MD08G1207200.v1.1

von Willebrand factor type A domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0014171
Physical Location & Seq
Reverse (-)
26922288 .. 26925097
2810 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1207200.v1.1.491

Sequence Viewer

Length: 2247 bp
ATGGCAACTGGTTGGAGGCGAGCTTTTTGCACTACAATCCCTCGAGATCCAGCCGATGAATCCATACTCTCTGAAAAGATAAGCCCCAGCCCAAGTCCCACTCCCAGGAGCTGCACCAGGCTCGGCTTCTTCTCCGGCGGCAGCAACCCTTCTACCCCAAGATTGCAAACTCAGCAGCCCCAGCAGCAAACCCAGGTTGGCGACCATGAAAATCCCAGAAAACTTGAGTGCAAAACCACTACTCCAAAGAGTAGTAGAACGTCGTTTCTCTCGAGCTCCAACCCGACTTCTCCTCGATCCCCTCTCAAGCTCTCCCTCTTCCGTAACAGCTTCAAGTTTCGAAGTAGCTGCGGGATATGCCTGAACAGCGTCAAGACCGGCCAAGGCACCGCCATTTACACAGCGGAGTGCAGCCACGCCTTTCACTTCCCTTGCATAGCTGCCCATGTCCGCAGCCATGGCATCCTTGTCTGCCCCGTCTGCAACTCCACCTGGAAAGACGTCCCTCTCCTCGCCATCCACCAGAACCTCAACAACAACAACAACGCCCAGAACGACGTTGTCCGAAGTCAAACCATCCCAAAGCAGAAACCCAAATCCAAGACAGCCGAAGTCGAGAAGAAGATAATAATGGAGTCCACGCCACCACCCAGAGCCTCGTCTAAGCCATTGTACGACGATGACGAGTCTCTTCTCTCTCCAACGTCTCGGTTCATCCCCATCCCGGAAGCCGACGACGAGGAGGACGAAGATGACGCCGTCGCATACCCCGAGACCGACGACGTCCAAGAGTTCCAGGGCTTTTTCGTCAATCCAAACTCTTCATCTTCCGATGCTCAGATCAACGGCAGAGATTTTAGAACCAATAATAACGTTCAGGTGCGGATTTTGCCCGAATCCGCTTTGCTCTCTTCGGGTCGGGGCTCCGACACTTTTGCCGTGGCGTTGCGGGTGAAGGCTCCGCCTCCGTCGATTTTAAACCCGTCGCACCGTGCACCGATCGATTTGGTGACAGTGCTCGACGTCAGCGGAAGCATGACCGGCGCCAAACTCCAGATGCTGAAACGCGCCATGCGTTTGGTGATTTCGTCGCTCTGCTCCCACGACAGACTTTCGATTGTCGCTTTCTCGGCCACGACGAAACGGTTGTTGCCGTTGAGGAGAATGACGGCTTTCGGTCAACGTTTGGCTAGAAGAGTCGTTGACCGGCTTGCGTGCGGTCAGGGTTCGAGTGTGGGTGATGCCTTGAGGAAGGCGACAAAAGTGCTTGAAGATCGAAGGGAGAAGAATCCGGTTGCCAGTATCATGCTCTTATCGGACGGTCAGGATAGGCTGAAAAATTCGGCCAATCACCGTCAAGGTTCAGGCCACGTGTCGTCCACCCGTTTTGCTCACATTGAGATCCCGGTTCATGCTTTCGGGTTCGGCGAAACCGGCGGCTTTAACCAGGAGCCGGCTGAGGACGCGTTTGCCAAATGCGTTGGGGGATTGCTGAGTGTGGTCGTCCAGGACTTGAGAATTCAGCTGGGCTTCGATTCTGGCTCGGCTCCCGCAGAGATATCCGCCATCTATTCGTGCAATGGTGGGCCAGTAGTGCACGGCTCAGCTTCTGTTCGGCTCGGCGACTTGTACGCCGAGGAAGAGCGGGAGCTGCTGGTAGAGTTGCGGGTTCCACGCTCTCTAGGAGTTGCGGGATCCCGACACGTAATGTCTGTCCGGTGTCTCTACAAGGATCCTGCAACTCAAGAGATTGTGTATGGTAAAGAACAGGCACTTTTCGTGCCTCTCACGGATACCGTGAGATCGTCTTCGGGCCCGAAGATCGAACGGCTGAGAGGGCTGTTCATTACAACTCGCGCGGTAGCCGAGTCGCGGAGATTGGTTGAGCACAATGACTACTCTAGTGCGCATCATTTGCTTTCATCGGCTCGGGCTCTGCTCATGAAATCCGGCTCAGTATCGGCCGACGAGTACGTGCGTGGCCTGGAAGCCGAGCTCTCGGAGCTGCATTGGAGAAGGCAGCACAAGATCATGGAGGAGCAGCAGCAGATGATGATGATGATCCAACGGCGGAGAGGGGGCGTGGAAAGGGACGTGGCAGGGACCGCTGTAGTGGATGAAAACGGGGAGCCGCTTACACCGAGTTCGGCTTGGAGAGCGGCTGAGAAGCTGGCTAAGGTGGCGATCATGAAGAAGTCGCTGAATCGAGTGAGCGACTTGCACGGCTTTGAAAATGCTAGGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA_2 zf-RING_11 zf-RING_2

Protein Analysis

749

Amino Acids

82.07

Weight (kDa)

9.07

Isoelectric Point (pI)

51.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 116 - 162 2.3e-08 Ring finger domain
zf-RING_11 PF17123 117 - 146 5.9e-09 RING-like zinc finger
zf-C3HC4 PF00097 117 - 161 5.5e-06 Zinc finger, C3HC4 type (RING finger)
VWA PF00092 335 - 450 9.4e-13 von Willebrand factor type A domain
VWA_3 PF13768 335 - 478 5.8e-10 von Willebrand factor type A domain
VWA_2 PF13519 336 - 442 1.4e-18 von Willebrand factor type A domain
WAV3_C PF25243 606 - 677 1.6e-37 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014171)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49665
fragaria_vesca FvH4_5g33780 FvH4_5g33780
malus_domestica MD08G1207200.v1.1 MD15G1391600.v1.1
prunus_persica Prupe.1G540900_v2.0.a1
pyrus_communis pycom08g17950
rosa_chinensis RchiOBHm_Chr7g0233091
rosa_laevigata RLG00000001300
rosa_multiflora Rmu_sc0016344.1_g000006
rosa_roxburghii Rroxscaffold_3G00227690
rosa_rugosa Rorug07G0278100
rosa_samantha Rh7AG433300 Rh7BG406100 Rh7CG452700 Rh7DG421900
rosa_wichuraiana Rw7G035730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 3 cut(s) 504, 786, 1026
Acc16I TGCGCA 1 cut(s) 1908
AccB1I GGYRCC 2 cut(s) 386, 1043
AccBSI CCGCTC 2 cut(s) 1645, 2159
AccII CGCG 5 cut(s) 1068, 1466, 1857, 1859, 1873
AclI AACGTT 2 cut(s) 873, 1183
AclWI GGATC 8 cut(s) 41, 291, 1396, 1689, 1702, 1727, 1740, 2056
AcoI YGGCCR 4 cut(s) 379, 1131, 1344, 1962
AcsI RAATTY 2 cut(s) 1339, 1518
AcvI CACGTG 1 cut(s) 1372
