Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0007349

Physical Location & Seq

Genomic Coordinates Reverse (-)

8107309 .. 8113392

Gene Structure 6084 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g09740.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGTGAATTATCTGGTGGAACGCGCCACGAGCGACATGCTCATCGGTCCTGATTGGGCCATGAACATCGAAATCTGTGACATATGCAACCACGACCCTGTGCAAGCGAAGGATGTTGTTAAAGGTATAAAGAAGCGCCTTGGAAGTAAGAATTCAAAAGTTCAACTTCTTGCACTTACACTGTTGGAAACAATAATAAAGAATTGTGGAGATATTGTTCATATGCATGTAGCAGAGAAAGATCTCCTCCATGATATGGTTAGAATAGTAAAAAAGAAGCCGGACTATCATGTCAAAGATAAGATACTGATCCTGATAGATACCTGGCAAGAAGCTTTTGGGGGGCCGAGAGCAAGATATCCACAATACTATGCTGCATACCAGGATTTGTTGCGTTCTGGAGCAGTATTCCCTCAAAGATCCGAGTCATCTGCGCCTGTATTCACACCACCCCAGACACAGCCATTGACAGCATATCCTCAGAATTTGCAAAATCCAGATCGTCCAAAAGATGTAGCTGAGCCTTCTGCAGAGGCTGAGTTCCCAACCTTAAGTTTGACGGAACTTCAGAATGCACGGGGTATCATGGATGTCCTGGCAGAAATGCTAAGTGCCATAGATAACAAAGAGGGGCTTAGGCAGGAGGTGATTATTGATTTGGTCGACCAGTGCCGTACATATAAGCAGAGAGTGGTACACCTTGTAAACTCGACTTCGGATGAATCACTTCTATGTCAAGGACTAGCGCTGAATGATGACTTGCAACGTCTTCTAGCCAAGCATGAAGCCATTGCTTCGGGAAATCCAGTTCAGCCAGATAAACCCAAGCCTGCAGCAAATGGAGCGCTTGTAGATGTTGGTGGTCCTCTAGTGGACACCGGAAATGACAACAAACAGCCTGATGGGAGATCCGTCTCAAGTTCTGGTTCCGGTGCTAATCCTCTTAATCAGTTATTGCTTACTGCCCCTCCAGCTACTAATGCTTCGACTTCTACTGCAAAGGCTGATCCCAGGATGGATCTTCTTAGTGGGGATGACTTTGGCTTACCAAAGGCAGATGCTTCACTGGCTCTTGTTCCCATGGGAGGACAACAGCCAACTACTCCTGTTTCTCAGCAGAATGCCCTTGCTCTTATGGACATGTTTGGCACCGAGAGTGTCCCAAACCCTGTGAATACCCATCCTGCTAATGCAGCCAGCCAACCCAATCCTTCAACCCCACAATTCCCACAGCAGCAGAATTTTCAATCTCCACAAGGAGGATTTCTCCCGAATGGAAATGCCCCAATCATGGGGGTCCCTCAGTATGAGCAGTCTCCGTTTGCACAAGGTGCTGCTCCTGCATGGAATGGTCAGATGGTGCAGTCGCAGCAGCCGCTTTCGCCAGGCTATGGTTCACCAACCAGTGGATCATTGCCACCACCTCCCTGGGAAGCTCAGTCAATAGATGATGGCAGTCCAGTAGCAGGTTCTCGATTCTCTCCGCCCCCGCTGCAAGTTACCACCAAGGTGGTGGTCAGTGCACCGGGTGGTTTCCATCCCCAGGGTCCTCAAGGCGACCAGGTTGTAGGTATGTACATCCAGCCAGTTACAAGCACCCATTTGTCAACAATCAATAACCAAGTTGGTCCGAGCAATCATTTGGGTTTGCCCTCTCAACCGGCCCAAGGGCCATATACGGGTATGACTCCACAAGCTATTCAAGCAGGCCAAATGACATCTATGTATCCTCAACAAATGTATGGTGGTAATCAACTTGTCCCCTACAGCTACGATCAACAACAGCAACAGCATCCGCATCAAGCATACGCCCTTCAGCAACAACAGCAACAGCAATATCAACATCAACAAGCGTACGCCCTTCAGCAACAGCAACAACAGCAATATGCCCTTCAGCAGCAAATGTACGGTCTTTCTGTTAATGATAATGGTCTGAAAAACCCCTACCAGGTTTCCGCACCATCTTATGTTCCTCCAAGCAGGCCATCGAGGCCAGAGGATAAACTATTCGGAGACCTCGTTGACTTTGCAAAACTCAAGCCAACAAAACCGACGTCTGGTGCAGCTGGTAGCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006464 