Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0015110

Physical Location & Seq

Genomic Coordinates Forward (+)

28193609 .. 28196719

Gene Structure 3111 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1219200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3111 bp

ATGGCCAATACTAAACTTGTGGTGGAAGTTCACGACGCAAGCGACCTGATGCCGAAAGACGGCGACGGTTTTGCGAGTCCCTTCGTGGAGGTAAACTTTGAAGGGGAGCGGCAGCGGACTCAGACCAAGCCAAAAGATCTCAATCCTAACTGGAACGAGAAGCTCGTCTTCAACATCAACGACCGTTCTCACCTCCCCCACAAGACCGTCGACATTGTCGTTTACAATGACAGACAAACTGGACACCATACGAACTTCCTCGGCCGAGTCAGAATCTCCGGCGTCTCCGTCCCTTTCTCCGAGTCTCAGGCCACCATCCAACGGTACCCGCTCGATAAGCGCGGTGTCTTCTCTCATGTCAAAGGCGATATTGCCCTCAGAATCTACGCTATTCAAGATTACATCAACAATGGCGACTTTGCTCCAACACCAGCACCACCCCCACCTACACTAAATGATGAATTTGTTACTAATAGTACTGGTGGTGCTGCTGGGACTACTCGTCCTCCTCCGCTGCAGGAAATCAATACTAATAGGATCGTTGAGGAGATTCATCACCACCATTTTGGGGGAGAGAAGATCAAGAAGAAGAAGGAAAAAGAAGTGAGAACTTTCCACTCCATCGGCACTGGGATGGGTGGTGGTGGTGGCGGCGGCGGTGGTTCTCATCCTCCTCCTCCAATGTCTTCGGGATTCGGATTTGAGACAATGAAGGAGAAGGCGCCCACCGTTGAAACAAGGACGGATTTCGCTCGGGCGGGTCCTGCCACGGTTATGCACATGCAGCAGCAGAACCCGGAATTTTCCCTGGTGGAGACAGATCCACCATTGGCGGCGCGGCGGTACAGAGGTTTTGGAGGGGACAAGACCTCGAGCACATACGATCTGGTTGAGCAGATGCATTACTTGTACGTGAGTGTGGTGAAGGCAAGAGATCTTCCAACCATGGATGTTACAGGAAGCCTTGATCCTTATGTGGAGGTGAAGCTTGGCAACTACAAAGGGGTGACCAAGCATGTGGACAAGGACCAGAACCCTGTGTGGCACCAGATTTTCGCCTTCTCGAAAGAGCGCGTGCAATCCAATTTGCTTGAAGTCACTGTCAAGGACAAGGATTTCACCAAGGATGATATCGTGGGGAGGCTACATTTCGATCTCAGCGAAGTCCCCCTTTGCATGCCGCCTGACAGCCCTTTGGCTCCTCAGTGGTACGGGTTGCTGGACATGCACGGGAACAAGGTCAGAGGGGAGCTTATGCTTGCTGTTTGGGTAGGGACTCAGGCCGATGAGTCCTTTCCCGATGCTTGGCATTCCGATGCACATGACATTAGCCACGTCAATCTCGCCACCACTCGATCAAAGGTTTACTTCTCCCCCAAGTTATATTACCTTCGAGTTCAAATTCTGCAAGCTCAGGATCTTGTTCCTTGGGATAGAAACCGCCCTTTGGATACATATGTCAAGGTACAGCTTGGGAACCAGCTGAGGGTCTCAAGGCCTTCCCAAGTGCATACTATTAACCCCGTTTGGAATGATGACCTCATGCTCGTGGCCTCCGAGCCTTTCGAAGATATCTTAGTTATATCAGTTGAGGACAGGGTTGGTCCTGGAAAGGATGAGATATTAGGGAGGGTGATTCTTTCGGTTAAAGACCTTCCGCAGAGAATTGACACTCATAAGCTCCCGGAGCCGATATGGTTCAATCTCCACAAGCCTTCAGCAGCTGCTGAAGAGGAAACTAAAAGACAGAAGGAGAAGTTCTCAAGTAAGATTCATCTGCGCCTCTGTTTAGACGTGGGTTATCATGTTCTTGATGAGTCCACACACTTTAGCAGCGATTTTCAGCCGTCGTCCAGGCACCTGAGGAAATCAGGCATTGGAATTCTTGAGCTTGGGATCCTGAGTGCCAGAAAATTTCCAGCTTTGAAGGGAAATGAGGGTAGGACTACTGATGCATACTGCGTGGCCAAGTATGGAAACAAGTGGGTGCGAACCAGAACGCTTCTCGACACTCTGTCTCCTCGCTGGAATGAGCAGTATACTTGGGAAGTTTATGATCCATGTACTGTAATCACCATCGGTGTTTTCGACAATTGCCATACCAACGGAAGCAGGGAAGACTCGAGAGATAAAAGGATTGGGAAGGTGAGAATTCGATTATCGACTTTAGAAATTCATCGAGTTTATACGCATTTCTATCCCCTGCTGATCCTCACACCCTCGGGTTTAAAAAAGCAAGGGGAACTTCAGTTAGCATTGAGGTTCACTTGCTTTGCTTGGGTTAACATGTTAGCTCAATATGGAAGACCATTGCTTCCAAAGATGCATTATGTCCAGCCTATACCTATTAGGCACCTTGATTGGCTCCGCCACCAAGCAATGCAGATTGTAGCAACGAGGCTCGCCCGTTCAGAGCCACCGCTCAGGCGGGAGATTGTCGAGTACATGTTAGACATAGACTACCATATGTTTAGTATGAGGAGAAGCAAAGCCAACTTCCACCGCATCATGTCGGTTCTCAGCGGGGTCATGACTGTCTGCAGATGGTTTAATGACATTTGCAACTGGAGAAACCCGATCACAACGTGCCTCGTCCATATCTTGTTTGTGATATTAGTTTGCTACCCAGAACTAATATTGCCCACAATTTTCCTCTACCTCTTTGTGATTGGTATATGGAACTACCGGCTCAGGCCAAGGCACCCACTTCACATGGATGCTCGGCTTTCGCAGGCAGAGGTTGCCCACGCGGATGAGTTGGACGAGGAATTTGACAGCTTCCCCACGGGTCGGCCCGCGGACATTGTGAGGATGAGGTACGACAGGTTGCGTAGCGTGGCGGGCAGGGTGCAGATGGTGGTTGGAGATTTGGCAACCCAAGGGGAAAGAGCACAAGCATTACTCAGCTGGAGGGATCCGAGAGCAACGGCAATCTTCATCATCTTCGCGTTGATCTGGGCCATGTTGATATACGTTACTCCGTTCCGGCTTATAGCAGTGCTGTTCGGTATCTACCTTCTTCGGCATCCACGGTTCAGGAGCAAGATGCATTCTGCACCAGTTAATTTCTTCAAGAGATTGCCATCCAAGTCAGATATGCTACTATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023052 GO:0031224 GO:0031974 GO:0031981 GO:0035556 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1037

Amino Acids

118.31

Weight (kDa)

8.92

Isoelectric Point (pI)

45.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	5 - 103	1.9e-19	C2 domain
C2	PF00168	302 - 404	6.1e-22	C2 domain
C2	PF00168	463 - 554	4.9e-17	C2 domain
C2	PF00168	627 - 735	3.5e-19	C2 domain
Pex24p	PF06398	831 - 1017	2.3e-06	Integral peroxisomal membrane peroxin
PRT_C	PF08372	880 - 1035	5.5e-77	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22610
fragaria_vesca	FvH4_5g32020
malus_domestica	MD08G1219200.v1.1 MD15G1407800.v1.1
prunus_persica	Prupe.1G553800_v2.0.a1
pyrus_communis	pycom08g19020 pycom15g36390
rosa_chinensis	RchiOBHm_Chr7g0228021
rosa_laevigata	RLG00000001595
rosa_multiflora	Rmu_sc0004858.1_g000016
rosa_rugosa	Rorug07G0245300
rosa_samantha	Rh7AG399300 Rh7BG380700 Rh7CG417200 Rh7DG394800
rosa_wichuraiana	Rw7G033170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	324
AccB1I	GGYRCC	6 cut(s)	324, 721, 1044, 1857, 2352, 2700
AccBSI	CCGCTC	3 cut(s)	109, 331, 2422
AccI	GTMKAC	2 cut(s)	210, 2039