AcyI GRCGYC 5 cut(s) 501, 756, 783, 1023, 1044
AfaI GTAC 3 cut(s) 674, 1631, 1973
AfiI CCNNNNNNNGG 4 cut(s) 105, 724, 1453, 1872
AflIII ACRYGT 3 cut(s) 1371, 1464, 1702
AgsI TTSAA 3 cut(s) 334, 1271, 2231
AjiI CACGTC 1 cut(s) 2095
AjnI CCWGG 8 cut(s) 104, 116, 192, 491, 795, 1446, 1506, 1983
Alw21I GWGCWC 6 cut(s) 278, 997, 1020, 1599, 1890, 1998
Alw26I GTCTC 4 cut(s) 693, 711, 767, 1727
Alw44I GTGCAC 2 cut(s) 993, 1595
AlwI GGATC 8 cut(s) 41, 291, 1396, 1689, 1702, 1727, 1740, 2056
AlwNI CAGNNNCTG 3 cut(s) 111, 1060, 1610
Ama87I CYCGRG 4 cut(s) 42, 271, 770, 1929
AoxI GGCC 8 cut(s) 379, 1131, 1344, 1366, 1586, 1813, 1962, 1981
ApaI GGGCCC 1 cut(s) 1817
ApaLI GTGCAC 2 cut(s) 993, 1595
ApoI RAATTY 2 cut(s) 1339, 1518
AspLEI GCGC 4 cut(s) 1046, 1070, 1859, 1909
AspS9I GGNCC 4 cut(s) 1586, 1813, 1814, 2103
AsuC2I CCSGG 2 cut(s) 725, 1406
AsuHPI GGTGA 5 cut(s) 964, 1021, 1093, 1250, 1343
AsuII TTCGAA 1 cut(s) 340
AvaI CYCGRG 4 cut(s) 42, 271, 770, 1929
AvaII GGWCC 1 cut(s) 2103
BaeGI GKGCMC 3 cut(s) 997, 1599, 1817
BamHI GGATCC 2 cut(s) 1694, 1732
BanI GGYRCC 2 cut(s) 386, 1043
BanII GRGCYC 5 cut(s) 278, 926, 1817, 1936, 1998
BbrPI CACGTG 1 cut(s) 1372
BbsI GAAGAC 1 cut(s) 1800
Bbv12I GWGCWC 6 cut(s) 278, 997, 1020, 1599, 1890, 1998
BbvCI CCTCAGC 1 cut(s) 1458
BccI CCATC 4 cut(s) 524, 584, 728, 1574
BceAI ACGGC 9 cut(s) 743, 862, 923, 1138, 1185, 1615, 1844, 2084, 2239
BciT130I CCWGG 8 cut(s) 106, 118, 194, 493, 797, 1448, 1508, 1985
BciVI GTATCC 1 cut(s) 1786
BcnI CCSGG 2 cut(s) 725, 1406
BcoDI GTCTC 4 cut(s) 693, 711, 767, 1727
BfaI CTAG 4 cut(s) 1191, 1682, 1902, 2238
BfmI CTRYAG 1 cut(s) 2109
BfoI RGCGCY 1 cut(s) 1047
BfuI GTATCC 1 cut(s) 1786
BlpI GCTNAGC 1 cut(s) 1603
Bme18I GGWCC 1 cut(s) 2103
BmeT110I CYCGRG 4 cut(s) 42, 271, 770, 1929
BmgBI CACGTC 1 cut(s) 2095
BmgT120I GGNCC 4 cut(s) 1586, 1813, 1814, 2103
BmsI GCATC 5 cut(s) 471, 823, 1047, 1231, 1918
BpiI GAAGAC 1 cut(s) 1800
BpmI CTGGAG 1 cut(s) 1037
Bpu10I CCTNAGC 2 cut(s) 1458, 2175
Bpu1102I GCTNAGC 1 cut(s) 1603
Bpu14I TTCGAA 1 cut(s) 340
