MD15G1391600.v1.1

von Willebrand factor type A domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0014171
Physical Location & Seq
Reverse (-)
48740295 .. 48743196
2902 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1391600.v1.1.491

Sequence Viewer

Length: 2238 bp
ATGGGAACTGGTTGGAGGCGAGCTTTCTGCACTACAATCCCTCGAGATCCAGCCGAAGAATCCACACTCTCTGAAAAGATAAGTCCCAGCCCAAGTACCACTCCCAGAAGCTGTACCAGGCTCGGTTTCTTCTCCAGTGGCAGCTATCCTACCACCTCGAGATTGCAAACCCAGCAGCAAACCCAGGTTGGCGACCATGAAAATCCCAGAAAACTTGAGTGCAAAACCAGTACTCCAAACCGTAGTAGAACGTCGTTTCTCTCGAGCTCCAACCCAACTTCTCCTCGATCCCCTTTCAAGCTCTCCCTCTTCCGAAACAGCTTCAAATTTCGGAGCAGCTGCAGGATATGCTTGAACAGCGTCAAAACCGGCCAAAGCACCGCCATTTACACGGCAGAGTGCAGCCACTCCTTTCACTTCCCTTGCATAGCTATCCATGTCCGCAGCCATGGCAAACTCGTCTGCCCCGTCTGCAACTCCACCTGGAAAGACGTCCCTCTCCTCGCCATCCACCAAAACCTCAACAACAACAACGCCGCCCAGAACGACGTCATCCGAAGCCAAACCACCCCAAAGCAGAAACCCAAATCCAAGCCCGCCGAGGCCGACAAAAAGATAGTAATGGAGTCCACATCATCACCGAGAGCCTCGTCGAAGCCATTGTACGACGACGACGAGTCTCTTCTCTCTCCGACGTCTCGGATCATCCCCATCCCAGAAGCCGACGACGAGGAGGCAGAAGACGAGGCCGTCGCAGACCCCGAGACCGACGACGTCCAAGAGTTCCAGGGTTTTTTCGTCAATCCCAACTCTTCATCTTCCGATGCCCAGACCAACTGCAGAGATTTTAAAACCAATAATAAAGTTCAGGTGCGGATTTTGCCCGAATCCGCTTTGCTCTTTTCGGGTCGGGGCTCCGATACTTATGTCGTGGCGTTGCGGGTCAAGGCACCACCGCCGCCGATTTTAAACCCTTCGCATCGCGCGCCGATCGATTTGGTAACGGTGCTCGACGTCAGCGGAAGCATGACCGGCGCGAAGCTCCAGATGTTGAAACGCGCCATGCGTTTGGTCATTTCATCGCTCGGCTCCAACGACCGGCTTTCGATTGTCGCTTTTTCCGCTTCGACGAAACGGTTGTTGTCGTTGAAGAGAATGACGGCCCATGGTCAACGTTTGGCTAGAAGGGTCGTTGACCGGCTTGCATGCGGCCAAGGTTCGAGTGTGGGTGACGCCTTGAGGAAGGCGACTAAGGTGCTTGATGATCGGAGGGAGAAGAATCCAGTGGCCAGTGTCATGCTCTTATCCGACGGTCATGATGAGAGGGTGAAAACATCGGGCAATCGTCGTCAAAGTTCAAGCCAAGTATCGTCCACCCGGTTCGCTCACATTGAAATCCCAGTTCATGATTTCGGGTTCCGCGAAACCGGCGGCGTTGGCCAGGAGCCGGCTGAGGACGCCTTTGCCAAATGCGTTGGTGGAATAGTGAGTGTGGTGGTGCAGGACTTGAGAATTCAGCTGGGCTTTGATTCCGGCTCGGCTCCCGCGGAGATATCAGCTATATATTCGTGCAATGGTGGGCCAGCAGTGCACGGCTCAGCTTCTGTTCGGCTCGGCGACTTATACGCTGAGGAGGAGTGGGAGCTTCTTGTGGAGTTGCGAGTTCCACGTGCTCCTAGAGCTCGTGGACCCCAAACTGTAATGTCCGCCCGGTGTCTCTACAAGGATCCTGCTACTCAGGAGACAGTGCATGGCAGAAAACAGGCACTGTTAGTACCTCTCGCGGATGCCGTGAGATCTTCGTCGTGTCCGAAGATCGAACGGTTGAGAGGGCTGTTTATTACAACCCGCGCCGTAGCCGAGTCACGGAGATTGGTTGAGCACAATGACTACCCTAGTGCGCATCATTTGCTTGCGTCGGCTCGGGCTCTGCTCATGAAATCCAGCTCAGTATCGACTGACGAGTACGTGCGCGTCTTGGAAGCTGAGCTGTCAGAGCTGCATTGGAGAAGACAGCAGAAGATCATGGAGGCGGAACAGCAGATGATGATGATCCAACGGTGGAGAGGCGGTGGTGAGAGGGACGAGGCGGTGACAGCGGTTTTGGATGAAAATGAGGAGCCCCTCACACCGACTTCGGCTTGGAGAGCGGCTGAGAAGCTGGCTAAGGTGGCTATGATGAAGAAATCGCTTAATAGAGTTGGCGACTTGCACGGCTTTGAAAATGCTAGGTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
