Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0011568

Physical Location & Seq

Genomic Coordinates Forward (+)

34473511 .. 34477422

Gene Structure 3912 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g34690.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGAGCAACCCGGAAGAAGAGAGGGCTTCAAACATGCAGTCTGTTTTCTCAGGTTTCGTACTTGACCCTGAAAAATGTAGCAGCCTAAGCTTGGGAGAAAAGAGAGAGCTAGTTCGTCAGATTGCCCAATGGTCAAAAGATGCCCCAGAGATTCTAAGTTCCTTTACTCGCAGGGAGCTTCTTGAAATTATCTGTGCCGAGATGGGTAAAGAGAGGAAGTACAGAGGATATTCAAAACATCTTATGATACAGCAGCTTCTGAAGGTAATTGAATTGAATTCTAAGAGCAATACTAACAGTAATCCTGAAGTTGCTCCTGCCAAAAATCAAACTGGAAAGAAAAGGAAAAGGGAAGCTTCCTTTCAACCTCTTTCTGATCCAGGTCATGTTTCTCCGGTGACGACTAAAGAAGGAAATCTTAAAACCCAAGTCTGTCAGAATGTAGCATGCAGAGCTACTTTCCAGTCAGAGCAGTCTTTTTGCAAAAGATGTTCTTGCTGCATCTGTCATCTTTTTGATGAGAACAAGGATCCTAGTCTATGGTTAACCTGTGGCTCTGGTACTGTTGATGAGAATGGTCCATGTGGAATGTCATGCCATCTGGAATGTGCTCTAATGCATGAAAAATCTGGCATTATCAAGAATGGTTGCTATCCAGAATTGGATGGAAGCTTCTATTGCGTTGCTTGCGGAAAGGTTAATGATTTAATGAGAACCTGGAGAAAACAATTGATGATTGCGAAGGAGGCTAGAAGAGTGGATGCACTGTGTCTACGAATTTCTCTATCTTACAAAATTCTTTTAGGAACGGAAAAATACCGAAACCTGCAGAACAGTGTAGAAACTGCCATGAAAAAACTGAACAAAGAAGTAGGGCCACTGGAACAGGTATGTGCAAAGATGGCACGTGGAATTGTTAACAGGCTCTCTTGTGGTGCTGAAGTTCAGAAGTTGTGCAATTCTGCAGTGGAGTCGTTTGACTCAATGTTTTCTGATCCTTGCCCTGTCCCTGCAGAAAAGGAAGAGCACGCAACTTGCCGCATCCAGTTTGAAGACTCGTCCCCGACTTCTGTTGTCATTGTGCTAGAATATGAGGACCAACTTTTTAACAACTTTTTGGGGTGCAGGCTGTGGTATCGTAAGTTTGATGCGAAGGATTACCCCGACCAACCCTCTTTCATTGTTTTGCGGCCTGAGAAGAAATTTACCATCACCAATCTCCATCCCTCATCTGAATATTTCTGCAAGGTTTCTCTGTTTAGCAACTCAGGAATATTGGGTGTTTGGGAAGCTAAATGGGTCACGCCTGCATCGTATGATAGCTCTGTTGTGTCAGAGAAAAAGCGAAGGGAAGAGAATGTAGTAGTTGTTCAAAACCATTCCCAAGCTGAATCAACCAATTCTAGTGACATCAAATTAGCTTCTGGAGACCATCCCGCAAATCTTCAATTATCAGATGGCGTTGACAAGAACAAGAGCAAAAGCCTCTACTCACTGCCTCCTTTAACTGAAACTGTTGCTTTGATCAAAGATGCAGTTTCTCCATCGACACCTTGTAAATCTAACGGAATGCGCAAAGTACCAGTTTTCAGATGTGCAAAGCGAGCAGAGGAAAGTGATTACGACTACTCTGTGAGAGCAATCAAATGGTTAGAGCATGAGGGCCACGTAGATGAAGATTTTAGAGTAAAATTTCTGACTTGGTTCAGTCTGAAAGCAAATGTGCAAGAACGAAGGGTGGTCAAAGTATTTGTGGATACCTTCATTGACGATCGATCAAGCTTGGCCGGCCAGCTCATTCACAGCTTCGTGGATAAGATTTGCTGCCAGCAAAAGGAAGACCAATTTCTCAGCGTGGGTCTTCCACAAGGTTGTGCCATTAAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0036293 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

630

Amino Acids

70.89

Weight (kDa)

