Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0011568

Physical Location & Seq

Genomic Coordinates Forward (+)

56536379 .. 56541666

Gene Structure 5288 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G037190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGCCACTTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCCATGAAAATTCTGCTGTAAATCTCTCGGGAGATAAAAATAGAGTCTTTGGCTCTGTTGTGAATATGAAGGACGACCCAGAAGAGAAGGCTTCAGGAATGCACTCTGCATTTTCAGGTTTTGTGCTGGACCCTGAAAAATGTAGCAGGCTAAGTTTGGGAGAGAAGAGAGAACTAGTCCATGAGATTGCCCAATGGACAAAAGAAGCTCCAGAGATGCTTAGTTCCTTTAGCCGTAAGGAGCTTGTTGAAATGATCTGTGCCGAACTGGGTGAGGAAAGGAAGTACAGAGGATATACGAAACCTAGACTGATAGATCGCCTGCTAAAGTCAGTTTCTGAGAAATCAAAGAGTAATACTAACAGTAATCCTGCATTTTCTCCGGTCAAAGTAGAAATTGGAAAGAAAAGGAAACAGAGCACAGAAGCTTCCTTTCAACCATTCACTGACCAAGGTCGTGTTTCCATGGTGACTAGTAAAGAAGAACATGCTAAATTCCAACTTTGTCAGAATGCAGCATGCAGAGCTCCCTTAAGTTCAGAGCAATCTTTTTGCAAGAGATGTTCTTGCTGTATCTGCCATCTTTTTGATGATAACAAGGATCCTAGTCTATGGTTGACTTGTGACTCTGACACTGTTGATGAGAATGGTCCATGTGGAATGTCATGCCATCTGGAATGTGCTCTCAAACATGAAAGAGCTGGGATTGTGAAGAATGGTTGCTGTCGCCAGTTGGATGGAAGCTTCTATTGCATTGCTTGTGGAAAGGTCAATGATTTAATGAGAACGTGGAGAAAACAATTAGTATTTGCCAAGGAAGCTAGAAGAGTTGATGCACTGTGTCTAAGGATTTCTTTATCTCACAAAATTCTTTTGCATACCAAGAAATACCAAAAATTGCAGAACATTGTAGAAACTGCCATAAAAAGCCTGAACGATGAAGTAGGGCCGCTAGAACAGGTTTGTGGAAAGATGGCACGTGGAATTGTTAACAGGCTCTCTTGTGGTGCTGATGTTCAGAAACTGTGCGTTTCTGCATTTGAATCTTTTGACTCGATGTTTTCTGAACCTTGTTCTGTCCATATGGAAAAGAAAGAACTACCAACTTGCCGCATCCAGTTTGAAGAGTCATCCCCTTCTTCCGTCATCATTGTGCTAGAATATGAGGATCATCTTTTTAACAATTTCTTAGGCTGCCGGCTGTGGCATCGCAAGTCTGATGAGAAGGATTATCCAGACCAACCTTCTTTCATTGTTTTAAGGCCAGAGAAGAAATTTGCTATTGCTGATCTGCATCCTGCAACTGAATATTTCTGCAAGGTATCTTTGTTTAGCAACACACAGACATTGGGTGTTTGGGAAGCTAAATGGGTGACGCCTGCATTGTATGATAGCTCTGTTGCATTAGAGAAACAGACAGGGGAAGAGAATACAGTAATTGGTCAAATTCTTTCCCAAGAAGAATCAACCAATAGTAGTGACATCAAAGGAGATCGTCCTGTGAAGTTTCAGTCATCAAATGGGATCAACAAGAACCAGAAAAAAGGGCTCTACCCACCGCCTCGTTCAATGGAAACTGCTTCATTGATCAAAGAAGCAGCGTCTCCATTGACACCTTGCAAGTCCAATGGAATACGTGAAGCACCGAGCATCAAATGTACAAAGCGAGTGGAGGAAAGTGATTATGAATATTCGGTGAGGGCAATTAAATGGTTAGAGCATGAGGGTCACATAGATGAAGATTTCAGAGTAAAGTTTCTAACTTGGTTCAGCCTGAAAGCTACTATGCAAGAGCGGAGAGTGGTCAGAGTGTATGTGGACACTTTCATTGATGATCCATCAAGCTTGGCTGGGCAGCTCATCCATACCTTTGTGGAAGAGATTTGTTTTCAGCCAAAAGAATACCAGTTTCTCAGCCTGGGCCTTACACAAGGTTGTGATGTCAAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001666 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005677 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009892 GO:0009893 GO:0009987 GO:0010048 GO:0010468 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0016604 GO:0016607 GO:0017053 GO:0019222 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033043 GO:0033044 GO:0033554 GO:0036293 GO:0040029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045814 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051569 GO:0051571 GO:0051716 GO:0060255 GO:0061085 GO:0061087 GO:0065007 GO:0070013 GO:0070417 GO:0070482 GO:0080090 GO:0090568 GO:1902275 GO:1905269 GO:2001252

