Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0015110

Physical Location & Seq

Genomic Coordinates Reverse (-)

17945382 .. 17948507

Gene Structure 3126 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001595

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3126 bp

ATGATCAAACTTATAGTCGAAGTTCATGATGCCGGTGACCTCATGCCCAAAGACGGCGACGGCTTCGCCAGTCCCTTTGTGGAAGTAGACTTCGACCAGCAGAAACAGAGGACACGGACCAAGCCCAAAGACCTCAACCCTCAGTGGAACGAGCACCTGGTGTTCAACGTCACCGACCCAAGAGACCTTCCCAACAAGACCATCGAAGTGGTTGTCTACAATGACAGAAAAGCAGGCCACCACAAGAACTTTCTTGGCCGGGTCCGAATCTCCGGCGTCTCCGTCCCTCTGTCGGAGTCAGAAGCCACGGTCCAGCGTTACCCACTTGACAAAAGGGGCTTGTTTTCCAACATCAAAGGTGACATCGCTCTTCGAATCTATGCGGTTCAGGATTCCGGTAGCGCTCCTCAACAACAGCAGCAACAGGAATATGGTAATGTTGAAACTGCTACTGCTAATACCAGTGGCGTAGAGAATCCTCATATATTTTCGCCTCCTCCTCTGCAAGAAATCAATCCTAATACTCATAGGATGATGGATGAAGAAGCCGAGCATCATCACATGGCTGAGAAGATGATGAAGAAGAAGAAGGAACAGGAAGTGAGAACTTTTCACTCTATTGGAACAGGAGGTGCTGCTGCTGCTTCGTTCTCTCATGCTCACCCACCTTCATCCGGGTTTGGGTTTGAAACCCACCACCAAAAAGCACCCCAAGTTGAAACGAGGACGGATTTCGCCCGGGCGGGTCCGGGTCCGGGTGCTGCCACGGTTATGCATATGCAGGGACCTCCGAGGCAGAACCCGGAGTATGAGCTGGTGGAGACTAGTCCACCACTGGCGGCCCGCCTCCGGTATAGACCTGGCGGGTATACAGGGGATAAGACCTCCAGCACATATGATTTGGTGGAGCAGATGCATTACTTGTATGTGAGTGTGGTGAAGGCTAGAGATCTTCCAACCATGGATGTGACTGGAAGCCTTGATCCTTATGTGGAAGTGAAGCTTGGGAACTACAAGGGAGTCACGAGGCACTTGGACAAGAATCAAAACCCGGTGTGGAACCAGATTTTCGCTTTCTCCAAGGAGAGGCTGCAGTCGAATTTGCTGGAAGTTAGTGTGAAAGACAAGGATGTTTTGAAGGATGATCATGTGGGGAGAGTTTTATTTGATCTCACAGATGTCCCGGTTCGAGTTCCGCCGGATAGTCCTCTTGCTCCTCAGTGGTACAGATTGGAGGACAAGCACGGGGTCAAGGTTAGAGGGGAGATCATGCTTGCTGTTTGGATGGGGACTCAAGCTGATGAGTCATTTTCTGATGCTTGGCATTCTGATGCACATGACATTAGCCATGTCAACCTTGCTAGCACAAGATCAAAGGTTTACTTCTCACCGAAACTATATTATCTTAGAGTTCAAGTTCTTGAAGCTCAGGACCTCGTCCCTTTAGACAGAAGCAGAGCTCCGGACACATATGTGAGGATACAGCTTGGTAATCAGATGAGGGTCTCAAGGGCTTCCCAGGTTCGTACCATTAACCCAATTTGGAATGATGAGCTCATGTTGGTTGCATCTGAGCCATTAACCCAAGAAGTCTTAGTCATAGCGGTGGGTGACAAGATTGGACCTGGCAAGGATGACCTGTTAGGAATGGTGTATCTTCCGGTTAGAGACCTTCCACAAAGGCTGGACCATCATAAGCTTCCTGAGCCTCGCTGGTACAATCTCCAGAAGCCTTCAATGGCAGGTGAACAGGAAAGTGAGAAAAAGAAAGAGAAGTTTTCGAGCAAGATTCATCTCCGTCTCTGTTTGGATGCAGGGTATCATGTTCTTGATGAGTCTACACATTTTAGCAGTGACCTTCAGCCTTCTTCCAAGCACCTGAGGAAAGCAAACATTGGAATTCTGGAACTTGGGATTCTCAGTGCCAAGAATTTGCTCCCTATGAAGGGTAGGGAGGGTAGGACTACTGATTCATACTGTGTGGCCAAGTATGGGAACAAATGGATTCGAACTAGAACACTTCTCAACACTCTGAACCCTCGCTGGAATGAGCAGTATACTTGGGAAGTGTATGATCCATGTACTGTCATCACCGTTGGTGTTTTCGACAATCATCATATCAATGGAAGCCATGAAGACGCGAGGGACCAGAGGATTGGGAAGGTAAGGATCAGGTTGTCCACTTTAGAAACTGATCGGATTTATACACATTACTATCCCCTGTTGGTTTTGACGCCCTCTGGTCTGAAAAAGCATGGTGAACTTCAGTTGGCATTGAGGTTCAGTTCTACAGCTTGGGTCAATATGGTAGCTCAATATGGAAGACCATTGCTTCCAAAAATGCATTATATCAATCCTATACCTGTTAGGTATGTTGATTGGCTTCGCCACCAGGCAATGCAGATTGTGGCTGCACGACTATCTCGAGCAGAGCCACCACTGAGGCGGGAGGCTGTTGAGTACATGCTAGATGTAGATTACCATATGTTTAGTCTGAGGAGAAGCAAAGCCAACTTCCATCGTATCATGTCAGTTCTCAGCGGAGTCACCATGGTCTGCAGATGGTTCAATGACATTTGCACCTGGAGAAACCCGGTCACGACGTGCCTGGTGCATATTTTGTTCGTGATTCTAGTTTGCTACCCAGAGCTTATCCTGCCAACAATCTTCCTCTACCTCTTTGTGATTGGTTTATGGAACTATAGGTTCAGGCCAAGGCACCCACCTCACATGGATGCTCGGATTTCACAGGCAGAGTTTGCACACCCGGATGAATTGGACGAGGAATTCGACAGCTTCCCTACAAGTCGACCCTCGGACATTGTGAGAATGAGGTATGACAGGTTGCGTAGCGTGGCGGGTAGAGTGCAAACTGTGGTTGGAGATTTGGCAACCCAGGGGGAAAGAGCTCAAGCACTACTAAGCTGGAGGGATTCAAGGGCTACAGCAATCTTCATCATCTTGTCGTTGATCTGGGCAGTTTTCATATACATTACTCCCTTCCAGGTTGTGGCAGTGCTGATTGGGCTCTATATGCTACGGCATCCACGATTCCGAAGCAAGATGCCTTCTGCACCTGTTAATTTCTTTAAGAGATTGCCATCAAAGTCAGATATGTTGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005829 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0012505 GO:0016020 GO:0016021 GO:0019722 GO:0019932 GO:0023052 GO:0031224 GO:0031974 GO:0031981 GO:0035556 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046872 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