VWA_2 zf-RING_11 zf-RING_2

Protein Analysis

746

Amino Acids

82.03

Weight (kDa)

9.13

Isoelectric Point (pI)

50.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 113 - 159 2.3e-07 Ring finger domain
zf-RING_11 PF17123 114 - 143 1.8e-08 RING-like zinc finger
VWA PF00092 332 - 447 6.4e-14 von Willebrand factor type A domain
VWA_3 PF13768 332 - 472 1.6e-10 von Willebrand factor type A domain
VWA_2 PF13519 333 - 439 6.2e-19 von Willebrand factor type A domain
WAV3_C PF25243 604 - 674 4.5e-36 E3 ubiquitin-protein ligase WAV3-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014171)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49665
fragaria_vesca FvH4_5g33780 FvH4_5g33780
malus_domestica MD08G1207200.v1.1 MD15G1391600.v1.1
prunus_persica Prupe.1G540900_v2.0.a1
pyrus_communis pycom08g17950
rosa_chinensis RchiOBHm_Chr7g0233091
rosa_laevigata RLG00000001300
rosa_multiflora Rmu_sc0016344.1_g000006
rosa_roxburghii Rroxscaffold_3G00227690
rosa_rugosa Rorug07G0278100
rosa_samantha Rh7AG433300 Rh7BG406100 Rh7CG452700 Rh7DG421900
rosa_wichuraiana Rw7G035730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 749
AatII GACGTC 5 cut(s) 495, 552, 698, 777, 1017
Acc16I TGCGCA 1 cut(s) 1902
AccB1I GGYRCC 1 cut(s) 949
AccBSI CCGCTC 1 cut(s) 2150
AccII CGCG 9 cut(s) 984, 986, 1037, 1059, 1422, 1547, 1784, 1851, 1974
AclI AACGTT 1 cut(s) 1174
AclWI GGATC 6 cut(s) 41, 282, 710, 1721, 1734, 2047
AcoI YGGCCR 4 cut(s) 370, 1210, 1287, 1438
AcsI RAATTY 2 cut(s) 326, 1512
AcvI CACGTG 1 cut(s) 1670
AcyI GRCGYC 7 cut(s) 492, 549, 695, 774, 1014, 1233, 1458
AfaI GTAC 6 cut(s) 97, 115, 232, 665, 1776, 1967
AfiI CCNNNNNNNGG 3 cut(s) 1098, 1447, 1866
AgsI TTSAA 8 cut(s) 298, 325, 355, 1054, 1150, 1359, 1394, 2222
AhdI GACNNNNNGTC 1 cut(s) 676
AjnI CCWGG 5 cut(s) 116, 183, 482, 786, 1440
Alw21I GWGCWC 6 cut(s) 269, 1011, 1593, 1675, 1684, 1884
Alw26I GTCTC 5 cut(s) 684, 702, 758, 1721, 1736
Alw44I GTGCAC 1 cut(s) 1589
AlwI GGATC 6 cut(s) 41, 282, 710, 1721, 1734, 2047
AlwNI CAGNNNCTG 3 cut(s) 111, 1604, 1768
Ama87I CYCGRG 5 cut(s) 42, 157, 262, 761, 1923
AoxI GGCC 8 cut(s) 370, 603, 747, 1161, 1210, 1287, 1438, 1580