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD_Oberon fn3

Protein Analysis

662

Amino Acids

74.86

Weight (kDa)

6.95

Isoelectric Point (pI)

44.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD_Oberon	PF07227	181 - 301	2.6e-35	PHD - plant homeodomain finger protein
Fn3_VIN3	PF23376	384 - 471	1.3e-20	VIN3-like, fibronectin type-III domain
VIN3_C	PF23380	571 - 641	1.3e-36	VIN3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011568)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g34860 FvH4_5g34860 FvH4_5g34860
malus_domestica	MD08G1199400.v1.1 MD15G1386900.v1.1
prunus_persica	Prupe.1G533100_v2.0.a1
pyrus_communis	pycom08g17320 pycom15g34690
rosa_chinensis	RchiOBHm_Chr7g0235781
rosa_laevigata	RLG00000001140
rosa_multiflora	Rmu_sc0002543.1_g000002 Rmu_sc0008940.1_g000010
rosa_roxburghii	Rroxscaffold_3G00225640
rosa_rugosa	Rorug07G0292600 Rorug07G0292700
rosa_samantha	Rh7AG447600 Rh7BG419800 Rh7CG468100 Rh7DG436600
rosa_wichuraiana	Rw7G037190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1831
AciI	CCGC	4 cut(s)	986, 1147, 1595, 1831
AclWI	GGATC	5 cut(s)	632, 645, 1212, 1568, 1865
AcsI	RAATTY	6 cut(s)	46, 530, 903, 1310, 1482, 1982
AcuI	CTGAAG	1 cut(s)	114
AcvI	CACGTG	1 cut(s)	1016
AcyI	GRCGYC	1 cut(s)	1412
AfaI	GTAC	2 cut(s)	323, 1696
AflII	CTTAAG	1 cut(s)	568
AgsI	TTSAA	5 cut(s)	287, 473, 1079, 1160, 1605
AhlI	ACTAGT	2 cut(s)	211, 509
AjnI	CCWGG	1 cut(s)	1953
Alw21I	GWGCWC	3 cut(s)	458, 565, 721
Alw26I	GTCTC	1 cut(s)	1644
AlwI	GGATC	5 cut(s)	632, 645, 1212, 1568, 1865
AlwNI	CAGNNNCTG	2 cut(s)	374, 1060
Ama87I	CYCGRG	1 cut(s)	64
AoxI	GGCC	3 cut(s)	983, 1298, 1957
ApeKI	GCWGC	4 cut(s)	551, 1230, 1634, 1891
ApoI	RAATTY	6 cut(s)	46, 530, 903, 1310, 1482, 1982
AspS9I	GGNCC	4 cut(s)	166, 686, 983, 1957
AsuHPI	GGTGA	4 cut(s)	320, 517, 1420, 1744
AvaI	CYCGRG	1 cut(s)	64
AvaII	GGWCC	2 cut(s)	166, 686
BamHI	GGATCC	1 cut(s)	637
BanII	GRGCYC	2 cut(s)	565, 1587
BbrPI	CACGTG	1 cut(s)	1016
Bbv12I	GWGCWC	3 cut(s)	458, 565, 721