AccII	CGCG	6 cut(s)	342, 838, 1074, 2750, 2798, 2948
AcoI	YGGCCR	3 cut(s)	3, 262, 1965
AcsI	RAATTY	8 cut(s)	461, 800, 1401, 1881, 1913, 2151, 2172, 2768
AcuI	CTGAAG	3 cut(s)	1701, 1749, 2231
AcyI	GRCGYC	2 cut(s)	282, 722
AdeI	CACNNNGTG	1 cut(s)	2586
AfaI	GTAC	9 cut(s)	326, 478, 845, 911, 1211, 1467, 2065, 2444, 2819
AfiI	CCNNNNNNNGG	7 cut(s)	59, 321, 568, 1305, 1447, 1486, 2790
AflIII	ACRYGT	2 cut(s)	2286, 2445
AgsI	TTSAA	9 cut(s)	101, 172, 395, 734, 1094, 1400, 1702, 1927, 3073
AhdI	GACNNNNNGTC	2 cut(s)	501, 2014
AjiI	CACGTC	2 cut(s)	1336, 1795
AjnI	CCWGG	3 cut(s)	807, 1606, 1853
Alw21I	GWGCWC	2 cut(s)	878, 2893
Alw26I	GTCTC	6 cut(s)	289, 309, 698, 809, 1495, 2022
AlwNI	CAGNNNCTG	2 cut(s)	1724, 1727
Ama87I	CYCGRG	4 cut(s)	753, 871, 2122, 2221
ApeKI	GCWGC	8 cut(s)	112, 488, 514, 784, 787, 1721, 1724, 1833
ApoI	RAATTY	8 cut(s)	461, 800, 1401, 1881, 1913, 2151, 2172, 2768
ArsI	GACNNNNNNTTYG	2 cut(s)	2753, 2785
Asp718I	GGTACC	1 cut(s)	324
AspLEI	GCGC	5 cut(s)	342, 724, 838, 1074, 1782
AspS9I	GGNCC	5 cut(s)	761, 1027, 1604, 2793, 2958
AsuC2I	CCSGG	2 cut(s)	797, 1685
AsuHPI	GGTGA	9 cut(s)	182, 548, 934, 994, 1018, 1111, 1645, 2065, 2158
AsuII	TTCGAA	1 cut(s)	1566
AvaI	CYCGRG	4 cut(s)	753, 871, 2122, 2221
AvaII	GGWCC	3 cut(s)	761, 1027, 1604
AxyI	CCTNAGG	1 cut(s)	1862
BaeI	ACNNNNGTAYC	4 cut(s)	835, 868, 1443, 1476
BalI	TGGCCA	2 cut(s)	5, 1967
BamHI	GGATCC	2 cut(s)	1896, 2914
BanI	GGYRCC	6 cut(s)	324, 721, 1044, 1857, 2352, 2700
BauI	CACGAG	1 cut(s)	1547
BbsI	GAAGAC	5 cut(s)	160, 340, 678, 2124, 2311
Bbv12I	GWGCWC	2 cut(s)	878, 2893
BbvCI	CCTCAGC	1 cut(s)	1484
BbvI	GCAGC	8 cut(s)	124, 475, 501, 796, 799, 1711, 1733, 1845
BccI	CCATC	7 cut(s)	323, 628, 629, 2084, 2538, 2848, 3091
BceAI	ACGGC	3 cut(s)	76, 1831, 2943
BcgI	CGANNNNNNTGC	2 cut(s)	53, 87
BciT130I	CCWGG	3 cut(s)	809, 1608, 1855
BciVI	GTATCC	1 cut(s)	1444
BcnI	CCSGG	2 cut(s)	797, 1685
BcoDI	GTCTC	6 cut(s)	289, 309, 698, 809, 1495, 2022
BfmI	CTRYAG	2 cut(s)	515, 2539
BfoI	RGCGCY	1 cut(s)	725
BfuI	GTATCC	1 cut(s)	1444
BglII	AGATCT	2 cut(s)	136, 934
BmcAI	AGTACT	1 cut(s)	478
Bme1390I	CCNGG	5 cut(s)	797, 809, 1608, 1685, 1855
Bme18I	GGWCC	3 cut(s)	761, 1027, 1604
BmeRI	GACNNNNNGTC	2 cut(s)	501, 2014
BmeT110I	CYCGRG	4 cut(s)	753, 871, 2122, 2221
BmgBI	CACGTC	2 cut(s)	1336, 1795