BpuEI CTTGAG 5 cut(s) 245, 290, 1267, 1534, 1728
BpuMI CCSGG 2 cut(s) 725, 1406
Bsa29I ATCGAT 1 cut(s) 1002
BsaAI YACGTR 3 cut(s) 1372, 1705, 1975
BsaBI GATNNNNATC 1 cut(s) 2060
BsaHI GRCGYC 5 cut(s) 501, 756, 783, 1023, 1044
BsaI GGTCTC 1 cut(s) 767
BsaJI CCNNGG 7 cut(s) 104, 192, 382, 457, 796, 939, 1635
BsaWI WCCGGW 2 cut(s) 1291, 1716
BsaXI ACNNNNNCTCC 2 cut(s) 226, 256
Bsc4I CCNNNNNNNGG 4 cut(s) 105, 724, 1453, 1872
Bse118I RCCGGY 5 cut(s) 377, 1040, 1206, 1433, 1453
Bse1I ACTGG 3 cut(s) 13, 1299, 1589
Bse3DI GCAATG 1 cut(s) 1585
Bse8I GATNNNNATC 1 cut(s) 2060
BseBI CCWGG 8 cut(s) 106, 118, 194, 493, 797, 1448, 1508, 1985
BseCI ATCGAT 1 cut(s) 1002
BseDI CCNNGG 7 cut(s) 104, 192, 382, 457, 796, 939, 1635
BseGI GGATG 6 cut(s) 462, 516, 576, 714, 720, 2122
BseJI GATNNNNATC 1 cut(s) 2060
BseLI CCNNNNNNNGG 4 cut(s) 105, 724, 1453, 1872
BseMI GCAATG 1 cut(s) 1585
BseMII CTCAG 8 cut(s) 185, 851, 1449, 1484, 1617, 1823, 1968, 2154
BseNI ACTGG 3 cut(s) 13, 1299, 1589
BseRI GAGGAG 5 cut(s) 282, 500, 755, 1174, 2051
BseSI GKGCMC 3 cut(s) 997, 1599, 1817
BseX3I CGGCCG 1 cut(s) 1962
BseYI CCCAGC 3 cut(s) 86, 180, 1525
BsgI GTGCAG 2 cut(s) 97, 430
Bsh1236I CGCG 5 cut(s) 1068, 1466, 1857, 1859, 1873
Bsh1285I CGRYCG 2 cut(s) 1002, 1965
BshFI GGCC 8 cut(s) 381, 1133, 1346, 1368, 1588, 1815, 1964, 1983
BshNI GGYRCC 2 cut(s) 386, 1043
BshVI ATCGAT 1 cut(s) 1002
BsiEI CGRYCG 2 cut(s) 1002, 1965
BsiHKAI GWGCWC 6 cut(s) 278, 997, 1020, 1599, 1890, 1998
BsiHKCI CYCGRG 4 cut(s) 42, 271, 770, 1929
BslFI GGGAC 4 cut(s) 81, 488, 2105, 2116
BslI CCNNNNNNNGG 4 cut(s) 105, 724, 1453, 1872
BsmAI GTCTC 4 cut(s) 693, 711, 767, 1727
BsmBI CGTCTC 1 cut(s) 711
BsmFI GGGAC 4 cut(s) 81, 488, 2105, 2116
BsnI GGCC 8 cut(s) 381, 1133, 1346, 1368, 1588, 1815, 1964, 1983
Bso31I GGTCTC 1 cut(s) 767
BsoBI CYCGRG 4 cut(s) 42, 271, 770, 1929
Bsp119I TTCGAA 1 cut(s) 340
Bsp120I GGGCCC 1 cut(s) 1813
Bsp1286I GDGCHC 9 cut(s) 278, 926, 997, 1020, 1599, 1817, 1890, 1936, 1998
Bsp1720I GCTNAGC 1 cut(s) 1603
Bsp19I CCATGG 1 cut(s) 457
BspANI GGCC 8 cut(s) 381, 1133, 1346, 1368, 1588, 1815, 1964, 1983
