Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0011568

Physical Location & Seq

Genomic Coordinates Forward (+)

62240988 .. 62246009

Gene Structure 5022 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG436600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGCCACTTTTCCTCTCTCTCTCTCTCCATGAAAATTCTGCTGTAAATCTCTCGGGAGATAAAAATAGAGTCTTTGGCTCTGTTGTGAATATGAAGGACGACCCAGAAGAGAAGGCTTCAGGCATGCACTCTGCATTTTCAGGTTTTGTGCTGGACCCTGAAAAATGTAGCAGGCTAAGTTTGGGAGAGAAGAGAGAACTAGTCCATGAGATTGCCCAATGGACAAAAGAAGCTCCAGAGATGCTTAGTTCCTTTAGCCGTAAGGAGCTTGTTGAAATGATCTGTGCCGAACTGGGTGAGGAAAGGAAGTACAGAGGATATACGAAACCTAGACTGATAGATCGCCTGCTAAAGTCAGTTTCTGAGAAATCAAAGAGTAATACTAACAGTAATCCTGCATTTTCTCCGGTCAAAGTAGAAATTGGAAAGAAAAGGAAACAGAGCACAGAAGCTTCCTTTCAACCATTCACTGACCAAGGTCGTGTTTCCATGGTGACTAGTAAAGAAGAACATGCTAAATTCCAACTTTGTCAGAATGCAGCATGCAGAGCTCCCTTAAGTTCAGAGCAATCTTTTTGCAAGAGATGTTCTTGCTGTATCTGCCATCTTTTTGATGATAACAAGGATCCTAGTCTATGGTTGACTTGTGACTCTGACACTGTTGATGAGAATGGTCCATGTGGAATGTCATGCCATCTGGAATGTGCTCTCAAACATGAAAGAGCTGGGATTGTGAAGAATGGTTGCTGTCGCCAGTTGGATGGAAGCTTCTATTGCATTGCTTGTGGAAAGGTCAATGATTTAATGAGAACGTGGAGAAAACAATTAGTATTTGCCAAGGAAGCTAGAAGAGTTGATGCACTGTGTCTAAGGATTTCTTTATCTCACAAAATTCTTTTGCATACCAAGAAATACCAAAAATTGCAGAACATTGTAGAAACTGCCATAAAAAGCCTGAACGATGAAGTAGGGCCGCTAGAACAGGTTTGTGGAAAGATGGCACGTGGAATTGTTAACAGGCTCTCTTGTGGTGCTGATGTTCAGAAACTGTGCGTTTCTGCATTTGAATCTTTTGACTCGATGTTTTCTGAACCTTGTTCTGTCCATATGGAAAAGAAAGAACTACCAACTTGCCGCATCCAGTTTGAAGAGTCATCCCCTTCTTCCGTCATCATTGTGCTAGAATATGAGGATCATCTTTTTAACAATTTCTTAGGCTGCCGGCTGTGGCATCGCAAGTCTGATGAGAAGGATTATCCAGACCAACCTTCTTTCATTGTTTTAAGGCCAGAGAAGAAATTTGCTATTGCTGATCTGCATCCTGCAACTGAATATTTCTGCAAGGTATCTTTGTTTAGCAACACACAGACATTGGGTGTTTGGGAAGCTAAATGGGTGACGCCTGCATTGTATGATAGCTCTGTTGCATTAGAGAAACAGACAGGGGAAGAGAATACAGTAATTGGTCAAATTCTTTCCCAAGAAGAATCAACCAATAGTAGTGACATCAAAGGAGATCGTCCTGTGAAGTTTCAGTCATCAAATGGGATCAACAAGAACCAGAAAAAAGGGCTCTACCCACCGCCTCGTTCAATGGAAACTGCTTCATTGATCAAAGAAGCAGCGTCTCCATTGACACCTTGCAAGTCCAATGGAATACGTGAAGCACCGAGCATCAAATGTACAAAGCGAGTGGAGGAAAGTGATTATGAATATTCGGTGAGGGCAATTAAATGGTTAGAGCATGAGGGTCACATAGATGAAGATTTCAGAGTAAAGTTTCTAACTTGGTTCAGCCTGAAAGCTACTATGCAAGAGCGGAGAGTGGTCAGAGTGTATGTGGACACTTTCATTGATGATCCATCAAGCTTGGCTGGGCAGCTCATCCATACCTTTGTGGAAGAGATTTGTTTTCAGCCAAAAGAATACCAGTTTCTCAGCCTGGGCCTTACACAAGGTTGTGATGTCAAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0036293 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