8.11

Isoelectric Point (pI)

46.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	145 - 264	6.8e-35	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	348 - 435	7.8e-19	VIN3-like, fibronectin type-III domain
VIN3_C	PF23380	538 - 610	1.1e-34	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011568)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g34860 FvH4_5g34860 FvH4_5g34860
malus_domestica	MD08G1199400.v1.1 MD15G1386900.v1.1
prunus_persica	Prupe.1G533100_v2.0.a1
pyrus_communis	pycom08g17320 pycom15g34690
rosa_chinensis	RchiOBHm_Chr7g0235781
rosa_laevigata	RLG00000001140
rosa_multiflora	Rmu_sc0002543.1_g000002 Rmu_sc0008940.1_g000010
rosa_roxburghii	Rroxscaffold_3G00225640
rosa_rugosa	Rorug07G0292600 Rorug07G0292700
rosa_samantha	Rh7AG447600 Rh7BG419800 Rh7CG468100 Rh7DG436600
rosa_wichuraiana	Rw7G037190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1574
Acc36I	ACCTGC	1 cut(s)	834
AccI	GTMKAC	1 cut(s)	772
AciI	CCGC	4 cut(s)	690, 1039, 1189, 1437
AclWI	GGATC	4 cut(s)	371, 524, 537, 989
AcoI	YGGCCR	2 cut(s)	1785, 1789
AcsI	RAATTY	6 cut(s)	277, 777, 795, 1202, 1691, 1883
AcuI	CTGAAG	3 cut(s)	281, 327, 960
AcvI	CACGTG	1 cut(s)	908
AfaI	GTAC	4 cut(s)	60, 221, 562, 1581
AfiI	CCNNNNNNNGG	2 cut(s)	91, 1834
AgsI	TTSAA	9 cut(s)	30, 185, 234, 272, 277, 365, 1052, 1373, 1448
AjnI	CCWGG	2 cut(s)	379, 716
Alw21I	GWGCWC	2 cut(s)	613, 1029
Alw26I	GTCTC	1 cut(s)	1422
AlwI	GGATC	4 cut(s)	371, 524, 537, 989
AlwNI	CAGNNNCTG	1 cut(s)	259
AoxI	GGCC	5 cut(s)	875, 1190, 1663, 1785, 1789
ApeKI	GCWGC	4 cut(s)	81, 253, 498, 1824
ApoI	RAATTY	6 cut(s)	277, 777, 795, 1202, 1691, 1883
ArsI	GACNNNNNNTTYG	2 cut(s)	23, 55
AspLEI	GCGC	1 cut(s)	1575
AspS9I	GGNCC	4 cut(s)	578, 875, 1096, 1663
AsuC2I	CCSGG	1 cut(s)	11
AsuHPI	GGTGA	2 cut(s)	409, 1204
AvaII	GGWCC	2 cut(s)	578, 1096
BamHI	GGATCC	1 cut(s)	529
BbrPI	CACGTG	1 cut(s)	908
BbsI	GAAGAC	3 cut(s)	1059, 1845, 1853
Bbv12I	GWGCWC	2 cut(s)	613, 1029
BbvI	GCAGC	4 cut(s)	93, 265, 485, 1811
BccI	CCATC	9 cut(s)	196, 606, 659, 895, 1217, 1230, 1440, 1451, 1552
BcgI	CGANNNNNNTGC	2 cut(s)	954, 988
BciT130I	CCWGG	2 cut(s)	381, 718
BciVI	GTATCC	1 cut(s)	1750
BclI	TGATCA	1 cut(s)	1524
BcnI	CCSGG	1 cut(s)	11
BcoDI	GTCTC	1 cut(s)	1422
BfaI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
BfmI	CTRYAG	3 cut(s)	827, 963, 1011
BfuAI	ACCTGC	1 cut(s)	834
BfuI	GTATCC	1 cut(s)	1750
