Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0011568

Physical Location & Seq

Genomic Coordinates Forward (+)

25860554 .. 25864711

Gene Structure 4158 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1199400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGAGCAACCCAGAAGAAGAGAGGGCTTCAAACATGCAGTCTGTATTCTCAGGTTTTGTACTTGACCCTGAAAAATGTAGCAGCCTAAGCTTGGGAGAAAAGAGAGAACTAGTCCGTGAGATCGCCAAATGGTCAAACGATGCCCCAGAGATTCTAAGTTCCTTTACCCGTAGGGAGCTTCTTGAAATTATCTGCGCCGAGATGGGTAAAGAGAGGAAGTACAGAGGATATTCAAAACATCTAATGATACAGCAGCTTCTGAAGGTAATTGATTTGAATTCTAAGAGCAATACTAATGGTAATCCTGAAGTTGCTCAAGCCAAAATTCAAACTGGAAAGAAAAGGAAAAGGGAAGCTTCCTTTCAACCTCTCTCTGACACAGGTCATGTTTCTCCGGTGACAACTAAAGAAGGAAATCCTAAAATCCAAGTTTGTCATAATGTAGCATGCAGAGCTGTCTTCGGGTTAGAGGAGTCTTTTTGCAAAAGATGTTCTTGTTGTATCTGTCATCTTTTCGATGATAACAAGGATCCTAGTCTATGGTTGACCTGTGGCTCTAATTCTGCTGATGAGAATGGTCCATGTGGAATGTCATGTCATCTGGAATGTGCTCTAATGCATGAAAAATCTGGCTTTATGAAGAGTGGGTTCTGTCCAGAATTGGATGGAAGCTTCTATTGCGTTGCTTGTGGAAGGGTTAATGATTTAATGAGAACCTGGAGAAAACAATTGATGATCGCAAAGGAGGCTAGAAGAGTGGATGTACTGTGTCTACGAATTTCTCTATCTTACAAAATTCTTTTAGGAACGAAGAAATACCAAAATCTGCAGAACACAGTAGGAACTGCGATGAAAAAACTGAAAAATGAAGTAGGGCCTTTGGAACAGGTCTGTGCAAAGATGGCACGTGGAATTGTTAACAGGCTCTCTTGTGGTGCTGAAGTTCAGAAATTGTGCAGTGCAGCAGTGGAAACGTTTGACACACTGTTTTCTGTTCCTTGCCCTGTCCATGCAGAAAAGGAAGAGCAAGCCACTTGCTGCATCCAGTTTGAAGACTCATCCCCGACTTCTGTTGTCATTGTGCTAGAATATGAGGACCGACTTTTTAATAACTTCTTGGGTTGCAGGCTGTGGTATCGTAAGTCTGATGCGAAGGATTACCCAGACCAACCCTCTTTCATTGTTTTGAGGCCTGAGAAGAAATTTAGCATCACCAATCTCCATCCCTCATCTGAATATTTCTGCAAGGTTTCTCTGTTTAGCAACTCAGGAATATTGGGAGTTTGGGAAGCTAAATGGGTCACGCCTGCATCATATGATAGCTCTATTGTGTCAGAGAAAAAGCGGAGGGAAGAGAATGTAGTAGTTGTTCAAAATCATTCCCAAGCTGAATCAACCAATTCTAGTGACATCAAATTAGCTTCTGGAGACCGTCCCGCAAATCTTCAGTTATCAGATGGCGTTGGCAAGAACCAGAGCAAACGTCTCTACTCATTGCCTCCTTTAACTGAAACTGTTTCTTTGATCAAGGATGCAGTTTCTCCATTGACACCTTGTAAATCTAACGGAATGCGCAAAGTACCAGTTTTCAGATGTGCAAAGCGAGCAGAGGAAAGTGATTACGACTACTCTGTGAGAGCAATCAAATGGTTAGAGCATGAGGGCCACGTAGATGAAGATTTTAGAGTAAAATTTCTGACTTGGTTCAGTCTGAAAGCAAATGTGCAAGAACGAAGGGTGGTCAGAGTATTCGTGGACACCTTCATCGATGATCCATCAAGCTTGGCTGGTCAGCTCATTCACAGCTTTGTGGATAAGATTCGCTGCCAGCAAAAGGAAAACCAATTTCTCAGCATGGGTCTTCCACAAGGTTGTGCCATTAAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0036293 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

