Rh7BG406100

von Willebrand factor type A domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0014171
Physical Location & Seq
Reverse (-)
45471228 .. 45474524
3297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG406100.1

Sequence Viewer

Length: 2262 bp
ATGGGTACTGGTTGGAGACGAGCCTTTTGCACTACGATTCCTCGAGATCCATCAGAACACAGAGTTTCAGATCAAAAGCAGAGAAGCCCGAGTCCGAGCCCGAGCCCGAGCCCAAGAACCCGACTGAGCTTCTTCTCCTCCGGTGGTAGCAACCCGTCAACTCCGAAACTACGTTGTAAAACAGGGTCGGAAGCTCTACTTCAAAAATCGAATAGTATGCCTACGAATAATAGTGTTGCCGAGAGCCCGAGGGTCCTTGAAATCAAAACCAGCACTCCCAAATCGTCTAATCCGTCTTCTCCTCGATCCCCTCTCAAGCTCTCCCTCTTCAAGAACAGCTTCAAATTTCGAAGTAGCTGTGGAATTTGCTTGAATAGTGTGAAGACTGGGCAAGGCACAGCGATTTACACAGCAGAGTGTAGTCACGCCTTTCATTTTCCTTGCATAGCTTCTTATGTACGGAAGCATGGAAGCCTCATCTGCCCAGTTTGCAATTCCACATGGAAAGACGTTCCTTTACTGGCTATGCACAAGAGTCCCAGCCCTGATTCCCACCCGCCAGCCAACGACGCCGTTTCGGCACCTGTCACCCCCATGCCCAAAGTCGAAGAGAAAAAGGTGTTAGCTGAATCCGCCTCCCCCAGATACACGTTGAAGCCATACGACGACGACGAGCCACTCTTGTCTCCGTCCGTCGGAGGCCGGATTATCCCCATTCCCGAGGCGGAGGAGGAGGAGGAGGAGGACGCCGAGGATGACGTCGAAGAGTTCCAGGGCTTTTTCGTCAATCCCAACACTTCCTCTTCCGTCAAGTATTCTGATGATCCTCAGATAAATAATGGCAGAGATTTCAGGAACAATGTGCAGGTCAGGCTGTTACCGGAGGCTGCTTTGCTTTCCTCCGGCCGGGGTTTCGAGACCTACGCAGTGGCTTTGACAGTCAAGGCTCCGCCGGCGTCGGCTCGTCAGACTACCAGCGCGTCGATTCTGGACCCTTCCCACCGTGCCCCGATCGATTTGGTGACGGTGCTCGACGTCAGCGGCAGCATGACCGGTGGGAAGCTTCAGATGCTGAAACGCGCCATGCGTTTGGTCATTTCCTCGCTCGGCTCGGCTGATCGGCTCTCCATCGTGGTTTTCTCGGCTTCGCCAAAGAGACTGATGCCGTTGAAGAGAATGACGGCTCATGGCCAGCGCGCGGCTCGGCGCATCGTTGACCGGCTGGTCTGCGGTCAAGGTAGTAGCGTTGGTGAGGCCTTGATGAAGGCCACGAAGGTTCTGGAAGACCGGAGGGAGAGGAATCCAGTGGCGAGCATCATGCTCTTATCGGACGGTCAGGACGAGAGGGTCAACAACTCCGGCTCAACCAATCAACGTCAGGTCTCAAACGACGCGTCGTCCACCCGCTTCGCCCACATTGAGATTCCGGTTCATGCTTTCGGGTTCGGGCATAACGCCGGCTACTGCCAGGAGCCGGCTGAGGACGCCTTTGCCAAATGCGTCGGGGGTTTACTCAGCGTCGTGGTTCAGGACTTGAGAGTTCAGCTCGGCTTCTCATCCGGCTCGGCTCCGGCTGAGATAACCGCCATTTATTCCTGCAACGGACGGCCCACCGTGCACGGCTCGTCTTCGATTCGGCTCGGAGATTTGTACGCCGAGGAAGAGAGGGAGTTGCTCGTTGAGCTTCGTATCCCTACATCGGCTGCTGGGACCCACCATGTGATGTCAGTTCGGTGCTTATACAAAGACCCGGCGACCCAAGAAGTTGTCTACGGCAAGGAGCAGGGACTAGTAGTGCCCCTCACGCAGTCAGCCGTCCGATCAGTGTCCTCGAATCCGAAGATCCAACGGTTGAGAAGACTTTTCATGACTACGCGTGCTGTAGCGGAGTCACGGAGGCTGGTTGAGCACAATGACTTCCAAAGTGCACATCACTTGCTAGCATCGACTCGAGCTCTGCTCATGCAGTCCGGCTTGGCTTCGGCTGATGAGTACGTTCGGACATTGGAGGCTCAGCTGGCGGAGTTGCATTGGAAGAGGCAGAATCAGCTGGAGGAGCAGCAGCAGCATATGATGATAATGCAGCGGCGGAGAGTAAGCGAGAGAGAAATGGCGGCGTCGGCGGCTGTCGATGAAAACGGAGAGCCGCTGACGCCCTCTTCGGCATGGAGAGCCGCGGAGAAGCTGGCTAAGGTAGCTATGATGAAGAAGTCGTTGAATAGGGTCAGTGACTTGCACGGCTTTGAAAATGCTAGGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA_2 zf-RING_11 zf-RING_2