C2 PRT_C

Protein Analysis

1042

Amino Acids

119.06

Weight (kDa)

8.92

Isoelectric Point (pI)

46.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	3 - 106	4.8e-21	C2 domain
C2	PF00168	307 - 411	3e-22	C2 domain
C2	PF00168	468 - 574	6.3e-17	C2 domain
C2	PF00168	633 - 741	1.2e-21	C2 domain
PRT_C	PF08372	886 - 1041	1.6e-79	Plant phosphoribosyltransferase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015110)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22610
fragaria_vesca	FvH4_5g32020
malus_domestica	MD08G1219200.v1.1 MD15G1407800.v1.1
prunus_persica	Prupe.1G553800_v2.0.a1
pyrus_communis	pycom08g19020 pycom15g36390
rosa_chinensis	RchiOBHm_Chr7g0228021
rosa_laevigata	RLG00000001595
rosa_multiflora	Rmu_sc0004858.1_g000016
rosa_rugosa	Rorug07G0245300
rosa_samantha	Rh7AG399300 Rh7BG380700 Rh7CG417200 Rh7DG394800
rosa_wichuraiana	Rw7G033170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1733
Acc36I	ACCTGC	1 cut(s)	1733
AccB1I	GGYRCC	1 cut(s)	2718
AccB7I	CCANNNNNTGG	1 cut(s)	3010
AccI	GTMKAC	6 cut(s)	87, 216, 869, 1838, 2057, 2809
AccII	CGCG	1 cut(s)	2141
AccIII	TCCGGA	1 cut(s)	1462
AclWI	GGATC	3 cut(s)	977, 2069, 2177
AcoI	YGGCCR	2 cut(s)	256, 1983
AcsI	RAATTY	4 cut(s)	1099, 1899, 1930, 2786
AcuI	CTGAAG	2 cut(s)	1844, 2249
AcyI	GRCGYC	2 cut(s)	276, 2234
AdeI	CACNNNGTG	2 cut(s)	160, 2604
AfaI	GTAC	5 cut(s)	1226, 1528, 1718, 2083, 2462
AfeI	AGCGCT	1 cut(s)	403
AhlI	ACTAGT	1 cut(s)	824
AjiI	CACGTC	1 cut(s)	2604
AjnI	CCWGG	9 cut(s)	156, 859, 1518, 1624, 2391, 2582, 2607, 2895, 3003
AjuI	GAANNNNNNNTTGG	2 cut(s)	987, 1019
AleI	CACNNNNGTG	1 cut(s)	1472
Alw21I	GWGCWC	4 cut(s)	156, 1462, 1557, 2911
Alw26I	GTCTC	6 cut(s)	177, 283, 815, 1510, 1662, 1805
AlwI	GGATC	3 cut(s)	977, 2069, 2177
Ama87I	CYCGRG	2 cut(s)	738, 2424
Aor13HI	TCCGGA	1 cut(s)	1462
Aor51HI	AGCGCT	1 cut(s)	403
AoxI	GGCC	5 cut(s)	235, 256, 840, 1983, 2711
ApeKI	GCWGC	7 cut(s)	418, 635, 638, 641, 761, 1090, 2411
ApoI	RAATTY	4 cut(s)	1099, 1899, 1930, 2786
ArsI	GACNNNNNNTTYG	5 cut(s)	32, 198, 230, 2771, 2803
AspLEI	GCGC	1 cut(s)	404
AsuII	TTCGAA	2 cut(s)	373, 2008
AsuNHI	GCTAGC	1 cut(s)	1361
AvaI	CYCGRG	2 cut(s)	738, 2424
AxyI	CCTNAGG	1 cut(s)	1880
BalI	TGGCCA	1 cut(s)	1985
BanI	GGYRCC	1 cut(s)	2718
BanII	GRGCYC	4 cut(s)	1462, 1557, 2911, 3030
BauI	CACGAG	1 cut(s)	1024
BbsI	GAAGAC	2 cut(s)	2142, 2329
Bbv12I	GWGCWC	4 cut(s)	156, 1462, 1557, 2911
BbvI	GCAGC	7 cut(s)	430, 622, 625, 628, 748, 1077, 2398
BccI	CCATC	7 cut(s)	209, 529, 1279, 1698, 2526, 2556, 3109
BceAI	ACGGC	3 cut(s)	70, 76, 3056
BciT130I	CCWGG	9 cut(s)	158, 861, 1520, 1626, 2393, 2584, 2609, 2897, 3005
BciVI	GTATCC	1 cut(s)	1473
BclI	TGATCA	2 cut(s)	3, 1144
BcoDI	GTCTC	6 cut(s)	177, 283, 815, 1510, 1662, 1805
BcuI	ACTAGT	1 cut(s)	824
BfaI	CTAG	6 cut(s)	825, 945, 1362, 2013, 2468, 2633
BfmI	CTRYAG	5 cut(s)	1091, 2289, 2557, 2701, 2943
BfoI	RGCGCY	1 cut(s)	405
BfuAI	ACCTGC	1 cut(s)	1733
BfuI	GTATCC	1 cut(s)	1473
BglII	AGATCT	1 cut(s)	949
BisI	GCNGC	8 cut(s)	419, 636, 639, 642, 762, 840, 1091, 2412
BlsI	GCNGC	8 cut(s)	420, 637, 640, 643, 763, 841, 1092, 2413
BmeT110I	CYCGRG	2 cut(s)	738, 2424
BmgBI	CACGTC	1 cut(s)	2604
BmiI	GGNNCC	7 cut(s)	263, 747, 753, 786, 1061, 2147, 2720
BmtI	GCTAGC	1 cut(s)	1365
BpiI	GAAGAC	2 cut(s)	2142, 2329
BpmI	CTGGAG	4 cut(s)	871, 1709, 2605, 2947
Bpu10I	CCTNAGC	2 cut(s)	1428, 1704
Bpu14I	TTCGAA	2 cut(s)	373, 2008
BpuEI	CTTGAG	3 cut(s)	1278, 1492, 2895
BsaBI	GATNNNNATC	1 cut(s)	3100
BsaHI	GRCGYC	2 cut(s)	276, 2234
BsaI	GGTCTC	3 cut(s)	177, 1510, 1662
BsaWI	WCCGGW	4 cut(s)	395, 849, 1462, 1660
Bse118I	RCCGGY	1 cut(s)	32
Bse1I	ACTGG	4 cut(s)	69, 462, 840, 976
Bse21I	CCTNAGG	1 cut(s)	1880
Bse3DI	GCAATG	2 cut(s)	2327, 2403
Bse8I	GATNNNNATC	1 cut(s)	3100
BseAI	TCCGGA	1 cut(s)	1462
BseBI	CCWGG	9 cut(s)	158, 861, 1520, 1626, 2393, 2584, 2609, 2897, 3005
BseJI	GATNNNNATC	1 cut(s)	3100
BseMI	GCAATG	2 cut(s)	2327, 2403
BseNI	ACTGG	4 cut(s)	69, 462, 840, 976
BseRI	GAGGAG	5 cut(s)	396, 486, 489, 1206, 2512
BseXI	GCAGC	7 cut(s)	430, 622, 625, 628, 748, 1077, 2398
BsgI	GTGCAG	2 cut(s)	2397, 3057
Bsh1236I	CGCG	1 cut(s)	2141
BshFI	GGCC	5 cut(s)	237, 258, 842, 1985, 2713
BshNI	GGYRCC	1 cut(s)	2718
BsiHKAI	GWGCWC	4 cut(s)	156, 1462, 1557, 2911
BsiHKCI	CYCGRG	2 cut(s)	738, 2424
BslFI	GGGAC	7 cut(s)	57, 269, 798, 1166, 1303, 1424, 2159
BsmAI	GTCTC	6 cut(s)	177, 283, 815, 1510, 1662, 1805
BsmBI	CGTCTC	2 cut(s)	283, 1805
BsmFI	GGGAC	7 cut(s)	57, 269, 798, 1166, 1303, 1424, 2159
BsmI	GAATGC	1 cut(s)	1324
BsnI	GGCC	5 cut(s)	237, 258, 842, 1985, 2713
Bso31I	GGTCTC	3 cut(s)	177, 1510, 1662
BsoBI	CYCGRG	2 cut(s)	738, 2424
Bsp119I	TTCGAA	2 cut(s)	373, 2008