630

Amino Acids

70.83

Weight (kDa)

8.45

Isoelectric Point (pI)

43.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	145 - 264	2.1e-33	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	348 - 435	5.2e-19	VIN3-like, fibronectin type-III domain
VIN3_C	PF23380	538 - 610	3.2e-35	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011568)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g34860 FvH4_5g34860 FvH4_5g34860
malus_domestica	MD08G1199400.v1.1 MD15G1386900.v1.1
prunus_persica	Prupe.1G533100_v2.0.a1
pyrus_communis	pycom08g17320 pycom15g34690
rosa_chinensis	RchiOBHm_Chr7g0235781
rosa_laevigata	RLG00000001140
rosa_multiflora	Rmu_sc0002543.1_g000002 Rmu_sc0008940.1_g000010
rosa_roxburghii	Rroxscaffold_3G00225640
rosa_rugosa	Rorug07G0292600 Rorug07G0292700
rosa_samantha	Rh7AG447600 Rh7BG419800 Rh7CG468100 Rh7DG436600
rosa_wichuraiana	Rw7G037190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1574
AccI	GTMKAC	1 cut(s)	772
AciI	CCGC	2 cut(s)	1345, 1437
AclI	AACGTT	1 cut(s)	974
AclWI	GGATC	3 cut(s)	524, 537, 1766
AcsI	RAATTY	7 cut(s)	277, 324, 777, 795, 1202, 1691, 1883
AcuI	CTGAAG	4 cut(s)	281, 327, 960, 1430
AcvI	CACGTG	1 cut(s)	908
AfaI	GTAC	4 cut(s)	60, 221, 765, 1581
AfiI	CCNNNNNNNGG	2 cut(s)	91, 1834
AgsI	TTSAA	8 cut(s)	30, 185, 234, 277, 329, 365, 1052, 1373
AhlI	ACTAGT	1 cut(s)	109
AjnI	CCWGG	1 cut(s)	716
Alw21I	GWGCWC	1 cut(s)	613
Alw26I	GTCTC	2 cut(s)	1422, 1490
AlwI	GGATC	3 cut(s)	524, 537, 1766
AlwNI	CAGNNNCTG	1 cut(s)	259
AoxI	GGCC	3 cut(s)	875, 1190, 1663
ApeKI	GCWGC	5 cut(s)	81, 253, 962, 1038, 1824
ApoI	RAATTY	7 cut(s)	277, 324, 777, 795, 1202, 1691, 1883
ArsI	GACNNNNNNTTYG	2 cut(s)	23, 55
AspLEI	GCGC	2 cut(s)	197, 1575
AspS9I	GGNCC	4 cut(s)	578, 875, 1096, 1663
AsuHPI	GGTGA	2 cut(s)	409, 1204
AvaII	GGWCC	2 cut(s)	578, 1096
BamHI	GGATCC	1 cut(s)	529
BbrPI	CACGTG	1 cut(s)	908
BbsI	GAAGAC	3 cut(s)	451, 1059, 1853
Bbv12I	GWGCWC	1 cut(s)	613
BbvI	GCAGC	5 cut(s)	93, 265, 974, 1025, 1811
BccI	CCATC	6 cut(s)	196, 659, 895, 1230, 1451, 1783
BciT130I	CCWGG	1 cut(s)	718
BclI	TGATCA	1 cut(s)	1524
BcoDI	GTCTC	2 cut(s)	1422, 1490
BcuI	ACTAGT	1 cut(s)	109
BfaI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
BfmI	CTRYAG	1 cut(s)	827
BisI	GCNGC	5 cut(s)	82, 254, 963, 1039, 1825
