Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0011568

Physical Location & Seq

Genomic Coordinates Forward (+)

61040967 .. 61046035

Gene Structure 5069 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG447600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGCCACTTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATGAAAATTCTGCTGTAAATCTCTCGGGAGATAAAAATAGAGTCTTTGGCTCTGTTGTGAATATGAAGGACGACCCAGAAGAGAAGGCTTCAGGCATGCACTCTGCATTTTCAGGTTTTGTGCTGGACCCTGAAAAATGTAGCAGGCTAAGTTTGGGAGAGAAGAGAGAACTAGTCCATGAGATTGCCCAATGGACAAAAGAAGCTCCAGAGATGCTTAGTTCCTTTAGCCGTAAGGAGCTTGTTGAAATGATCTGTGCCGAACTGGGTGAGGAAAGGAAGTACAGAGGATATACGAAACCTAGACTGATAGATCGCCTGCTAAAGTCAGTTTCTGAGAAATCAAAGAGTAATACTAACAGTAATCCTGCATTTTCACCGGTCAAAGTAGAAATTGGAAAGAAAAGGAAACAGAGCACAGAAGCTTCCTTTCAACCATTCACTGACCAAGGTCGTGTTTCCATGGTGACTAGTAAAGAAGAACATGCTAAATTCCAACTTTGTCAGAATGCAGCATGCAGAGCTCCCTTAAGTTCAGAGCAATCTTTTTGCAAGAGATGTTCTTGCTGTATCTGCCATCTTTTTGATGATAACAAGGATCCTAGTCTATGGTTGACTTGTGACTCTGACACTGTTGATAAGAATGGTCCATGTGGAATGTCATGCCATCTGGAATGTGCTCTCAAACATGAAAGAGCTGGGATTGTGAAGAATGGTTGCTGTTGCCAGTTGGATGGAAGCTTCTATTGCATTGCTTGTGGAAAGGTCAATGATTTAATGAGAACGTGGAGAAAACAATTAGTGATTGCCAAGGAAGCTAGAAGAGTTGATGCACTGTGTCTAAGGATTTCTTTATCTCACAAAATTCTTTTGCATACCAAGAAATACCAAAAATTGCAGAACATTGTAGAAACTGCCATAAAAAGCCTGAACGATGAAGTAGGGCCGCTAGAACAGGTTTGTGGAAAGATGGCACGTGGAATTGTTAACAGGCTCTCTTGTGGTGCTGATGTTCAGAAACTGTGCGTTTCTGGAGTTGAATCTTTTGACTCGATGTTTTCTGAACCTTGTTCTGTCCATATGGAAAAGAAAGAACTACCAACTTGCCGCATCCAGTTTGAAGAGTCATCCCCTTCTTCCGTCGTCATTGTGCTAGAATATGAGGATCATCTTTTTAACAATTTCTTAGGCTGCCGGCTGTGGCATCGCAAGTCTGATGAGAAGGATTATCCAGACCAACCTTCTTTCATTGTTTTAAGGCCAGAGAAGAAATTTGCTATTGCTGATCTGCATCCTGCAACTGAATATTTCTGCAAGGTATCTTTGTTTAGCAACACACAGACATTGGGTGTTTGGGAAGCTAAATGGGTGACGCCTGCATTGTATGATAGCTCTGTTGCATTAGAGAAACAGACAGGGGAAGAGAATACAGTAATTGGTCAAATTCTTTCCCAAGAAGAATCAACCAATAGTAGTGACATCAAAGGAGATCGTCCTGTGAAGTTTCAGTCATCAAATGGGATCAACAAGAACCAGAAAAAAGGGCTCTACCCACTGCCTCGTTCAATGGAAACTGCTTCATTGATCAAAGAAGCAGCGTCTCCATTGACACCTTGCAAGTCCAATGGAATACGTGAAGCACCGAGCATCATATGTACAAAGCGAGTGGAGGAAAGTGATTATGAATATTCGGTCAGGGCAATTAAATGGTTAGAGCATGAGGGTCATATAGATGAAGATTTCAGAGTAAAGTTTCTAACTTGGTTCAGCCTGAAAGCTACTATGCAAGAGCGGAGAGTGGTCAGAGTGTATGTGGACACTTTCATTGATGATCCATCAAGCTTGGCTGGGCAGCTCATCCATACCTTTGTGGAAGAGATTTGTTTTCAGCCAAAAGAATACCAGTTTCTCAGCCTGGGCCTTACACAAGGTTGTGATATCAAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0036293 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