658

Amino Acids

74.46

Weight (kDa)

6.95

Isoelectric Point (pI)

44.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	177 - 297	2.6e-35	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	380 - 467	1.3e-20	VIN3-like, fibronectin type-III domain
VIN3_C	PF23380	567 - 637	1.3e-36	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011568)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g34860 FvH4_5g34860 FvH4_5g34860
malus_domestica	MD08G1199400.v1.1 MD15G1386900.v1.1
prunus_persica	Prupe.1G533100_v2.0.a1
pyrus_communis	pycom08g17320 pycom15g34690
rosa_chinensis	RchiOBHm_Chr7g0235781
rosa_laevigata	RLG00000001140
rosa_multiflora	Rmu_sc0002543.1_g000002 Rmu_sc0008940.1_g000010
rosa_roxburghii	Rroxscaffold_3G00225640
rosa_rugosa	Rorug07G0292600 Rorug07G0292700
rosa_samantha	Rh7AG447600 Rh7BG419800 Rh7CG468100 Rh7DG436600
rosa_wichuraiana	Rw7G037190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1819
AciI	CCGC	4 cut(s)	974, 1135, 1583, 1819
AclWI	GGATC	5 cut(s)	620, 633, 1200, 1556, 1853
AcsI	RAATTY	6 cut(s)	34, 518, 891, 1298, 1470, 1970
AcuI	CTGAAG	1 cut(s)	102
AcvI	CACGTG	1 cut(s)	1004
AcyI	GRCGYC	1 cut(s)	1400
AfaI	GTAC	2 cut(s)	311, 1684
AflII	CTTAAG	1 cut(s)	556
AgsI	TTSAA	5 cut(s)	275, 461, 1067, 1148, 1593
AhlI	ACTAGT	2 cut(s)	199, 497
AjnI	CCWGG	1 cut(s)	1941
Alw21I	GWGCWC	3 cut(s)	446, 553, 709
Alw26I	GTCTC	1 cut(s)	1632
AlwI	GGATC	5 cut(s)	620, 633, 1200, 1556, 1853
AlwNI	CAGNNNCTG	2 cut(s)	362, 1048
Ama87I	CYCGRG	1 cut(s)	52
AoxI	GGCC	3 cut(s)	971, 1286, 1945
ApeKI	GCWGC	4 cut(s)	539, 1218, 1622, 1879
ApoI	RAATTY	6 cut(s)	34, 518, 891, 1298, 1470, 1970
AspS9I	GGNCC	4 cut(s)	154, 674, 971, 1945
AsuHPI	GGTGA	4 cut(s)	308, 505, 1408, 1732
AvaI	CYCGRG	1 cut(s)	52
AvaII	GGWCC	2 cut(s)	154, 674
BamHI	GGATCC	1 cut(s)	625
BanII	GRGCYC	2 cut(s)	553, 1575
BbrPI	CACGTG	1 cut(s)	1004
Bbv12I	GWGCWC	3 cut(s)	446, 553, 709
BbvI	GCAGC	4 cut(s)	551, 1205, 1634, 1891
BccI	CCATC	5 cut(s)	612, 702, 755, 991, 1870
BceAI	ACGGC	1 cut(s)	243
BciT130I	CCWGG	1 cut(s)	1943
BclI	TGATCA	1 cut(s)	1611
BcoDI	GTCTC	1 cut(s)	1632
BcuI	ACTAGT	2 cut(s)	199, 497
BfaI	CTAG	7 cut(s)	200, 330, 498, 630, 846, 977, 1181
BfrI	CTTAAG	1 cut(s)	556
BisI	GCNGC	6 cut(s)	540, 974, 1135, 1219, 1623, 1880
BlsI	GCNGC	6 cut(s)	541, 975, 1136, 1220, 1624, 1881
