504, 1644
AlwI	GGATC	6 cut(s)	304, 614, 909, 1007, 1032, 1095
AlwNI	CAGNNNCTG	1 cut(s)	1318
Ama87I	CYCGRG	1 cut(s)	536
AoxI	GGCC	6 cut(s)	57, 343, 426, 1335, 1619, 1692
ApoI	RAATTY	4 cut(s)	7, 151, 564, 1240
ArsI	GACNNNNNNTTYG	2 cut(s)	1628, 1660
Asp700I	GAANNNNTTC	1 cut(s)	732
AspLEI	GCGC	7 cut(s)	24, 26, 138, 1160, 1396, 1462, 1492
AspS9I	GGNCC	7 cut(s)	47, 57, 344, 839, 869, 971, 1336
AsuHPI	GGTGA	2 cut(s)	16, 1044
AvaI	CYCGRG	1 cut(s)	536
AvaII	GGWCC	4 cut(s)	47, 839, 869, 971
BaeI	ACNNNNGTAYC	2 cut(s)	1095, 1128
BanII	GRGCYC	1 cut(s)	537
BauI	CACGAG	1 cut(s)	28
BbsI	GAAGAC	1 cut(s)	767
Bbv12I	GWGCWC	2 cut(s)	853, 1300
BccI	CCATC	5 cut(s)	250, 902, 1015, 1350, 1358
BceAI	ACGGC	1 cut(s)	1707
BcgI	CGANNNNNNTGC	2 cut(s)	19, 53
BciT130I	CCWGG	4 cut(s)	325, 383, 846, 1586
BciVI	GTATCC	1 cut(s)	1123
BclI	TGATCA	1 cut(s)	1372
BcoDI	GTCTC	2 cut(s)	504, 1644
BfaI	CTAG	3 cut(s)	749, 779, 1614
BfmI	CTRYAG	1 cut(s)	528
BfoI	RGCGCY	2 cut(s)	139, 1161
BfuI	GTATCC	1 cut(s)	1123
BglII	AGATCT	2 cut(s)	419, 499
BmcAI	AGTACT	1 cut(s)	1105
Bme1390I	CCNGG	4 cut(s)	325, 383, 846, 1586
Bme18I	GGWCC	4 cut(s)	47, 839, 869, 971
BmeT110I	CYCGRG	1 cut(s)	536
BmgT120I	GGNCC	7 cut(s)	47, 57, 344, 839, 869, 971, 1336
BmiI	GGNNCC	1 cut(s)	1590
BmrFI	CCNGG	4 cut(s)	325, 383, 846, 1586
BmsI	GCATC	1 cut(s)	1530
BoxI	GACNNNNGTC	1 cut(s)	1007
BpiI	GAAGAC	1 cut(s)	767
BpmI	CTGGAG	4 cut(s)	420, 867, 1424, 1454
Bpu10I	CCTNAGC	1 cut(s)	641
Bsa29I	ATCGAT	1 cut(s)	618
BsaBI	GATNNNNATC	1 cut(s)	308
BsaI	GGTCTC	1 cut(s)	1644
BsaJI	CCNNGG	3 cut(s)	139, 831, 1689
BsaWI	WCCGGW	1 cut(s)	820
Bsc4I	CCNNNNNNNGG	6 cut(s)	256, 836, 1259, 1291, 1292, 1694
Bse118I	RCCGGY	1 cut(s)	1694
Bse1I	ACTGG	6 cut(s)	812, 889, 973, 1074, 1206, 1708
Bse3DI	GCAATG	1 cut(s)	795
Bse8I	GATNNNNATC	1 cut(s)	308
BseBI	CCWGG	4 cut(s)	325, 383, 846, 1586
BseCI	ATCGAT	1 cut(s)	618
BseDI	CCNNGG	3 cut(s)	139, 831, 1689
BseGI	GGATG	3 cut(s)	118, 595, 730
BseJI	GATNNNNATC	1 cut(s)	308
BseLI	CCNNNNNNNGG	6 cut(s)	256, 836, 1259, 1291, 1292, 1694
BseMI	GCAATG	1 cut(s)	795
BseMII	CTCAG	3 cut(s)	414, 510, 1316
BseNI	ACTGG	6 cut(s)	812, 889, 973, 1074, 1206, 1708
BsePI	GCGCGC	1 cut(s)	22
BseRI	GAGGAG	2 cut(s)	236, 1176
BseX3I	CGGCCG	1 cut(s)	1692
BsgI	GTGCAG	2 cut(s)	473, 1011