664

Amino Acids

74.91

Weight (kDa)

6.94

Isoelectric Point (pI)

43.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	183 - 303	1.2e-34	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	386 - 473	7.8e-21	VIN3-like, fibronectin type-III domain
VIN3_C	PF23380	573 - 643	1.3e-36	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011568)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g34860 FvH4_5g34860 FvH4_5g34860
malus_domestica	MD08G1199400.v1.1 MD15G1386900.v1.1
prunus_persica	Prupe.1G533100_v2.0.a1
pyrus_communis	pycom08g17320 pycom15g34690
rosa_chinensis	RchiOBHm_Chr7g0235781
rosa_laevigata	RLG00000001140
rosa_multiflora	Rmu_sc0002543.1_g000002 Rmu_sc0008940.1_g000010
rosa_roxburghii	Rroxscaffold_3G00225640
rosa_rugosa	Rorug07G0292600 Rorug07G0292700
rosa_samantha	Rh7AG447600 Rh7BG419800 Rh7CG468100 Rh7DG436600
rosa_wichuraiana	Rw7G037190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1837
AciI	CCGC	3 cut(s)	992, 1153, 1837
AclWI	GGATC	5 cut(s)	638, 651, 1218, 1574, 1871
AcsI	RAATTY	6 cut(s)	52, 536, 909, 1316, 1488, 1988
AcuI	CTGAAG	1 cut(s)	120
AcvI	CACGTG	1 cut(s)	1022
AcyI	GRCGYC	1 cut(s)	1418
AfaI	GTAC	2 cut(s)	329, 1702
AflII	CTTAAG	1 cut(s)	574
AgeI	ACCGGT	1 cut(s)	424
AgsI	TTSAA	5 cut(s)	293, 479, 1085, 1166, 1611
AhlI	ACTAGT	2 cut(s)	217, 515
AjnI	CCWGG	1 cut(s)	1959
Alw21I	GWGCWC	3 cut(s)	464, 571, 727
Alw26I	GTCTC	1 cut(s)	1650
AlwI	GGATC	5 cut(s)	638, 651, 1218, 1574, 1871
AlwNI	CAGNNNCTG	2 cut(s)	380, 1066
Ama87I	CYCGRG	1 cut(s)	70
AoxI	GGCC	3 cut(s)	989, 1304, 1963
ApeKI	GCWGC	4 cut(s)	557, 1236, 1640, 1897
ApoI	RAATTY	6 cut(s)	52, 536, 909, 1316, 1488, 1988
AsiGI	ACCGGT	1 cut(s)	424
AspS9I	GGNCC	4 cut(s)	172, 692, 989, 1963
AsuHPI	GGTGA	4 cut(s)	326, 414, 523, 1426
AvaI	CYCGRG	1 cut(s)	70
AvaII	GGWCC	2 cut(s)	172, 692
BamHI	GGATCC	1 cut(s)	643
BanII	GRGCYC	2 cut(s)	571, 1593
BbrPI	CACGTG	1 cut(s)	1022
Bbv12I	GWGCWC	3 cut(s)	464, 571, 727
BbvI	GCAGC	4 cut(s)	569, 1223, 1652, 1909
BccI	CCATC	5 cut(s)	630, 720, 773, 1009, 1888
BceAI	ACGGC	1 cut(s)	261
BciT130I	CCWGG	1 cut(s)	1961
BclI	TGATCA	1 cut(s)	1629
BcoDI	GTCTC	1 cut(s)	1650
BcuI	ACTAGT	2 cut(s)	217, 515
BfaI	CTAG	7 cut(s)	218, 348, 516, 648, 864, 995, 1199
BfrI	CTTAAG	1 cut(s)	574
BisI	GCNGC	6 cut(s)	558, 992, 1153, 1237, 1641, 1898
BlsI	GCNGC	6 cut(s)	559, 993, 1154, 1238, 1642, 1899
Bme1390I	CCNGG	1 cut(s)	1961