Bme1390I	CCNGG	1 cut(s)	1943
Bme18I	GGWCC	2 cut(s)	154, 674
BmeT110I	CYCGRG	1 cut(s)	52
BmgT120I	GGNCC	4 cut(s)	154, 674, 971, 1945
BmiI	GGNNCC	2 cut(s)	156, 627
BmrFI	CCNGG	1 cut(s)	1943
BmrI	ACTGGG	1 cut(s)	302
BmsI	GCATC	6 cut(s)	231, 847, 1146, 1240, 1327, 1683
BmuI	ACTGGG	1 cut(s)	302
BoxI	GACNNNNGTC	1 cut(s)	477
BpmI	CTGGAG	1 cut(s)	219
BsaAI	YACGTR	2 cut(s)	1004, 1661
BsaBI	GATNNNNATC	1 cut(s)	1317
BsaHI	GRCGYC	1 cut(s)	1400
BsaJI	CCNNGG	4 cut(s)	475, 489, 837, 1942
BsaWI	WCCGGW	1 cut(s)	406
Bse118I	RCCGGY	1 cut(s)	1221
Bse1I	ACTGG	4 cut(s)	297, 754, 1141, 1930
Bse3DI	GCAATG	1 cut(s)	777
Bse8I	GATNNNNATC	1 cut(s)	1317
BseBI	CCWGG	1 cut(s)	1943
BseDI	CCNNGG	4 cut(s)	475, 489, 837, 1942
BseGI	GGATG	5 cut(s)	766, 1137, 1154, 1318, 1884
BseJI	GATNNNNATC	1 cut(s)	1317
BseMI	GCAATG	1 cut(s)	777
BseMII	CTCAG	2 cut(s)	354, 1951
BseNI	ACTGG	4 cut(s)	297, 754, 1141, 1930
BseXI	GCAGC	4 cut(s)	551, 1205, 1634, 1891
BseYI	CCCAGC	2 cut(s)	725, 1874
BshFI	GGCC	3 cut(s)	973, 1288, 1947
BsiHKAI	GWGCWC	3 cut(s)	446, 553, 709
BsiHKCI	CYCGRG	1 cut(s)	52
BsiSI	CCGG	2 cut(s)	407, 1222
BsmAI	GTCTC	1 cut(s)	1632
BsmBI	CGTCTC	1 cut(s)	1632
BsmI	GAATGC	1 cut(s)	541
BsnI	GGCC	3 cut(s)	973, 1288, 1947
BsoBI	CYCGRG	1 cut(s)	52
Bsp1286I	GDGCHC	4 cut(s)	446, 553, 709, 1575
Bsp1407I	TGTACA	1 cut(s)	1682
Bsp143I	GATC	9 cut(s)	279, 340, 625, 1192, 1312, 1516, 1548, 1611, 1858
Bsp19I	CCATGG	1 cut(s)	489
BspACI	CCGC	4 cut(s)	974, 1135, 1583, 1819
BspANI	GGCC	3 cut(s)	973, 1288, 1947
BspCNI	CTCAG	2 cut(s)	355, 1950
BspLI	GGNNCC	2 cut(s)	156, 627
BspPI	GGATC	5 cut(s)	620, 633, 1200, 1556, 1853
BspTI	CTTAAG	1 cut(s)	556
BsrBI	CCGCTC	1 cut(s)	1819
BsrDI	GCAATG	1 cut(s)	777
BsrFI	RCCGGY	1 cut(s)	1221
BsrGI	TGTACA	1 cut(s)	1682
BsrI	ACTGG	4 cut(s)	297, 754, 1141, 1930
BssAI	RCCGGY	1 cut(s)	1221
BssECI	CCNNGG	4 cut(s)	475, 489, 837, 1942
BssMI	GATC	9 cut(s)	279, 340, 625, 1192, 1312, 1516, 1548, 1611, 1858
BssNI	GRCGYC	1 cut(s)	1400
BssT1I	CCWWGG	3 cut(s)	475, 489, 837
Bst2UI	CCWGG	1 cut(s)	1943
Bst4CI	ACNGT	5 cut(s)	389, 661, 864, 1050, 1459
Bst6I	CTCTTC	6 cut(s)	102, 185, 844, 1143, 1443, 1896
BstACI	GRCGYC	1 cut(s)	1400
BstAFI	CTTAAG	1 cut(s)	556
BstAUI	TGTACA	1 cut(s)	1682
BstBAI	YACGTR	2 cut(s)	1004, 1661
BstC8I	GCNNGC	6 cut(s)	125, 173, 347, 544, 1223, 1404
BstDEI	CTNAG	6 cut(s)	176, 245, 363, 869, 1213, 1937