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006635 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0015031 GO:0015833 GO:0015919 GO:0016042 GO:0016043 GO:0016054 GO:0016558 GO:0016567 GO:0016740 GO:0017038 GO:0019395 GO:0019538 GO:0019752 GO:0019787 GO:0019899 GO:0030258 GO:0031625 GO:0032446 GO:0032787 GO:0033036 GO:0033365 GO:0034440 GO:0034613 GO:0036211 GO:0042886 GO:0043170 GO:0043412 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044282 GO:0044389 GO:0044424 GO:0044464 GO:0044743 GO:0045184 GO:0046395 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0055114 GO:0061630 GO:0061659 GO:0065002 GO:0070647 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0072329 GO:0072594 GO:0072662 GO:0072663 GO:0140096 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

693

Amino Acids

74.76

Weight (kDa)

5.53

Isoelectric Point (pI)

52.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32760 AT4G32760 AT4G32760
fragaria_vesca	FvH4_2g35970 FvH4_2g35970 FvH4_2g35970 FvH4_2g35970 FvH4_2g35970
malus_domestica	MD08G1116900.v1.1 MD15G1096400.v1.1
prunus_persica	Prupe.1G451300_v2.0.a1 Prupe.1G451300_v2.0.a1
pyrus_communis	pycom08g09740 pycom15g08850
rosa_chinensis	RchiOBHm_Chr6g0305901
rosa_laevigata	RLG00000010848
rosa_multiflora	Rmu_sc0001809.1_g000047
rosa_roxburghii	Rroxscaffold_7G00162230
rosa_rugosa	Rorug06G0344900 Rorug06G0345000
rosa_samantha	Rh6AG456700 Rh6BG444600 Rh6CG470600 Rh6DG457300
rosa_wichuraiana	Rw6G039840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	290
AatII	GACGTC	1 cut(s)	2057
Acc36I	ACCTGC	1 cut(s)	1457
AccB1I	GGYRCC	1 cut(s)	1148
AccB7I	CCANNNNNTGG	3 cut(s)	256, 1391, 1406
AccI	GTMKAC	1 cut(s)	663
AccII	CGCG	1 cut(s)	24
AciI	CCGC	5 cut(s)	1376, 1484, 1490, 1796, 1956
AclWI	GGATC	6 cut(s)	304, 414, 903, 1001, 1026, 1417
AcsI	RAATTY	3 cut(s)	151, 484, 1240
AcuI	CTGAAG	4 cut(s)	551, 1799, 1847, 1877