Bme18I	GGWCC	2 cut(s)	172, 692
BmeT110I	CYCGRG	1 cut(s)	70
BmgT120I	GGNCC	4 cut(s)	172, 692, 989, 1963
BmiI	GGNNCC	2 cut(s)	174, 645
BmrFI	CCNGG	1 cut(s)	1961
BmrI	ACTGGG	1 cut(s)	320
BmsI	GCATC	6 cut(s)	249, 865, 1164, 1258, 1345, 1701
BmuI	ACTGGG	1 cut(s)	320
BoxI	GACNNNNGTC	1 cut(s)	495
BpmI	CTGGAG	2 cut(s)	237, 1098
BsaAI	YACGTR	2 cut(s)	1022, 1679
BsaBI	GATNNNNATC	1 cut(s)	1335
BsaHI	GRCGYC	1 cut(s)	1418
BsaJI	CCNNGG	4 cut(s)	493, 507, 855, 1960
BsaWI	WCCGGW	1 cut(s)	424
Bse118I	RCCGGY	2 cut(s)	424, 1239
Bse1I	ACTGG	4 cut(s)	315, 772, 1159, 1948
Bse3DI	GCAATG	1 cut(s)	795
Bse8I	GATNNNNATC	1 cut(s)	1335
BseBI	CCWGG	1 cut(s)	1961
BseDI	CCNNGG	4 cut(s)	493, 507, 855, 1960
BseGI	GGATG	5 cut(s)	784, 1155, 1172, 1336, 1902
BseJI	GATNNNNATC	1 cut(s)	1335
BseMI	GCAATG	1 cut(s)	795
BseMII	CTCAG	2 cut(s)	372, 1969
BseNI	ACTGG	4 cut(s)	315, 772, 1159, 1948
BseXI	GCAGC	4 cut(s)	569, 1223, 1652, 1909
BseYI	CCCAGC	2 cut(s)	743, 1892
BshFI	GGCC	3 cut(s)	991, 1306, 1965
BshTI	ACCGGT	1 cut(s)	424
BsiHKAI	GWGCWC	3 cut(s)	464, 571, 727
BsiHKCI	CYCGRG	1 cut(s)	70
BsiSI	CCGG	2 cut(s)	425, 1240
BsmAI	GTCTC	1 cut(s)	1650
BsmBI	CGTCTC	1 cut(s)	1650
BsmI	GAATGC	1 cut(s)	559
BsnI	GGCC	3 cut(s)	991, 1306, 1965
BsoBI	CYCGRG	1 cut(s)	70
Bsp1286I	GDGCHC	4 cut(s)	464, 571, 727, 1593
Bsp1407I	TGTACA	1 cut(s)	1700
Bsp143I	GATC	9 cut(s)	297, 358, 643, 1210, 1330, 1534, 1566, 1629, 1876
Bsp19I	CCATGG	1 cut(s)	507
BspACI	CCGC	3 cut(s)	992, 1153, 1837
BspANI	GGCC	3 cut(s)	991, 1306, 1965
BspCNI	CTCAG	2 cut(s)	373, 1968
BspLI	GGNNCC	2 cut(s)	174, 645
BspPI	GGATC	5 cut(s)	638, 651, 1218, 1574, 1871
BspTI	CTTAAG	1 cut(s)	574
BsrBI	CCGCTC	1 cut(s)	1837
BsrDI	GCAATG	1 cut(s)	795
BsrFI	RCCGGY	2 cut(s)	424, 1239
BsrGI	TGTACA	1 cut(s)	1700
BsrI	ACTGG	4 cut(s)	315, 772, 1159, 1948
BssAI	RCCGGY	2 cut(s)	424, 1239
BssECI	CCNNGG	4 cut(s)	493, 507, 855, 1960
BssMI	GATC	9 cut(s)	297, 358, 643, 1210, 1330, 1534, 1566, 1629, 1876
BssNI	GRCGYC	1 cut(s)	1418
BssT1I	CCWWGG	3 cut(s)	493, 507, 855
Bst2UI	CCWGG	1 cut(s)	1961
Bst4CI	ACNGT	5 cut(s)	407, 679, 882, 1068, 1477
Bst6I	CTCTTC	6 cut(s)	120, 203, 862, 1161, 1461, 1914
BstACI	GRCGYC	1 cut(s)	1418
BstAFI	CTTAAG	1 cut(s)	574
BstAUI	TGTACA	1 cut(s)	1700
BstBAI	YACGTR	2 cut(s)	1022, 1679
BstC8I	GCNNGC	6 cut(s)	143, 191, 365, 562, 1241, 1422
BstDEI	CTNAG	6 cut(s)	194, 263, 381, 887, 1231, 1955