Bsp1286I	GDGCHC	5 cut(s)	156, 1462, 1557, 2911, 3030
Bsp13I	TCCGGA	1 cut(s)	1462
Bsp19I	CCATGG	2 cut(s)	960, 2550
BspANI	GGCC	5 cut(s)	237, 258, 842, 1985, 2713
BspEI	TCCGGA	1 cut(s)	1462
BspFNI	CGCG	1 cut(s)	2141
BspHI	TCATGA	1 cut(s)	25
BspLI	GGNNCC	7 cut(s)	263, 747, 753, 786, 1061, 2147, 2720
BspMAI	CTGCAG	2 cut(s)	1095, 2561
BspMI	ACCTGC	1 cut(s)	1733
BspOI	GCTAGC	1 cut(s)	1365
BspPI	GGATC	3 cut(s)	977, 2069, 2177
BspQI	GCTCTTC	1 cut(s)	375
BspT104I	TTCGAA	2 cut(s)	373, 2008
BspT107I	GGYRCC	1 cut(s)	2718
BspTNI	GGTCTC	3 cut(s)	177, 1510, 1662
BsrDI	GCAATG	2 cut(s)	2327, 2403
BsrFI	RCCGGY	1 cut(s)	32
BsrI	ACTGG	4 cut(s)	69, 462, 840, 976
BssAI	RCCGGY	1 cut(s)	32
BssNAI	GTATAC	2 cut(s)	870, 2058
BssNI	GRCGYC	2 cut(s)	276, 2234
BssSI	CACGAG	1 cut(s)	1024
BssT1I	CCWWGG	4 cut(s)	960, 1080, 2550, 2714
Bst1107I	GTATAC	2 cut(s)	870, 2058
Bst2BI	CACGAG	1 cut(s)	1024
Bst2UI	CCWGG	9 cut(s)	158, 861, 1520, 1626, 2393, 2584, 2609, 2897, 3005
Bst4CI	ACNGT	6 cut(s)	310, 769, 1979, 2086, 2095, 2875
Bst6I	CTCTTC	1 cut(s)	375
BstACI	GRCGYC	2 cut(s)	276, 2234
BstAPI	GCANNNNNTGC	1 cut(s)	2759
BstBI	TTCGAA	2 cut(s)	373, 2008
BstC8I	GCNNGC	4 cut(s)	235, 844, 1275, 1363
BstDSI	CCRYGG	4 cut(s)	306, 765, 960, 2550
BstEII	GGTNACC	1 cut(s)	35
BstFNI	CGCG	1 cut(s)	2141
BstH2I	RGCGCY	1 cut(s)	405
BstHHI	GCGC	1 cut(s)	404
BstMAI	GTCTC	6 cut(s)	177, 283, 815, 1510, 1662, 1805
BstMWI	GCNNNNNNNGC	6 cut(s)	641, 1705, 2656, 2759, 3025, 3034
BstNI	CCWGG	9 cut(s)	158, 861, 1520, 1626, 2393, 2584, 2609, 2897, 3005
BstNSI	RCATGY	1 cut(s)	2467
BstPI	GGTNACC	1 cut(s)	35
BstSFI	CTRYAG	5 cut(s)	1091, 2289, 2557, 2701, 2943
BstUI	CGCG	1 cut(s)	2141
BstV1I	GCAGC	7 cut(s)	430, 622, 625, 628, 748, 1077, 2398
BstV2I	GAAGAC	2 cut(s)	2142, 2329
BstX2I	RGATCY	1 cut(s)	949
BstXI	CCANNNNNNTGG	2 cut(s)	208, 2156
BstYI	RGATCY	1 cut(s)	949
BstZ17I	GTATAC	2 cut(s)	870, 2058
Bsu36I	CCTNAGG	1 cut(s)	1880
BsuI	GTATCC	1 cut(s)	1473
BsuRI	GGCC	5 cut(s)	237, 258, 842, 1985, 2713
BtgI	CCRYGG	4 cut(s)	306, 765, 960, 2550
BtgZI	GCGATG	1 cut(s)	349
BtrI	CACGTC	1 cut(s)	2604
BtsI	GCAGTG	2 cut(s)	1858, 3021
BtsIMutI	CAGTG	8 cut(s)	149, 469, 833, 1226, 1858, 1927, 2438, 3021
BveI	ACCTGC	1 cut(s)	1733
Cac8I	GCNNGC	4 cut(s)	235, 844, 1275, 1363
CciI	TCATGA	1 cut(s)	25
CfoI	GCGC	1 cut(s)	404