BisI	GCNGC	6 cut(s)	82, 254, 499, 1039, 1190, 1825
BlsI	GCNGC	6 cut(s)	83, 255, 500, 1040, 1191, 1826
Bme1390I	CCNGG	3 cut(s)	11, 381, 718
Bme18I	GGWCC	2 cut(s)	578, 1096
BmgT120I	GGNCC	4 cut(s)	578, 875, 1096, 1663
BmiI	GGNNCC	1 cut(s)	531
BmrFI	CCNGG	3 cut(s)	11, 381, 718
BmsI	GCATC	7 cut(s)	130, 510, 751, 1050, 1138, 1319, 1522
BpiI	GAAGAC	3 cut(s)	1059, 1845, 1853
BpmI	CTGGAG	2 cut(s)	739, 1446
Bpu10I	CCTNAGC	1 cut(s)	86
BpuMI	CCSGG	1 cut(s)	11
Bsa29I	ATCGAT	1 cut(s)	1774
BsaAI	YACGTR	2 cut(s)	908, 1669
BsaI	GGTCTC	1 cut(s)	1422
BsaWI	WCCGGW	1 cut(s)	394
Bsc4I	CCNNNNNNNGG	2 cut(s)	91, 1834
Bse118I	RCCGGY	1 cut(s)	1787
Bse1I	ACTGG	5 cut(s)	337, 463, 885, 1045, 1583
BseBI	CCWGG	2 cut(s)	381, 718
BseCI	ATCGAT	1 cut(s)	1774
BseGI	GGATG	5 cut(s)	670, 766, 1041, 1222, 1432
BseLI	CCNNNNNNNGG	2 cut(s)	91, 1834
BseMII	CTCAG	4 cut(s)	63, 1185, 1281, 1864
BseNI	ACTGG	5 cut(s)	337, 463, 885, 1045, 1583
BseXI	GCAGC	4 cut(s)	93, 265, 485, 1811
BsgI	GTGCAG	1 cut(s)	1144
Bsh1285I	CGRYCG	1 cut(s)	1774
BshFI	GGCC	5 cut(s)	877, 1192, 1665, 1787, 1791
BshVI	ATCGAT	1 cut(s)	1774
BsiEI	CGRYCG	1 cut(s)	1774
BsiHKAI	GWGCWC	2 cut(s)	613, 1029
BsiSI	CCGG	3 cut(s)	11, 395, 1788
BslFI	GGGAC	2 cut(s)	992, 1045
BslI	CCNNNNNNNGG	2 cut(s)	91, 1834
BsmAI	GTCTC	1 cut(s)	1422
BsmFI	GGGAC	2 cut(s)	992, 1045
BsmI	GAATGC	1 cut(s)	1575
BsnI	GGCC	5 cut(s)	877, 1192, 1665, 1787, 1791
Bso31I	GGTCTC	1 cut(s)	1422
Bsp1286I	GDGCHC	2 cut(s)	613, 1029
Bsp143I	GATC	6 cut(s)	376, 529, 994, 1524, 1771, 1775
BspACI	CCGC	4 cut(s)	690, 1039, 1189, 1437
BspANI	GGCC	5 cut(s)	877, 1192, 1665, 1787, 1791
BspCNI	CTCAG	4 cut(s)	62, 1186, 1280, 1863
BspDI	ATCGAT	1 cut(s)	1774
BspLI	GGNNCC	1 cut(s)	531
BspMAI	CTGCAG	3 cut(s)	831, 967, 1015
BspMI	ACCTGC	1 cut(s)	834
BspPI	GGATC	4 cut(s)	371, 524, 537, 989
BspQI	GCTCTTC	1 cut(s)	1017
BspTNI	GGTCTC	1 cut(s)	1422
BsrFI	RCCGGY	1 cut(s)	1787
BsrI	ACTGG	5 cut(s)	337, 463, 885, 1045, 1583
BssAI	RCCGGY	1 cut(s)	1787
BssMI	GATC	6 cut(s)	376, 529, 994, 1524, 1771, 1775
Bst2UI	CCWGG	2 cut(s)	381, 718
Bst4CI	ACNGT	5 cut(s)	299, 565, 768, 836, 1516
Bst6I	CTCTTC	4 cut(s)	12, 748, 1017, 1347
BstBAI	YACGTR	2 cut(s)	908, 1669
BstC8I	GCNNGC	9 cut(s)	448, 688, 1029, 1127, 1308, 1605, 1789, 1793, 1829
BstDEI	CTNAG	7 cut(s)	49, 86, 155, 282, 1194, 1267, 1850
BstF5I	GGATG	5 cut(s)	670, 766, 1041, 1222, 1432
BstHHI	GCGC	1 cut(s)	1575