Protein Analysis

753

Amino Acids

82.38

Weight (kDa)

9.02

Isoelectric Point (pI)

54.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 119 - 165 6.6e-09 Ring finger domain
zf-RING_11 PF17123 120 - 149 5.9e-09 RING-like zinc finger
zf-C3HC4 PF00097 120 - 164 6.4e-06 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 122 - 165 5.7e-06 RING-H2 zinc finger domain
VWA PF00092 339 - 483 5.4e-15 von Willebrand factor type A domain
VWA_3 PF13768 339 - 484 1.8e-11 von Willebrand factor type A domain
VWA_2 PF13519 340 - 446 1.5e-20 von Willebrand factor type A domain
WAV3_C PF25243 612 - 686 1.4e-34 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014171)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49665
fragaria_vesca FvH4_5g33780 FvH4_5g33780
malus_domestica MD08G1207200.v1.1 MD15G1391600.v1.1
prunus_persica Prupe.1G540900_v2.0.a1
pyrus_communis pycom08g17950
rosa_chinensis RchiOBHm_Chr7g0233091
rosa_laevigata RLG00000001300
rosa_multiflora Rmu_sc0016344.1_g000006
rosa_roxburghii Rroxscaffold_3G00227690
rosa_rugosa Rorug07G0278100
rosa_samantha Rh7AG433300 Rh7BG406100 Rh7CG452700 Rh7DG421900
rosa_wichuraiana Rw7G035730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1223, 1346
AatII GACGTC 2 cut(s) 762, 1038
Acc36I ACCTGC 1 cut(s) 856
AccB1I GGYRCC 1 cut(s) 580
AccI GTMKAC 1 cut(s) 1770
AccII CGCG 7 cut(s) 980, 1080, 1197, 1199, 1394, 1876, 2177
AclWI GGATC 4 cut(s) 41, 300, 818, 1837
AcoI YGGCCR 2 cut(s) 904, 1189
AcsI RAATTY 2 cut(s) 344, 363
AcuI CTGAAG 1 cut(s) 1049
AcyI GRCGYC 8 cut(s) 570, 747, 759, 956, 1035, 1485, 2117, 2153
AdeI CACNNNGTG 1 cut(s) 1720
AfaI GTAC 4 cut(s) 7, 459, 1652, 1994
AfiI CCNNNNNNNGG 5 cut(s) 695, 906, 1198, 1474, 1699
AflIII ACRYGT 3 cut(s) 648, 1392, 1874
AgeI ACCGGT 1 cut(s) 1052
AgsI TTSAA 9 cut(s) 203, 260, 331, 343, 373, 655, 1171, 2218, 2246
AhdI GACNNNNNGTC 1 cut(s) 1396
AhlI ACTAGT 1 cut(s) 1789
AjnI CCWGG 2 cut(s) 771, 1467
Alw21I GWGCWC 5 cut(s) 1032, 1620, 1911, 1930, 1957
Alw26I GTCTC 5 cut(s) 10, 690, 911, 1150, 1387