AcyI	GRCGYC	1 cut(s)	2054
AdeI	CACNNNGTG	2 cut(s)	1331, 1529
AfaI	GTAC	5 cut(s)	676, 696, 1577, 1856, 1907
AfeI	AGCGCT	2 cut(s)	747, 846
AflII	CTTAAG	1 cut(s)	550
AflIII	ACRYGT	1 cut(s)	1140
AgsI	TTSAA	5 cut(s)	156, 164, 1215, 1247, 1703
AjnI	CCWGG	9 cut(s)	323, 381, 594, 1010, 1384, 1427, 1542, 1560, 1947
AleI	CACNNNNGTG	1 cut(s)	1508
AloI	GAACNNNNNNTCC	4 cut(s)	201, 233, 792, 824
AluBI	AGCT	7 cut(s)	335, 518, 974, 1436, 1697, 1770, 2066
AluI	AGCT	7 cut(s)	335, 518, 974, 1436, 1697, 1770, 2066
Alw21I	GWGCWC	1 cut(s)	1525
Alw26I	GTCTC	3 cut(s)	919, 1320, 2007
Alw44I	GTGCAC	1 cut(s)	1521
AlwI	GGATC	6 cut(s)	304, 414, 903, 1001, 1026, 1417
AlwNI	CAGNNNCTG	1 cut(s)	536
Aor51HI	AGCGCT	2 cut(s)	747, 846
AoxI	GGCC	7 cut(s)	57, 344, 1662, 1670, 1708, 1982, 1991
ApaLI	GTGCAC	1 cut(s)	1521
ApoI	RAATTY	3 cut(s)	151, 484, 1240
ArsI	GACNNNNNNTTYG	4 cut(s)	1894, 1926, 2039, 2071
Asp700I	GAANNNNTTC	1 cut(s)	726
AspLEI	GCGC	5 cut(s)	26, 138, 436, 748, 847
AspS9I	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1547, 1628, 1663, 1670
AsuC2I	CCSGG	1 cut(s)	1527
AsuHPI	GGTGA	3 cut(s)	16, 658, 1389
AvaII	GGWCC	5 cut(s)	47, 863, 1297, 1547, 1628
BaeGI	GKGCMC	1 cut(s)	1525
BanI	GGYRCC	1 cut(s)	1148
BauI	CACGAG	1 cut(s)	28
BbsI	GAAGAC	1 cut(s)	761
Bbv12I	GWGCWC	1 cut(s)	1525
BccI	CCATC	8 cut(s)	896, 1009, 1188, 1351, 1445, 1545, 1969, 1993
BceAI	ACGGC	1 cut(s)	657
BcgI	CGANNNNNNTGC	4 cut(s)	19, 53, 413, 447
BciT130I	CCWGG	9 cut(s)	325, 383, 596, 1012, 1386, 1429, 1544, 1562, 1949
BciVI	GTATCC	1 cut(s)	1737
BcnI	CCSGG	1 cut(s)	1527
BcoDI	GTCTC	3 cut(s)	919, 1320, 2007
BfaI	CTAG	3 cut(s)	743, 773, 869
BfmI	CTRYAG	3 cut(s)	528, 831, 1765
BfoI	RGCGCY	3 cut(s)	139, 749, 848
BfrI	CTTAAG	1 cut(s)	550
BfuAI	ACCTGC	1 cut(s)	1457
BfuI	GTATCC	1 cut(s)	1737
BglI	GCCNNNNNGGC	1 cut(s)	1990
BglII	AGATCT	1 cut(s)	241
BlpI	GCTNAGC	1 cut(s)	519
Bme18I	GGWCC	5 cut(s)	47, 863, 1297, 1547, 1628
BmgT120I	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1547, 1628, 1663, 1670
BmiI	GGNNCC	6 cut(s)	345, 928, 1150, 1298, 1299, 1548
BmsI	GCATC	3 cut(s)	1048, 1801, 1807
BpiI	GAAGAC	1 cut(s)	761
BplI	GAGNNNNNCTC	2 cut(s)	1251, 1283
BpmI	CTGGAG	2 cut(s)	420, 954