BbvI	GCAGC	4 cut(s)	563, 1217, 1646, 1903
BccI	CCATC	5 cut(s)	624, 714, 767, 1003, 1882
BceAI	ACGGC	1 cut(s)	255
BciT130I	CCWGG	1 cut(s)	1955
BclI	TGATCA	1 cut(s)	1623
BcoDI	GTCTC	1 cut(s)	1644
BcuI	ACTAGT	2 cut(s)	211, 509
BfaI	CTAG	7 cut(s)	212, 342, 510, 642, 858, 989, 1193
BfrI	CTTAAG	1 cut(s)	568
BisI	GCNGC	6 cut(s)	552, 986, 1147, 1231, 1635, 1892
BlsI	GCNGC	6 cut(s)	553, 987, 1148, 1232, 1636, 1893
Bme1390I	CCNGG	1 cut(s)	1955
Bme18I	GGWCC	2 cut(s)	166, 686
BmeT110I	CYCGRG	1 cut(s)	64
BmgT120I	GGNCC	4 cut(s)	166, 686, 983, 1957
BmiI	GGNNCC	2 cut(s)	168, 639
BmrFI	CCNGG	1 cut(s)	1955
BmrI	ACTGGG	1 cut(s)	314
BmsI	GCATC	6 cut(s)	243, 859, 1158, 1252, 1339, 1695
BmuI	ACTGGG	1 cut(s)	314
BoxI	GACNNNNGTC	1 cut(s)	489
BpmI	CTGGAG	1 cut(s)	231
BsaAI	YACGTR	2 cut(s)	1016, 1673
BsaBI	GATNNNNATC	1 cut(s)	1329
BsaHI	GRCGYC	1 cut(s)	1412
BsaJI	CCNNGG	4 cut(s)	487, 501, 849, 1954
BsaWI	WCCGGW	1 cut(s)	418
Bse118I	RCCGGY	1 cut(s)	1233
Bse1I	ACTGG	4 cut(s)	309, 766, 1153, 1942
Bse3DI	GCAATG	1 cut(s)	789
Bse8I	GATNNNNATC	1 cut(s)	1329
BseBI	CCWGG	1 cut(s)	1955
BseDI	CCNNGG	4 cut(s)	487, 501, 849, 1954
BseGI	GGATG	5 cut(s)	778, 1149, 1166, 1330, 1896
BseJI	GATNNNNATC	1 cut(s)	1329
BseMI	GCAATG	1 cut(s)	789
BseMII	CTCAG	2 cut(s)	366, 1963
BseNI	ACTGG	4 cut(s)	309, 766, 1153, 1942
BseXI	GCAGC	4 cut(s)	563, 1217, 1646, 1903
BseYI	CCCAGC	2 cut(s)	737, 1886
BshFI	GGCC	3 cut(s)	985, 1300, 1959
BsiHKAI	GWGCWC	3 cut(s)	458, 565, 721
BsiHKCI	CYCGRG	1 cut(s)	64
BsiSI	CCGG	2 cut(s)	419, 1234
BsmAI	GTCTC	1 cut(s)	1644
BsmBI	CGTCTC	1 cut(s)	1644
BsmI	GAATGC	2 cut(s)	141, 553
BsnI	GGCC	3 cut(s)	985, 1300, 1959
BsoBI	CYCGRG	1 cut(s)	64
Bsp1286I	GDGCHC	4 cut(s)	458, 565, 721, 1587
Bsp1407I	TGTACA	1 cut(s)	1694
Bsp143I	GATC	9 cut(s)	291, 352, 637, 1204, 1324, 1528, 1560, 1623, 1870
Bsp19I	CCATGG	1 cut(s)	501
BspACI	CCGC	4 cut(s)	986, 1147, 1595, 1831
BspANI	GGCC	3 cut(s)	985, 1300, 1959
BspCNI	CTCAG	2 cut(s)	367, 1962
BspLI	GGNNCC	2 cut(s)	168, 639
BspPI	GGATC	5 cut(s)	632, 645, 1212, 1568, 1865