Alw44I GTGCAC 2 cut(s) 1616, 1926
AlwI GGATC 4 cut(s) 41, 300, 818, 1837
AlwNI CAGNNNCTG 1 cut(s) 1072
Ama87I CYCGRG 7 cut(s) 42, 88, 100, 106, 247, 719, 1950
AoxI GGCC 6 cut(s) 700, 904, 1189, 1254, 1266, 1607
ApaLI GTGCAC 2 cut(s) 1616, 1926
ApeKI GCWGC 7 cut(s) 887, 1044, 1703, 2059, 2062, 2065, 2083
ApoI RAATTY 2 cut(s) 344, 363
ArsI GACNNNNNNTTYG 6 cut(s) 9, 41, 1379, 1411, 2143, 2175
AsiGI ACCGGT 1 cut(s) 1052
Asp700I GAANNNNTTC 1 cut(s) 338
AspLEI GCGC 5 cut(s) 980, 1082, 1197, 1199, 1209
AspS9I GGNCC 4 cut(s) 253, 991, 1608, 1710
AsuC2I CCSGG 2 cut(s) 908, 1751
AsuHPI GGTGA 3 cut(s) 580, 1033, 1262
AsuII TTCGAA 1 cut(s) 349
AsuNHI GCTAGC 1 cut(s) 1939
AvaI CYCGRG 7 cut(s) 42, 88, 100, 106, 247, 719, 1950
AvaII GGWCC 3 cut(s) 253, 991, 1710
BaeGI GKGCMC 4 cut(s) 1009, 1620, 1800, 1930
BalI TGGCCA 1 cut(s) 1191
BanI GGYRCC 1 cut(s) 580
BanII GRGCYC 5 cut(s) 101, 107, 113, 248, 1957
BbsI GAAGAC 5 cut(s) 288, 389, 1290, 1620, 1864
Bbv12I GWGCWC 5 cut(s) 1032, 1620, 1911, 1930, 1957
BbvCI CCTCAGC 1 cut(s) 1479
BbvI GCAGC 7 cut(s) 874, 1056, 1690, 2071, 2074, 2077, 2095
BccI CCATC 2 cut(s) 58, 1136
BceAI ACGGC 8 cut(s) 557, 1150, 1197, 1622, 1636, 1789, 1799, 2254
BcgI CGANNNNNNTGC 6 cut(s) 9, 43, 199, 233, 1300, 1334
BciT130I CCWGG 2 cut(s) 773, 1469
BciVI GTATCC 1 cut(s) 1700
BcnI CCSGG 2 cut(s) 908, 1751
BcoDI GTCTC 5 cut(s) 10, 690, 911, 1150, 1387
BcuI ACTAGT 1 cut(s) 1789
BfaI CTAG 3 cut(s) 1790, 1940, 2253
BfmI CTRYAG 1 cut(s) 1881
BfuAI ACCTGC 1 cut(s) 856
BfuI GTATCC 1 cut(s) 1700
BglI GCCNNNNNGGC 1 cut(s) 578
BlpI GCTNAGC 1 cut(s) 2013
Bme1390I CCNGG 4 cut(s) 773, 908, 1469, 1751
Bme18I GGWCC 3 cut(s) 253, 991, 1710
BmeRI GACNNNNNGTC 1 cut(s) 1396
BmeT110I CYCGRG 7 cut(s) 42, 88, 100, 106, 247, 719, 1950
BmgT120I GGNCC 4 cut(s) 253, 991, 1608, 1710
BmiI GGNNCC 8 cut(s) 254, 582, 948, 993, 1473, 1569, 1711, 1712
BmrFI CCNGG 4 cut(s) 773, 908, 1469, 1751
BmrI ACTGGG 2 cut(s) 396, 479
BmsI GCATC 5 cut(s) 1059, 1152, 1218, 1323, 1952
BmtI GCTAGC 1 cut(s) 1943
BmuI ACTGGG 2 cut(s) 396, 479
BpiI GAAGAC 5 cut(s) 288, 389, 1290, 1620, 1864
BplI GAGNNNNNCTC 4 cut(s) 1530, 1562, 1944, 1976
BpmI CTGGAG 1 cut(s) 2072
Bpu10I CCTNAGC 2 cut(s) 1479, 2190
Bpu1102I GCTNAGC 1 cut(s) 2013
Bpu14I TTCGAA 1 cut(s) 349
BpuEI CTTGAG 2 cut(s) 299, 1555