Bpu10I	CCTNAGC	1 cut(s)	635
Bpu1102I	GCTNAGC	1 cut(s)	519
BpuEI	CTTGAG	3 cut(s)	901, 1536, 2021
BpuMI	CCSGG	1 cut(s)	1527
BsaBI	GATNNNNATC	1 cut(s)	308
BsaHI	GRCGYC	1 cut(s)	2054
BsaI	GGTCTC	1 cut(s)	2007
BsaJI	CCNNGG	9 cut(s)	139, 1010, 1080, 1427, 1428, 1506, 1542, 1543, 1666
BsaWI	WCCGGW	2 cut(s)	878, 929
BsaXI	ACNNNNNCTCC	8 cut(s)	201, 231, 834, 864, 952, 982, 2004, 2034
Bse118I	RCCGGY	1 cut(s)	1660
Bse1I	ACTGG	6 cut(s)	667, 806, 1071, 1404, 1460, 1586
Bse3DI	GCAATG	2 cut(s)	789, 1412
Bse8I	GATNNNNATC	1 cut(s)	308
BseBI	CCWGG	9 cut(s)	325, 383, 596, 1012, 1386, 1429, 1544, 1562, 1949
BseDI	CCNNGG	9 cut(s)	139, 1010, 1080, 1427, 1428, 1506, 1542, 1543, 1666
BseGI	GGATG	9 cut(s)	118, 595, 724, 1020, 1039, 1180, 1537, 1578, 1792
BseJI	GATNNNNATC	1 cut(s)	308
BseMI	GCAATG	2 cut(s)	789, 1412
BseMII	CTCAG	6 cut(s)	494, 510, 528, 1127, 1316, 1451
BseNI	ACTGG	6 cut(s)	667, 806, 1071, 1404, 1460, 1586
BseRI	GAGGAG	1 cut(s)	236
BseSI	GKGCMC	1 cut(s)	1525
BsgI	GTGCAG	1 cut(s)	1382
Bsh1236I	CGCG	1 cut(s)	24
BshFI	GGCC	7 cut(s)	59, 346, 1664, 1672, 1710, 1984, 1993
BshNI	GGYRCC	1 cut(s)	1148
BsiHKAI	GWGCWC	1 cut(s)	1525
BsiSI	CCGG	5 cut(s)	281, 879, 930, 1526, 1661
BsiWI	CGTACG	1 cut(s)	1854
BslFI	GGGAC	3 cut(s)	1145, 1283, 1745
BsmAI	GTCTC	3 cut(s)	919, 1320, 2007
BsmBI	CGTCTC	1 cut(s)	919
BsmFI	GGGAC	3 cut(s)	1145, 1283, 1745
BsmI	GAATGC	2 cut(s)	577, 1126
BsnI	GGCC	7 cut(s)	59, 346, 1664, 1672, 1710, 1984, 1993
Bso31I	GGTCTC	1 cut(s)	2007
Bsp1286I	GDGCHC	1 cut(s)	1525
Bsp1407I	TGTACA	1 cut(s)	1575
Bsp143I	GATC	9 cut(s)	241, 309, 419, 499, 908, 1006, 1018, 1409, 1774
Bsp1720I	GCTNAGC	1 cut(s)	519
Bsp19I	CCATGG	1 cut(s)	1080
BspACI	CCGC	5 cut(s)	1376, 1484, 1490, 1796, 1956
BspANI	GGCC	7 cut(s)	59, 346, 1664, 1672, 1710, 1984, 1993
BspCNI	CTCAG	6 cut(s)	493, 511, 529, 1126, 1315, 1450
BspFNI	CGCG	1 cut(s)	24
BspLI	GGNNCC	6 cut(s)	345, 928, 1150, 1298, 1299, 1548
BspMAI	CTGCAG	2 cut(s)	532, 835
BspMI	ACCTGC	1 cut(s)	1457
BspPI	GGATC	6 cut(s)	304, 414, 903, 1001, 1026, 1417
BspT107I	GGYRCC	1 cut(s)	1148
BspTI	CTTAAG	1 cut(s)	550
BspTNI	GGTCTC	1 cut(s)	2007
BsrDI	GCAATG	2 cut(s)	789, 1412
BsrFI	RCCGGY	1 cut(s)	1660