BspTI	CTTAAG	1 cut(s)	568
BsrBI	CCGCTC	1 cut(s)	1831
BsrDI	GCAATG	1 cut(s)	789
BsrFI	RCCGGY	1 cut(s)	1233
BsrGI	TGTACA	1 cut(s)	1694
BsrI	ACTGG	4 cut(s)	309, 766, 1153, 1942
BssAI	RCCGGY	1 cut(s)	1233
BssECI	CCNNGG	4 cut(s)	487, 501, 849, 1954
BssMI	GATC	9 cut(s)	291, 352, 637, 1204, 1324, 1528, 1560, 1623, 1870
BssNI	GRCGYC	1 cut(s)	1412
BssT1I	CCWWGG	3 cut(s)	487, 501, 849
Bst2UI	CCWGG	1 cut(s)	1955
Bst4CI	ACNGT	5 cut(s)	401, 673, 876, 1062, 1471
Bst6I	CTCTTC	6 cut(s)	114, 197, 856, 1155, 1455, 1908
BstACI	GRCGYC	1 cut(s)	1412
BstAFI	CTTAAG	1 cut(s)	568
BstAUI	TGTACA	1 cut(s)	1694
BstBAI	YACGTR	2 cut(s)	1016, 1673
BstC8I	GCNNGC	5 cut(s)	185, 359, 556, 1235, 1416
BstDEI	CTNAG	6 cut(s)	188, 257, 375, 881, 1225, 1949
BstDSI	CCRYGG	1 cut(s)	501
BstF5I	GGATG	5 cut(s)	778, 1149, 1166, 1330, 1896
BstKTI	GATC	9 cut(s)	294, 355, 640, 1207, 1327, 1531, 1563, 1626, 1873
BstMAI	GTCTC	1 cut(s)	1644
BstMBI	GATC	9 cut(s)	291, 352, 637, 1204, 1324, 1528, 1560, 1623, 1870
BstMWI	GCNNNNNNNGC	4 cut(s)	560, 612, 786, 854
BstNI	CCWGG	1 cut(s)	1955
BstNSI	RCATGY	2 cut(s)	527, 558
BstPAI	GACNNNNGTC	1 cut(s)	489
BstSCI	CCNGG	1 cut(s)	1953
BstV1I	GCAGC	4 cut(s)	563, 1217, 1646, 1903
BstX2I	RGATCY	1 cut(s)	637
BstXI	CCANNNNNNTGG	1 cut(s)	773
BstYI	RGATCY	1 cut(s)	637
BsuRI	GGCC	3 cut(s)	985, 1300, 1959
BtgI	CCRYGG	1 cut(s)	501
BtgZI	GCGATG	1 cut(s)	1229
BtsCI	GGATG	5 cut(s)	778, 1149, 1166, 1330, 1896
BtsIMutI	CAGTG	3 cut(s)	480, 669, 872
Cac8I	GCNNGC	5 cut(s)	185, 359, 556, 1235, 1416
CaiI	CAGNNNCTG	2 cut(s)	374, 1060
Cfr10I	RCCGGY	1 cut(s)	1233
Cfr13I	GGNCC	4 cut(s)	166, 686, 983, 1957
CseI	GACGC	2 cut(s)	1420, 1626
Csp6I	GTAC	2 cut(s)	322, 1695
CspCI	CAANNNNNGTGG	2 cut(s)	1686, 1721
CviAII	CATG	9 cut(s)	41, 218, 502, 524, 555, 690, 702, 728, 1757
CviQI	GTAC	2 cut(s)	322, 1695
DdeI	CTNAG	6 cut(s)	188, 257, 375, 881, 1225, 1949
DpnI	GATC	9 cut(s)	293, 354, 639, 1206, 1326, 1530, 1562, 1625, 1872
DpnII	GATC	9 cut(s)	291, 352, 637, 1204, 1324, 1528, 1560, 1623, 1870