ApaLI GTGCAC 1 cut(s) 1589
ApeKI GCWGC 7 cut(s) 141, 175, 336, 339, 402, 444, 1999
ApoI RAATTY 2 cut(s) 326, 1512
ArsI GACNNNNNNTTYG 2 cut(s) 2086, 2118
AspLEI GCGC 7 cut(s) 986, 988, 1037, 1061, 1853, 1903, 1974
AspS9I GGNCC 3 cut(s) 1162, 1580, 1688
AsuC2I CCSGG 2 cut(s) 1378, 1711
AsuHPI GGTGA 5 cut(s) 630, 1241, 1339, 2087, 2104
AvaI CYCGRG 5 cut(s) 42, 157, 262, 761, 1923
AvaII GGWCC 1 cut(s) 1688
BaeGI GKGCMC 1 cut(s) 1593
BaeI ACNNNNGTAYC 2 cut(s) 912, 945
BalI TGGCCA 2 cut(s) 1289, 1440
BamHI GGATCC 1 cut(s) 1726
BanI GGYRCC 1 cut(s) 949
BanII GRGCYC 5 cut(s) 269, 917, 1684, 1930, 2124
BarI GAAGNNNNNNTAC 2 cut(s) 647, 679
BauI CACGAG 1 cut(s) 1683
BbrPI CACGTG 1 cut(s) 1670
BbsI GAAGAC 2 cut(s) 747, 2017
Bbv12I GWGCWC 6 cut(s) 269, 1011, 1593, 1675, 1684, 1884
BbvCI CCTCAGC 2 cut(s) 1452, 1629
BbvI GCAGC 7 cut(s) 153, 187, 326, 348, 414, 456, 1986
BccI CCATC 2 cut(s) 515, 719
BceAI ACGGC 7 cut(s) 408, 734, 1176, 1609, 1775, 1838, 2230
BcgI CGANNNNNNTGC 4 cut(s) 9, 43, 1237, 1271
BciT130I CCWGG 5 cut(s) 118, 185, 484, 788, 1442
BcnI CCSGG 2 cut(s) 1378, 1711
BcoDI GTCTC 5 cut(s) 684, 702, 758, 1721, 1736
BfaI CTAG 4 cut(s) 1182, 1677, 1896, 2229
BfmI CTRYAG 2 cut(s) 340, 838
BglII AGATCT 1 cut(s) 1796
BlpI GCTNAGC 2 cut(s) 1597, 1986
BmcAI AGTACT 1 cut(s) 232
Bme1390I CCNGG 7 cut(s) 118, 185, 484, 788, 1378, 1442, 1711
Bme18I GGWCC 1 cut(s) 1688
BmeRI GACNNNNNGTC 1 cut(s) 676
BmeT110I CYCGRG 5 cut(s) 42, 157, 262, 761, 1923
BmgT120I GGNCC 3 cut(s) 1162, 1580, 1688
BmiI GGNNCC 9 cut(s) 916, 951, 1090, 1418, 1446, 1542, 1690, 1728, 2121
BmrFI CCNGG 7 cut(s) 118, 185, 484, 788, 1378, 1442, 1711
BmrI ACTGGG 1 cut(s) 1394
BmsI GCATC 4 cut(s) 814, 988, 1777, 1912
BmuI ACTGGG 1 cut(s) 1394
BpiI GAAGAC 2 cut(s) 747, 2017
BpmI CTGGAG 2 cut(s) 118, 1028
Bpu10I CCTNAGC 3 cut(s) 1452, 1629, 2166
Bpu1102I GCTNAGC 2 cut(s) 1597, 1986
BpuEI CTTGAG 3 cut(s) 236, 1258, 1528
BpuMI CCSGG 2 cut(s) 1378, 1711
Bsa29I ATCGAT 1 cut(s) 993
BsaAI YACGTR 2 cut(s) 1670, 1969
BsaBI GATNNNNATC 1 cut(s) 2051
BsaHI GRCGYC 7 cut(s) 492, 549, 695, 774, 1014, 1233, 1458
BsaI GGTCTC 1 cut(s) 758
BsaJI CCNNGG 7 cut(s) 183, 448, 600, 787, 1165, 1213, 1545
BsaXI ACNNNNNCTCC 4 cut(s) 217, 247, 2056, 2086
Bsc4I CCNNNNNNNGG 3 cut(s) 1098, 1447, 1866
Bse118I RCCGGY 6 cut(s) 368, 1031, 1098, 1197, 1427, 1447
Bse1I ACTGG 6 cut(s) 13, 135, 228, 1283, 1290, 1400