BpuMI CCSGG 2 cut(s) 908, 1751
Bsa29I ATCGAT 1 cut(s) 1014
BsaHI GRCGYC 8 cut(s) 570, 747, 759, 956, 1035, 1485, 2117, 2153
BsaI GGTCTC 2 cut(s) 911, 1387
BsaJI CCNNGG 7 cut(s) 248, 720, 750, 772, 907, 1656, 2175
BsaWI WCCGGW 5 cut(s) 140, 880, 1052, 1287, 1426
BsaXI ACNNNNNCTCC 2 cut(s) 259, 289
Bsc4I CCNNNNNNNGG 5 cut(s) 695, 906, 1198, 1474, 1699
Bse118I RCCGGY 5 cut(s) 952, 1052, 1218, 1457, 1474
Bse1I ACTGG 5 cut(s) 13, 391, 485, 525, 1304
BseBI CCWGG 2 cut(s) 773, 1469
BseCI ATCGAT 1 cut(s) 1014
BseDI CCNNGG 7 cut(s) 248, 720, 750, 772, 907, 1656, 2175
BseGI GGATG 2 cut(s) 760, 1556
BseLI CCNNNNNNNGG 5 cut(s) 695, 906, 1198, 1474, 1699
BseMII CTCAG 6 cut(s) 116, 842, 1470, 1528, 1566, 2027
BseNI ACTGG 5 cut(s) 13, 391, 485, 525, 1304
BsePI GCGCGC 1 cut(s) 1195
BseRI GAGGAG 8 cut(s) 127, 291, 743, 746, 749, 752, 755, 2069
BseSI GKGCMC 4 cut(s) 1009, 1620, 1800, 1930
BseX3I CGGCCG 1 cut(s) 904
BseXI GCAGC 7 cut(s) 874, 1056, 1690, 2071, 2074, 2077, 2095
BseYI CCCAGC 2 cut(s) 539, 1706
BsgI GTGCAG 1 cut(s) 884
Bsh1236I CGCG 7 cut(s) 980, 1080, 1197, 1199, 1394, 1876, 2177
Bsh1285I CGRYCG 2 cut(s) 907, 1014
BshFI GGCC 6 cut(s) 702, 906, 1191, 1256, 1268, 1609
BshNI GGYRCC 1 cut(s) 580
BshTI ACCGGT 1 cut(s) 1052
BshVI ATCGAT 1 cut(s) 1014
BsiEI CGRYCG 2 cut(s) 907, 1014
BsiHKAI GWGCWC 5 cut(s) 1032, 1620, 1911, 1930, 1957
BsiHKCI CYCGRG 7 cut(s) 42, 88, 100, 106, 247, 719, 1950
BslFI GGGAC 3 cut(s) 522, 1723, 1800
BslI CCNNNNNNNGG 5 cut(s) 695, 906, 1198, 1474, 1699
BsmAI GTCTC 5 cut(s) 10, 690, 911, 1150, 1387
BsmBI CGTCTC 1 cut(s) 10
BsmFI GGGAC 3 cut(s) 522, 1723, 1800
BsnI GGCC 6 cut(s) 702, 906, 1191, 1256, 1268, 1609
Bso31I GGTCTC 2 cut(s) 911, 1387
BsoBI CYCGRG 7 cut(s) 42, 88, 100, 106, 247, 719, 1950
Bsp119I TTCGAA 1 cut(s) 349
Bsp143I GATC 8 cut(s) 46, 70, 305, 823, 1011, 1117, 1820, 1842
Bsp1720I GCTNAGC 1 cut(s) 2013
BspANI GGCC 6 cut(s) 702, 906, 1191, 1256, 1268, 1609
BspCNI CTCAG 6 cut(s) 117, 841, 1471, 1527, 1567, 2026
BspDI ATCGAT 1 cut(s) 1014
BspFNI CGCG 7 cut(s) 980, 1080, 1197, 1199, 1394, 1876, 2177
BspHI TCATGA 1 cut(s) 1866
BspLI GGNNCC 8 cut(s) 254, 582, 948, 993, 1473, 1569, 1711, 1712
BspMI ACCTGC 1 cut(s) 856
BspOI GCTAGC 1 cut(s) 1943
BspPI GGATC 4 cut(s) 41, 300, 818, 1837
BspT104I TTCGAA 1 cut(s) 349
BspT107I GGYRCC 1 cut(s) 580