BlsI	GCNGC	5 cut(s)	83, 255, 964, 1040, 1826
Bme1390I	CCNGG	1 cut(s)	718
Bme18I	GGWCC	2 cut(s)	578, 1096
BmgT120I	GGNCC	4 cut(s)	578, 875, 1096, 1663
BmiI	GGNNCC	1 cut(s)	531
BmrFI	CCNGG	1 cut(s)	718
BmsI	GCATC	6 cut(s)	130, 1050, 1138, 1218, 1319, 1522
BoxI	GACNNNNGTC	1 cut(s)	381
BpiI	GAAGAC	3 cut(s)	451, 1059, 1853
BpmI	CTGGAG	2 cut(s)	739, 1446
Bpu10I	CCTNAGC	1 cut(s)	86
BpuEI	CTTGAG	1 cut(s)	300
Bsa29I	ATCGAT	1 cut(s)	1767
BsaAI	YACGTR	2 cut(s)	908, 1669
BsaI	GGTCTC	1 cut(s)	1422
BsaWI	WCCGGW	1 cut(s)	394
Bsc4I	CCNNNNNNNGG	2 cut(s)	91, 1834
Bse1I	ACTGG	3 cut(s)	337, 1045, 1583
Bse3DI	GCAATG	1 cut(s)	1493
BseBI	CCWGG	1 cut(s)	718
BseCI	ATCGAT	1 cut(s)	1767
BseGI	GGATG	6 cut(s)	670, 766, 1041, 1058, 1222, 1537
BseLI	CCNNNNNNNGG	2 cut(s)	91, 1834
BseMI	GCAATG	1 cut(s)	1493
BseMII	CTCAG	4 cut(s)	63, 1185, 1281, 1864
BseNI	ACTGG	3 cut(s)	337, 1045, 1583
BseRI	GAGGAG	1 cut(s)	485
BseXI	GCAGC	5 cut(s)	93, 265, 974, 1025, 1811
BsgI	GTGCAG	2 cut(s)	976, 981
BshFI	GGCC	3 cut(s)	877, 1192, 1665
BshVI	ATCGAT	1 cut(s)	1767
BsiHKAI	GWGCWC	1 cut(s)	613
BsiSI	CCGG	1 cut(s)	395
BslFI	GGGAC	1 cut(s)	1419
BslI	CCNNNNNNNGG	2 cut(s)	91, 1834
BsmAI	GTCTC	2 cut(s)	1422, 1490
BsmBI	CGTCTC	1 cut(s)	1490
BsmFI	GGGAC	1 cut(s)	1419
BsmI	GAATGC	1 cut(s)	1575
BsnI	GGCC	3 cut(s)	877, 1192, 1665
Bso31I	GGTCTC	1 cut(s)	1422
Bsp1286I	GDGCHC	1 cut(s)	613
Bsp143I	GATC	5 cut(s)	120, 529, 735, 1524, 1771
BspACI	CCGC	2 cut(s)	1345, 1437
BspANI	GGCC	3 cut(s)	877, 1192, 1665
BspCNI	CTCAG	4 cut(s)	62, 1186, 1280, 1863
BspDI	ATCGAT	1 cut(s)	1767
BspLI	GGNNCC	1 cut(s)	531
BspMAI	CTGCAG	1 cut(s)	831
BspPI	GGATC	3 cut(s)	524, 537, 1766
BspQI	GCTCTTC	1 cut(s)	1017
BspTNI	GGTCTC	1 cut(s)	1422
BsrDI	GCAATG	1 cut(s)	1493
BsrI	ACTGG	3 cut(s)	337, 1045, 1583
BssMI	GATC	5 cut(s)	120, 529, 735, 1524, 1771
Bst2UI	CCWGG	1 cut(s)	718
Bst4CI	ACNGT	5 cut(s)	768, 838, 987, 1433, 1516
Bst6I	CTCTTC	5 cut(s)	12, 635, 748, 1017, 1347
BstBAI	YACGTR	2 cut(s)	908, 1669
BstC8I	GCNNGC	6 cut(s)	448, 1029, 1127, 1308, 1605, 1829
BstDEI	CTNAG	7 cut(s)	49, 86, 155, 282, 1194, 1267, 1850
BstF5I	GGATG	6 cut(s)	670, 766, 1041, 1058, 1222, 1537
BstHHI	GCGC	2 cut(s)	197, 1575
BstKTI	GATC	5 cut(s)	123, 532, 738, 1527, 1774
BstMAI	GTCTC	2 cut(s)	1422, 1490
