RchiOBHm_Chr7g0228021

Plant phosphoribosyltransferase C-terminal

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
51329454 .. 51333048
3595 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20423

Sequence Viewer

Length: 3123 bp
ATGATCAAACTTATAGTCGAAGTTCATGACGCCGGCGACCTCATGCCCAAAGACAGCGACGGCTTCGCCAGTCCCTTTGTGGAAGTAGACTTCGACCAGCAGAAACAGAGGACACGGACCAAGCCCAAAGACCTCAACCCTCAGTGGAACGAGCACCTGGTGTTCAACGTCACCGACCCAAGAGACCTTCCCAACAAGACCATCGAAGTGGTTGTCTACAATGACAGAAAAGCGGGCCACCACAAGAACTTTCTTGGCCGGGTCCGAATCTCCGGCGTCTCCGTCCCTCTGTCCGAGTCAGAAGCCACGGTGCAGCGTTACCCACTTGACAAAAGGGGCTTGTTTTCCAACATCAAAGGTGACATCGCTCTTCGAATCTATGCGGTTCAGGATTCGGGTAGCGCTCCTCAGTCACAGCAACAGGAATATGGTAATGTTGAAACTGGTACTGCTAGTACCAGTGGCGTAGAGAATCCTCATATATTTTCGCCTCCTCCTCTGCAAGAAATCAATGGTAATACTCATAGGATGATGGATGAGGAAGCGGAGCATCATCACATGGCTGAGAAGATGATGAAGAAGAAGAAGGAACAGGAAGTGAGAACTTTTCACTCTATTGGAACAGGAGGTGCTGCTGCTGCTTCTTTCTCTCATGCTCATCCACCTTCGTCCGGGTTTGGGTTTGAAACCCACCACCAAAAAGCACCCCAAGTTGAAACAAGGACGGATTTCGCCCGGGCGGGTCCGGGTCCGGGTGCTGCCACGGTTATGCAGATGCAGGGACCTCCGAGGCAGAACCCGGAGTATGCGTTGGTGGAGACCAGTCCACCACTGGCGGCCCGCCTCCGGTATAGACCTGGCGGGTATACAGGGGATAAGACCTCCAGCACATATGATTTGGTGGAGCAGATGCATTACTTGTATGTGAGTGTGGTGAAGGCTAGAGATCTTCCAACCATGGATGTGACTGGAAGCCTTGATCCTTATGTGGAAGTGAAGCTTGGGAACTACAAGGGAGTCACGAGGCACTTGGACAAGAATCAAAACCCGGTGTGGAACCAGATTTTCGCTTTCTCCAAGGAGAGGCTGCAGTCGAATTTGGTGGAAGTTACTGTGAAAGACAAGGATGTTTTGAAGGATGATCATGTGGGGAGAGTTTTATTTGATCTCACAGATGTCCCAGTTCGAGTTCCGCCGGATAGTCCTCTTGCTCCTCAGTGGTACAGATTGGAGGACAAGCATGGGGTCAAGGTTAGAGGGGAGATCATGCTTGCTGTTTGGATTGGGACTCAAGCTGATGAGTCATTTTCTGATGCTTGGCATTCTGATGCACATGACATTAGCCATGGCAATCTTGCTAGCACAAGATCAAAGGTTTACTTCTCACCAAAACTATATTATCTTAGAGTTCAAGTTCTTGAAGCTCAGGACCTTGTCCCTTTAGACAGAAGCAGAGCTCCGGACACATATGTGAAGATACAGCTTGGTAATCAGATGAGGGTCTCAAGGCCTTCCCAAGTTCGTACCATTAACCCAATTTGGAATGATGAGCTCATGTTGGTTGCATCTGAGCCATTAACCCAAGAAGTCTTAGTCGTAGCGGTGGGTGACAAGATTGAACCTGGCAAGGATGACCTGTTAGGAATGGTGTATCTTCCGGTTAGAGACCTTCCACAAAGACTGGACCATCATAAGCTTCCTGAGCCTCGCTGGTACAATCTCCAGAAGCCTTCATTGGCAGGTGAACAGGAAAGTGAGAAAAAGAAAGAGAAGTTTTCGAGCAAGATTCATCTCCGTCTCTGTTTGGATGCAGGGTATCATGTTCTTGATGAGTCTACACATTTTAGCAGTGACCTTCAGCCTTCCTCCAAGCACCTGAGGAAAGCAAACATTGGAATTCTGGAACTTGGGATTCTCAGTGCCAAGAATTTGCTCCCTATGAAGGGTAGGGAGGGTAGGACTACTGATTCATACTGTGTGGCCAAGTATGGGAACAAATGGATTCGAACTAGAACACTTCTCAACACTCTGAACCCTCGCTGGAATGAGCAGTATACTTGGGAAGTGTATGACCCATGTACTGTCATCACCGTTGGTGTTTTCGACAATCATCATATCAATGGAAGCCATGAAGACTCGAGGGACCAGAGGATTGGGAAGGTAAGAATCAGGTTGTCCACTTTAGAAACTGATCGGATTTATACACATTACTATCCCCTGTTGGTTTTGACGCCCTCTGGTTTGAAAAAGCATGGAGAACTTCAGTTGGCATTGAGGTTCAGTTCTACAGCTTGGGTCAATATGGTTGCTCAATATGGAAGACCATTGCTTCCAAAGATGCATTATATCAATCCTATACCTGTTAGGTATGTTGATTGGCTTCGCCACCAGGCAATGCAGATTGTGGCTGCACGACTATCTCGAGCAGAGCCACCACTGAGGCGGGAGGCTGTTGAGTACATGCTAGATGTAGATTACCATATGTTTAGTCTGAGGAGAAGCAAAGCCAACTTCTACCGTATCATGTCAGTTCTCAGCGGAGTCACCATGGTCTGCAGATGGTTCAATGACATTTGCACCTGGAGAAACCCCGTCACGACGTGCCTGGTGCATGTTTTGTTCGTGATTCTAGTTTGCTACCCAGAGCTGATCCTGCCAACAATCTTCCTCTACCTCTTTGTGATTGGTTTATGGAACTATAGGTTCAGGCCAAGGCACCCACCTCACATGGATGCTCGGATTTCACAGGCAGAGTTTGCACACCCGGATGAATTGGACGAGGAATTCGACAGCTTCCCCACAAGTCGACCCTCGGACATTGTGAGAATGAGGTATGACAGGTTGCGTAGCGTGGCGGGTAGAGTGCAAACTGTGGTTGGAGATTTGGCAACCCAGGGGGAAAGAGCTCAAGCACTACTAAGCTGGAGGGATTCAAGGGCTACAGCAATCTTCATCATCTTCTCGTTGATCTGGGCAGTTTTCATATACATTACTCCCTTCCAGGTTGTGGCAGTGCTGATTGGGCTCTATATGCTACGGCATCCACGATTCCGAAGCAAGATGCCTTCTGCACCTGTTAATTTCTTCAAGAGATTGCCATCAAAGTCGGATATGATGCTATGA