BspTNI GGTCTC 2 cut(s) 911, 1387
BsrFI RCCGGY 5 cut(s) 952, 1052, 1218, 1457, 1474
BsrI ACTGG 5 cut(s) 13, 391, 485, 525, 1304
BssAI RCCGGY 5 cut(s) 952, 1052, 1218, 1457, 1474
BssECI CCNNGG 7 cut(s) 248, 720, 750, 772, 907, 1656, 2175
BssHII GCGCGC 1 cut(s) 1195
BssMI GATC 8 cut(s) 46, 70, 305, 823, 1011, 1117, 1820, 1842
BssNI GRCGYC 8 cut(s) 570, 747, 759, 956, 1035, 1485, 2117, 2153
Bst2UI CCWGG 2 cut(s) 773, 1469
Bst4CI ACNGT 6 cut(s) 940, 1004, 1027, 1334, 1615, 1851
Bst6I CTCTTC 8 cut(s) 332, 603, 759, 808, 1166, 1656, 2030, 2164
BstACI GRCGYC 8 cut(s) 570, 747, 759, 956, 1035, 1485, 2117, 2153
BstBI TTCGAA 1 cut(s) 349
BstDEI CTNAG 7 cut(s) 125, 828, 1479, 1514, 1575, 2013, 2190
BstDSI CCRYGG 1 cut(s) 2175
BstF5I GGATG 2 cut(s) 760, 1556
BstFNI CGCG 7 cut(s) 980, 1080, 1197, 1199, 1394, 1876, 2177
BstHHI GCGC 5 cut(s) 980, 1082, 1197, 1199, 1209
BstKTI GATC 8 cut(s) 49, 73, 308, 826, 1014, 1120, 1823, 1845
BstMAI GTCTC 5 cut(s) 10, 690, 911, 1150, 1387
BstMBI GATC 8 cut(s) 46, 70, 305, 823, 1011, 1117, 1820, 1842
BstMCI CGRYCG 2 cut(s) 907, 1014
BstNI CCWGG 2 cut(s) 773, 1469
BstSCI CCNGG 4 cut(s) 771, 906, 1467, 1749
BstSFI CTRYAG 1 cut(s) 1881
BstSLI GKGCMC 4 cut(s) 1009, 1620, 1800, 1930
BstUI CGCG 7 cut(s) 980, 1080, 1197, 1199, 1394, 1876, 2177
BstV1I GCAGC 7 cut(s) 874, 1056, 1690, 2071, 2074, 2077, 2095
BstV2I GAAGAC 5 cut(s) 288, 389, 1290, 1620, 1864
BstX2I RGATCY 2 cut(s) 46, 1842
BstXI CCANNNNNNTGG 1 cut(s) 1090
BstYI RGATCY 2 cut(s) 46, 1842
BstZI CGGCCG 1 cut(s) 904
Bsu15I ATCGAT 1 cut(s) 1014
BsuI GTATCC 1 cut(s) 1700
BsuRI GGCC 6 cut(s) 702, 906, 1191, 1256, 1268, 1609
BsuTUI ATCGAT 1 cut(s) 1014
BtgI CCRYGG 1 cut(s) 2175
BtsCI GGATG 2 cut(s) 760, 1556
BtsI GCAGTG 1 cut(s) 933
BtsIMutI CAGTG 4 cut(s) 933, 1311, 1830, 2233
BveI ACCTGC 1 cut(s) 856
CaiI CAGNNNCTG 1 cut(s) 1072
CciI TCATGA 1 cut(s) 1866
CfoI GCGC 5 cut(s) 980, 1082, 1197, 1199, 1209
Cfr10I RCCGGY 5 cut(s) 952, 1052, 1218, 1457, 1474
Cfr13I GGNCC 4 cut(s) 253, 991, 1608, 1710
Cfr42I CCGCGG 1 cut(s) 2178
ClaI ATCGAT 1 cut(s) 1014
Csp6I GTAC 4 cut(s) 6, 458, 1651, 1993
CspAI ACCGGT 1 cut(s) 1052
CviQI GTAC 4 cut(s) 6, 458, 1651, 1993
DdeI CTNAG 7 cut(s) 125, 828, 1479, 1514, 1575, 2013, 2190
DpnI GATC 8 cut(s) 48, 72, 307, 825, 1013, 1119, 1822, 1844
DpnII GATC 8 cut(s) 46, 70, 305, 823, 1011, 1117, 1820, 1842