BmgT120I	GGNCC	5 cut(s)	761, 1027, 1604, 2793, 2958
BmrFI	CCNGG	5 cut(s)	797, 809, 1608, 1685, 1855
BmrI	ACTGGG	1 cut(s)	639
BmuI	ACTGGG	1 cut(s)	639
BpiI	GAAGAC	5 cut(s)	160, 340, 678, 2124, 2311
BplI	GAGNNNNNCTC	2 cut(s)	1745, 1777
BpmI	CTGGAG	2 cut(s)	2587, 2929
Bpu10I	CCTNAGC	4 cut(s)	1413, 1484, 2423, 2690
Bpu14I	TTCGAA	1 cut(s)	1566
BpuEI	CTTGAG	3 cut(s)	1477, 1747, 1907
BpuMI	CCSGG	2 cut(s)	797, 1685
BsaAI	YACGTR	1 cut(s)	913
BsaBI	GATNNNNATC	2 cut(s)	141, 3082
BsaHI	GRCGYC	2 cut(s)	282, 722
BsaI	GGTCTC	1 cut(s)	1495
BsaXI	ACNNNNNCTCC	4 cut(s)	490, 520, 2002, 2032
Bsc4I	CCNNNNNNNGG	7 cut(s)	59, 321, 568, 1305, 1447, 1486, 2790
Bse118I	RCCGGY	1 cut(s)	2685
Bse1I	ACTGG	6 cut(s)	155, 244, 484, 634, 2570, 3059
Bse21I	CCTNAGG	1 cut(s)	1862
Bse3DI	GCAATG	2 cut(s)	2309, 2385
Bse8I	GATNNNNATC	2 cut(s)	141, 3082
BseBI	CCWGG	3 cut(s)	809, 1608, 1855
BseJI	GATNNNNATC	2 cut(s)	141, 3082
BseLI	CCNNNNNNNGG	7 cut(s)	59, 321, 568, 1305, 1447, 1486, 2790
BseMI	GCAATG	2 cut(s)	2309, 2385
BseNI	ACTGG	6 cut(s)	155, 244, 484, 634, 2570, 3059
BseRI	GAGGAG	7 cut(s)	498, 560, 663, 666, 1191, 2010, 2494
BseX3I	CGGCCG	1 cut(s)	262
BseXI	GCAGC	8 cut(s)	124, 475, 501, 796, 799, 1711, 1733, 1845
BseYI	CCCAGC	1 cut(s)	491
BsgI	GTGCAG	2 cut(s)	2870, 3039
Bsh1236I	CGCG	6 cut(s)	342, 838, 1074, 2750, 2798, 2948
Bsh1285I	CGRYCG	2 cut(s)	184, 265
BshNI	GGYRCC	6 cut(s)	324, 721, 1044, 1857, 2352, 2700
BsiEI	CGRYCG	2 cut(s)	184, 265
BsiHKAI	GWGCWC	2 cut(s)	878, 2893
BsiHKCI	CYCGRG	4 cut(s)	753, 871, 2122, 2221
BsiSI	CCGG	5 cut(s)	279, 797, 1685, 2686, 2986
BslFI	GGGAC	6 cut(s)	63, 275, 508, 875, 1151, 1288
BslI	CCNNNNNNNGG	7 cut(s)	59, 321, 568, 1305, 1447, 1486, 2790
BsmAI	GTCTC	6 cut(s)	289, 309, 698, 809, 1495, 2022
BsmBI	CGTCTC	1 cut(s)	289
BsmFI	GGGAC	6 cut(s)	63, 275, 508, 875, 1151, 1288
BsmI	GAATGC	2 cut(s)	1309, 3049
Bso31I	GGTCTC	1 cut(s)	1495
BsoBI	CYCGRG	4 cut(s)	753, 871, 2122, 2221
Bsp119I	TTCGAA	1 cut(s)	1566
Bsp1286I	GDGCHC	2 cut(s)	878, 2893
Bsp19I	CCATGG	1 cut(s)	945
BspFNI	CGCG	6 cut(s)	342, 838, 1074, 2750, 2798, 2948
BspHI	TCATGA	1 cut(s)	2529
BspMAI	CTGCAG	2 cut(s)	519, 2543
BspT104I	TTCGAA	1 cut(s)	1566
BspT107I	GGYRCC	6 cut(s)	324, 721, 1044, 1857, 2352, 2700
BspTNI	GGTCTC	1 cut(s)	1495
BsrBI	CCGCTC	3 cut(s)	109, 331, 2422
BsrDI	GCAATG	2 cut(s)	2309, 2385