Cfr10I	RCCGGY	1 cut(s)	32
Cfr9I	CCCGGG	1 cut(s)	738
CseI	GACGC	3 cut(s)	265, 2147, 2242
CsiI	ACCWGGT	1 cut(s)	156
Csp6I	GTAC	5 cut(s)	1225, 1527, 1717, 2082, 2461
CviQI	GTAC	5 cut(s)	1225, 1527, 1717, 2082, 2461
DraIII	CACNNNGTG	2 cut(s)	160, 2604
EaeI	YGGCCR	2 cut(s)	256, 1983
Eam1104I	CTCTTC	1 cut(s)	375
EarI	CTCTTC	1 cut(s)	375
EciI	GGCGGA	1 cut(s)	1185
Ecl136II	GAGCTC	3 cut(s)	1460, 1555, 2909
Eco130I	CCWWGG	4 cut(s)	960, 1080, 2550, 2714
Eco24I	GRGCYC	4 cut(s)	1462, 1557, 2911, 3030
Eco31I	GGTCTC	3 cut(s)	177, 1510, 1662
Eco47III	AGCGCT	1 cut(s)	403
Eco53kI	GAGCTC	3 cut(s)	1460, 1555, 2909
Eco57I	CTGAAG	2 cut(s)	1844, 2249
Eco81I	CCTNAGG	1 cut(s)	1880
Eco88I	CYCGRG	2 cut(s)	738, 2424
Eco91I	GGTNACC	1 cut(s)	35
EcoICRI	GAGCTC	3 cut(s)	1460, 1555, 2909
EcoO109I	RGGNCCY	2 cut(s)	785, 1432
EcoO65I	GGTNACC	1 cut(s)	35
EcoRI	GAATTC	2 cut(s)	1899, 2786
EcoRII	CCWGG	9 cut(s)	156, 859, 1518, 1624, 2391, 2582, 2607, 2895, 3003
EcoT14I	CCWWGG	4 cut(s)	960, 1080, 2550, 2714
EcoT22I	ATGCAT	3 cut(s)	777, 918, 2346
EcoT38I	GRGCYC	4 cut(s)	1462, 1557, 2911, 3030
ErhI	CCWWGG	4 cut(s)	960, 1080, 2550, 2714
Esp3I	CGTCTC	2 cut(s)	283, 1805
FalI	AAGNNNNNCTT	4 cut(s)	987, 1019, 1367, 1399
FaqI	GGGAC	7 cut(s)	57, 269, 798, 1166, 1303, 1424, 2159
FauI	CCCGC	5 cut(s)	736, 851, 857, 2439, 2851
FauNDI	CATATG	4 cut(s)	777, 895, 1471, 2484
FbaI	TGATCA	2 cut(s)	3, 1144
FblI	GTMKAC	6 cut(s)	87, 216, 869, 1838, 2057, 2809
Fnu4HI	GCNGC	8 cut(s)	419, 636, 639, 642, 762, 840, 1091, 2412
FriOI	GRGCYC	4 cut(s)	1462, 1557, 2911, 3030
Fsp4HI	GCNGC	8 cut(s)	419, 636, 639, 642, 762, 840, 1091, 2412
FspBI	CTAG	6 cut(s)	825, 945, 1362, 2013, 2468, 2633
GlaI	GCGC	1 cut(s)	403
GluI	GCNGC	8 cut(s)	419, 636, 639, 642, 762, 840, 1091, 2412
GsuI	CTGGAG	4 cut(s)	871, 1709, 2605, 2947
HaeII	RGCGCY	1 cut(s)	405
HaeIII	GGCC	5 cut(s)	237, 258, 842, 1985, 2713
HgaI	GACGC	3 cut(s)	265, 2147, 2242
HhaI	GCGC	1 cut(s)	404
Hin1I	GRCGYC	2 cut(s)	276, 2234
Hin6I	GCGC	1 cut(s)	402
HinP1I	GCGC	1 cut(s)	402
HincII	GTYRAC	2 cut(s)	1354, 2810
HindII	GTYRAC	2 cut(s)	1354, 2810
HindIII	AAGCTT	2 cut(s)	1001, 1697
Hpy99I	CGWCG	2 cut(s)	62, 2605
HpyCH4III	ACNGT	6 cut(s)	310, 769, 1979, 2086, 2095, 2875
HpyCH4IV	ACGT	2 cut(s)	168, 2603
HpyF10VI	GCNNNNNNNGC	6 cut(s)	641, 1705, 2656, 2759, 3025, 3034
HpySE526I	ACGT	2 cut(s)	168, 2603