DraIII CACNNNGTG 1 cut(s) 1720
DrdI GACNNNNNNGTC 2 cut(s) 1223, 1346
DriI GACNNNNNGTC 1 cut(s) 1396
DseDI GACNNNNNNGTC 2 cut(s) 1223, 1346
EaeI YGGCCR 2 cut(s) 904, 1189
EagI CGGCCG 1 cut(s) 904
Eam1104I CTCTTC 8 cut(s) 332, 603, 759, 808, 1166, 1656, 2030, 2164
Eam1105I GACNNNNNGTC 1 cut(s) 1396
EarI CTCTTC 8 cut(s) 332, 603, 759, 808, 1166, 1656, 2030, 2164
EciI GGCGGA 5 cut(s) 622, 740, 939, 2036, 2104
Ecl136II GAGCTC 1 cut(s) 1955
EclXI CGGCCG 1 cut(s) 904
Eco147I AGGCCT 1 cut(s) 1256
Eco24I GRGCYC 5 cut(s) 101, 107, 113, 248, 1957
Eco31I GGTCTC 2 cut(s) 911, 1387
Eco47I GGWCC 3 cut(s) 253, 991, 1710
Eco52I CGGCCG 1 cut(s) 904
Eco53kI GAGCTC 1 cut(s) 1955
Eco57I CTGAAG 1 cut(s) 1049
Eco88I CYCGRG 7 cut(s) 42, 88, 100, 106, 247, 719, 1950
EcoICRI GAGCTC 1 cut(s) 1955
EcoO109I RGGNCCY 2 cut(s) 253, 1710
EcoRII CCWGG 2 cut(s) 771, 1467
EcoT38I GRGCYC 5 cut(s) 101, 107, 113, 248, 1957
Esp3I CGTCTC 1 cut(s) 10
FalI AAGNNNNNCTT 4 cut(s) 183, 215, 323, 355
FaqI GGGAC 3 cut(s) 522, 1723, 1800
FauI CCCGC 2 cut(s) 564, 1412
FauNDI CATATG 1 cut(s) 2070
FblI GTMKAC 1 cut(s) 1770
FokI GGATG 2 cut(s) 767, 1543
FriOI GRGCYC 5 cut(s) 101, 107, 113, 248, 1957
FspBI CTAG 3 cut(s) 1790, 1940, 2253
GlaI GCGC 5 cut(s) 979, 1081, 1196, 1198, 1208
GsaI CCCAGC 2 cut(s) 543, 1710
GsuI CTGGAG 1 cut(s) 2072
HaeIII GGCC 6 cut(s) 702, 906, 1191, 1256, 1268, 1609
HhaI GCGC 5 cut(s) 980, 1082, 1197, 1199, 1209
Hin1I GRCGYC 8 cut(s) 570, 747, 759, 956, 1035, 1485, 2117, 2153
Hin6I GCGC 5 cut(s) 978, 1080, 1195, 1197, 1207
HinP1I GCGC 5 cut(s) 978, 1080, 1195, 1197, 1207
HincII GTYRAC 3 cut(s) 159, 1216, 1351
HindII GTYRAC 3 cut(s) 159, 1216, 1351
HindIII AAGCTT 1 cut(s) 1061
HphI GGTGA 3 cut(s) 580, 1033, 1262
Hpy166II GTNNAC 8 cut(s) 159, 1216, 1351, 1401, 1511, 1618, 1771, 1928
Hpy8I GTNNAC 8 cut(s) 159, 1216, 1351, 1401, 1511, 1618, 1771, 1928
HpyAV CCTTC 3 cut(s) 1005, 1258, 1267
HpyCH4III ACNGT 6 cut(s) 940, 1004, 1027, 1334, 1615, 1851
HpyCH4IV ACGT 7 cut(s) 172, 510, 650, 759, 1035, 1375, 1995
HpyF3I CTNAG 7 cut(s) 125, 828, 1479, 1514, 1575, 2013, 2190
HpySE526I ACGT 7 cut(s) 172, 510, 650, 759, 1035, 1375, 1995
Hsp92I GRCGYC 8 cut(s) 570, 747, 759, 956, 1035, 1485, 2117, 2153
HspAI GCGC 5 cut(s) 978, 1080, 1195, 1197, 1207
KflI GGGWCCC 1 cut(s) 1710