BsrGI	TGTACA	1 cut(s)	1575
BsrI	ACTGG	6 cut(s)	667, 806, 1071, 1404, 1460, 1586
BssAI	RCCGGY	1 cut(s)	1660
BssECI	CCNNGG	9 cut(s)	139, 1010, 1080, 1427, 1428, 1506, 1542, 1543, 1666
BssMI	GATC	9 cut(s)	241, 309, 419, 499, 908, 1006, 1018, 1409, 1774
BssNI	GRCGYC	1 cut(s)	2054
BssSI	CACGAG	1 cut(s)	28
BssT1I	CCWWGG	4 cut(s)	139, 1080, 1506, 1666
Bst2BI	CACGAG	1 cut(s)	28
Bst2UI	CCWGG	9 cut(s)	325, 383, 596, 1012, 1386, 1429, 1544, 1562, 1949
Bst4CI	ACNGT	2 cut(s)	183, 1910
BstACI	GRCGYC	1 cut(s)	2054
BstAFI	CTTAAG	1 cut(s)	550
BstAPI	GCANNNNNTGC	1 cut(s)	1331
BstAUI	TGTACA	1 cut(s)	1575
BstC8I	GCNNGC	5 cut(s)	105, 831, 1198, 1708, 1982
BstDEI	CTNAG	9 cut(s)	480, 519, 537, 608, 635, 1025, 1113, 1302, 1437
BstDSI	CCRYGG	1 cut(s)	1080
BstF5I	GGATG	9 cut(s)	118, 595, 724, 1020, 1039, 1180, 1537, 1578, 1792
BstFNI	CGCG	1 cut(s)	24
BstH2I	RGCGCY	3 cut(s)	139, 749, 848
BstHHI	GCGC	5 cut(s)	26, 138, 436, 748, 847
BstKTI	GATC	9 cut(s)	244, 312, 422, 502, 911, 1009, 1021, 1412, 1777
BstMAI	GTCTC	3 cut(s)	919, 1320, 2007
BstMBI	GATC	9 cut(s)	241, 309, 419, 499, 908, 1006, 1018, 1409, 1774
BstNI	CCWGG	9 cut(s)	325, 383, 596, 1012, 1386, 1429, 1544, 1562, 1949
BstNSI	RCATGY	3 cut(s)	40, 230, 1144
BstSFI	CTRYAG	3 cut(s)	528, 831, 1765
BstSLI	GKGCMC	1 cut(s)	1525
BstUI	CGCG	1 cut(s)	24
BstV2I	GAAGAC	1 cut(s)	761
BstX2I	RGATCY	4 cut(s)	241, 419, 908, 1018
BstXI	CCANNNNNNTGG	3 cut(s)	1428, 1510, 1513
BstYI	RGATCY	4 cut(s)	241, 419, 908, 1018
BsuI	GTATCC	1 cut(s)	1737
BsuRI	GGCC	7 cut(s)	59, 346, 1664, 1672, 1710, 1984, 1993
BtgI	CCRYGG	1 cut(s)	1080
BtsCI	GGATG	9 cut(s)	118, 595, 724, 1020, 1039, 1180, 1537, 1578, 1792
BtsIMutI	CAGTG	5 cut(s)	179, 674, 1064, 1411, 1525
BveI	ACCTGC	1 cut(s)	1457
Cac8I	GCNNGC	5 cut(s)	105, 831, 1198, 1708, 1982
CaiI	CAGNNNCTG	1 cut(s)	536
CfoI	GCGC	5 cut(s)	26, 138, 436, 748, 847
Cfr10I	RCCGGY	1 cut(s)	1660
Cfr13I	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1547, 1628, 1663, 1670
CseI	GACGC	1 cut(s)	2062
CsiI	ACCWGGT	2 cut(s)	1560, 1947
Csp6I	GTAC	5 cut(s)	675, 695, 1576, 1855, 1906
CviQI	GTAC	5 cut(s)	675, 695, 1576, 1855, 1906
DdeI	CTNAG	9 cut(s)	480, 519, 537, 608, 635, 1025, 1113, 1302, 1437