Bse3DI GCAATG 1 cut(s) 1579
Bse8I GATNNNNATC 1 cut(s) 2051
BseBI CCWGG 5 cut(s) 118, 185, 484, 788, 1442
BseCI ATCGAT 1 cut(s) 993
BseDI CCNNGG 7 cut(s) 183, 448, 600, 787, 1165, 1213, 1545
BseGI GGATG 6 cut(s) 507, 552, 705, 711, 1792, 2113
BseJI GATNNNNATC 1 cut(s) 2051
BseLI CCNNNNNNNGG 3 cut(s) 1098, 1447, 1866
BseMI GCAATG 1 cut(s) 1579
BseMII CTCAG 7 cut(s) 1443, 1611, 1620, 1751, 1962, 1977, 2145
BseNI ACTGG 6 cut(s) 13, 135, 228, 1283, 1290, 1400
BsePI GCGCGC 1 cut(s) 984
BseRI GAGGAG 6 cut(s) 273, 491, 746, 1646, 1649, 2132
BseSI GKGCMC 1 cut(s) 1593
BseXI GCAGC 7 cut(s) 153, 187, 326, 348, 414, 456, 1986
BseYI CCCAGC 3 cut(s) 86, 171, 1519
BsgI GTGCAG 3 cut(s) 13, 421, 1520
Bsh1236I CGCG 9 cut(s) 984, 986, 1037, 1059, 1422, 1547, 1784, 1851, 1974
Bsh1285I CGRYCG 2 cut(s) 993, 1099
BshFI GGCC 8 cut(s) 372, 605, 749, 1163, 1212, 1289, 1440, 1582
BshNI GGYRCC 1 cut(s) 949
BshVI ATCGAT 1 cut(s) 993
BsiEI CGRYCG 2 cut(s) 993, 1099
BsiHKAI GWGCWC 6 cut(s) 269, 1011, 1593, 1675, 1684, 1884
BsiHKCI CYCGRG 5 cut(s) 42, 157, 262, 761, 1923
BsiSI CCGG 9 cut(s) 369, 1032, 1099, 1198, 1378, 1428, 1448, 1533, 1711
BslFI GGGAC 3 cut(s) 69, 479, 2096
BslI CCNNNNNNNGG 3 cut(s) 1098, 1447, 1866
BsmAI GTCTC 5 cut(s) 684, 702, 758, 1721, 1736
BsmBI CGTCTC 1 cut(s) 702
BsmFI GGGAC 3 cut(s) 69, 479, 2096
BsnI GGCC 8 cut(s) 372, 605, 749, 1163, 1212, 1289, 1440, 1582
Bso31I GGTCTC 1 cut(s) 758
BsoBI CYCGRG 5 cut(s) 42, 157, 262, 761, 1923
Bsp1286I GDGCHC 9 cut(s) 269, 917, 1011, 1593, 1675, 1684, 1884, 1930, 2124
Bsp1720I GCTNAGC 2 cut(s) 1597, 1986
Bsp19I CCATGG 2 cut(s) 448, 1165
BspANI GGCC 8 cut(s) 372, 605, 749, 1163, 1212, 1289, 1440, 1582
BspCNI CTCAG 7 cut(s) 1444, 1610, 1621, 1750, 1961, 1978, 2146
BspDI ATCGAT 1 cut(s) 993
BspFNI CGCG 9 cut(s) 984, 986, 1037, 1059, 1422, 1547, 1784, 1851, 1974
BspHI TCATGA 3 cut(s) 1315, 1405, 1935
BspLI GGNNCC 9 cut(s) 916, 951, 1090, 1418, 1446, 1542, 1690, 1728, 2121
BspMAI CTGCAG 2 cut(s) 344, 842
BspPI GGATC 6 cut(s) 41, 282, 710, 1721, 1734, 2047
BspT107I GGYRCC 1 cut(s) 949
BspTNI GGTCTC 1 cut(s) 758
BsrBI CCGCTC 1 cut(s) 2150
BsrDI GCAATG 1 cut(s) 1579
BsrFI RCCGGY 6 cut(s) 368, 1031, 1098, 1197, 1427, 1447
BsrI ACTGG 6 cut(s) 13, 135, 228, 1283, 1290, 1400
BssAI RCCGGY 6 cut(s) 368, 1031, 1098, 1197, 1427, 1447
BssECI CCNNGG 7 cut(s) 183, 448, 600, 787, 1165, 1213, 1545