KroI GCCGGC 3 cut(s) 952, 1457, 1474
KroNI GCCGGC 3 cut(s) 954, 1459, 1476
KspI CCGCGG 1 cut(s) 2178
Kzo9I GATC 8 cut(s) 46, 70, 305, 823, 1011, 1117, 1820, 1842
LmnI GCTCC 5 cut(s) 952, 1471, 1573, 1780, 2056
Lsp1109I GCAGC 7 cut(s) 874, 1056, 1690, 2071, 2074, 2077, 2095
LweI GCATC 5 cut(s) 1059, 1152, 1218, 1323, 1952
MaeI CTAG 3 cut(s) 1790, 1940, 2253
MaeII ACGT 7 cut(s) 172, 510, 650, 759, 1035, 1375, 1995
MaeIII GTNAC 6 cut(s) 422, 586, 876, 1021, 1890, 2228
MalI GATC 8 cut(s) 48, 72, 307, 825, 1013, 1119, 1822, 1844
MboI GATC 8 cut(s) 46, 70, 305, 823, 1011, 1117, 1820, 1842
MflI RGATCY 2 cut(s) 46, 1842
MlsI TGGCCA 1 cut(s) 1191
MluCI AATT 3 cut(s) 344, 363, 493
MluI ACGCGT 2 cut(s) 1392, 1874
MluNI TGGCCA 1 cut(s) 1191
MlyI GAGTC 4 cut(s) 100, 544, 1898, 1942
MmeI TCCRAC 3 cut(s) 168, 676, 1870
Mox20I TGGCCA 1 cut(s) 1191
MreI CGCCGGCG 1 cut(s) 952
MroNI GCCGGC 3 cut(s) 952, 1457, 1474
MroXI GAANNNNTTC 1 cut(s) 338
MscI TGGCCA 1 cut(s) 1191
MseI TTAA 1 cut(s) 2260
MslI CAYNNNNRTG 1 cut(s) 593
Msp20I TGGCCA 1 cut(s) 1191
MspA1I CMGCKG 6 cut(s) 1041, 2017, 2050, 2086, 2149, 2177
MspR9I CCNGG 4 cut(s) 773, 908, 1469, 1751
MvaI CCWGG 2 cut(s) 773, 1469
MvnI CGCG 7 cut(s) 980, 1080, 1197, 1199, 1394, 1876, 2177
NaeI GCCGGC 3 cut(s) 954, 1459, 1476
NciI CCSGG 2 cut(s) 908, 1751
NdeI CATATG 1 cut(s) 2070
NdeII GATC 8 cut(s) 46, 70, 305, 823, 1011, 1117, 1820, 1842
NgoMIV GCCGGC 3 cut(s) 952, 1457, 1474
NheI GCTAGC 1 cut(s) 1939
NlaIV GGNNCC 8 cut(s) 254, 582, 948, 993, 1473, 1569, 1711, 1712
NmeAIII GCCGAG 9 cut(s) 265, 775, 1086, 1091, 1121, 1183, 1527, 1544, 1681
NmuCI GTSAC 5 cut(s) 422, 586, 1021, 1890, 2228
NspV TTCGAA 1 cut(s) 349
PaeR7I CTCGAG 2 cut(s) 42, 1950
PagI TCATGA 1 cut(s) 1866
PauI GCGCGC 1 cut(s) 1195
PceI AGGCCT 1 cut(s) 1256
PcsI WCGNNNNNNNCGW 4 cut(s) 290, 669, 1084, 1338
PdiI GCCGGC 3 cut(s) 954, 1459, 1476
PdmI GAANNNNTTC 1 cut(s) 338
PfeI GAWTC 9 cut(s) 37, 548, 629, 985, 1300, 1423, 1633, 1834, 2044
PinAI ACCGGT 1 cut(s) 1052
Ple19I CGATCG 1 cut(s) 1014
PleI GAGTC 4 cut(s) 99, 543, 1897, 1942
PpsI GAGTC 4 cut(s) 99, 543, 1897, 1942
PpuMI RGGWCCY 2 cut(s) 253, 1710
Psp124BI GAGCTC 1 cut(s) 1957
Psp5II RGGWCCY 2 cut(s) 253, 1710
Psp6I CCWGG 2 cut(s) 771, 1467
PspFI CCCAGC 2 cut(s) 539, 1706
PspGI CCWGG 2 cut(s) 771, 1467