BsrFI	RCCGGY	1 cut(s)	2685
BsrI	ACTGG	6 cut(s)	155, 244, 484, 634, 2570, 3059
BssAI	RCCGGY	1 cut(s)	2685
BssNAI	GTATAC	1 cut(s)	2040
BssNI	GRCGYC	2 cut(s)	282, 722
BssSI	CACGAG	1 cut(s)	1547
BssT1I	CCWWGG	5 cut(s)	945, 1122, 1427, 2696, 2878
Bst1107I	GTATAC	1 cut(s)	2040
Bst2BI	CACGAG	1 cut(s)	1547
Bst2UI	CCWGG	3 cut(s)	809, 1608, 1855
Bst6I	CTCTTC	1 cut(s)	1725
BstACI	GRCGYC	2 cut(s)	282, 722
BstAPI	GCANNNNNTGC	1 cut(s)	2741
BstBAI	YACGTR	1 cut(s)	913
BstBI	TTCGAA	1 cut(s)	1566
BstC8I	GCNNGC	9 cut(s)	40, 1076, 1178, 1260, 1410, 2403, 2733, 2796, 2842
BstDSI	CCRYGG	5 cut(s)	768, 945, 2784, 2796, 3029
BstEII	GGTNACC	1 cut(s)	1006
BstFNI	CGCG	6 cut(s)	342, 838, 1074, 2750, 2798, 2948
BstH2I	RGCGCY	1 cut(s)	725
BstHHI	GCGC	5 cut(s)	342, 724, 838, 1074, 1782
BstMAI	GTCTC	6 cut(s)	289, 309, 698, 809, 1495, 2022
BstMCI	CGRYCG	2 cut(s)	184, 265
BstMWI	GCNNNNNNNGC	7 cut(s)	337, 764, 784, 1225, 1687, 2741, 2841
BstNI	CCWGG	3 cut(s)	809, 1608, 1855
BstNSI	RCATGY	6 cut(s)	784, 1019, 1180, 1228, 2290, 2449
BstPI	GGTNACC	1 cut(s)	1006
BstSCI	CCNGG	5 cut(s)	795, 807, 1606, 1683, 1853
BstSFI	CTRYAG	2 cut(s)	515, 2539
BstUI	CGCG	6 cut(s)	342, 838, 1074, 2750, 2798, 2948
BstV1I	GCAGC	8 cut(s)	124, 475, 501, 796, 799, 1711, 1733, 1845
BstV2I	GAAGAC	5 cut(s)	160, 340, 678, 2124, 2311
BstX2I	RGATCY	6 cut(s)	136, 820, 934, 1417, 1896, 2914
BstXI	CCANNNNNNTGG	2 cut(s)	566, 1018
BstYI	RGATCY	6 cut(s)	136, 820, 934, 1417, 1896, 2914
BstZ17I	GTATAC	1 cut(s)	2040
BstZI	CGGCCG	1 cut(s)	262
Bsu36I	CCTNAGG	1 cut(s)	1862
BsuI	GTATCC	1 cut(s)	1444
BtgI	CCRYGG	5 cut(s)	768, 945, 2784, 2796, 3029
BtrI	CACGTC	2 cut(s)	1336, 1795
BtsI	GCAGTG	1 cut(s)	3003
BtsIMutI	CAGTG	4 cut(s)	627, 1098, 1211, 3003
Cac8I	GCNNGC	9 cut(s)	40, 1076, 1178, 1260, 1410, 2403, 2733, 2796, 2842
CaiI	CAGNNNCTG	2 cut(s)	1724, 1727
CciI	TCATGA	1 cut(s)	2529
CfoI	GCGC	5 cut(s)	342, 724, 838, 1074, 1782
Cfr10I	RCCGGY	1 cut(s)	2685
Cfr13I	GGNCC	5 cut(s)	761, 1027, 1604, 2793, 2958
Cfr42I	CCGCGG	1 cut(s)	2799
CseI	GACGC	2 cut(s)	44, 271
Csp6I	GTAC	9 cut(s)	325, 477, 844, 910, 1210, 1466, 2064, 2443, 2818
CviQI	GTAC	9 cut(s)	325, 477, 844, 910, 1210, 1466, 2064, 2443, 2818
DinI	GGCGCC	1 cut(s)	723
DraI	TTTAAA	1 cut(s)	2229
DraIII	CACNNNGTG	1 cut(s)	2586
DriI	GACNNNNNGTC	2 cut(s)	501, 2014