BstDSI	CCRYGG	1 cut(s)	507
BstF5I	GGATG	5 cut(s)	784, 1155, 1172, 1336, 1902
BstKTI	GATC	9 cut(s)	300, 361, 646, 1213, 1333, 1537, 1569, 1632, 1879
BstMAI	GTCTC	1 cut(s)	1650
BstMBI	GATC	9 cut(s)	297, 358, 643, 1210, 1330, 1534, 1566, 1629, 1876
BstMWI	GCNNNNNNNGC	4 cut(s)	566, 618, 792, 860
BstNI	CCWGG	1 cut(s)	1961
BstNSI	RCATGY	3 cut(s)	145, 533, 564
BstPAI	GACNNNNGTC	1 cut(s)	495
BstSCI	CCNGG	1 cut(s)	1959
BstV1I	GCAGC	4 cut(s)	569, 1223, 1652, 1909
BstX2I	RGATCY	1 cut(s)	643
BstXI	CCANNNNNNTGG	1 cut(s)	779
BstYI	RGATCY	1 cut(s)	643
BsuRI	GGCC	3 cut(s)	991, 1306, 1965
BtgI	CCRYGG	1 cut(s)	507
BtgZI	GCGATG	1 cut(s)	1235
BtsCI	GGATG	5 cut(s)	784, 1155, 1172, 1336, 1902
BtsI	GCAGTG	1 cut(s)	1598
BtsIMutI	CAGTG	4 cut(s)	486, 675, 878, 1598
Cac8I	GCNNGC	6 cut(s)	143, 191, 365, 562, 1241, 1422
CaiI	CAGNNNCTG	2 cut(s)	380, 1066
Cfr10I	RCCGGY	2 cut(s)	424, 1239
Cfr13I	GGNCC	4 cut(s)	172, 692, 989, 1963
CseI	GACGC	2 cut(s)	1426, 1632
Csp6I	GTAC	2 cut(s)	328, 1701
CspAI	ACCGGT	1 cut(s)	424
CspCI	CAANNNNNGTGG	2 cut(s)	1692, 1727
CviQI	GTAC	2 cut(s)	328, 1701
DdeI	CTNAG	6 cut(s)	194, 263, 381, 887, 1231, 1955
DpnI	GATC	9 cut(s)	299, 360, 645, 1212, 1332, 1536, 1568, 1631, 1878
DpnII	GATC	9 cut(s)	297, 358, 643, 1210, 1330, 1534, 1566, 1629, 1876
Eam1104I	CTCTTC	6 cut(s)	120, 203, 862, 1161, 1461, 1914
EarI	CTCTTC	6 cut(s)	120, 203, 862, 1161, 1461, 1914
Ecl136II	GAGCTC	1 cut(s)	569
Eco130I	CCWWGG	3 cut(s)	493, 507, 855
Eco24I	GRGCYC	2 cut(s)	571, 1593
Eco32I	GATATC	1 cut(s)	1984
Eco47I	GGWCC	2 cut(s)	172, 692
Eco53kI	GAGCTC	1 cut(s)	569
Eco57I	CTGAAG	1 cut(s)	120
Eco72I	CACGTG	1 cut(s)	1022
Eco88I	CYCGRG	1 cut(s)	70
EcoICRI	GAGCTC	1 cut(s)	569
EcoRII	CCWGG	1 cut(s)	1959
EcoRV	GATATC	1 cut(s)	1984
EcoT14I	CCWWGG	3 cut(s)	493, 507, 855
EcoT38I	GRGCYC	2 cut(s)	571, 1593
ErhI	CCWWGG	3 cut(s)	493, 507, 855
Esp3I	CGTCTC	1 cut(s)	1650
FalI	AAGNNNNNCTT	2 cut(s)	880, 912
FauNDI	CATATG	2 cut(s)	1125, 1697
FbaI	TGATCA	1 cut(s)	1629
Fnu4HI	GCNGC	6 cut(s)	558, 992, 1153, 1237, 1641, 1898
FokI	GGATG	5 cut(s)	791, 1142, 1159, 1323, 1889
FriOI	GRGCYC	2 cut(s)	571, 1593
Fsp4HI	GCNGC	6 cut(s)	558, 992, 1153, 1237, 1641, 1898
FspBI	CTAG	7 cut(s)	218, 348, 516, 648, 864, 995, 1199
GluI	GCNGC	6 cut(s)	558, 992, 1153, 1237, 1641, 1898
GsaI	CCCAGC	2 cut(s)	747, 1896
GsuI	CTGGAG	2 cut(s)	237, 1098
HaeIII	GGCC	3 cut(s)	991, 1306, 1965