BssHII GCGCGC 1 cut(s) 984
BssNI GRCGYC 7 cut(s) 492, 549, 695, 774, 1014, 1233, 1458
BssSI CACGAG 1 cut(s) 1683
BssT1I CCWWGG 3 cut(s) 448, 1165, 1213
Bst2BI CACGAG 1 cut(s) 1683
Bst2UI CCWGG 5 cut(s) 118, 185, 484, 788, 1442
Bst4CI ACNGT 9 cut(s) 242, 1006, 1137, 1313, 1699, 1747, 1770, 1824, 2061
Bst6I CTCTTC 4 cut(s) 314, 687, 817, 1145
BstACI GRCGYC 7 cut(s) 492, 549, 695, 774, 1014, 1233, 1458
BstAPI GCANNNNNTGC 2 cut(s) 348, 1909
BstBAI YACGTR 2 cut(s) 1670, 1969
BstC8I GCNNGC 9 cut(s) 21, 597, 986, 1203, 1207, 1449, 1584, 1914, 2163
BstDEI CTNAG 9 cut(s) 1251, 1452, 1597, 1629, 1737, 1948, 1986, 2154, 2166
BstDSI CCRYGG 3 cut(s) 448, 1165, 1545
BstF5I GGATG 6 cut(s) 507, 552, 705, 711, 1792, 2113
BstFNI CGCG 9 cut(s) 984, 986, 1037, 1059, 1422, 1547, 1784, 1851, 1974
BstHHI GCGC 7 cut(s) 986, 988, 1037, 1061, 1853, 1903, 1974
BstMAI GTCTC 5 cut(s) 684, 702, 758, 1721, 1736
BstMCI CGRYCG 2 cut(s) 993, 1099
BstNI CCWGG 5 cut(s) 118, 185, 484, 788, 1442
BstNSI RCATGY 1 cut(s) 1209
BstSCI CCNGG 7 cut(s) 116, 183, 482, 786, 1376, 1440, 1709
BstSFI CTRYAG 2 cut(s) 340, 838
BstSLI GKGCMC 1 cut(s) 1593
BstUI CGCG 9 cut(s) 984, 986, 1037, 1059, 1422, 1547, 1784, 1851, 1974
BstV1I GCAGC 7 cut(s) 153, 187, 326, 348, 414, 456, 1986
BstV2I GAAGAC 2 cut(s) 747, 2017
BstX2I RGATCY 3 cut(s) 46, 1726, 1796
BstXI CCANNNNNNTGG 1 cut(s) 1069
BstYI RGATCY 3 cut(s) 46, 1726, 1796
Bsu15I ATCGAT 1 cut(s) 993
BsuRI GGCC 8 cut(s) 372, 605, 749, 1163, 1212, 1289, 1440, 1582
BsuTUI ATCGAT 1 cut(s) 993
BtgI CCRYGG 3 cut(s) 448, 1165, 1545
BtgZI GCGATG 2 cut(s) 965, 1065
BtsCI GGATG 6 cut(s) 507, 552, 705, 711, 1792, 2113
BtsI GCAGTG 1 cut(s) 1593
BtsIMutI CAGTG 6 cut(s) 142, 1290, 1297, 1593, 1752, 1766
Cac8I GCNNGC 9 cut(s) 21, 597, 986, 1203, 1207, 1449, 1584, 1914, 2163
CaiI CAGNNNCTG 3 cut(s) 111, 1604, 1768
CciI TCATGA 3 cut(s) 1315, 1405, 1935
CfoI GCGC 7 cut(s) 986, 988, 1037, 1061, 1853, 1903, 1974
Cfr10I RCCGGY 6 cut(s) 368, 1031, 1098, 1197, 1427, 1447
Cfr13I GGNCC 3 cut(s) 1162, 1580, 1688
Cfr42I CCGCGG 1 cut(s) 1548
ClaI ATCGAT 1 cut(s) 993
CseI GACGC 5 cut(s) 349, 1241, 1466, 1905, 1963
Csp6I GTAC 6 cut(s) 96, 114, 231, 664, 1775, 1966
CviQI GTAC 6 cut(s) 96, 114, 231, 664, 1775, 1966
DdeI CTNAG 9 cut(s) 1251, 1452, 1597, 1629, 1737, 1948, 1986, 2154, 2166
DraI TTTAAA 2 cut(s) 850, 969
DrdI GACNNNNNNGTC 1 cut(s) 749