Hsp92I	GRCGYC	2 cut(s)	276, 2234
HspAI	GCGC	1 cut(s)	402
Kpn2I	TCCGGA	1 cut(s)	1462
Ksp22I	TGATCA	2 cut(s)	3, 1144
LguI	GCTCTTC	1 cut(s)	375
LmnI	GCTCC	5 cut(s)	409, 907, 1219, 1465, 1941
Lsp1109I	GCAGC	7 cut(s)	430, 622, 625, 628, 748, 1077, 2398
MabI	ACCWGGT	1 cut(s)	156
MaeI	CTAG	6 cut(s)	825, 945, 1362, 2013, 2468, 2633
MaeII	ACGT	2 cut(s)	168, 2603
MflI	RGATCY	1 cut(s)	949
MhlI	GDGCHC	5 cut(s)	156, 1462, 1557, 2911, 3030
MlsI	TGGCCA	1 cut(s)	1985
MluCI	AATT	7 cut(s)	1099, 1539, 1899, 1930, 2774, 2786, 3082
MluNI	TGGCCA	1 cut(s)	1985
MlyI	GAGTC	6 cut(s)	305, 1029, 1285, 1313, 1844, 2553
MmeI	TCCRAC	4 cut(s)	273, 372, 980, 2860
Mox20I	TGGCCA	1 cut(s)	1985
Mph1103I	ATGCAT	3 cut(s)	777, 918, 2346
MroI	TCCGGA	1 cut(s)	1462
MscI	TGGCCA	1 cut(s)	1985
MseI	TTAA	4 cut(s)	1533, 1580, 3081, 3090
MslI	CAYNNNNRTG	9 cut(s)	206, 770, 965, 1329, 1472, 1604, 2121, 2733, 2769
Msp20I	TGGCCA	1 cut(s)	1985
MspA1I	CMGCKG	1 cut(s)	2541
Mva1269I	GAATGC	1 cut(s)	1324
MvaI	CCWGG	9 cut(s)	158, 861, 1520, 1626, 2393, 2584, 2609, 2897, 3005
MvnI	CGCG	1 cut(s)	2141
MwoI	GCNNNNNNNGC	6 cut(s)	641, 1705, 2656, 2759, 3025, 3034
NcoI	CCATGG	2 cut(s)	960, 2550
NdeI	CATATG	4 cut(s)	777, 895, 1471, 2484
NheI	GCTAGC	1 cut(s)	1361
NlaIV	GGNNCC	7 cut(s)	263, 747, 753, 786, 1061, 2147, 2720
NmeAIII	GCCGAG	1 cut(s)	574
NmuCI	GTSAC	9 cut(s)	35, 169, 359, 967, 1021, 1610, 1853, 2545, 2596
NsiI	ATGCAT	3 cut(s)	777, 918, 2346
NspI	RCATGY	1 cut(s)	2467
NspV	TTCGAA	2 cut(s)	373, 2008
OliI	CACNNNNGTG	1 cut(s)	1472
PaeR7I	CTCGAG	1 cut(s)	2424
PagI	TCATGA	1 cut(s)	25
PaqCI	CACCTGC	1 cut(s)	1733
PasI	CCCWGGG	1 cut(s)	2896
PciSI	GCTCTTC	1 cut(s)	375
PcsI	WCGNNNNNNNCGW	3 cut(s)	2422, 2787, 3046
PctI	GAATGC	1 cut(s)	1324
PflFI	GACNNNGTC	1 cut(s)	1436
PflMI	CCANNNNNTGG	1 cut(s)	3010
PkrI	GCNGC	8 cut(s)	420, 637, 640, 643, 763, 841, 1092, 2413
PleI	GAGTC	6 cut(s)	304, 1028, 1285, 1312, 1843, 2552
PpsI	GAGTC	6 cut(s)	304, 1028, 1285, 1312, 1843, 2552
PpuMI	RGGWCCY	2 cut(s)	785, 1432
Psp124BI	GAGCTC	3 cut(s)	1462, 1557, 2911
Psp5II	RGGWCCY	2 cut(s)	785, 1432
Psp6I	CCWGG	9 cut(s)	156, 859, 1518, 1624, 2391, 2582, 2607, 2895, 3003
PspEI	GGTNACC	1 cut(s)	35
PspGI	CCWGG	9 cut(s)	156, 859, 1518, 1624, 2391, 2582, 2607, 2895, 3003
PspN4I	GGNNCC	7 cut(s)	263, 747, 753, 786, 1061, 2147, 2720