DpnI	GATC	9 cut(s)	243, 311, 421, 501, 910, 1008, 1020, 1411, 1776
DpnII	GATC	9 cut(s)	241, 309, 419, 499, 908, 1006, 1018, 1409, 1774
DraIII	CACNNNGTG	2 cut(s)	1331, 1529
DrdI	GACNNNNNNGTC	1 cut(s)	290
DseDI	GACNNNNNNGTC	1 cut(s)	290
EciI	GGCGGA	1 cut(s)	1473
Eco130I	CCWWGG	4 cut(s)	139, 1080, 1506, 1666
Eco31I	GGTCTC	1 cut(s)	2007
Eco32I	GATATC	1 cut(s)	359
Eco47I	GGWCC	5 cut(s)	47, 863, 1297, 1547, 1628
Eco47III	AGCGCT	2 cut(s)	747, 846
Eco57I	CTGAAG	4 cut(s)	551, 1799, 1847, 1877
EcoO109I	RGGNCCY	2 cut(s)	1297, 1547
EcoRI	GAATTC	1 cut(s)	151
EcoRII	CCWGG	9 cut(s)	323, 381, 594, 1010, 1384, 1427, 1542, 1560, 1947
EcoRV	GATATC	1 cut(s)	359
EcoT14I	CCWWGG	4 cut(s)	139, 1080, 1506, 1666
EcoT22I	ATGCAT	1 cut(s)	228
ErhI	CCWWGG	4 cut(s)	139, 1080, 1506, 1666
Esp3I	CGTCTC	1 cut(s)	919
FalI	AAGNNNNNCTT	4 cut(s)	150, 182, 618, 650
FaqI	GGGAC	3 cut(s)	1145, 1283, 1745
FauI	CCCGC	1 cut(s)	1497
FauNDI	CATATG	2 cut(s)	83, 222
FblI	GTMKAC	1 cut(s)	663
FokI	GGATG	9 cut(s)	125, 602, 731, 1027, 1046, 1167, 1524, 1565, 1779
FspBI	CTAG	3 cut(s)	743, 773, 869
GlaI	GCGC	5 cut(s)	25, 137, 435, 747, 846
GsuI	CTGGAG	2 cut(s)	420, 954
HaeII	RGCGCY	3 cut(s)	139, 749, 848
HaeIII	GGCC	7 cut(s)	59, 346, 1664, 1672, 1710, 1984, 1993
HapII	CCGG	5 cut(s)	281, 879, 930, 1526, 1661
HgaI	GACGC	1 cut(s)	2062
HhaI	GCGC	5 cut(s)	26, 138, 436, 748, 847
Hin1I	GRCGYC	1 cut(s)	2054
Hin6I	GCGC	5 cut(s)	24, 136, 434, 746, 845
HinP1I	GCGC	5 cut(s)	24, 136, 434, 746, 845
HincII	GTYRAC	3 cut(s)	664, 1608, 2023
HindII	GTYRAC	3 cut(s)	664, 1608, 2023
HindIII	AAGCTT	1 cut(s)	333
HinfI	GANTC	4 cut(s)	425, 722, 1476, 1687
HpaII	CCGG	5 cut(s)	281, 879, 930, 1526, 1661
HphI	GGTGA	3 cut(s)	16, 658, 1389
Hpy166II	GTNNAC	8 cut(s)	664, 697, 706, 874, 1397, 1523, 1608, 2023
Hpy188I	TCNGA	9 cut(s)	424, 483, 570, 718, 1356, 1632, 1935, 2012, 2078
Hpy188III	TCNNGA	7 cut(s)	50, 313, 399, 497, 798, 1270, 1473
Hpy8I	GTNNAC	8 cut(s)	664, 697, 706, 874, 1397, 1523, 1608, 2023
Hpy99I	CGWCG	1 cut(s)	2056
HpyAV	CCTTC	6 cut(s)	103, 534, 1221, 1823, 1871, 1901
HpyCH4III	ACNGT	2 cut(s)	183, 1910
HpyCH4IV	ACGT	2 cut(s)	766, 2054