Bsh1236I	CGCG	1 cut(s)	24
Bsh1285I	CGRYCG	1 cut(s)	1695
BshFI	GGCC	6 cut(s)	59, 345, 428, 1337, 1621, 1694
BshVI	ATCGAT	1 cut(s)	618
BsiEI	CGRYCG	1 cut(s)	1695
BsiHKAI	GWGCWC	2 cut(s)	853, 1300
BsiHKCI	CYCGRG	1 cut(s)	536
BsiSI	CCGG	3 cut(s)	281, 821, 1695
BslFI	GGGAC	2 cut(s)	1268, 1592
BslI	CCNNNNNNNGG	6 cut(s)	256, 836, 1259, 1291, 1292, 1694
BsmAI	GTCTC	2 cut(s)	504, 1644
BsmFI	GGGAC	2 cut(s)	1268, 1592
BsmI	GAATGC	1 cut(s)	577
BsnI	GGCC	6 cut(s)	59, 345, 428, 1337, 1621, 1694
Bso31I	GGTCTC	1 cut(s)	1644
BsoBI	CYCGRG	1 cut(s)	536
Bsp1286I	GDGCHC	3 cut(s)	537, 853, 1300
Bsp143I	GATC	9 cut(s)	309, 419, 499, 619, 914, 1012, 1024, 1087, 1372
BspACI	CCGC	4 cut(s)	429, 599, 1035, 1237
BspANI	GGCC	6 cut(s)	59, 345, 428, 1337, 1621, 1694
BspCNI	CTCAG	3 cut(s)	415, 511, 1315
BspDI	ATCGAT	1 cut(s)	618
BspFNI	CGCG	1 cut(s)	24
BspLI	GGNNCC	1 cut(s)	1590
BspMAI	CTGCAG	1 cut(s)	532
BspPI	GGATC	6 cut(s)	304, 614, 909, 1007, 1032, 1095
BspTNI	GGTCTC	1 cut(s)	1644
BsrDI	GCAATG	1 cut(s)	795
BsrFI	RCCGGY	1 cut(s)	1694
BsrI	ACTGG	6 cut(s)	812, 889, 973, 1074, 1206, 1708
BssAI	RCCGGY	1 cut(s)	1694
BssECI	CCNNGG	3 cut(s)	139, 831, 1689
BssHII	GCGCGC	1 cut(s)	22
BssMI	GATC	9 cut(s)	309, 419, 499, 619, 914, 1012, 1024, 1087, 1372
BssSI	CACGAG	1 cut(s)	28
BssT1I	CCWWGG	2 cut(s)	139, 831
Bst2BI	CACGAG	1 cut(s)	28
Bst2UI	CCWGG	4 cut(s)	325, 383, 846, 1586
Bst4CI	ACNGT	5 cut(s)	183, 675, 1151, 1320, 1547
BstAPI	GCANNNNNTGC	1 cut(s)	1540
BstC8I	GCNNGC	7 cut(s)	24, 105, 396, 937, 1619, 1623, 1696
BstDEI	CTNAG	6 cut(s)	423, 519, 608, 641, 1031, 1302
BstDSI	CCRYGG	1 cut(s)	1689
BstF5I	GGATG	3 cut(s)	118, 595, 730
BstFNI	CGCG	1 cut(s)	24
BstH2I	RGCGCY	2 cut(s)	139, 1161
BstHHI	GCGC	7 cut(s)	24, 26, 138, 1160, 1396, 1462, 1492
BstKTI	GATC	9 cut(s)	312, 422, 502, 622, 917, 1015, 1027, 1090, 1375
BstMAI	GTCTC	2 cut(s)	504, 1644
BstMBI	GATC	9 cut(s)	309, 419, 499, 619, 914, 1012, 1024, 1087, 1372
BstMCI	CGRYCG	1 cut(s)	1695
BstMWI	GCNNNNNNNGC	9 cut(s)	30, 84, 1414, 1480, 1489, 1510, 1519, 1540, 1627
BstNI	CCWGG	4 cut(s)	325, 383, 846, 1586
BstNSI	RCATGY	5 cut(s)	40, 230, 1141, 1490, 1714
BstPAI	GACNNNNGTC	1 cut(s)	1007
BstSCI	CCNGG	4 cut(s)	323, 381, 844, 1584
BstSFI	CTRYAG	1 cut(s)	528
BstUI	CGCG	1 cut(s)	24