EaeI	YGGCCR	3 cut(s)	3, 262, 1965
EagI	CGGCCG	1 cut(s)	262
Eam1104I	CTCTTC	1 cut(s)	1725
Eam1105I	GACNNNNNGTC	2 cut(s)	501, 2014
EarI	CTCTTC	1 cut(s)	1725
EciI	GGCGGA	1 cut(s)	2357
EclXI	CGGCCG	1 cut(s)	262
Eco130I	CCWWGG	5 cut(s)	945, 1122, 1427, 2696, 2878
Eco147I	AGGCCT	1 cut(s)	1498
Eco31I	GGTCTC	1 cut(s)	1495
Eco32I	GATATC	2 cut(s)	1132, 1573
Eco47I	GGWCC	3 cut(s)	761, 1027, 1604
Eco52I	CGGCCG	1 cut(s)	262
Eco57I	CTGAAG	3 cut(s)	1701, 1749, 2231
Eco81I	CCTNAGG	1 cut(s)	1862
Eco88I	CYCGRG	4 cut(s)	753, 871, 2122, 2221
Eco91I	GGTNACC	1 cut(s)	1006
EcoO109I	RGGNCCY	1 cut(s)	761
EcoO65I	GGTNACC	1 cut(s)	1006
EcoRI	GAATTC	2 cut(s)	1881, 2151
EcoRII	CCWGG	3 cut(s)	807, 1606, 1853
EcoRV	GATATC	2 cut(s)	1132, 1573
EcoT14I	CCWWGG	5 cut(s)	945, 1122, 1427, 2696, 2878
EcoT22I	ATGCAT	4 cut(s)	903, 1957, 2328, 3051
EgeI	GGCGCC	1 cut(s)	723
EheI	GGCGCC	1 cut(s)	723
ErhI	CCWWGG	5 cut(s)	945, 1122, 1427, 2696, 2878
Esp3I	CGTCTC	1 cut(s)	289
FalI	AAGNNNNNCTT	8 cut(s)	152, 184, 1155, 1187, 1352, 1384, 2229, 2261
FaqI	GGGAC	6 cut(s)	63, 275, 508, 875, 1151, 1288
FauI	CCCGC	6 cut(s)	336, 751, 2421, 2516, 2803, 2833
FauNDI	CATATG	2 cut(s)	1456, 2466
FblI	GTMKAC	2 cut(s)	210, 2039
GlaI	GCGC	5 cut(s)	341, 723, 837, 1073, 1781
GsaI	CCCAGC	1 cut(s)	495
GsuI	CTGGAG	2 cut(s)	2587, 2929
HaeII	RGCGCY	1 cut(s)	725
HapII	CCGG	5 cut(s)	279, 797, 1685, 2686, 2986
HgaI	GACGC	2 cut(s)	44, 271
HhaI	GCGC	5 cut(s)	342, 724, 838, 1074, 1782
Hin1I	GRCGYC	2 cut(s)	282, 722
Hin6I	GCGC	5 cut(s)	340, 722, 836, 1072, 1780
HinP1I	GCGC	5 cut(s)	340, 722, 836, 1072, 1780
HincII	GTYRAC	2 cut(s)	211, 2284
HindII	GTYRAC	2 cut(s)	211, 2284
HindIII	AAGCTT	1 cut(s)	986
HpaI	GTTAAC	1 cut(s)	2284
HpaII	CCGG	5 cut(s)	279, 797, 1685, 2686, 2986
HphI	GGTGA	9 cut(s)	182, 548, 934, 994, 1018, 1111, 1645, 2065, 2158
Hpy99I	CGWCG	4 cut(s)	38, 68, 212, 1852
HpyCH4IV	ACGT	5 cut(s)	912, 1335, 1794, 2585, 2973
HpyF10VI	GCNNNNNNNGC	7 cut(s)	337, 764, 784, 1225, 1687, 2741, 2841
HpySE526I	ACGT	5 cut(s)	912, 1335, 1794, 2585, 2973
Hsp92I	GRCGYC	2 cut(s)	282, 722
HspAI	GCGC	5 cut(s)	340, 722, 836, 1072, 1780
KasI	GGCGCC	1 cut(s)	721
KpnI	GGTACC	1 cut(s)	328
KspAI	GTTAAC	1 cut(s)	2284
KspI	CCGCGG	1 cut(s)	2799
LmnI	GCTCC	8 cut(s)	106, 427, 1204, 1249, 1686, 1687, 2370, 3039
Lsp1109I	GCAGC	8 cut(s)	124, 475, 501, 796, 799, 1711, 1733, 1845