Eam1104I	CTCTTC	6 cut(s)	114, 197, 856, 1155, 1455, 1908
EarI	CTCTTC	6 cut(s)	114, 197, 856, 1155, 1455, 1908
Ecl136II	GAGCTC	1 cut(s)	563
Eco130I	CCWWGG	3 cut(s)	487, 501, 849
Eco24I	GRGCYC	2 cut(s)	565, 1587
Eco47I	GGWCC	2 cut(s)	166, 686
Eco53kI	GAGCTC	1 cut(s)	563
Eco57I	CTGAAG	1 cut(s)	114
Eco72I	CACGTG	1 cut(s)	1016
Eco88I	CYCGRG	1 cut(s)	64
EcoICRI	GAGCTC	1 cut(s)	563
EcoRII	CCWGG	1 cut(s)	1953
EcoT14I	CCWWGG	3 cut(s)	487, 501, 849
EcoT38I	GRGCYC	2 cut(s)	565, 1587
ErhI	CCWWGG	3 cut(s)	487, 501, 849
Esp3I	CGTCTC	1 cut(s)	1644
FaeI	CATG	9 cut(s)	44, 221, 505, 527, 558, 693, 705, 731, 1760
FalI	AAGNNNNNCTT	2 cut(s)	874, 906
FatI	CATG	9 cut(s)	40, 217, 501, 523, 554, 689, 701, 727, 1756
FauNDI	CATATG	1 cut(s)	1119
FbaI	TGATCA	1 cut(s)	1623
Fnu4HI	GCNGC	6 cut(s)	552, 986, 1147, 1231, 1635, 1892
FokI	GGATG	5 cut(s)	785, 1136, 1153, 1317, 1883
FriOI	GRGCYC	2 cut(s)	565, 1587
Fsp4HI	GCNGC	6 cut(s)	552, 986, 1147, 1231, 1635, 1892
FspBI	CTAG	7 cut(s)	212, 342, 510, 642, 858, 989, 1193
GluI	GCNGC	6 cut(s)	552, 986, 1147, 1231, 1635, 1892
GsaI	CCCAGC	2 cut(s)	741, 1890
GsuI	CTGGAG	1 cut(s)	231
HaeIII	GGCC	3 cut(s)	985, 1300, 1959
HapII	CCGG	2 cut(s)	419, 1234
HgaI	GACGC	2 cut(s)	1420, 1626
Hin1I	GRCGYC	1 cut(s)	1412
Hin1II	CATG	9 cut(s)	44, 221, 505, 527, 558, 693, 705, 731, 1760
HincII	GTYRAC	2 cut(s)	654, 1027
HindII	GTYRAC	2 cut(s)	654, 1027
HindIII	AAGCTT	3 cut(s)	462, 778, 1879
HinfI	GANTC	6 cut(s)	81, 662, 1079, 1088, 1163, 1499
HpaI	GTTAAC	1 cut(s)	1027
HpaII	CCGG	2 cut(s)	419, 1234
HphI	GGTGA	4 cut(s)	320, 517, 1420, 1744
Hpy166II	GTNNAC	3 cut(s)	654, 1027, 1855
Hpy188I	TCNGA	9 cut(s)	376, 546, 577, 667, 1056, 1102, 1255, 1784, 1844
Hpy188III	TCNNGA	5 cut(s)	66, 132, 248, 710, 1271
Hpy8I	GTNNAC	3 cut(s)	654, 1027, 1855
HpyAV	CCTTC	5 cut(s)	100, 118, 1182, 1255, 1290
HpyCH4III	ACNGT	5 cut(s)	401, 673, 876, 1062, 1471
HpyCH4IV	ACGT	3 cut(s)	824, 1015, 1672
HpyF10VI	GCNNNNNNNGC	4 cut(s)	560, 612, 786, 854
HpyF3I	CTNAG	6 cut(s)	188, 257, 375, 881, 1225, 1949