PspPPI	RGGWCCY	2 cut(s)	785, 1432
PstI	CTGCAG	2 cut(s)	1095, 2561
PsuI	RGATCY	1 cut(s)	949
PsyI	GACNNNGTC	1 cut(s)	1436
RsaI	GTAC	5 cut(s)	1226, 1528, 1718, 2083, 2462
RsaNI	GTAC	5 cut(s)	1225, 1527, 1717, 2082, 2461
RseI	CAYNNNNRTG	9 cut(s)	206, 770, 965, 1329, 1472, 1604, 2121, 2733, 2769
SacI	GAGCTC	3 cut(s)	1462, 1557, 2911
SalI	GTCGAC	1 cut(s)	2808
SapI	GCTCTTC	1 cut(s)	375
SaqAI	TTAA	4 cut(s)	1533, 1580, 3081, 3090
SatI	GCNGC	8 cut(s)	419, 636, 639, 642, 762, 840, 1091, 2412
SchI	GAGTC	6 cut(s)	305, 1029, 1285, 1313, 1844, 2553
SduI	GDGCHC	5 cut(s)	156, 1462, 1557, 2911, 3030
SexAI	ACCWGGT	1 cut(s)	156
SfcI	CTRYAG	5 cut(s)	1091, 2289, 2557, 2701, 2943
Sfr274I	CTCGAG	1 cut(s)	2424
SfuI	TTCGAA	2 cut(s)	373, 2008
SlaI	CTCGAG	1 cut(s)	2424
SmaI	CCCGGG	1 cut(s)	740
SmiMI	CAYNNNNRTG	9 cut(s)	206, 770, 965, 1329, 1472, 1604, 2121, 2733, 2769
SmlI	CTYRAG	4 cut(s)	1293, 1507, 2424, 2910
SmoI	CTYRAG	4 cut(s)	1293, 1507, 2424, 2910
SpeI	ACTAGT	1 cut(s)	824
SrfI	GCCCGGGC	1 cut(s)	740
Sse9I	AATT	7 cut(s)	1099, 1539, 1899, 1930, 2774, 2786, 3082
SspMI	CTAG	6 cut(s)	825, 945, 1362, 2013, 2468, 2633
SstI	GAGCTC	3 cut(s)	1462, 1557, 2911
StyI	CCWWGG	4 cut(s)	960, 1080, 2550, 2714
TaaI	ACNGT	6 cut(s)	310, 769, 1979, 2086, 2095, 2875
TaiI	ACGT	2 cut(s)	171, 2606
TasI	AATT	7 cut(s)	1099, 1539, 1899, 1930, 2774, 2786, 3082
TatI	WGTACW	2 cut(s)	2081, 2460
TauI	GCSGC	1 cut(s)	842
Tru1I	TTAA	4 cut(s)	1533, 1580, 3081, 3090
Tru9I	TTAA	4 cut(s)	1533, 1580, 3081, 3090
TscAI	CASTG	8 cut(s)	149, 469, 840, 1226, 1858, 1927, 2445, 3021
TseFI	GTSAC	9 cut(s)	35, 169, 359, 967, 1021, 1610, 1853, 2545, 2596
TseI	GCWGC	7 cut(s)	418, 635, 638, 641, 761, 1090, 2411
Tsp45I	GTSAC	9 cut(s)	35, 169, 359, 967, 1021, 1610, 1853, 2545, 2596
TspGWI	ACGGA	4 cut(s)	130, 271, 743, 1787
TspMI	CCCGGG	1 cut(s)	738
TspRI	CASTG	8 cut(s)	149, 469, 840, 1226, 1858, 1927, 2445, 3021
Tth111I	GACNNNGTC	1 cut(s)	1436
Van91I	CCANNNNNTGG	1 cut(s)	3010
XapI	RAATTY	4 cut(s)	1099, 1899, 1930, 2786
XceI	RCATGY	1 cut(s)	2467
XcmI	CCANNNNNNNNNTGG	1 cut(s)	76
XhoI	CTCGAG	1 cut(s)	2424
XmaI	CCCGGG	1 cut(s)	738
XmiI	GTMKAC	6 cut(s)	87, 216, 869, 1838, 2057, 2809
XspI	CTAG	6 cut(s)	825, 945, 1362, 2013, 2468, 2633
Zsp2I	ATGCAT	3 cut(s)	777, 918, 2346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.