HpyF3I	CTNAG	9 cut(s)	480, 519, 537, 608, 635, 1025, 1113, 1302, 1437
HpySE526I	ACGT	2 cut(s)	766, 2054
Hsp92I	GRCGYC	1 cut(s)	2054
HspAI	GCGC	5 cut(s)	24, 136, 434, 746, 845
KflI	GGGWCCC	1 cut(s)	1297
Kzo9I	GATC	9 cut(s)	241, 309, 419, 499, 908, 1006, 1018, 1409, 1774
LmnI	GCTCC	3 cut(s)	401, 842, 1342
LweI	GCATC	3 cut(s)	1048, 1801, 1807
MabI	ACCWGGT	2 cut(s)	1560, 1947
MaeI	CTAG	3 cut(s)	743, 773, 869
MaeII	ACGT	2 cut(s)	766, 2054
MaeIII	GTNAC	3 cut(s)	77, 1498, 1588
MalI	GATC	9 cut(s)	243, 311, 421, 501, 910, 1008, 1020, 1411, 1776
MboI	GATC	9 cut(s)	241, 309, 419, 499, 908, 1006, 1018, 1409, 1774
MboII	GAAGA	2 cut(s)	761, 1013
MflI	RGATCY	4 cut(s)	241, 419, 908, 1018
MhlI	GDGCHC	1 cut(s)	1525
MluCI	AATT	6 cut(s)	7, 151, 202, 484, 1223, 1240
MlyI	GAGTC	2 cut(s)	434, 1681
MmeI	TCCRAC	1 cut(s)	165
Mph1103I	ATGCAT	1 cut(s)	228
MroXI	GAANNNNTTC	1 cut(s)	726
MseI	TTAA	4 cut(s)	120, 551, 945, 1920
MslI	CAYNNNNRTG	3 cut(s)	225, 730, 1508
MspA1I	CMGCKG	2 cut(s)	1492, 2066
MspCI	CTTAAG	1 cut(s)	550
MspI	CCGG	5 cut(s)	281, 879, 930, 1526, 1661
Mva1269I	GAATGC	2 cut(s)	577, 1126
MvaI	CCWGG	9 cut(s)	325, 383, 596, 1012, 1386, 1429, 1544, 1562, 1949
MvnI	CGCG	1 cut(s)	24
NciI	CCSGG	1 cut(s)	1527
NcoI	CCATGG	1 cut(s)	1080
NdeI	CATATG	2 cut(s)	83, 222
NdeII	GATC	9 cut(s)	241, 309, 419, 499, 908, 1006, 1018, 1409, 1774
NlaIV	GGNNCC	6 cut(s)	345, 928, 1150, 1298, 1299, 1548
NmeAIII	GCCGAG	1 cut(s)	372
NmuCI	GTSAC	1 cut(s)	77
NsiI	ATGCAT	1 cut(s)	228
NspI	RCATGY	3 cut(s)	40, 230, 1144
OliI	CACNNNNGTG	1 cut(s)	1508
PasI	CCCWGGG	2 cut(s)	1428, 1543
PciI	ACATGT	1 cut(s)	1140
PcsI	WCGNNNNNNNCGW	1 cut(s)	2016
PctI	GAATGC	2 cut(s)	577, 1126
PdmI	GAANNNNTTC	1 cut(s)	726
PfeI	GAWTC	2 cut(s)	722, 1476
Pfl23II	CGTACG	1 cut(s)	1854
PflMI	CCANNNNNTGG	3 cut(s)	256, 1391, 1406
PleI	GAGTC	2 cut(s)	433, 1681
PpsI	GAGTC	2 cut(s)	433, 1681
PpuMI	RGGWCCY	2 cut(s)	1297, 1547
PscI	ACATGT	1 cut(s)	1140
Psp5II	RGGWCCY	2 cut(s)	1297, 1547
Psp6I	CCWGG	9 cut(s)	323, 381, 594, 1010, 1384, 1427, 1542, 1560, 1947
PspGI	CCWGG	9 cut(s)	323, 381, 594, 1010, 1384, 1427, 1542, 1560, 1947
PspLI	CGTACG	1 cut(s)	1854
PspN4I	GGNNCC	6 cut(s)	345, 928, 1150, 1298, 1299, 1548