BstV2I	GAAGAC	1 cut(s)	767
BstX2I	RGATCY	4 cut(s)	419, 499, 914, 1024
BstYI	RGATCY	4 cut(s)	419, 499, 914, 1024
BstZI	CGGCCG	1 cut(s)	1692
Bsu15I	ATCGAT	1 cut(s)	618
BsuI	GTATCC	1 cut(s)	1123
BsuRI	GGCC	6 cut(s)	59, 345, 428, 1337, 1621, 1694
BsuTUI	ATCGAT	1 cut(s)	618
BtgI	CCRYGG	1 cut(s)	1689
BtsCI	GGATG	3 cut(s)	118, 595, 730
BtsIMutI	CAGTG	6 cut(s)	179, 680, 752, 882, 1067, 1316
Cac8I	GCNNGC	7 cut(s)	24, 105, 396, 937, 1619, 1623, 1696
CaiI	CAGNNNCTG	1 cut(s)	1318
CfoI	GCGC	7 cut(s)	24, 26, 138, 1160, 1396, 1462, 1492
Cfr10I	RCCGGY	1 cut(s)	1694
Cfr13I	GGNCC	7 cut(s)	47, 57, 344, 839, 869, 971, 1336
ClaI	ATCGAT	1 cut(s)	618
CseI	GACGC	1 cut(s)	466
Csp6I	GTAC	5 cut(s)	681, 701, 1104, 1321, 1569
CviQI	GTAC	5 cut(s)	681, 701, 1104, 1321, 1569
DdeI	CTNAG	6 cut(s)	423, 519, 608, 641, 1031, 1302
DpnI	GATC	9 cut(s)	311, 421, 501, 621, 916, 1014, 1026, 1089, 1374
DpnII	GATC	9 cut(s)	309, 419, 499, 619, 914, 1012, 1024, 1087, 1372
DraI	TTTAAA	1 cut(s)	1215
DrdI	GACNNNNNNGTC	1 cut(s)	290
DseDI	GACNNNNNNGTC	1 cut(s)	290
EaeI	YGGCCR	1 cut(s)	1692
EagI	CGGCCG	1 cut(s)	1692
EciI	GGCGGA	1 cut(s)	614
EclXI	CGGCCG	1 cut(s)	1692
Eco130I	CCWWGG	2 cut(s)	139, 831
Eco24I	GRGCYC	1 cut(s)	537
Eco31I	GGTCTC	1 cut(s)	1644
Eco32I	GATATC	1 cut(s)	359
Eco47I	GGWCC	4 cut(s)	47, 839, 869, 971
Eco52I	CGGCCG	1 cut(s)	1692
Eco57I	CTGAAG	2 cut(s)	786, 1388
Eco88I	CYCGRG	1 cut(s)	536
EcoRI	GAATTC	2 cut(s)	7, 151
EcoRII	CCWGG	4 cut(s)	323, 381, 844, 1584
EcoRV	GATATC	1 cut(s)	359
EcoT14I	CCWWGG	2 cut(s)	139, 831
EcoT22I	ATGCAT	1 cut(s)	228
EcoT38I	GRGCYC	1 cut(s)	537
ErhI	CCWWGG	2 cut(s)	139, 831
FalI	AAGNNNNNCTT	4 cut(s)	150, 182, 624, 656
FaqI	GGGAC	2 cut(s)	1268, 1592
FauNDI	CATATG	2 cut(s)	83, 222
FbaI	TGATCA	1 cut(s)	1372
FokI	GGATG	3 cut(s)	125, 602, 737
FriOI	GRGCYC	1 cut(s)	537
FspBI	CTAG	3 cut(s)	749, 779, 1614
FspI	TGCGCA	1 cut(s)	1491
GlaI	GCGC	7 cut(s)	23, 25, 137, 1159, 1395, 1461, 1491
GsuI	CTGGAG	4 cut(s)	420, 867, 1424, 1454
HaeII	RGCGCY	2 cut(s)	139, 1161
HaeIII	GGCC	6 cut(s)	59, 345, 428, 1337, 1621, 1694
HapII	CCGG	3 cut(s)	281, 821, 1695
HgaI	GACGC	1 cut(s)	466
HhaI	GCGC	7 cut(s)	24, 26, 138, 1160, 1396, 1462, 1492
Hin6I	GCGC	7 cut(s)	22, 24, 136, 1158, 1394, 1460, 1490