BstDSI	CCRYGG	1 cut(s)	489
BstF5I	GGATG	5 cut(s)	766, 1137, 1154, 1318, 1884
BstKTI	GATC	9 cut(s)	282, 343, 628, 1195, 1315, 1519, 1551, 1614, 1861
BstMAI	GTCTC	1 cut(s)	1632
BstMBI	GATC	9 cut(s)	279, 340, 625, 1192, 1312, 1516, 1548, 1611, 1858
BstMWI	GCNNNNNNNGC	4 cut(s)	548, 600, 774, 842
BstNI	CCWGG	1 cut(s)	1943
BstNSI	RCATGY	3 cut(s)	127, 515, 546
BstPAI	GACNNNNGTC	1 cut(s)	477
BstSCI	CCNGG	1 cut(s)	1941
BstV1I	GCAGC	4 cut(s)	551, 1205, 1634, 1891
BstX2I	RGATCY	1 cut(s)	625
BstXI	CCANNNNNNTGG	1 cut(s)	761
BstYI	RGATCY	1 cut(s)	625
BsuRI	GGCC	3 cut(s)	973, 1288, 1947
BtgI	CCRYGG	1 cut(s)	489
BtgZI	GCGATG	1 cut(s)	1217
BtsCI	GGATG	5 cut(s)	766, 1137, 1154, 1318, 1884
BtsIMutI	CAGTG	3 cut(s)	468, 657, 860
Cac8I	GCNNGC	6 cut(s)	125, 173, 347, 544, 1223, 1404
CaiI	CAGNNNCTG	2 cut(s)	362, 1048
Cfr10I	RCCGGY	1 cut(s)	1221
Cfr13I	GGNCC	4 cut(s)	154, 674, 971, 1945
CseI	GACGC	2 cut(s)	1408, 1614
Csp6I	GTAC	2 cut(s)	310, 1683
CspCI	CAANNNNNGTGG	2 cut(s)	1674, 1709
CviQI	GTAC	2 cut(s)	310, 1683
DdeI	CTNAG	6 cut(s)	176, 245, 363, 869, 1213, 1937
DpnI	GATC	9 cut(s)	281, 342, 627, 1194, 1314, 1518, 1550, 1613, 1860
DpnII	GATC	9 cut(s)	279, 340, 625, 1192, 1312, 1516, 1548, 1611, 1858
Eam1104I	CTCTTC	6 cut(s)	102, 185, 844, 1143, 1443, 1896
EarI	CTCTTC	6 cut(s)	102, 185, 844, 1143, 1443, 1896
Ecl136II	GAGCTC	1 cut(s)	551
Eco130I	CCWWGG	3 cut(s)	475, 489, 837
Eco24I	GRGCYC	2 cut(s)	553, 1575
Eco47I	GGWCC	2 cut(s)	154, 674
Eco53kI	GAGCTC	1 cut(s)	551
Eco57I	CTGAAG	1 cut(s)	102
Eco72I	CACGTG	1 cut(s)	1004
Eco88I	CYCGRG	1 cut(s)	52
EcoICRI	GAGCTC	1 cut(s)	551
EcoRII	CCWGG	1 cut(s)	1941
EcoT14I	CCWWGG	3 cut(s)	475, 489, 837
EcoT38I	GRGCYC	2 cut(s)	553, 1575
ErhI	CCWWGG	3 cut(s)	475, 489, 837
Esp3I	CGTCTC	1 cut(s)	1632
FalI	AAGNNNNNCTT	2 cut(s)	862, 894
FauNDI	CATATG	1 cut(s)	1107
FbaI	TGATCA	1 cut(s)	1611
Fnu4HI	GCNGC	6 cut(s)	540, 974, 1135, 1219, 1623, 1880
FokI	GGATG	5 cut(s)	773, 1124, 1141, 1305, 1871
FriOI	GRGCYC	2 cut(s)	553, 1575
Fsp4HI	GCNGC	6 cut(s)	540, 974, 1135, 1219, 1623, 1880
FspBI	CTAG	7 cut(s)	200, 330, 498, 630, 846, 977, 1181
GluI	GCNGC	6 cut(s)	540, 974, 1135, 1219, 1623, 1880
GsaI	CCCAGC	2 cut(s)	729, 1878
GsuI	CTGGAG	1 cut(s)	219
HaeIII	GGCC	3 cut(s)	973, 1288, 1947
HapII	CCGG	2 cut(s)	407, 1222
HgaI	GACGC	2 cut(s)	1408, 1614