BspCNI CTCAG 8 cut(s) 184, 850, 1450, 1485, 1616, 1824, 1967, 2155
BspDI ATCGAT 1 cut(s) 1002
BspFNI CGCG 5 cut(s) 1068, 1466, 1857, 1859, 1873
BspHI TCATGA 2 cut(s) 1941, 2187
BspPI GGATC 8 cut(s) 41, 291, 1396, 1689, 1702, 1727, 1740, 2056
BspQI GCTCTTC 1 cut(s) 1635
BspT104I TTCGAA 1 cut(s) 340
BspT107I GGYRCC 2 cut(s) 386, 1043
BspTNI GGTCTC 1 cut(s) 767
BsrBI CCGCTC 2 cut(s) 1645, 2159
BsrDI GCAATG 1 cut(s) 1585
BsrFI RCCGGY 5 cut(s) 377, 1040, 1206, 1433, 1453
BsrI ACTGG 3 cut(s) 13, 1299, 1589
BssAI RCCGGY 5 cut(s) 377, 1040, 1206, 1433, 1453
BssECI CCNNGG 7 cut(s) 104, 192, 382, 457, 796, 939, 1635
BssNI GRCGYC 5 cut(s) 501, 756, 783, 1023, 1044
BssT1I CCWWGG 2 cut(s) 382, 457
Bst2UI CCWGG 8 cut(s) 106, 118, 194, 493, 797, 1448, 1508, 1985
Bst4CI ACNGT 6 cut(s) 992, 1015, 1146, 1322, 1355, 1798
Bst6I CTCTTC 6 cut(s) 323, 696, 826, 916, 1189, 1635
BstACI GRCGYC 5 cut(s) 501, 756, 783, 1023, 1044
BstAPI GCANNNNNTGC 1 cut(s) 1915
BstBAI YACGTR 3 cut(s) 1372, 1705, 1975
BstBI TTCGAA 1 cut(s) 340
BstC8I GCNNGC 5 cut(s) 21, 1212, 1216, 1455, 2172
BstDSI CCRYGG 2 cut(s) 457, 939
BstF5I GGATG 6 cut(s) 462, 516, 576, 714, 720, 2122
BstFNI CGCG 5 cut(s) 1068, 1466, 1857, 1859, 1873
BstH2I RGCGCY 1 cut(s) 1047
BstHHI GCGC 4 cut(s) 1046, 1070, 1859, 1909
BstMAI GTCTC 4 cut(s) 693, 711, 767, 1727
BstMCI CGRYCG 2 cut(s) 1002, 1965
BstNI CCWGG 8 cut(s) 106, 118, 194, 493, 797, 1448, 1508, 1985
BstSFI CTRYAG 1 cut(s) 2109
BstSLI GKGCMC 3 cut(s) 997, 1599, 1817
BstUI CGCG 5 cut(s) 1068, 1466, 1857, 1859, 1873
BstV2I GAAGAC 1 cut(s) 1800
BstX2I RGATCY 4 cut(s) 46, 1401, 1694, 1732
BstXI CCANNNNNNTGG 1 cut(s) 1078
BstYI RGATCY 4 cut(s) 46, 1401, 1694, 1732
BstZI CGGCCG 1 cut(s) 1962
Bsu15I ATCGAT 1 cut(s) 1002
BsuI GTATCC 1 cut(s) 1786
BsuRI GGCC 8 cut(s) 381, 1133, 1346, 1368, 1588, 1815, 1964, 1983
BsuTUI ATCGAT 1 cut(s) 1002
BtgI CCRYGG 2 cut(s) 457, 939
BtrI CACGTC 1 cut(s) 2095
BtsCI GGATG 6 cut(s) 462, 516, 576, 714, 720, 2122
BtsIMutI CAGTG 1 cut(s) 1020
Cac8I GCNNGC 5 cut(s) 21, 1212, 1216, 1455, 2172