HpySE526I	ACGT	3 cut(s)	824, 1015, 1672
Hsp92I	GRCGYC	1 cut(s)	1412
Hsp92II	CATG	9 cut(s)	44, 221, 505, 527, 558, 693, 705, 731, 1760
KroI	GCCGGC	1 cut(s)	1233
KroNI	GCCGGC	1 cut(s)	1235
Ksp22I	TGATCA	1 cut(s)	1623
KspAI	GTTAAC	1 cut(s)	1027
Kzo9I	GATC	9 cut(s)	291, 352, 637, 1204, 1324, 1528, 1560, 1623, 1870
LmnI	GCTCC	3 cut(s)	250, 277, 568
Lsp1109I	GCAGC	4 cut(s)	563, 1217, 1646, 1903
LweI	GCATC	6 cut(s)	243, 859, 1158, 1252, 1339, 1695
MaeI	CTAG	7 cut(s)	212, 342, 510, 642, 858, 989, 1193
MaeII	ACGT	3 cut(s)	824, 1015, 1672
MaeIII	GTNAC	5 cut(s)	505, 659, 1408, 1514, 1763
MalI	GATC	9 cut(s)	293, 354, 639, 1206, 1326, 1530, 1562, 1625, 1872
MbiI	CCGCTC	1 cut(s)	1831
MboI	GATC	9 cut(s)	291, 352, 637, 1204, 1324, 1528, 1560, 1623, 1870
MflI	RGATCY	1 cut(s)	637
MhlI	GDGCHC	4 cut(s)	458, 565, 721, 1587
MlyI	GAGTC	4 cut(s)	90, 656, 1082, 1172
MmeI	TCCRAC	2 cut(s)	559, 750
MnlI	CCTC	8 cut(s)	23, 304, 320, 1195, 1608, 1702, 1728, 1753
MroNI	GCCGGC	1 cut(s)	1233
MseI	TTAA	6 cut(s)	569, 815, 1026, 1215, 1295, 1743
MslI	CAYNNNNRTG	2 cut(s)	1187, 1770
MspCI	CTTAAG	1 cut(s)	568
MspI	CCGG	2 cut(s)	419, 1234
MspR9I	CCNGG	1 cut(s)	1955
Mva1269I	GAATGC	2 cut(s)	141, 553
MvaI	CCWGG	1 cut(s)	1955
MwoI	GCNNNNNNNGC	4 cut(s)	560, 612, 786, 854
NaeI	GCCGGC	1 cut(s)	1235
NcoI	CCATGG	1 cut(s)	501
NdeI	CATATG	1 cut(s)	1119
NdeII	GATC	9 cut(s)	291, 352, 637, 1204, 1324, 1528, 1560, 1623, 1870
NgoMIV	GCCGGC	1 cut(s)	1233
NlaIII	CATG	9 cut(s)	44, 221, 505, 527, 558, 693, 705, 731, 1760
NlaIV	GGNNCC	2 cut(s)	168, 639
NmuCI	GTSAC	5 cut(s)	505, 659, 1408, 1514, 1763
NspI	RCATGY	2 cut(s)	527, 558
PaeI	GCATGC	1 cut(s)	558
PctI	GAATGC	2 cut(s)	141, 553
PdiI	GCCGGC	1 cut(s)	1235
PfeI	GAWTC	2 cut(s)	1079, 1499
PkrI	GCNGC	6 cut(s)	553, 987, 1148, 1232, 1636, 1893
PleI	GAGTC	4 cut(s)	89, 656, 1082, 1171
PmaCI	CACGTG	1 cut(s)	1016
PmlI	CACGTG	1 cut(s)	1016
PpsI	GAGTC	4 cut(s)	89, 656, 1082, 1171
Ppu21I	YACGTR	2 cut(s)	1016, 1673
PshAI	GACNNNNGTC	1 cut(s)	489
Psp124BI	GAGCTC	1 cut(s)	565