Protein Analysis

1040

Amino Acids

118.83

Weight (kDa)

8.91

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 3 - 106 5.1e-21 C2 domain
C2 PF00168 306 - 410 6.7e-22 C2 domain
C2 PF00168 467 - 573 4.5e-17 C2 domain
C2 PF00168 632 - 740 6.3e-22 C2 domain
PRT_C PF08372 885 - 1040 5.5e-80 Plant phosphoribosyltransferase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015110)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22610
fragaria_vesca FvH4_5g32020
malus_domestica MD08G1219200.v1.1 MD15G1407800.v1.1
prunus_persica Prupe.1G553800_v2.0.a1
pyrus_communis pycom08g19020 pycom15g36390
rosa_chinensis RchiOBHm_Chr7g0228021
rosa_laevigata RLG00000001595
rosa_multiflora Rmu_sc0004858.1_g000016
rosa_rugosa Rorug07G0245300
rosa_samantha Rh7AG399300 Rh7BG380700 Rh7CG417200 Rh7DG394800
rosa_wichuraiana Rw7G033170

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1730
Acc36I ACCTGC 1 cut(s) 1730
AccB1I GGYRCC 1 cut(s) 2715
AccB7I CCANNNNNTGG 1 cut(s) 3007
AccI GTMKAC 6 cut(s) 87, 216, 866, 1835, 2054, 2806
AccIII TCCGGA 1 cut(s) 1459
AclWI GGATC 2 cut(s) 974, 2644
AcoI YGGCCR 2 cut(s) 256, 1980
AcsI RAATTY 4 cut(s) 1096, 1896, 1927, 2783
AcuI CTGAAG 2 cut(s) 1841, 2246
AcyI GRCGYC 3 cut(s) 30, 276, 2231
AdeI CACNNNGTG 2 cut(s) 160, 2601
AfaI GTAC 7 cut(s) 448, 457, 1223, 1525, 1715, 2080, 2459
AfeI AGCGCT 1 cut(s) 403
AfiI CCNNNNNNNGG 9 cut(s) 671, 678, 752, 846, 1083, 1942, 1943, 1989, 3007
AjiI CACGTC 1 cut(s) 2601
AjnI CCWGG 8 cut(s) 156, 856, 1621, 2388, 2579, 2604, 2892, 3000
AjuI GAANNNNNNNTTGG 4 cut(s) 984, 1016, 1718, 1750
AleI CACNNNNGTG 1 cut(s) 1469
Alw21I GWGCWC 4 cut(s) 156, 1459, 1554, 2908
Alw26I GTCTC 6 cut(s) 177, 283, 812, 1507, 1659, 1802
AlwI GGATC 2 cut(s) 974, 2644
Ama87I CYCGRG 3 cut(s) 735, 2137, 2421
Aor13HI TCCGGA 1 cut(s) 1459
Aor51HI AGCGCT 1 cut(s) 403
AoxI GGCC 6 cut(s) 235, 256, 837, 1508, 1980, 2708
ApeKI GCWGC 7 cut(s) 313, 632, 635, 638, 758, 1087, 2408
ApoI RAATTY 4 cut(s) 1096, 1896, 1927, 2783
ArsI GACNNNNNNTTYG 5 cut(s) 32, 198, 230, 2768, 2800
AspLEI GCGC 1 cut(s) 404
AsuC2I CCSGG 9 cut(s) 260, 673, 736, 737, 747, 753, 800, 1049, 2765
AsuHPI GGTGA 8 cut(s) 163, 371, 946, 1377, 1619, 1754, 2080, 2536
AsuII TTCGAA 2 cut(s) 373, 2005
AsuNHI GCTAGC 1 cut(s) 1358
AvaI CYCGRG 3 cut(s) 735, 2137, 2421
AvaII GGWCC 8 cut(s) 117, 262, 743, 749, 782, 1429, 1684, 2143
AxyI CCTNAGG 1 cut(s) 1877
BalI TGGCCA 1 cut(s) 1982
BanI GGYRCC 1 cut(s) 2715
BanII GRGCYC 4 cut(s) 1459, 1554, 2908, 3027
BauI CACGAG 1 cut(s) 1021
BbsI GAAGAC 2 cut(s) 2139, 2326
Bbv12I GWGCWC 4 cut(s) 156, 1459, 1554, 2908
BbvI GCAGC 7 cut(s) 325, 619, 622, 625, 745, 1074, 2395
BccI CCATC 5 cut(s) 209, 526, 1695, 2553, 3106
BceAI ACGGC 2 cut(s) 76, 3053
BciT130I CCWGG 8 cut(s) 158, 858, 1623, 2390, 2581, 2606, 2894, 3002
BclI TGATCA 2 cut(s) 3, 1141
BcnI CCSGG 9 cut(s) 260, 673, 736, 737, 747, 753, 800, 1049, 2765
BcoDI GTCTC 6 cut(s) 177, 283, 812, 1507, 1659, 1802
BfaI CTAG 6 cut(s) 453, 942, 1359, 2010, 2465, 2630
BfmI CTRYAG 5 cut(s) 1088, 2286, 2554, 2698, 2940
BfoI RGCGCY 1 cut(s) 405
BfuAI ACCTGC 1 cut(s) 1730
BglII AGATCT 1 cut(s) 946
BisI GCNGC 8 cut(s) 314, 633, 636, 639, 759, 837, 1088, 2409
BlsI GCNGC 8 cut(s) 315, 634, 637, 640, 760, 838, 1089, 2410