BstKTI	GATC	6 cut(s)	379, 532, 997, 1527, 1774, 1778
BstMAI	GTCTC	1 cut(s)	1422
BstMBI	GATC	6 cut(s)	376, 529, 994, 1524, 1771, 1775
BstMCI	CGRYCG	1 cut(s)	1774
BstMWI	GCNNNNNNNGC	8 cut(s)	87, 452, 678, 687, 746, 902, 1604, 1788
BstNI	CCWGG	2 cut(s)	381, 718
BstNSI	RCATGY	2 cut(s)	37, 450
BstSCI	CCNGG	3 cut(s)	9, 379, 716
BstSFI	CTRYAG	3 cut(s)	827, 963, 1011
BstV1I	GCAGC	4 cut(s)	93, 265, 485, 1811
BstV2I	GAAGAC	3 cut(s)	1059, 1845, 1853
BstX2I	RGATCY	1 cut(s)	529
BstYI	RGATCY	1 cut(s)	529
Bsu15I	ATCGAT	1 cut(s)	1774
BsuI	GTATCC	1 cut(s)	1750
BsuRI	GGCC	5 cut(s)	877, 1192, 1665, 1787, 1791
BsuTUI	ATCGAT	1 cut(s)	1774
BtsCI	GGATG	5 cut(s)	670, 766, 1041, 1222, 1432
BtsI	GCAGTG	2 cut(s)	972, 1493
BtsIMutI	CAGTG	5 cut(s)	764, 841, 878, 972, 1493
BveI	ACCTGC	1 cut(s)	834
Cac8I	GCNNGC	9 cut(s)	448, 688, 1029, 1127, 1308, 1605, 1789, 1793, 1829
CaiI	CAGNNNCTG	1 cut(s)	259
CfoI	GCGC	1 cut(s)	1575
Cfr10I	RCCGGY	1 cut(s)	1787
Cfr13I	GGNCC	4 cut(s)	578, 875, 1096, 1663
ClaI	ATCGAT	1 cut(s)	1774
Csp6I	GTAC	4 cut(s)	59, 220, 561, 1580
CviAII	CATG	8 cut(s)	34, 386, 447, 582, 594, 620, 850, 1658
CviQI	GTAC	4 cut(s)	59, 220, 561, 1580
DdeI	CTNAG	7 cut(s)	49, 86, 155, 282, 1194, 1267, 1850
DpnI	GATC	6 cut(s)	378, 531, 996, 1526, 1773, 1777
DpnII	GATC	6 cut(s)	376, 529, 994, 1524, 1771, 1775
EaeI	YGGCCR	2 cut(s)	1785, 1789
Eam1104I	CTCTTC	4 cut(s)	12, 748, 1017, 1347
EarI	CTCTTC	4 cut(s)	12, 748, 1017, 1347
Eco31I	GGTCTC	1 cut(s)	1422
Eco47I	GGWCC	2 cut(s)	578, 1096
Eco57I	CTGAAG	3 cut(s)	281, 327, 960
Eco72I	CACGTG	1 cut(s)	908
EcoRI	GAATTC	1 cut(s)	277
EcoRII	CCWGG	2 cut(s)	379, 716
EcoT22I	ATGCAT	1 cut(s)	621
FaeI	CATG	8 cut(s)	37, 389, 450, 585, 597, 623, 853, 1661
FalI	AAGNNNNNCTT	6 cut(s)	340, 372, 402, 434, 478, 510
FaqI	GGGAC	2 cut(s)	992, 1045
FatI	CATG	8 cut(s)	33, 385, 446, 581, 593, 619, 849, 1657
FauI	CCCGC	1 cut(s)	1444
FbaI	TGATCA	1 cut(s)	1524
FblI	GTMKAC	1 cut(s)	772
Fnu4HI	GCNGC	6 cut(s)	82, 254, 499, 1039, 1190, 1825
FokI	GGATG	5 cut(s)	677, 773, 1028, 1209, 1419
FseI	GGCCGGCC	1 cut(s)	1791
Fsp4HI	GCNGC	6 cut(s)	82, 254, 499, 1039, 1190, 1825
FspBI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
FspI	TGCGCA	1 cut(s)	1574
GlaI	GCGC	1 cut(s)	1574
GluI	GCNGC	6 cut(s)	82, 254, 499, 1039, 1190, 1825
GsuI	CTGGAG	2 cut(s)	739, 1446
HaeIII	GGCC	5 cut(s)	877, 1192, 1665, 1787, 1791
HapII	CCGG	3 cut(s)	11, 395, 1788
HhaI	GCGC	1 cut(s)	1575