Hin1I	GRCGYC	1 cut(s)	1400
HincII	GTYRAC	2 cut(s)	642, 1015
HindII	GTYRAC	2 cut(s)	642, 1015
HindIII	AAGCTT	3 cut(s)	450, 766, 1867
HinfI	GANTC	6 cut(s)	69, 650, 1067, 1076, 1151, 1487
HpaI	GTTAAC	1 cut(s)	1015
HpaII	CCGG	2 cut(s)	407, 1222
HphI	GGTGA	4 cut(s)	308, 505, 1408, 1732
Hpy166II	GTNNAC	3 cut(s)	642, 1015, 1843
Hpy188I	TCNGA	9 cut(s)	364, 534, 565, 655, 1044, 1090, 1243, 1772, 1832
Hpy188III	TCNNGA	4 cut(s)	54, 236, 698, 1259
Hpy8I	GTNNAC	3 cut(s)	642, 1015, 1843
HpyAV	CCTTC	5 cut(s)	88, 106, 1170, 1243, 1278
HpyCH4III	ACNGT	5 cut(s)	389, 661, 864, 1050, 1459
HpyCH4IV	ACGT	3 cut(s)	812, 1003, 1660
HpyF10VI	GCNNNNNNNGC	4 cut(s)	548, 600, 774, 842
HpyF3I	CTNAG	6 cut(s)	176, 245, 363, 869, 1213, 1937
HpySE526I	ACGT	3 cut(s)	812, 1003, 1660
Hsp92I	GRCGYC	1 cut(s)	1400
KroI	GCCGGC	1 cut(s)	1221
KroNI	GCCGGC	1 cut(s)	1223
Ksp22I	TGATCA	1 cut(s)	1611
KspAI	GTTAAC	1 cut(s)	1015
Kzo9I	GATC	9 cut(s)	279, 340, 625, 1192, 1312, 1516, 1548, 1611, 1858
LmnI	GCTCC	3 cut(s)	238, 265, 556
Lsp1109I	GCAGC	4 cut(s)	551, 1205, 1634, 1891
LweI	GCATC	6 cut(s)	231, 847, 1146, 1240, 1327, 1683
MaeI	CTAG	7 cut(s)	200, 330, 498, 630, 846, 977, 1181
MaeII	ACGT	3 cut(s)	812, 1003, 1660
MaeIII	GTNAC	5 cut(s)	493, 647, 1396, 1502, 1751
MalI	GATC	9 cut(s)	281, 342, 627, 1194, 1314, 1518, 1550, 1613, 1860
MbiI	CCGCTC	1 cut(s)	1819
MboI	GATC	9 cut(s)	279, 340, 625, 1192, 1312, 1516, 1548, 1611, 1858
MflI	RGATCY	1 cut(s)	625
MhlI	GDGCHC	4 cut(s)	446, 553, 709, 1575
MlyI	GAGTC	4 cut(s)	78, 644, 1070, 1160
MmeI	TCCRAC	2 cut(s)	547, 738
MnlI	CCTC	8 cut(s)	23, 292, 308, 1183, 1596, 1690, 1716, 1741
MroNI	GCCGGC	1 cut(s)	1221
MseI	TTAA	6 cut(s)	557, 803, 1014, 1203, 1283, 1731
MslI	CAYNNNNRTG	2 cut(s)	1175, 1758
MspCI	CTTAAG	1 cut(s)	556
MspI	CCGG	2 cut(s)	407, 1222
MspR9I	CCNGG	1 cut(s)	1943
Mva1269I	GAATGC	1 cut(s)	541
MvaI	CCWGG	1 cut(s)	1943
MwoI	GCNNNNNNNGC	4 cut(s)	548, 600, 774, 842
NaeI	GCCGGC	1 cut(s)	1223
NcoI	CCATGG	1 cut(s)	489
NdeI	CATATG	1 cut(s)	1107
NdeII	GATC	9 cut(s)	279, 340, 625, 1192, 1312, 1516, 1548, 1611, 1858
NgoMIV	GCCGGC	1 cut(s)	1221
NlaIV	GGNNCC	2 cut(s)	156, 627
NmuCI	GTSAC	5 cut(s)	493, 647, 1396, 1502, 1751
NspI	RCATGY	3 cut(s)	127, 515, 546
PaeI	GCATGC	2 cut(s)	127, 546
PctI	GAATGC	1 cut(s)	541
PdiI	GCCGGC	1 cut(s)	1223
PfeI	GAWTC	2 cut(s)	1067, 1487