BstMBI	GATC	5 cut(s)	120, 529, 735, 1524, 1771
BstMWI	GCNNNNNNNGC	6 cut(s)	87, 452, 678, 746, 902, 1604
BstNI	CCWGG	1 cut(s)	718
BstNSI	RCATGY	2 cut(s)	37, 450
BstPAI	GACNNNNGTC	1 cut(s)	381
BstSCI	CCNGG	1 cut(s)	716
BstSFI	CTRYAG	1 cut(s)	827
BstV1I	GCAGC	5 cut(s)	93, 265, 974, 1025, 1811
BstV2I	GAAGAC	3 cut(s)	451, 1059, 1853
BstX2I	RGATCY	1 cut(s)	529
BstYI	RGATCY	1 cut(s)	529
Bsu15I	ATCGAT	1 cut(s)	1767
BsuRI	GGCC	3 cut(s)	877, 1192, 1665
BsuTUI	ATCGAT	1 cut(s)	1767
BtgZI	GCGATG	1 cut(s)	863
BtsCI	GGATG	6 cut(s)	670, 766, 1041, 1058, 1222, 1537
BtsI	GCAGTG	2 cut(s)	964, 972
BtsIMutI	CAGTG	3 cut(s)	964, 972, 983
Cac8I	GCNNGC	6 cut(s)	448, 1029, 1127, 1308, 1605, 1829
CaiI	CAGNNNCTG	1 cut(s)	259
CfoI	GCGC	2 cut(s)	197, 1575
Cfr13I	GGNCC	4 cut(s)	578, 875, 1096, 1663
ClaI	ATCGAT	1 cut(s)	1767
Csp6I	GTAC	4 cut(s)	59, 220, 764, 1580
CviAII	CATG	9 cut(s)	34, 386, 447, 582, 594, 620, 1010, 1658, 1855
CviQI	GTAC	4 cut(s)	59, 220, 764, 1580
DdeI	CTNAG	7 cut(s)	49, 86, 155, 282, 1194, 1267, 1850
DpnI	GATC	5 cut(s)	122, 531, 737, 1526, 1773
DpnII	GATC	5 cut(s)	120, 529, 735, 1524, 1771
Eam1104I	CTCTTC	5 cut(s)	12, 635, 748, 1017, 1347
EarI	CTCTTC	5 cut(s)	12, 635, 748, 1017, 1347
Eco147I	AGGCCT	1 cut(s)	1192
Eco31I	GGTCTC	1 cut(s)	1422
Eco47I	GGWCC	2 cut(s)	578, 1096
Eco57I	CTGAAG	4 cut(s)	281, 327, 960, 1430
Eco72I	CACGTG	1 cut(s)	908
EcoO109I	RGGNCCY	1 cut(s)	875
EcoRI	GAATTC	1 cut(s)	277
EcoRII	CCWGG	1 cut(s)	716
EcoT22I	ATGCAT	1 cut(s)	621
Esp3I	CGTCTC	1 cut(s)	1490
FaeI	CATG	9 cut(s)	37, 389, 450, 585, 597, 623, 1013, 1661, 1858
FalI	AAGNNNNNCTT	4 cut(s)	340, 372, 478, 510
FaqI	GGGAC	1 cut(s)	1419
FatI	CATG	9 cut(s)	33, 385, 446, 581, 593, 619, 1009, 1657, 1854
FauI	CCCGC	1 cut(s)	1444
FauNDI	CATATG	1 cut(s)	1315
FbaI	TGATCA	1 cut(s)	1524
FblI	GTMKAC	1 cut(s)	772
Fnu4HI	GCNGC	5 cut(s)	82, 254, 963, 1039, 1825
FokI	GGATG	6 cut(s)	677, 773, 1028, 1045, 1209, 1544
Fsp4HI	GCNGC	5 cut(s)	82, 254, 963, 1039, 1825
FspBI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
FspI	TGCGCA	1 cut(s)	1574
GlaI	GCGC	2 cut(s)	196, 1574
GluI	GCNGC	5 cut(s)	82, 254, 963, 1039, 1825
GsuI	CTGGAG	2 cut(s)	739, 1446
HaeIII	GGCC	3 cut(s)	877, 1192, 1665
HapII	CCGG	1 cut(s)	395
HhaI	GCGC	2 cut(s)	197, 1575