CaiI CAGNNNCTG 3 cut(s) 111, 1060, 1610
CciI TCATGA 2 cut(s) 1941, 2187
CfoI GCGC 4 cut(s) 1046, 1070, 1859, 1909
Cfr10I RCCGGY 5 cut(s) 377, 1040, 1206, 1433, 1453
Cfr13I GGNCC 4 cut(s) 1586, 1813, 1814, 2103
ClaI ATCGAT 1 cut(s) 1002
CseI GACGC 3 cut(s) 358, 764, 1472
Csp6I GTAC 3 cut(s) 673, 1630, 1972
CspCI CAANNNNNGTGG 2 cut(s) 1369, 1404
CviQI GTAC 3 cut(s) 673, 1630, 1972
DinI GGCGCC 1 cut(s) 1045
DraI TTTAAA 1 cut(s) 978
EaeI YGGCCR 4 cut(s) 379, 1131, 1344, 1962
EagI CGGCCG 1 cut(s) 1962
Eam1104I CTCTTC 6 cut(s) 323, 696, 826, 916, 1189, 1635
EarI CTCTTC 6 cut(s) 323, 696, 826, 916, 1189, 1635
EciI GGCGGA 3 cut(s) 951, 1552, 2086
Ecl136II GAGCTC 2 cut(s) 276, 1996
EclXI CGGCCG 1 cut(s) 1962
Eco130I CCWWGG 2 cut(s) 382, 457
Eco24I GRGCYC 5 cut(s) 278, 926, 1817, 1936, 1998
Eco31I GGTCTC 1 cut(s) 767
Eco32I GATATC 1 cut(s) 1560
Eco47I GGWCC 1 cut(s) 2103
Eco52I CGGCCG 1 cut(s) 1962
Eco53kI GAGCTC 2 cut(s) 276, 1996
Eco72I CACGTG 1 cut(s) 1372
Eco88I CYCGRG 4 cut(s) 42, 271, 770, 1929
EcoICRI GAGCTC 2 cut(s) 276, 1996
EcoRI GAATTC 1 cut(s) 1518
EcoRII CCWGG 8 cut(s) 104, 116, 192, 491, 795, 1446, 1506, 1983
EcoRV GATATC 1 cut(s) 1560
EcoT14I CCWWGG 2 cut(s) 382, 457
EcoT38I GRGCYC 5 cut(s) 278, 926, 1817, 1936, 1998
EgeI GGCGCC 1 cut(s) 1045
EheI GGCGCC 1 cut(s) 1045
ErhI CCWWGG 2 cut(s) 382, 457
Esp3I CGTCTC 1 cut(s) 711
FaqI GGGAC 4 cut(s) 81, 488, 2105, 2116
FauI CCCGC 6 cut(s) 344, 942, 1558, 1638, 1659, 1684
FokI GGATG 6 cut(s) 449, 503, 563, 701, 707, 2129
FriOI GRGCYC 5 cut(s) 278, 926, 1817, 1936, 1998
FspAI RTGCGCAY 1 cut(s) 1908
FspBI CTAG 4 cut(s) 1191, 1682, 1902, 2238
FspI TGCGCA 1 cut(s) 1908
GlaI GCGC 4 cut(s) 1045, 1069, 1858, 1908
GsaI CCCAGC 3 cut(s) 90, 184, 1529
GsuI CTGGAG 1 cut(s) 1037
HaeII RGCGCY 1 cut(s) 1047
HaeIII GGCC 8 cut(s) 381, 1133, 1346, 1368, 1588, 1815, 1964, 1983
HgaI GACGC 3 cut(s) 358, 764, 1472
HhaI GCGC 4 cut(s) 1046, 1070, 1859, 1909
Hin1I GRCGYC 5 cut(s) 501, 756, 783, 1023, 1044
Hin6I GCGC 4 cut(s) 1044, 1068, 1857, 1907
HinP1I GCGC 4 cut(s) 1044, 1068, 1857, 1907