PkrI	GCNGC	6 cut(s)	541, 975, 1136, 1220, 1624, 1881
PleI	GAGTC	4 cut(s)	77, 644, 1070, 1159
PmaCI	CACGTG	1 cut(s)	1004
PmlI	CACGTG	1 cut(s)	1004
PpsI	GAGTC	4 cut(s)	77, 644, 1070, 1159
Ppu21I	YACGTR	2 cut(s)	1004, 1661
PshAI	GACNNNNGTC	1 cut(s)	477
Psp124BI	GAGCTC	1 cut(s)	553
Psp6I	CCWGG	1 cut(s)	1941
PspCI	CACGTG	1 cut(s)	1004
PspFI	CCCAGC	2 cut(s)	725, 1874
PspGI	CCWGG	1 cut(s)	1941
PspN4I	GGNNCC	2 cut(s)	156, 627
PspPI	GGNCC	4 cut(s)	154, 674, 971, 1945
PstNI	CAGNNNCTG	2 cut(s)	362, 1048
PsuI	RGATCY	1 cut(s)	625
RsaI	GTAC	2 cut(s)	311, 1684
RsaNI	GTAC	2 cut(s)	310, 1683
RseI	CAYNNNNRTG	2 cut(s)	1175, 1758
SacI	GAGCTC	1 cut(s)	553
SaqAI	TTAA	6 cut(s)	557, 803, 1014, 1203, 1283, 1731
SatI	GCNGC	6 cut(s)	540, 974, 1135, 1219, 1623, 1880
Sau3AI	GATC	9 cut(s)	279, 340, 625, 1192, 1312, 1516, 1548, 1611, 1858
Sau96I	GGNCC	4 cut(s)	154, 674, 971, 1945
SchI	GAGTC	4 cut(s)	78, 644, 1070, 1160
ScrFI	CCNGG	1 cut(s)	1943
SduI	GDGCHC	4 cut(s)	446, 553, 709, 1575
SfaNI	GCATC	6 cut(s)	231, 847, 1146, 1240, 1327, 1683
SinI	GGWCC	2 cut(s)	154, 674
SmiMI	CAYNNNNRTG	2 cut(s)	1175, 1758
SmlI	CTYRAG	1 cut(s)	556
SmoI	CTYRAG	1 cut(s)	556
SpeI	ACTAGT	2 cut(s)	199, 497
SphI	GCATGC	2 cut(s)	127, 546
SsiI	CCGC	4 cut(s)	974, 1135, 1583, 1819
SspI	AATATT	2 cut(s)	1334, 1715
SspMI	CTAG	7 cut(s)	200, 330, 498, 630, 846, 977, 1181
SstI	GAGCTC	1 cut(s)	553
StyD4I	CCNGG	1 cut(s)	1941
StyI	CCWWGG	3 cut(s)	475, 489, 837
TaaI	ACNGT	5 cut(s)	389, 661, 864, 1050, 1459
TaiI	ACGT	3 cut(s)	815, 1006, 1663
TaqI	TCGA	1 cut(s)	1079
TatI	WGTACW	2 cut(s)	309, 1682
TauI	GCSGC	2 cut(s)	976, 1137
TfiI	GAWTC	2 cut(s)	1067, 1487
Tru1I	TTAA	6 cut(s)	557, 803, 1014, 1203, 1283, 1731
Tru9I	TTAA	6 cut(s)	557, 803, 1014, 1203, 1283, 1731
TscAI	CASTG	3 cut(s)	475, 664, 867
TseFI	GTSAC	5 cut(s)	493, 647, 1396, 1502, 1751
TseI	GCWGC	4 cut(s)	539, 1218, 1622, 1879
Tsp45I	GTSAC	5 cut(s)	493, 647, 1396, 1502, 1751
TspDTI	ATGAA	9 cut(s)	45, 107, 732, 978, 1264, 1596, 1725, 1776, 1840
TspGWI	ACGGA	1 cut(s)	1156
TspRI	CASTG	3 cut(s)	475, 664, 867
Vha464I	CTTAAG	1 cut(s)	556
VpaK11BI	GGWCC	2 cut(s)	154, 674
XapI	RAATTY	6 cut(s)	34, 518, 891, 1298, 1470, 1970
XceI	RCATGY	3 cut(s)	127, 515, 546
XspI	CTAG	7 cut(s)	200, 330, 498, 630, 846, 977, 1181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.