Hin1II	CATG	9 cut(s)	37, 389, 450, 585, 597, 623, 1013, 1661, 1858
Hin6I	GCGC	2 cut(s)	195, 1573
HinP1I	GCGC	2 cut(s)	195, 1573
HincII	GTYRAC	2 cut(s)	546, 919
HindII	GTYRAC	2 cut(s)	546, 919
HindIII	AAGCTT	4 cut(s)	88, 354, 670, 1780
HinfI	GANTC	5 cut(s)	151, 473, 1055, 1391, 1819
HpaI	GTTAAC	1 cut(s)	919
HpaII	CCGG	1 cut(s)	395
HphI	GGTGA	2 cut(s)	409, 1204
Hpy166II	GTNNAC	4 cut(s)	546, 773, 919, 1756
Hpy188III	TCNNGA	6 cut(s)	182, 305, 602, 656, 1269, 1425
Hpy8I	GTNNAC	4 cut(s)	546, 773, 919, 1756
HpyAV	CCTTC	6 cut(s)	256, 404, 687, 1147, 1728, 1771
HpyCH4III	ACNGT	5 cut(s)	768, 838, 987, 1433, 1516
HpyCH4IV	ACGT	4 cut(s)	907, 974, 1483, 1668
HpyF10VI	GCNNNNNNNGC	6 cut(s)	87, 452, 678, 746, 902, 1604
HpyF3I	CTNAG	7 cut(s)	49, 86, 155, 282, 1194, 1267, 1850
HpySE526I	ACGT	4 cut(s)	907, 974, 1483, 1668
Hsp92II	CATG	9 cut(s)	37, 389, 450, 585, 597, 623, 1013, 1661, 1858
HspAI	GCGC	2 cut(s)	195, 1573
Ksp22I	TGATCA	1 cut(s)	1524
KspAI	GTTAAC	1 cut(s)	919
Kzo9I	GATC	5 cut(s)	120, 529, 735, 1524, 1771
LguI	GCTCTTC	1 cut(s)	1017
LmnI	GCTCC	1 cut(s)	175
Lsp1109I	GCAGC	5 cut(s)	93, 265, 974, 1025, 1811
LweI	GCATC	6 cut(s)	130, 1050, 1138, 1218, 1319, 1522
MaeI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
MaeII	ACGT	4 cut(s)	907, 974, 1483, 1668
MaeIII	GTNAC	3 cut(s)	397, 1300, 1406
MalI	GATC	5 cut(s)	122, 531, 737, 1526, 1773
MboI	GATC	5 cut(s)	120, 529, 735, 1524, 1771
MfeI	CAATTG	1 cut(s)	728
MflI	RGATCY	1 cut(s)	529
MhlI	GDGCHC	1 cut(s)	613
MlyI	GAGTC	2 cut(s)	482, 1049
Mph1103I	ATGCAT	1 cut(s)	621
MseI	TTAA	6 cut(s)	699, 707, 918, 1107, 1505, 1881
MslI	CAYNNNNRTG	1 cut(s)	1671
MspI	CCGG	1 cut(s)	395
MspR9I	CCNGG	1 cut(s)	718
MunI	CAATTG	1 cut(s)	728
Mva1269I	GAATGC	1 cut(s)	1575
MvaI	CCWGG	1 cut(s)	718
MwoI	GCNNNNNNNGC	6 cut(s)	87, 452, 678, 746, 902, 1604
NdeI	CATATG	1 cut(s)	1315
NdeII	GATC	5 cut(s)	120, 529, 735, 1524, 1771
NlaIII	CATG	9 cut(s)	37, 389, 450, 585, 597, 623, 1013, 1661, 1858
NlaIV	GGNNCC	1 cut(s)	531
NmeAIII	GCCGAG	1 cut(s)	223
NmuCI	GTSAC	3 cut(s)	397, 1300, 1406
NsbI	TGCGCA	1 cut(s)	1574
NsiI	ATGCAT	1 cut(s)	621
NspI	RCATGY	2 cut(s)	37, 450
PaeI	GCATGC	1 cut(s)	450
PceI	AGGCCT	1 cut(s)	1192
PciSI	GCTCTTC	1 cut(s)	1017
PctI	GAATGC	1 cut(s)	1575
PfeI	GAWTC	3 cut(s)	151, 1391, 1819