HincII GTYRAC 2 cut(s) 1181, 1204
HindII GTYRAC 2 cut(s) 1181, 1204
HinfI GANTC 9 cut(s) 59, 635, 686, 896, 1197, 1288, 1535, 1868, 2203
HphI GGTGA 5 cut(s) 964, 1021, 1093, 1250, 1343
Hpy166II GTNNAC 6 cut(s) 639, 995, 1181, 1204, 1380, 1597
Hpy188I TCNGA 7 cut(s) 73, 566, 832, 840, 928, 1318, 2002
Hpy8I GTNNAC 6 cut(s) 639, 995, 1181, 1204, 1380, 1597
HpyAV CCTTC 5 cut(s) 159, 949, 1246, 1272, 2010
HpyCH4III ACNGT 6 cut(s) 992, 1015, 1146, 1322, 1355, 1798
Hsp92I GRCGYC 5 cut(s) 501, 756, 783, 1023, 1044
HspAI GCGC 4 cut(s) 1044, 1068, 1857, 1907
KasI GGCGCC 1 cut(s) 1043
KroI GCCGGC 1 cut(s) 1453
KroNI GCCGGC 1 cut(s) 1455
LguI GCTCTTC 1 cut(s) 1635
LweI GCATC 5 cut(s) 471, 823, 1047, 1231, 1918
MaeI CTAG 4 cut(s) 1191, 1682, 1902, 2238
MaeIII GTNAC 2 cut(s) 323, 1009
MbiI CCGCTC 2 cut(s) 1645, 2159
MflI RGATCY 4 cut(s) 46, 1401, 1694, 1732
MhlI GDGCHC 9 cut(s) 278, 926, 997, 1020, 1599, 1817, 1890, 1936, 1998
MluCI AATT 2 cut(s) 1339, 1518
MluI ACGCGT 1 cut(s) 1464
Mly113I GGCGCC 1 cut(s) 1044
MlyI GAGTC 4 cut(s) 644, 695, 1206, 1877
MmeI TCCRAC 4 cut(s) 303, 725, 951, 2089
MroNI GCCGGC 1 cut(s) 1453
MseI TTAA 2 cut(s) 977, 1443
MspA1I CMGCKG 4 cut(s) 404, 1029, 1525, 2108
MvaI CCWGG 8 cut(s) 106, 118, 194, 493, 797, 1448, 1508, 1985
MvnI CGCG 5 cut(s) 1068, 1466, 1857, 1859, 1873
NaeI GCCGGC 1 cut(s) 1455
NarI GGCGCC 1 cut(s) 1044
NciI CCSGG 2 cut(s) 725, 1406
NcoI CCATGG 1 cut(s) 457
NgoMIV GCCGGC 1 cut(s) 1453
NmeAIII GCCGAG 7 cut(s) 102, 1109, 1523, 1599, 1660, 1891, 2017
NmuCI GTSAC 1 cut(s) 1009
NsbI TGCGCA 1 cut(s) 1908
NspV TTCGAA 1 cut(s) 340
PaeR7I CTCGAG 2 cut(s) 42, 271
PagI TCATGA 2 cut(s) 1941, 2187
PciSI GCTCTTC 1 cut(s) 1635
PcsI WCGNNNNNNNCGW 8 cut(s) 269, 552, 681, 744, 768, 1072, 1136, 1425
PdiI GCCGGC 1 cut(s) 1455
PfeI GAWTC 5 cut(s) 59, 896, 1288, 1535, 2203
PflFI GACNNNGTC 3 cut(s) 560, 758, 782
PfoI TCCNGGA 2 cut(s) 723, 1506
Ple19I CGATCG 1 cut(s) 1002
PleI GAGTC 4 cut(s) 643, 694, 1205, 1876
PluTI GGCGCC 1 cut(s) 1047
PmaCI CACGTG 1 cut(s) 1372
PmlI CACGTG 1 cut(s) 1372
PpsI GAGTC 4 cut(s) 643, 694, 1205, 1876