HapII	CCGG	2 cut(s)	425, 1240
HgaI	GACGC	2 cut(s)	1426, 1632
Hin1I	GRCGYC	1 cut(s)	1418
HincII	GTYRAC	2 cut(s)	660, 1033
HindII	GTYRAC	2 cut(s)	660, 1033
HindIII	AAGCTT	3 cut(s)	468, 784, 1885
HinfI	GANTC	6 cut(s)	87, 668, 1085, 1094, 1169, 1505
HpaI	GTTAAC	1 cut(s)	1033
HpaII	CCGG	2 cut(s)	425, 1240
HphI	GGTGA	4 cut(s)	326, 414, 523, 1426
Hpy166II	GTNNAC	3 cut(s)	660, 1033, 1861
Hpy188I	TCNGA	9 cut(s)	382, 552, 583, 673, 1062, 1108, 1261, 1790, 1850
Hpy188III	TCNNGA	5 cut(s)	72, 254, 716, 1077, 1277
Hpy8I	GTNNAC	3 cut(s)	660, 1033, 1861
Hpy99I	CGWCG	1 cut(s)	1190
HpyAV	CCTTC	5 cut(s)	106, 124, 1188, 1261, 1296
HpyCH4III	ACNGT	5 cut(s)	407, 679, 882, 1068, 1477
HpyCH4IV	ACGT	3 cut(s)	830, 1021, 1678
HpyF10VI	GCNNNNNNNGC	4 cut(s)	566, 618, 792, 860
HpyF3I	CTNAG	6 cut(s)	194, 263, 381, 887, 1231, 1955
HpySE526I	ACGT	3 cut(s)	830, 1021, 1678
Hsp92I	GRCGYC	1 cut(s)	1418
KroI	GCCGGC	1 cut(s)	1239
KroNI	GCCGGC	1 cut(s)	1241
Ksp22I	TGATCA	1 cut(s)	1629
KspAI	GTTAAC	1 cut(s)	1033
Kzo9I	GATC	9 cut(s)	297, 358, 643, 1210, 1330, 1534, 1566, 1629, 1876
LmnI	GCTCC	3 cut(s)	256, 283, 574
Lsp1109I	GCAGC	4 cut(s)	569, 1223, 1652, 1909
LweI	GCATC	6 cut(s)	249, 865, 1164, 1258, 1345, 1701
MaeI	CTAG	7 cut(s)	218, 348, 516, 648, 864, 995, 1199
MaeII	ACGT	3 cut(s)	830, 1021, 1678
MaeIII	GTNAC	4 cut(s)	511, 665, 1414, 1520
MalI	GATC	9 cut(s)	299, 360, 645, 1212, 1332, 1536, 1568, 1631, 1878
MbiI	CCGCTC	1 cut(s)	1837
MboI	GATC	9 cut(s)	297, 358, 643, 1210, 1330, 1534, 1566, 1629, 1876
MflI	RGATCY	1 cut(s)	643
MhlI	GDGCHC	4 cut(s)	464, 571, 727, 1593
MlyI	GAGTC	4 cut(s)	96, 662, 1088, 1178
MmeI	TCCRAC	2 cut(s)	565, 756
MnlI	CCTC	7 cut(s)	23, 310, 326, 1201, 1614, 1708, 1759
MroNI	GCCGGC	1 cut(s)	1239
MseI	TTAA	6 cut(s)	575, 821, 1032, 1221, 1301, 1749
MslI	CAYNNNNRTG	1 cut(s)	1776
MspCI	CTTAAG	1 cut(s)	574
MspI	CCGG	2 cut(s)	425, 1240
MspR9I	CCNGG	1 cut(s)	1961
Mva1269I	GAATGC	1 cut(s)	559
MvaI	CCWGG	1 cut(s)	1961
MwoI	GCNNNNNNNGC	4 cut(s)	566, 618, 792, 860
NaeI	GCCGGC	1 cut(s)	1241
NcoI	CCATGG	1 cut(s)	507
NdeI	CATATG	2 cut(s)	1125, 1697
NdeII	GATC	9 cut(s)	297, 358, 643, 1210, 1330, 1534, 1566, 1629, 1876
NgoMIV	GCCGGC	1 cut(s)	1239
NlaIV	GGNNCC	2 cut(s)	174, 645
NmuCI	GTSAC	4 cut(s)	511, 665, 1414, 1520
NspI	RCATGY	3 cut(s)	145, 533, 564
PaeI	GCATGC	2 cut(s)	145, 564
PctI	GAATGC	1 cut(s)	559
PdiI	GCCGGC	1 cut(s)	1241