HinP1I	GCGC	7 cut(s)	22, 24, 136, 1158, 1394, 1460, 1490
HincII	GTYRAC	2 cut(s)	712, 1660
HindII	GTYRAC	2 cut(s)	712, 1660
HindIII	AAGCTT	2 cut(s)	333, 553
HinfI	GANTC	2 cut(s)	728, 1064
HpaI	GTTAAC	1 cut(s)	712
HpaII	CCGG	3 cut(s)	281, 821, 1695
HphI	GGTGA	2 cut(s)	16, 1044
Hpy166II	GTNNAC	3 cut(s)	703, 712, 1660
Hpy188I	TCNGA	7 cut(s)	424, 507, 520, 570, 724, 1147, 1363
Hpy188III	TCNNGA	4 cut(s)	50, 313, 497, 623
Hpy8I	GTNNAC	3 cut(s)	703, 712, 1660
HpyAV	CCTTC	3 cut(s)	534, 1051, 1412
HpyCH4III	ACNGT	5 cut(s)	183, 675, 1151, 1320, 1547
HpyCH4IV	ACGT	1 cut(s)	772
HpyF10VI	GCNNNNNNNGC	9 cut(s)	30, 84, 1414, 1480, 1489, 1510, 1519, 1540, 1627
HpyF3I	CTNAG	6 cut(s)	423, 519, 608, 641, 1031, 1302
HpySE526I	ACGT	1 cut(s)	772
HspAI	GCGC	7 cut(s)	22, 24, 136, 1158, 1394, 1460, 1490
KroI	GCCGGC	1 cut(s)	1694
KroNI	GCCGGC	1 cut(s)	1696
Ksp22I	TGATCA	1 cut(s)	1372
KspAI	GTTAAC	1 cut(s)	712
Kzo9I	GATC	9 cut(s)	309, 419, 499, 619, 914, 1012, 1024, 1087, 1372
LmnI	GCTCC	8 cut(s)	19, 401, 439, 848, 1000, 1255, 1295, 1594
LweI	GCATC	1 cut(s)	1530
MaeI	CTAG	3 cut(s)	749, 779, 1614
MaeII	ACGT	1 cut(s)	772
MaeIII	GTNAC	2 cut(s)	1151, 1314
MalI	GATC	9 cut(s)	311, 421, 501, 621, 916, 1014, 1026, 1089, 1374
MboI	GATC	9 cut(s)	309, 419, 499, 619, 914, 1012, 1024, 1087, 1372
MboII	GAAGA	5 cut(s)	286, 313, 494, 767, 1019
MflI	RGATCY	4 cut(s)	419, 499, 914, 1024
MhlI	GDGCHC	3 cut(s)	537, 853, 1300
MluCI	AATT	8 cut(s)	7, 151, 202, 386, 564, 1180, 1223, 1240
MmeI	TCCRAC	2 cut(s)	165, 1001
Mph1103I	ATGCAT	1 cut(s)	228
MroNI	GCCGGC	1 cut(s)	1694
MroXI	GAANNNNTTC	1 cut(s)	732
MseI	TTAA	5 cut(s)	120, 551, 711, 1214, 1557
MslI	CAYNNNNRTG	2 cut(s)	225, 736
MspA1I	CMGCKG	2 cut(s)	431, 1237
MspI	CCGG	3 cut(s)	281, 821, 1695
MspR9I	CCNGG	4 cut(s)	325, 383, 846, 1586
Mva1269I	GAATGC	1 cut(s)	577
MvaI	CCWGG	4 cut(s)	325, 383, 846, 1586
MvnI	CGCG	1 cut(s)	24
MwoI	GCNNNNNNNGC	9 cut(s)	30, 84, 1414, 1480, 1489, 1510, 1519, 1540, 1627
NaeI	GCCGGC	1 cut(s)	1696
NdeI	CATATG	2 cut(s)	83, 222
NdeII	GATC	9 cut(s)	309, 419, 499, 619, 914, 1012, 1024, 1087, 1372
NgoMIV	GCCGGC	1 cut(s)	1694
NlaIV	GGNNCC	1 cut(s)	1590
NmuCI	GTSAC	1 cut(s)	1314
NsbI	TGCGCA	1 cut(s)	1491
NsiI	ATGCAT	1 cut(s)	228
NspI	RCATGY	5 cut(s)	40, 230, 1141, 1490, 1714
PauI	GCGCGC	1 cut(s)	22