Hin1II	CATG	8 cut(s)	37, 389, 450, 585, 597, 623, 853, 1661
Hin6I	GCGC	1 cut(s)	1573
HinP1I	GCGC	1 cut(s)	1573
HincII	GTYRAC	3 cut(s)	546, 919, 1465
HindII	GTYRAC	3 cut(s)	546, 919, 1465
HindIII	AAGCTT	4 cut(s)	88, 354, 670, 1780
HinfI	GANTC	5 cut(s)	151, 971, 980, 1055, 1391
HpaI	GTTAAC	2 cut(s)	546, 919
HpaII	CCGG	3 cut(s)	11, 395, 1788
HphI	GGTGA	2 cut(s)	409, 1204
Hpy166II	GTNNAC	4 cut(s)	546, 773, 919, 1465
Hpy188III	TCNNGA	7 cut(s)	182, 305, 602, 640, 656, 1269, 1425
Hpy8I	GTNNAC	4 cut(s)	546, 773, 919, 1465
HpyAV	CCTTC	7 cut(s)	256, 404, 736, 1147, 1341, 1728, 1771
HpyCH4III	ACNGT	5 cut(s)	299, 565, 768, 836, 1516
HpyCH4IV	ACGT	2 cut(s)	907, 1668
HpyF10VI	GCNNNNNNNGC	8 cut(s)	87, 452, 678, 687, 746, 902, 1604, 1788
HpyF3I	CTNAG	7 cut(s)	49, 86, 155, 282, 1194, 1267, 1850
HpySE526I	ACGT	2 cut(s)	907, 1668
Hsp92II	CATG	8 cut(s)	37, 389, 450, 585, 597, 623, 853, 1661
HspAI	GCGC	1 cut(s)	1573
KroI	GCCGGC	1 cut(s)	1787
KroNI	GCCGGC	1 cut(s)	1789
Ksp22I	TGATCA	1 cut(s)	1524
KspAI	GTTAAC	2 cut(s)	546, 919
Kzo9I	GATC	6 cut(s)	376, 529, 994, 1524, 1771, 1775
LguI	GCTCTTC	1 cut(s)	1017
LmnI	GCTCC	2 cut(s)	175, 319
Lsp1109I	GCAGC	4 cut(s)	93, 265, 485, 1811
LweI	GCATC	7 cut(s)	130, 510, 751, 1050, 1138, 1319, 1522
MaeI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
MaeII	ACGT	2 cut(s)	907, 1668
MaeIII	GTNAC	3 cut(s)	397, 1300, 1406
MalI	GATC	6 cut(s)	378, 531, 996, 1526, 1773, 1777
MboI	GATC	6 cut(s)	376, 529, 994, 1524, 1771, 1775
MfeI	CAATTG	1 cut(s)	728
MflI	RGATCY	1 cut(s)	529
MhlI	GDGCHC	2 cut(s)	613, 1029
MlyI	GAGTC	3 cut(s)	974, 980, 1049
Mph1103I	ATGCAT	1 cut(s)	621
MroNI	GCCGGC	1 cut(s)	1787
MseI	TTAA	8 cut(s)	420, 545, 699, 707, 918, 1107, 1505, 1881
MslI	CAYNNNNRTG	1 cut(s)	1671
MspI	CCGG	3 cut(s)	11, 395, 1788
MspR9I	CCNGG	3 cut(s)	11, 381, 718
MunI	CAATTG	1 cut(s)	728
Mva1269I	GAATGC	1 cut(s)	1575
MvaI	CCWGG	2 cut(s)	381, 718
MwoI	GCNNNNNNNGC	8 cut(s)	87, 452, 678, 687, 746, 902, 1604, 1788
NaeI	GCCGGC	1 cut(s)	1789
NciI	CCSGG	1 cut(s)	11
NdeII	GATC	6 cut(s)	376, 529, 994, 1524, 1771, 1775
NgoMIV	GCCGGC	1 cut(s)	1787
NlaIII	CATG	8 cut(s)	37, 389, 450, 585, 597, 623, 853, 1661
NlaIV	GGNNCC	1 cut(s)	531
NmeAIII	GCCGAG	1 cut(s)	223
NmuCI	GTSAC	3 cut(s)	397, 1300, 1406
NsbI	TGCGCA	1 cut(s)	1574
NsiI	ATGCAT	1 cut(s)	621
NspI	RCATGY	2 cut(s)	37, 450
PaeI	GCATGC	1 cut(s)	450
PciSI	GCTCTTC	1 cut(s)	1017