PfeI	GAWTC	2 cut(s)	1085, 1505
PinAI	ACCGGT	1 cut(s)	424
PkrI	GCNGC	6 cut(s)	559, 993, 1154, 1238, 1642, 1899
PleI	GAGTC	4 cut(s)	95, 662, 1088, 1177
PmaCI	CACGTG	1 cut(s)	1022
PmlI	CACGTG	1 cut(s)	1022
PpsI	GAGTC	4 cut(s)	95, 662, 1088, 1177
Ppu21I	YACGTR	2 cut(s)	1022, 1679
PshAI	GACNNNNGTC	1 cut(s)	495
Psp124BI	GAGCTC	1 cut(s)	571
Psp6I	CCWGG	1 cut(s)	1959
PspCI	CACGTG	1 cut(s)	1022
PspFI	CCCAGC	2 cut(s)	743, 1892
PspGI	CCWGG	1 cut(s)	1959
PspN4I	GGNNCC	2 cut(s)	174, 645
PspPI	GGNCC	4 cut(s)	172, 692, 989, 1963
PstNI	CAGNNNCTG	2 cut(s)	380, 1066
PsuI	RGATCY	1 cut(s)	643
RsaI	GTAC	2 cut(s)	329, 1702
RsaNI	GTAC	2 cut(s)	328, 1701
RseI	CAYNNNNRTG	1 cut(s)	1776
SacI	GAGCTC	1 cut(s)	571
SaqAI	TTAA	6 cut(s)	575, 821, 1032, 1221, 1301, 1749
SatI	GCNGC	6 cut(s)	558, 992, 1153, 1237, 1641, 1898
Sau3AI	GATC	9 cut(s)	297, 358, 643, 1210, 1330, 1534, 1566, 1629, 1876
Sau96I	GGNCC	4 cut(s)	172, 692, 989, 1963
SchI	GAGTC	4 cut(s)	96, 662, 1088, 1178
ScrFI	CCNGG	1 cut(s)	1961
SduI	GDGCHC	4 cut(s)	464, 571, 727, 1593
SfaNI	GCATC	6 cut(s)	249, 865, 1164, 1258, 1345, 1701
SinI	GGWCC	2 cut(s)	172, 692
SmiMI	CAYNNNNRTG	1 cut(s)	1776
SmlI	CTYRAG	1 cut(s)	574
SmoI	CTYRAG	1 cut(s)	574
SpeI	ACTAGT	2 cut(s)	217, 515
SphI	GCATGC	2 cut(s)	145, 564
SsiI	CCGC	3 cut(s)	992, 1153, 1837
SspI	AATATT	2 cut(s)	1352, 1733
SspMI	CTAG	7 cut(s)	218, 348, 516, 648, 864, 995, 1199
SstI	GAGCTC	1 cut(s)	571
StyD4I	CCNGG	1 cut(s)	1959
StyI	CCWWGG	3 cut(s)	493, 507, 855
TaaI	ACNGT	5 cut(s)	407, 679, 882, 1068, 1477
TaiI	ACGT	3 cut(s)	833, 1024, 1681
TaqI	TCGA	1 cut(s)	1097
TaqII	GACCGA	1 cut(s)	1726
TatI	WGTACW	2 cut(s)	327, 1700
TauI	GCSGC	2 cut(s)	994, 1155
TfiI	GAWTC	2 cut(s)	1085, 1505
Tru1I	TTAA	6 cut(s)	575, 821, 1032, 1221, 1301, 1749
Tru9I	TTAA	6 cut(s)	575, 821, 1032, 1221, 1301, 1749
TscAI	CASTG	4 cut(s)	493, 682, 885, 1605
TseFI	GTSAC	4 cut(s)	511, 665, 1414, 1520
TseI	GCWGC	4 cut(s)	557, 1236, 1640, 1897
Tsp45I	GTSAC	4 cut(s)	511, 665, 1414, 1520
TspDTI	ATGAA	9 cut(s)	63, 125, 750, 996, 1282, 1614, 1743, 1794, 1858
TspGWI	ACGGA	1 cut(s)	1174
TspRI	CASTG	4 cut(s)	493, 682, 885, 1605
Vha464I	CTTAAG	1 cut(s)	574
VpaK11BI	GGWCC	2 cut(s)	172, 692
XapI	RAATTY	6 cut(s)	52, 536, 909, 1316, 1488, 1988
XceI	RCATGY	3 cut(s)	145, 533, 564
XspI	CTAG	7 cut(s)	218, 348, 516, 648, 864, 995, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.