PspN4I GGNNCC 8 cut(s) 254, 582, 948, 993, 1473, 1569, 1711, 1712
PspPI GGNCC 4 cut(s) 253, 991, 1608, 1710
PspPPI RGGWCCY 2 cut(s) 253, 1710
PspXI VCTCGAGB 1 cut(s) 1950
PstNI CAGNNNCTG 1 cut(s) 1072
PsuI RGATCY 2 cut(s) 46, 1842
PteI GCGCGC 1 cut(s) 1195
PvuI CGATCG 1 cut(s) 1014
PvuII CAGCTG 2 cut(s) 2017, 2050
RsaI GTAC 4 cut(s) 7, 459, 1652, 1994
RsaNI GTAC 4 cut(s) 6, 458, 1651, 1993
RseI CAYNNNNRTG 1 cut(s) 593
SacI GAGCTC 1 cut(s) 1957
SacII CCGCGG 1 cut(s) 2178
SaqAI TTAA 1 cut(s) 2260
Sau3AI GATC 8 cut(s) 46, 70, 305, 823, 1011, 1117, 1820, 1842
Sau96I GGNCC 4 cut(s) 253, 991, 1608, 1710
SchI GAGTC 4 cut(s) 100, 544, 1898, 1942
ScrFI CCNGG 4 cut(s) 773, 908, 1469, 1751
SfaNI GCATC 5 cut(s) 1059, 1152, 1218, 1323, 1952
SfcI CTRYAG 1 cut(s) 1881
Sfr274I CTCGAG 2 cut(s) 42, 1950
Sfr303I CCGCGG 1 cut(s) 2178
SfuI TTCGAA 1 cut(s) 349
SgrAI CRCCGGYG 1 cut(s) 952
SgrBI CCGCGG 1 cut(s) 2178
SinI GGWCC 3 cut(s) 253, 991, 1710
SlaI CTCGAG 2 cut(s) 42, 1950
SmiMI CAYNNNNRTG 1 cut(s) 593
SmlI CTYRAG 4 cut(s) 42, 314, 1534, 1950
SmoI CTYRAG 4 cut(s) 42, 314, 1534, 1950
SpeI ACTAGT 1 cut(s) 1789
Sse9I AATT 3 cut(s) 344, 363, 493
SseBI AGGCCT 1 cut(s) 1256
SspMI CTAG 3 cut(s) 1790, 1940, 2253
SstI GAGCTC 1 cut(s) 1957
StuI AGGCCT 1 cut(s) 1256
StyD4I CCNGG 4 cut(s) 771, 906, 1467, 1749
TaaI ACNGT 6 cut(s) 940, 1004, 1027, 1334, 1615, 1851
TaiI ACGT 7 cut(s) 175, 513, 653, 762, 1038, 1378, 1998
TasI AATT 3 cut(s) 344, 363, 493
TauI GCSGC 7 cut(s) 1044, 1202, 2089, 2117, 2126, 2149, 2177
TfiI GAWTC 9 cut(s) 37, 548, 629, 985, 1300, 1423, 1633, 1834, 2044
Tru1I TTAA 1 cut(s) 2260
Tru9I TTAA 1 cut(s) 2260
TscAI CASTG 4 cut(s) 933, 1311, 1830, 2233
TseFI GTSAC 5 cut(s) 422, 586, 1021, 1890, 2228
TseI GCWGC 7 cut(s) 887, 1044, 1703, 2059, 2062, 2065, 2083
Tsp45I GTSAC 5 cut(s) 422, 586, 1021, 1890, 2228
TspDTI ATGAA 6 cut(s) 422, 1277, 1421, 1855, 2148, 2219
TspGWI ACGGA 8 cut(s) 282, 475, 678, 682, 796, 1617, 1909, 2154
TspRI CASTG 4 cut(s) 933, 1311, 1830, 2233
VneI GTGCAC 2 cut(s) 1616, 1926
VpaK11BI GGWCC 3 cut(s) 253, 991, 1710
XapI RAATTY 2 cut(s) 344, 363
XcmI CCANNNNNNNNNTGG 1 cut(s) 1276
XhoI CTCGAG 2 cut(s) 42, 1950
XmiI GTMKAC 1 cut(s) 1770
XmnI GAANNNNTTC 1 cut(s) 338
XspI CTAG 3 cut(s) 1790, 1940, 2253
ZraI GACGTC 2 cut(s) 760, 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.