PciI	ACATGT	1 cut(s)	1137
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	1 cut(s)	577
PdiI	GCCGGC	1 cut(s)	1696
PdmI	GAANNNNTTC	1 cut(s)	732
PfeI	GAWTC	2 cut(s)	728, 1064
PflMI	CCANNNNNTGG	1 cut(s)	256
PfoI	TCCNGGA	1 cut(s)	844
PscI	ACATGT	1 cut(s)	1137
PshAI	GACNNNNGTC	1 cut(s)	1007
Psp6I	CCWGG	4 cut(s)	323, 381, 844, 1584
PspGI	CCWGG	4 cut(s)	323, 381, 844, 1584
PspN4I	GGNNCC	1 cut(s)	1590
PspPI	GGNCC	7 cut(s)	47, 57, 344, 839, 869, 971, 1336
PstI	CTGCAG	1 cut(s)	532
PstNI	CAGNNNCTG	1 cut(s)	1318
PsuI	RGATCY	4 cut(s)	419, 499, 914, 1024
PteI	GCGCGC	1 cut(s)	22
RsaI	GTAC	5 cut(s)	682, 702, 1105, 1322, 1570
RsaNI	GTAC	5 cut(s)	681, 701, 1104, 1321, 1569
RseI	CAYNNNNRTG	2 cut(s)	225, 736
SaqAI	TTAA	5 cut(s)	120, 551, 711, 1214, 1557
Sau3AI	GATC	9 cut(s)	309, 419, 499, 619, 914, 1012, 1024, 1087, 1372
Sau96I	GGNCC	7 cut(s)	47, 57, 344, 839, 869, 971, 1336
ScaI	AGTACT	1 cut(s)	1105
ScrFI	CCNGG	4 cut(s)	325, 383, 846, 1586
SduI	GDGCHC	3 cut(s)	537, 853, 1300
SfaNI	GCATC	1 cut(s)	1530
SfcI	CTRYAG	1 cut(s)	528
SinI	GGWCC	4 cut(s)	47, 839, 869, 971
SmiMI	CAYNNNNRTG	2 cut(s)	225, 736
Sse9I	AATT	8 cut(s)	7, 151, 202, 386, 564, 1180, 1223, 1240
SsiI	CCGC	4 cut(s)	429, 599, 1035, 1237
SspI	AATATT	1 cut(s)	1526
SspMI	CTAG	3 cut(s)	749, 779, 1614
StyD4I	CCNGG	4 cut(s)	323, 381, 844, 1584
StyI	CCWWGG	2 cut(s)	139, 831
TaaI	ACNGT	5 cut(s)	183, 675, 1151, 1320, 1547
TaiI	ACGT	1 cut(s)	775
TaqI	TCGA	5 cut(s)	69, 618, 716, 923, 1011
TaqII	GACCGA	1 cut(s)	35
TasI	AATT	8 cut(s)	7, 151, 202, 386, 564, 1180, 1223, 1240
TatI	WGTACW	1 cut(s)	1103
TauI	GCSGC	1 cut(s)	431
TfiI	GAWTC	2 cut(s)	728, 1064
Tru1I	TTAA	5 cut(s)	120, 551, 711, 1214, 1557
Tru9I	TTAA	5 cut(s)	120, 551, 711, 1214, 1557
TscAI	CASTG	6 cut(s)	186, 680, 759, 889, 1074, 1323
TseFI	GTSAC	1 cut(s)	1314
Tsp45I	GTSAC	1 cut(s)	1314
TspDTI	ATGAA	3 cut(s)	77, 741, 804
TspRI	CASTG	6 cut(s)	186, 680, 759, 889, 1074, 1323
Van91I	CCANNNNNTGG	1 cut(s)	256
VpaK11BI	GGWCC	4 cut(s)	47, 839, 869, 971
XapI	RAATTY	4 cut(s)	7, 151, 564, 1240
XceI	RCATGY	5 cut(s)	40, 230, 1141, 1490, 1714
XmnI	GAANNNNTTC	1 cut(s)	732
XspI	CTAG	3 cut(s)	749, 779, 1614
ZrmI	AGTACT	1 cut(s)	1105
Zsp2I	ATGCAT	1 cut(s)	228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.