Ppu21I YACGTR 3 cut(s) 1372, 1705, 1975
Psp124BI GAGCTC 2 cut(s) 278, 1998
Psp1406I AACGTT 2 cut(s) 873, 1183
Psp6I CCWGG 8 cut(s) 104, 116, 192, 491, 795, 1446, 1506, 1983
PspCI CACGTG 1 cut(s) 1372
PspFI CCCAGC 3 cut(s) 86, 180, 1525
PspGI CCWGG 8 cut(s) 104, 116, 192, 491, 795, 1446, 1506, 1983
PspOMI GGGCCC 1 cut(s) 1813
PspPI GGNCC 4 cut(s) 1586, 1813, 1814, 2103
PstNI CAGNNNCTG 3 cut(s) 111, 1060, 1610
PsuI RGATCY 4 cut(s) 46, 1401, 1694, 1732
PsyI GACNNNGTC 3 cut(s) 560, 758, 782
PvuI CGATCG 1 cut(s) 1002
PvuII CAGCTG 1 cut(s) 1525
RsaI GTAC 3 cut(s) 674, 1631, 1973
RsaNI GTAC 3 cut(s) 673, 1630, 1972
SacI GAGCTC 2 cut(s) 278, 1998
SapI GCTCTTC 1 cut(s) 1635
SaqAI TTAA 2 cut(s) 977, 1443
Sau96I GGNCC 4 cut(s) 1586, 1813, 1814, 2103
SchI GAGTC 4 cut(s) 644, 695, 1206, 1877
SduI GDGCHC 9 cut(s) 278, 926, 997, 1020, 1599, 1817, 1890, 1936, 1998
SfaNI GCATC 5 cut(s) 471, 823, 1047, 1231, 1918
SfcI CTRYAG 1 cut(s) 2109
SfoI GGCGCC 1 cut(s) 1045
Sfr274I CTCGAG 2 cut(s) 42, 271
SfuI TTCGAA 1 cut(s) 340
SinI GGWCC 1 cut(s) 2103
SlaI CTCGAG 2 cut(s) 42, 271
SmlI CTYRAG 7 cut(s) 42, 224, 271, 305, 1246, 1513, 1743
SmoI CTYRAG 7 cut(s) 42, 224, 271, 305, 1246, 1513, 1743
Sse9I AATT 2 cut(s) 1339, 1518
SspDI GGCGCC 1 cut(s) 1043
SspMI CTAG 4 cut(s) 1191, 1682, 1902, 2238
SstI GAGCTC 2 cut(s) 278, 1998
StyI CCWWGG 2 cut(s) 382, 457
TaaI ACNGT 6 cut(s) 992, 1015, 1146, 1322, 1355, 1798
TaqII GACCGA 2 cut(s) 791, 1166
TasI AATT 2 cut(s) 1339, 1518
TauI GCSGC 4 cut(s) 141, 1440, 2134, 2162
TfiI GAWTC 5 cut(s) 59, 896, 1288, 1535, 2203
Tru1I TTAA 2 cut(s) 977, 1443
Tru9I TTAA 2 cut(s) 977, 1443
TscAI CASTG 1 cut(s) 1020
TseFI GTSAC 1 cut(s) 1009
Tsp45I GTSAC 1 cut(s) 1009
TspGWI ACGGA 3 cut(s) 311, 957, 1805
TspRI CASTG 1 cut(s) 1020
Tth111I GACNNNGTC 3 cut(s) 560, 758, 782
VneI GTGCAC 2 cut(s) 993, 1595
VpaK11BI GGWCC 1 cut(s) 2103
XapI RAATTY 2 cut(s) 1339, 1518
XhoI CTCGAG 2 cut(s) 42, 271
XspI CTAG 4 cut(s) 1191, 1682, 1902, 2238
ZraI GACGTC 3 cut(s) 502, 784, 1024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.