DriI GACNNNNNGTC 1 cut(s) 676
DseDI GACNNNNNNGTC 1 cut(s) 749
EaeI YGGCCR 4 cut(s) 370, 1210, 1287, 1438
Eam1104I CTCTTC 4 cut(s) 314, 687, 817, 1145
Eam1105I GACNNNNNGTC 1 cut(s) 676
EarI CTCTTC 4 cut(s) 314, 687, 817, 1145
EciI GGCGGA 2 cut(s) 1696, 2048
Ecl136II GAGCTC 2 cut(s) 267, 1682
Eco130I CCWWGG 3 cut(s) 448, 1165, 1213
Eco24I GRGCYC 5 cut(s) 269, 917, 1684, 1930, 2124
Eco31I GGTCTC 1 cut(s) 758
Eco32I GATATC 1 cut(s) 1554
Eco47I GGWCC 1 cut(s) 1688
Eco53kI GAGCTC 2 cut(s) 267, 1682
Eco72I CACGTG 1 cut(s) 1670
Eco88I CYCGRG 5 cut(s) 42, 157, 262, 761, 1923
EcoICRI GAGCTC 2 cut(s) 267, 1682
EcoRI GAATTC 1 cut(s) 1512
EcoRII CCWGG 5 cut(s) 116, 183, 482, 786, 1440
EcoRV GATATC 1 cut(s) 1554
EcoT14I CCWWGG 3 cut(s) 448, 1165, 1213
EcoT38I GRGCYC 5 cut(s) 269, 917, 1684, 1930, 2124
ErhI CCWWGG 3 cut(s) 448, 1165, 1213
Esp3I CGTCTC 1 cut(s) 702
FaqI GGGAC 3 cut(s) 69, 479, 2096
FauI CCCGC 4 cut(s) 604, 933, 1552, 1856
FokI GGATG 6 cut(s) 494, 539, 692, 698, 1799, 2120
FriOI GRGCYC 5 cut(s) 269, 917, 1684, 1930, 2124
FspAI RTGCGCAY 1 cut(s) 1902
FspBI CTAG 4 cut(s) 1182, 1677, 1896, 2229
FspI TGCGCA 1 cut(s) 1902
GlaI GCGC 7 cut(s) 985, 987, 1036, 1060, 1852, 1902, 1973
GsaI CCCAGC 3 cut(s) 90, 175, 1523
GsuI CTGGAG 2 cut(s) 118, 1028
HaeIII GGCC 8 cut(s) 372, 605, 749, 1163, 1212, 1289, 1440, 1582
HapII CCGG 9 cut(s) 369, 1032, 1099, 1198, 1378, 1428, 1448, 1533, 1711
HgaI GACGC 5 cut(s) 349, 1241, 1466, 1905, 1963
HhaI GCGC 7 cut(s) 986, 988, 1037, 1061, 1853, 1903, 1974
Hin1I GRCGYC 7 cut(s) 492, 549, 695, 774, 1014, 1233, 1458
Hin6I GCGC 7 cut(s) 984, 986, 1035, 1059, 1851, 1901, 1972
HinP1I GCGC 7 cut(s) 984, 986, 1035, 1059, 1851, 1901, 1972
HincII GTYRAC 2 cut(s) 1172, 1195
HindII GTYRAC 2 cut(s) 1172, 1195
HinfI GANTC 7 cut(s) 59, 626, 677, 887, 1279, 1529, 1862
HpaII CCGG 9 cut(s) 369, 1032, 1099, 1198, 1378, 1428, 1448, 1533, 1711
HphI GGTGA 5 cut(s) 630, 1241, 1339, 2087, 2104
Hpy166II GTNNAC 6 cut(s) 630, 1172, 1195, 1374, 1591, 1688
Hpy188III TCNNGA 8 cut(s) 44, 159, 262, 1045, 1316, 1406, 1739, 1936
Hpy8I GTNNAC 6 cut(s) 630, 1172, 1195, 1374, 1591, 1688
HpyAV CCTTC 3 cut(s) 984, 1179, 1237
HpyCH4III ACNGT 9 cut(s) 242, 1006, 1137, 1313, 1699, 1747, 1770, 1824, 2061
HpyCH4IV ACGT 9 cut(s) 251, 492, 549, 695, 774, 1014, 1174, 1669, 1968
HpyF3I CTNAG 9 cut(s) 1251, 1452, 1597, 1629, 1737, 1948, 1986, 2154, 2166