MaeII	ACGT	5 cut(s)	912, 1335, 1794, 2585, 2973
MaeIII	GTNAC	5 cut(s)	466, 952, 1006, 1096, 2974
MbiI	CCGCTC	3 cut(s)	109, 331, 2422
MfeI	CAATTG	1 cut(s)	2092
MflI	RGATCY	6 cut(s)	136, 820, 934, 1417, 1896, 2914
MhlI	GDGCHC	2 cut(s)	878, 2893
MlsI	TGGCCA	2 cut(s)	5, 1967
MluNI	TGGCCA	2 cut(s)	5, 1967
Mly113I	GGCGCC	1 cut(s)	722
MlyI	GAGTC	8 cut(s)	85, 112, 276, 311, 1270, 1298, 1826, 2114
MmeI	TCCRAC	5 cut(s)	343, 449, 965, 2739, 2842
Mox20I	TGGCCA	2 cut(s)	5, 1967
Mph1103I	ATGCAT	4 cut(s)	903, 1957, 2328, 3051
MscI	TGGCCA	2 cut(s)	5, 1967
MseI	TTAA	6 cut(s)	1518, 1647, 2228, 2283, 2550, 3063
MslI	CAYNNNNRTG	6 cut(s)	632, 773, 1314, 1547, 2715, 2751
Msp20I	TGGCCA	2 cut(s)	5, 1967
MspA1I	CMGCKG	7 cut(s)	115, 514, 1483, 1724, 2523, 2798, 2907
MspI	CCGG	5 cut(s)	279, 797, 1685, 2686, 2986
MspR9I	CCNGG	5 cut(s)	797, 809, 1608, 1685, 1855
MunI	CAATTG	1 cut(s)	2092
Mva1269I	GAATGC	2 cut(s)	1309, 3049
MvaI	CCWGG	3 cut(s)	809, 1608, 1855
MvnI	CGCG	6 cut(s)	342, 838, 1074, 2750, 2798, 2948
MwoI	GCNNNNNNNGC	7 cut(s)	337, 764, 784, 1225, 1687, 2741, 2841
NarI	GGCGCC	1 cut(s)	722
NciI	CCSGG	2 cut(s)	797, 1685
NcoI	CCATGG	1 cut(s)	945
NdeI	CATATG	2 cut(s)	1456, 2466
NmeAIII	GCCGAG	3 cut(s)	240, 290, 2701
NmuCI	GTSAC	2 cut(s)	1006, 1096
NsiI	ATGCAT	4 cut(s)	903, 1957, 2328, 3051
NspI	RCATGY	6 cut(s)	784, 1019, 1180, 1228, 2290, 2449
NspV	TTCGAA	1 cut(s)	1566
PaeI	GCATGC	1 cut(s)	1180
PaeR7I	CTCGAG	2 cut(s)	871, 2122
PagI	TCATGA	1 cut(s)	2529
PceI	AGGCCT	1 cut(s)	1498
PciI	ACATGT	2 cut(s)	2286, 2445
PcsI	WCGNNNNNNNCGW	6 cut(s)	39, 162, 216, 1158, 1554, 2085
PctI	GAATGC	2 cut(s)	1309, 3049
PfeI	GAWTC	6 cut(s)	273, 381, 550, 693, 1636, 1771
PflFI	GACNNNGTC	1 cut(s)	215
PfoI	TCCNGGA	2 cut(s)	1606, 1683
PleI	GAGTC	8 cut(s)	84, 112, 275, 310, 1270, 1297, 1825, 2114
PluTI	GGCGCC	1 cut(s)	725
PpsI	GAGTC	8 cut(s)	84, 112, 275, 310, 1270, 1297, 1825, 2114
Ppu21I	YACGTR	1 cut(s)	913
PpuMI	RGGWCCY	1 cut(s)	761
PscI	ACATGT	2 cut(s)	2286, 2445
Psp5II	RGGWCCY	1 cut(s)	761
Psp6I	CCWGG	3 cut(s)	807, 1606, 1853
PspEI	GGTNACC	1 cut(s)	1006
PspFI	CCCAGC	1 cut(s)	491
PspGI	CCWGG	3 cut(s)	807, 1606, 1853
PspPI	GGNCC	5 cut(s)	761, 1027, 1604, 2793, 2958
PspPPI	RGGWCCY	1 cut(s)	761
PspXI	VCTCGAGB	1 cut(s)	871
PstI	CTGCAG	2 cut(s)	519, 2543