PcsI	WCGNNNNNNNCGW	1 cut(s)	1310
PctI	GAATGC	1 cut(s)	1575
PdiI	GCCGGC	1 cut(s)	1789
PfeI	GAWTC	2 cut(s)	151, 1391
PkrI	GCNGC	6 cut(s)	83, 255, 500, 1040, 1191, 1826
Ple19I	CGATCG	1 cut(s)	1774
PleI	GAGTC	3 cut(s)	974, 979, 1049
PmaCI	CACGTG	1 cut(s)	908
PmlI	CACGTG	1 cut(s)	908
PpsI	GAGTC	3 cut(s)	974, 979, 1049
Ppu21I	YACGTR	2 cut(s)	908, 1669
Psp6I	CCWGG	2 cut(s)	379, 716
PspCI	CACGTG	1 cut(s)	908
PspGI	CCWGG	2 cut(s)	379, 716
PspN4I	GGNNCC	1 cut(s)	531
PspPI	GGNCC	4 cut(s)	578, 875, 1096, 1663
PsrI	GAACNNNNNNTAC	2 cut(s)	1353, 1385
PstI	CTGCAG	3 cut(s)	831, 967, 1015
PstNI	CAGNNNCTG	1 cut(s)	259
PsuI	RGATCY	1 cut(s)	529
PvuI	CGATCG	1 cut(s)	1774
RigI	GGCCGGCC	1 cut(s)	1791
RsaI	GTAC	4 cut(s)	60, 221, 562, 1581
RsaNI	GTAC	4 cut(s)	59, 220, 561, 1580
RseI	CAYNNNNRTG	1 cut(s)	1671
SapI	GCTCTTC	1 cut(s)	1017
SaqAI	TTAA	8 cut(s)	420, 545, 699, 707, 918, 1107, 1505, 1881
SatI	GCNGC	6 cut(s)	82, 254, 499, 1039, 1190, 1825
Sau3AI	GATC	6 cut(s)	376, 529, 994, 1524, 1771, 1775
Sau96I	GGNCC	4 cut(s)	578, 875, 1096, 1663
SchI	GAGTC	3 cut(s)	974, 980, 1049
ScrFI	CCNGG	3 cut(s)	11, 381, 718
SduI	GDGCHC	2 cut(s)	613, 1029
SfaNI	GCATC	7 cut(s)	130, 510, 751, 1050, 1138, 1319, 1522
SfcI	CTRYAG	3 cut(s)	827, 963, 1011
SinI	GGWCC	2 cut(s)	578, 1096
SmiMI	CAYNNNNRTG	1 cut(s)	1671
SphI	GCATGC	1 cut(s)	450
SsiI	CCGC	4 cut(s)	690, 1039, 1189, 1437
SspI	AATATT	2 cut(s)	1238, 1275
SspMI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
StyD4I	CCNGG	3 cut(s)	9, 379, 716
TaaI	ACNGT	5 cut(s)	299, 565, 768, 836, 1516
TaiI	ACGT	2 cut(s)	910, 1671
TaqI	TCGA	2 cut(s)	1547, 1774
TatI	WGTACW	1 cut(s)	219
TauI	GCSGC	2 cut(s)	1041, 1192
TfiI	GAWTC	2 cut(s)	151, 1391
Tru1I	TTAA	8 cut(s)	420, 545, 699, 707, 918, 1107, 1505, 1881
Tru9I	TTAA	8 cut(s)	420, 545, 699, 707, 918, 1107, 1505, 1881
TscAI	CASTG	5 cut(s)	771, 841, 885, 972, 1500
TseFI	GTSAC	3 cut(s)	397, 1300, 1406
TseI	GCWGC	4 cut(s)	81, 253, 498, 1824
Tsp45I	GTSAC	3 cut(s)	397, 1300, 1406
TspDTI	ATGAA	5 cut(s)	636, 866, 1168, 1689, 1753
TspGWI	ACGGA	2 cut(s)	824, 1581
TspRI	CASTG	5 cut(s)	771, 841, 885, 972, 1500
VpaK11BI	GGWCC	2 cut(s)	578, 1096
XapI	RAATTY	6 cut(s)	277, 777, 795, 1202, 1691, 1883
XceI	RCATGY	2 cut(s)	37, 450
XmiI	GTMKAC	1 cut(s)	772
XspI	CTAG	5 cut(s)	110, 534, 750, 1085, 1404
Zsp2I	ATGCAT	1 cut(s)	621

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.