HpySE526I ACGT 9 cut(s) 251, 492, 549, 695, 774, 1014, 1174, 1669, 1968
Hsp92I GRCGYC 7 cut(s) 492, 549, 695, 774, 1014, 1233, 1458
HspAI GCGC 7 cut(s) 984, 986, 1035, 1059, 1851, 1901, 1972
KroI GCCGGC 1 cut(s) 1447
KroNI GCCGGC 1 cut(s) 1449
KspI CCGCGG 1 cut(s) 1548
Lsp1109I GCAGC 7 cut(s) 153, 187, 326, 348, 414, 456, 1986
LweI GCATC 4 cut(s) 814, 988, 1777, 1912
MaeI CTAG 4 cut(s) 1182, 1677, 1896, 2229
MaeII ACGT 9 cut(s) 251, 492, 549, 695, 774, 1014, 1174, 1669, 1968
MaeIII GTNAC 4 cut(s) 1000, 1229, 1863, 2092
MbiI CCGCTC 1 cut(s) 2150
MflI RGATCY 3 cut(s) 46, 1726, 1796
MhlI GDGCHC 9 cut(s) 269, 917, 1011, 1593, 1675, 1684, 1884, 1930, 2124
MlsI TGGCCA 2 cut(s) 1289, 1440
MluCI AATT 2 cut(s) 326, 1512
MluNI TGGCCA 2 cut(s) 1289, 1440
MlyI GAGTC 3 cut(s) 635, 686, 1871
MmeI TCCRAC 5 cut(s) 294, 716, 1116, 1332, 2080
Mox20I TGGCCA 2 cut(s) 1289, 1440
MroNI GCCGGC 1 cut(s) 1447
MscI TGGCCA 2 cut(s) 1289, 1440
MseI TTAA 4 cut(s) 849, 968, 2193, 2236
Msp20I TGGCCA 2 cut(s) 1289, 1440
MspA1I CMGCKG 5 cut(s) 339, 1020, 1519, 1547, 2099
MspI CCGG 9 cut(s) 369, 1032, 1099, 1198, 1378, 1428, 1448, 1533, 1711
MspR9I CCNGG 7 cut(s) 118, 185, 484, 788, 1378, 1442, 1711
MvaI CCWGG 5 cut(s) 118, 185, 484, 788, 1442
MvnI CGCG 9 cut(s) 984, 986, 1037, 1059, 1422, 1547, 1784, 1851, 1974
NaeI GCCGGC 1 cut(s) 1449
NciI CCSGG 2 cut(s) 1378, 1711
NcoI CCATGG 2 cut(s) 448, 1165
NgoMIV GCCGGC 1 cut(s) 1447
NlaIV GGNNCC 9 cut(s) 916, 951, 1090, 1418, 1446, 1542, 1690, 1728, 2121
NmeAIII GCCGAG 5 cut(s) 625, 1065, 1517, 1593, 1885
NmuCI GTSAC 3 cut(s) 1229, 1863, 2092
NsbI TGCGCA 1 cut(s) 1902
NspI RCATGY 1 cut(s) 1209
PaeI GCATGC 1 cut(s) 1209
PaeR7I CTCGAG 3 cut(s) 42, 157, 262
PagI TCATGA 3 cut(s) 1315, 1405, 1935
PauI GCGCGC 1 cut(s) 984
PcsI WCGNNNNNNNCGW 9 cut(s) 260, 465, 672, 759, 1063, 1092, 1419, 1788, 1808
PdiI GCCGGC 1 cut(s) 1449
PfeI GAWTC 4 cut(s) 59, 887, 1279, 1529
PflFI GACNNNGTC 1 cut(s) 773
Ple19I CGATCG 1 cut(s) 993
PleI GAGTC 3 cut(s) 634, 685, 1870
PmaCI CACGTG 1 cut(s) 1670
PmlI CACGTG 1 cut(s) 1670
PpsI GAGTC 3 cut(s) 634, 685, 1870
Ppu21I YACGTR 2 cut(s) 1670, 1969
Psp124BI GAGCTC 2 cut(s) 269, 1684
Psp1406I AACGTT 1 cut(s) 1174
Psp6I CCWGG 5 cut(s) 116, 183, 482, 786, 1440
PspCI CACGTG 1 cut(s) 1670
PspFI CCCAGC 3 cut(s) 86, 171, 1519
PspGI CCWGG 5 cut(s) 116, 183, 482, 786, 1440