PspPI	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1547, 1628, 1663, 1670
PspPPI	RGGWCCY	2 cut(s)	1297, 1547
PstI	CTGCAG	2 cut(s)	532, 835
PstNI	CAGNNNCTG	1 cut(s)	536
PsuI	RGATCY	4 cut(s)	241, 419, 908, 1018
PvuII	CAGCTG	1 cut(s)	2066
RsaI	GTAC	5 cut(s)	676, 696, 1577, 1856, 1907
RsaNI	GTAC	5 cut(s)	675, 695, 1576, 1855, 1906
RseI	CAYNNNNRTG	3 cut(s)	225, 730, 1508
SalI	GTCGAC	1 cut(s)	662
SaqAI	TTAA	4 cut(s)	120, 551, 945, 1920
Sau3AI	GATC	9 cut(s)	241, 309, 419, 499, 908, 1006, 1018, 1409, 1774
Sau96I	GGNCC	9 cut(s)	47, 57, 344, 863, 1297, 1547, 1628, 1663, 1670
SchI	GAGTC	2 cut(s)	434, 1681
SduI	GDGCHC	1 cut(s)	1525
SexAI	ACCWGGT	2 cut(s)	1560, 1947
SfaNI	GCATC	3 cut(s)	1048, 1801, 1807
SfcI	CTRYAG	3 cut(s)	528, 831, 1765
SfiI	GGCCNNNNNGGCC	1 cut(s)	1990
SinI	GGWCC	5 cut(s)	47, 863, 1297, 1547, 1628
SmiMI	CAYNNNNRTG	3 cut(s)	225, 730, 1508
SmlI	CTYRAG	4 cut(s)	550, 916, 1551, 2036
SmoI	CTYRAG	4 cut(s)	550, 916, 1551, 2036
Sse9I	AATT	6 cut(s)	7, 151, 202, 484, 1223, 1240
SsiI	CCGC	5 cut(s)	1376, 1484, 1490, 1796, 1956
SspMI	CTAG	3 cut(s)	743, 773, 869
StyI	CCWWGG	4 cut(s)	139, 1080, 1506, 1666
TaaI	ACNGT	2 cut(s)	183, 1910
TaiI	ACGT	2 cut(s)	769, 2057
TaqI	TCGA	6 cut(s)	69, 663, 710, 986, 1474, 1988
TaqII	GACCGA	1 cut(s)	35
TasI	AATT	6 cut(s)	7, 151, 202, 484, 1223, 1240
TatI	WGTACW	1 cut(s)	1575
TauI	GCSGC	1 cut(s)	1378
TfiI	GAWTC	2 cut(s)	722, 1476
Tru1I	TTAA	4 cut(s)	120, 551, 945, 1920
Tru9I	TTAA	4 cut(s)	120, 551, 945, 1920
TscAI	CASTG	5 cut(s)	186, 674, 1071, 1411, 1525
TseFI	GTSAC	1 cut(s)	77
Tsp45I	GTSAC	1 cut(s)	77
TspDTI	ATGAA	4 cut(s)	77, 209, 735, 798
TspGWI	ACGGA	3 cut(s)	575, 901, 1308
TspRI	CASTG	5 cut(s)	186, 674, 1071, 1411, 1525
Van91I	CCANNNNNTGG	3 cut(s)	256, 1391, 1406
Vha464I	CTTAAG	1 cut(s)	550
VneI	GTGCAC	1 cut(s)	1521
VpaK11BI	GGWCC	5 cut(s)	47, 863, 1297, 1547, 1628
XapI	RAATTY	3 cut(s)	151, 484, 1240
XceI	RCATGY	3 cut(s)	40, 230, 1144
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1425, 1510
XmiI	GTMKAC	1 cut(s)	663
XmnI	GAANNNNTTC	1 cut(s)	726
XspI	CTAG	3 cut(s)	743, 773, 869
ZraI	GACGTC	1 cut(s)	2055
Zsp2I	ATGCAT	1 cut(s)	228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.