Psp6I	CCWGG	1 cut(s)	1953
PspCI	CACGTG	1 cut(s)	1016
PspFI	CCCAGC	2 cut(s)	737, 1886
PspGI	CCWGG	1 cut(s)	1953
PspN4I	GGNNCC	2 cut(s)	168, 639
PspPI	GGNCC	4 cut(s)	166, 686, 983, 1957
PstNI	CAGNNNCTG	2 cut(s)	374, 1060
PsuI	RGATCY	1 cut(s)	637
RsaI	GTAC	2 cut(s)	323, 1696
RsaNI	GTAC	2 cut(s)	322, 1695
RseI	CAYNNNNRTG	2 cut(s)	1187, 1770
SacI	GAGCTC	1 cut(s)	565
SaqAI	TTAA	6 cut(s)	569, 815, 1026, 1215, 1295, 1743
SatI	GCNGC	6 cut(s)	552, 986, 1147, 1231, 1635, 1892
Sau3AI	GATC	9 cut(s)	291, 352, 637, 1204, 1324, 1528, 1560, 1623, 1870
Sau96I	GGNCC	4 cut(s)	166, 686, 983, 1957
SchI	GAGTC	4 cut(s)	90, 656, 1082, 1172
ScrFI	CCNGG	1 cut(s)	1955
SduI	GDGCHC	4 cut(s)	458, 565, 721, 1587
SfaNI	GCATC	6 cut(s)	243, 859, 1158, 1252, 1339, 1695
SinI	GGWCC	2 cut(s)	166, 686
SmiMI	CAYNNNNRTG	2 cut(s)	1187, 1770
SmlI	CTYRAG	1 cut(s)	568
SmoI	CTYRAG	1 cut(s)	568
SpeI	ACTAGT	2 cut(s)	211, 509
SphI	GCATGC	1 cut(s)	558
SsiI	CCGC	4 cut(s)	986, 1147, 1595, 1831
SspI	AATATT	2 cut(s)	1346, 1727
SspMI	CTAG	7 cut(s)	212, 342, 510, 642, 858, 989, 1193
SstI	GAGCTC	1 cut(s)	565
StyD4I	CCNGG	1 cut(s)	1953
StyI	CCWWGG	3 cut(s)	487, 501, 849
TaaI	ACNGT	5 cut(s)	401, 673, 876, 1062, 1471
TaiI	ACGT	3 cut(s)	827, 1018, 1675
TaqI	TCGA	1 cut(s)	1091
TatI	WGTACW	2 cut(s)	321, 1694
TauI	GCSGC	2 cut(s)	988, 1149
TfiI	GAWTC	2 cut(s)	1079, 1499
Tru1I	TTAA	6 cut(s)	569, 815, 1026, 1215, 1295, 1743
Tru9I	TTAA	6 cut(s)	569, 815, 1026, 1215, 1295, 1743
TscAI	CASTG	3 cut(s)	487, 676, 879
TseFI	GTSAC	5 cut(s)	505, 659, 1408, 1514, 1763
TseI	GCWGC	4 cut(s)	551, 1230, 1634, 1891
Tsp45I	GTSAC	5 cut(s)	505, 659, 1408, 1514, 1763
TspDTI	ATGAA	9 cut(s)	57, 119, 744, 990, 1276, 1608, 1737, 1788, 1852
TspGWI	ACGGA	1 cut(s)	1168
TspRI	CASTG	3 cut(s)	487, 676, 879
Vha464I	CTTAAG	1 cut(s)	568
VpaK11BI	GGWCC	2 cut(s)	166, 686
XapI	RAATTY	6 cut(s)	46, 530, 903, 1310, 1482, 1982
XceI	RCATGY	2 cut(s)	527, 558
XspI	CTAG	7 cut(s)	212, 342, 510, 642, 858, 989, 1193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.