PspN4I GGNNCC 9 cut(s) 916, 951, 1090, 1418, 1446, 1542, 1690, 1728, 2121
PspPI GGNCC 3 cut(s) 1162, 1580, 1688
PstI CTGCAG 2 cut(s) 344, 842
PstNI CAGNNNCTG 3 cut(s) 111, 1604, 1768
PsuI RGATCY 3 cut(s) 46, 1726, 1796
PsyI GACNNNGTC 1 cut(s) 773
PteI GCGCGC 1 cut(s) 984
PvuI CGATCG 1 cut(s) 993
PvuII CAGCTG 2 cut(s) 339, 1519
RsaI GTAC 6 cut(s) 97, 115, 232, 665, 1776, 1967
RsaNI GTAC 6 cut(s) 96, 114, 231, 664, 1775, 1966
SacI GAGCTC 2 cut(s) 269, 1684
SacII CCGCGG 1 cut(s) 1548
SaqAI TTAA 4 cut(s) 849, 968, 2193, 2236
Sau96I GGNCC 3 cut(s) 1162, 1580, 1688
ScaI AGTACT 1 cut(s) 232
SchI GAGTC 3 cut(s) 635, 686, 1871
ScrFI CCNGG 7 cut(s) 118, 185, 484, 788, 1378, 1442, 1711
SduI GDGCHC 9 cut(s) 269, 917, 1011, 1593, 1675, 1684, 1884, 1930, 2124
SfaNI GCATC 4 cut(s) 814, 988, 1777, 1912
SfcI CTRYAG 2 cut(s) 340, 838
Sfr274I CTCGAG 3 cut(s) 42, 157, 262
Sfr303I CCGCGG 1 cut(s) 1548
SgrBI CCGCGG 1 cut(s) 1548
SinI GGWCC 1 cut(s) 1688
SlaI CTCGAG 3 cut(s) 42, 157, 262
SmlI CTYRAG 6 cut(s) 42, 157, 215, 262, 1237, 1507
SmoI CTYRAG 6 cut(s) 42, 157, 215, 262, 1237, 1507
SphI GCATGC 1 cut(s) 1209
Sse9I AATT 2 cut(s) 326, 1512
SspMI CTAG 4 cut(s) 1182, 1677, 1896, 2229
SstI GAGCTC 2 cut(s) 269, 1684
StyD4I CCNGG 7 cut(s) 116, 183, 482, 786, 1376, 1440, 1709
StyI CCWWGG 3 cut(s) 448, 1165, 1213
TaaI ACNGT 9 cut(s) 242, 1006, 1137, 1313, 1699, 1747, 1770, 1824, 2061
TaiI ACGT 9 cut(s) 254, 495, 552, 698, 777, 1017, 1177, 1672, 1971
TaqII GACCGA 1 cut(s) 782
TasI AATT 2 cut(s) 326, 1512
TatI WGTACW 1 cut(s) 230
TauI GCSGC 5 cut(s) 539, 961, 1212, 1434, 2153
TfiI GAWTC 4 cut(s) 59, 887, 1279, 1529
Tru1I TTAA 4 cut(s) 849, 968, 2193, 2236
Tru9I TTAA 4 cut(s) 849, 968, 2193, 2236
TscAI CASTG 6 cut(s) 142, 1290, 1297, 1593, 1752, 1773
TseFI GTSAC 3 cut(s) 1229, 1863, 2092
TseI GCWGC 7 cut(s) 141, 175, 336, 339, 402, 444, 1999
Tsp45I GTSAC 3 cut(s) 1229, 1863, 2092
TspDTI ATGAA 7 cut(s) 213, 804, 1068, 1394, 1952, 2124, 2195
TspGWI ACGGA 1 cut(s) 1882
TspRI CASTG 6 cut(s) 142, 1290, 1297, 1593, 1752, 1773
Tth111I GACNNNGTC 1 cut(s) 773
VneI GTGCAC 1 cut(s) 1589
VpaK11BI GGWCC 1 cut(s) 1688
XapI RAATTY 2 cut(s) 326, 1512
XceI RCATGY 1 cut(s) 1209
XhoI CTCGAG 3 cut(s) 42, 157, 262
XspI CTAG 4 cut(s) 1182, 1677, 1896, 2229
ZraI GACGTC 5 cut(s) 493, 550, 696, 775, 1015
ZrmI AGTACT 1 cut(s) 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.