PstNI	CAGNNNCTG	2 cut(s)	1724, 1727
PsuI	RGATCY	6 cut(s)	136, 820, 934, 1417, 1896, 2914
PsyI	GACNNNGTC	1 cut(s)	215
PvuII	CAGCTG	3 cut(s)	1483, 1724, 2907
RsaI	GTAC	9 cut(s)	326, 478, 845, 911, 1211, 1467, 2065, 2444, 2819
RsaNI	GTAC	9 cut(s)	325, 477, 844, 910, 1210, 1466, 2064, 2443, 2818
RseI	CAYNNNNRTG	6 cut(s)	632, 773, 1314, 1547, 2715, 2751
SacII	CCGCGG	1 cut(s)	2799
SalI	GTCGAC	1 cut(s)	209
SaqAI	TTAA	6 cut(s)	1518, 1647, 2228, 2283, 2550, 3063
Sau96I	GGNCC	5 cut(s)	761, 1027, 1604, 2793, 2958
ScaI	AGTACT	1 cut(s)	478
SchI	GAGTC	8 cut(s)	85, 112, 276, 311, 1270, 1298, 1826, 2114
ScrFI	CCNGG	5 cut(s)	797, 809, 1608, 1685, 1855
SduI	GDGCHC	2 cut(s)	878, 2893
SfcI	CTRYAG	2 cut(s)	515, 2539
SfoI	GGCGCC	1 cut(s)	723
Sfr274I	CTCGAG	2 cut(s)	871, 2122
Sfr303I	CCGCGG	1 cut(s)	2799
SfuI	TTCGAA	1 cut(s)	1566
SgrBI	CCGCGG	1 cut(s)	2799
SinI	GGWCC	3 cut(s)	761, 1027, 1604
SlaI	CTCGAG	2 cut(s)	871, 2122
SmiMI	CAYNNNNRTG	6 cut(s)	632, 773, 1314, 1547, 2715, 2751
SmlI	CTYRAG	5 cut(s)	871, 1492, 1762, 1886, 2122
SmoI	CTYRAG	5 cut(s)	871, 1492, 1762, 1886, 2122
SphI	GCATGC	1 cut(s)	1180
SseBI	AGGCCT	1 cut(s)	1498
SspDI	GGCGCC	1 cut(s)	721
SspI	AATATT	1 cut(s)	2637
StuI	AGGCCT	1 cut(s)	1498
StyD4I	CCNGG	5 cut(s)	795, 807, 1606, 1683, 1853
StyI	CCWWGG	5 cut(s)	945, 1122, 1427, 2696, 2878
TaiI	ACGT	5 cut(s)	915, 1338, 1797, 2588, 2976
TatI	WGTACW	3 cut(s)	476, 2063, 2442
TauI	GCSGC	6 cut(s)	112, 654, 657, 836, 841, 1183
TfiI	GAWTC	6 cut(s)	273, 381, 550, 693, 1636, 1771
Tru1I	TTAA	6 cut(s)	1518, 1647, 2228, 2283, 2550, 3063
Tru9I	TTAA	6 cut(s)	1518, 1647, 2228, 2283, 2550, 3063
TscAI	CASTG	4 cut(s)	634, 1105, 1211, 3003
TseFI	GTSAC	2 cut(s)	1006, 1096
TseI	GCWGC	8 cut(s)	112, 488, 514, 784, 787, 1721, 1724, 1833
Tsp45I	GTSAC	2 cut(s)	1006, 1096
TspDTI	ATGAA	6 cut(s)	474, 542, 725, 1763, 2165, 2926
TspGWI	ACGGA	4 cut(s)	277, 758, 2121, 2970
TspRI	CASTG	4 cut(s)	634, 1105, 1211, 3003
Tth111I	GACNNNGTC	1 cut(s)	215
VpaK11BI	GGWCC	3 cut(s)	761, 1027, 1604
XapI	RAATTY	8 cut(s)	461, 800, 1401, 1881, 1913, 2151, 2172, 2768
XceI	RCATGY	6 cut(s)	784, 1019, 1180, 1228, 2290, 2449
XhoI	CTCGAG	2 cut(s)	871, 2122
XmiI	GTMKAC	2 cut(s)	210, 2039
ZrmI	AGTACT	1 cut(s)	478
Zsp2I	ATGCAT	4 cut(s)	903, 1957, 2328, 3051

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.