PkrI	GCNGC	5 cut(s)	83, 255, 964, 1040, 1826
PleI	GAGTC	2 cut(s)	481, 1049
PmaCI	CACGTG	1 cut(s)	908
PmlI	CACGTG	1 cut(s)	908
PpsI	GAGTC	2 cut(s)	481, 1049
Ppu21I	YACGTR	2 cut(s)	908, 1669
PshAI	GACNNNNGTC	1 cut(s)	381
Psp1406I	AACGTT	1 cut(s)	974
Psp6I	CCWGG	1 cut(s)	716
PspCI	CACGTG	1 cut(s)	908
PspGI	CCWGG	1 cut(s)	716
PspN4I	GGNNCC	1 cut(s)	531
PspPI	GGNCC	4 cut(s)	578, 875, 1096, 1663
PsrI	GAACNNNNNNTAC	2 cut(s)	1353, 1385
PstI	CTGCAG	1 cut(s)	831
PstNI	CAGNNNCTG	1 cut(s)	259
PsuI	RGATCY	1 cut(s)	529
RsaI	GTAC	4 cut(s)	60, 221, 765, 1581
RsaNI	GTAC	4 cut(s)	59, 220, 764, 1580
RseI	CAYNNNNRTG	1 cut(s)	1671
SapI	GCTCTTC	1 cut(s)	1017
SaqAI	TTAA	6 cut(s)	699, 707, 918, 1107, 1505, 1881
SatI	GCNGC	5 cut(s)	82, 254, 963, 1039, 1825
Sau3AI	GATC	5 cut(s)	120, 529, 735, 1524, 1771
Sau96I	GGNCC	4 cut(s)	578, 875, 1096, 1663
SchI	GAGTC	2 cut(s)	482, 1049
ScrFI	CCNGG	1 cut(s)	718
SduI	GDGCHC	1 cut(s)	613
SfaNI	GCATC	6 cut(s)	130, 1050, 1138, 1218, 1319, 1522
SfcI	CTRYAG	1 cut(s)	827
SinI	GGWCC	2 cut(s)	578, 1096
SmiMI	CAYNNNNRTG	1 cut(s)	1671
SmlI	CTYRAG	1 cut(s)	315
SmoI	CTYRAG	1 cut(s)	315
SpeI	ACTAGT	1 cut(s)	109
SphI	GCATGC	1 cut(s)	450
SseBI	AGGCCT	1 cut(s)	1192
SsiI	CCGC	2 cut(s)	1345, 1437
SspI	AATATT	2 cut(s)	1238, 1275
SspMI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
StuI	AGGCCT	1 cut(s)	1192
StyD4I	CCNGG	1 cut(s)	716
TaaI	ACNGT	5 cut(s)	768, 838, 987, 1433, 1516
TaiI	ACGT	4 cut(s)	910, 977, 1486, 1671
TaqI	TCGA	2 cut(s)	516, 1767
TaqII	GACCGA	1 cut(s)	1113
TatI	WGTACW	3 cut(s)	58, 219, 763
TfiI	GAWTC	3 cut(s)	151, 1391, 1819
Tru1I	TTAA	6 cut(s)	699, 707, 918, 1107, 1505, 1881
Tru9I	TTAA	6 cut(s)	699, 707, 918, 1107, 1505, 1881
TscAI	CASTG	3 cut(s)	964, 972, 990
TseFI	GTSAC	3 cut(s)	397, 1300, 1406
TseI	GCWGC	5 cut(s)	81, 253, 962, 1038, 1824
Tsp45I	GTSAC	3 cut(s)	397, 1300, 1406
TspDTI	ATGAA	7 cut(s)	636, 653, 866, 882, 1168, 1689, 1753
TspGWI	ACGGA	2 cut(s)	104, 1581
TspRI	CASTG	3 cut(s)	964, 972, 990
VpaK11BI	GGWCC	2 cut(s)	578, 1096
XapI	RAATTY	7 cut(s)	277, 324, 777, 795, 1202, 1691, 1883
XceI	RCATGY	2 cut(s)	37, 450
XmiI	GTMKAC	1 cut(s)	772
XspI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
Zsp2I	ATGCAT	1 cut(s)	621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.