Bme18I GGWCC 8 cut(s) 117, 262, 743, 749, 782, 1429, 1684, 2143
BmeT110I CYCGRG 3 cut(s) 735, 2137, 2421
BmgBI CACGTC 1 cut(s) 2601
BmiI GGNNCC 7 cut(s) 263, 744, 750, 783, 1058, 2144, 2717
BmrI ACTGGG 1 cut(s) 1175
BmtI GCTAGC 1 cut(s) 1362
BmuI ACTGGG 1 cut(s) 1175
BpiI GAAGAC 2 cut(s) 2139, 2326
BpmI CTGGAG 4 cut(s) 868, 1706, 2602, 2944
Bpu10I CCTNAGC 2 cut(s) 1425, 1701
Bpu14I TTCGAA 2 cut(s) 373, 2005
BpuEI CTTGAG 3 cut(s) 1275, 1489, 2892
BpuMI CCSGG 9 cut(s) 260, 673, 736, 737, 747, 753, 800, 1049, 2765
BsaBI GATNNNNATC 1 cut(s) 3097
BsaHI GRCGYC 3 cut(s) 30, 276, 2231
BsaI GGTCTC 4 cut(s) 177, 812, 1507, 1659
BsaWI WCCGGW 3 cut(s) 846, 1459, 1657
BsaXI ACNNNNNCTCC 2 cut(s) 794, 824
Bsc4I CCNNNNNNNGG 9 cut(s) 671, 678, 752, 846, 1083, 1942, 1943, 1989, 3007
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 8 cut(s) 69, 448, 459, 822, 837, 973, 1181, 1686
Bse21I CCTNAGG 1 cut(s) 1877
Bse3DI GCAATG 2 cut(s) 2324, 2400
Bse8I GATNNNNATC 1 cut(s) 3097
BseAI TCCGGA 1 cut(s) 1459
BseBI CCWGG 8 cut(s) 158, 858, 1623, 2390, 2581, 2606, 2894, 3002
BseJI GATNNNNATC 1 cut(s) 3097
BseLI CCNNNNNNNGG 9 cut(s) 671, 678, 752, 846, 1083, 1942, 1943, 1989, 3007
BseMI GCAATG 2 cut(s) 2324, 2400
BseNI ACTGG 8 cut(s) 69, 448, 459, 822, 837, 973, 1181, 1686
BseRI GAGGAG 5 cut(s) 396, 483, 486, 1203, 2509
BseXI GCAGC 7 cut(s) 325, 619, 622, 625, 745, 1074, 2395
BsgI GTGCAG 3 cut(s) 332, 2394, 3054
BshFI GGCC 6 cut(s) 237, 258, 839, 1510, 1982, 2710
BshNI GGYRCC 1 cut(s) 2715
BsiHKAI GWGCWC 4 cut(s) 156, 1459, 1554, 2908
BsiHKCI CYCGRG 3 cut(s) 735, 2137, 2421
BslFI GGGAC 7 cut(s) 57, 269, 795, 1163, 1300, 1421, 2156
BslI CCNNNNNNNGG 9 cut(s) 671, 678, 752, 846, 1083, 1942, 1943, 1989, 3007
BsmAI GTCTC 6 cut(s) 177, 283, 812, 1507, 1659, 1802
BsmBI CGTCTC 2 cut(s) 283, 1802
BsmFI GGGAC 7 cut(s) 57, 269, 795, 1163, 1300, 1421, 2156
BsmI GAATGC 1 cut(s) 1321
BsnI GGCC 6 cut(s) 237, 258, 839, 1510, 1982, 2710
Bso31I GGTCTC 4 cut(s) 177, 812, 1507, 1659
BsoBI CYCGRG 3 cut(s) 735, 2137, 2421
Bsp119I TTCGAA 2 cut(s) 373, 2005
Bsp1286I GDGCHC 5 cut(s) 156, 1459, 1554, 2908, 3027
Bsp13I TCCGGA 1 cut(s) 1459
Bsp19I CCATGG 3 cut(s) 957, 1345, 2547
BspANI GGCC 6 cut(s) 237, 258, 839, 1510, 1982, 2710
BspEI TCCGGA 1 cut(s) 1459
BspHI TCATGA 1 cut(s) 25
BspLI GGNNCC 7 cut(s) 263, 744, 750, 783, 1058, 2144, 2717
BspMAI CTGCAG 2 cut(s) 1092, 2558
BspMI ACCTGC 1 cut(s) 1730
BspOI GCTAGC 1 cut(s) 1362
BspPI GGATC 2 cut(s) 974, 2644
BspQI GCTCTTC 1 cut(s) 375
BspT104I TTCGAA 2 cut(s) 373, 2005
BspT107I GGYRCC 1 cut(s) 2715
BspTNI GGTCTC 4 cut(s) 177, 812, 1507, 1659
BsrDI GCAATG 2 cut(s) 2324, 2400
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 8 cut(s) 69, 448, 459, 822, 837, 973, 1181, 1686
BssAI RCCGGY 1 cut(s) 32
BssNAI GTATAC 2 cut(s) 867, 2055
BssNI GRCGYC 3 cut(s) 30, 276, 2231
BssSI CACGAG 1 cut(s) 1021
BssT1I CCWWGG 5 cut(s) 957, 1077, 1345, 2547, 2711
Bst1107I GTATAC 2 cut(s) 867, 2055
Bst2BI CACGAG 1 cut(s) 1021
Bst2UI CCWGG 8 cut(s) 158, 858, 1623, 2390, 2581, 2606, 2894, 3002
Bst4CI ACNGT 8 cut(s) 310, 766, 1114, 1976, 2083, 2092, 2519, 2872
Bst6I CTCTTC 1 cut(s) 375
BstACI GRCGYC 3 cut(s) 30, 276, 2231
BstAPI GCANNNNNTGC 1 cut(s) 2756
BstBI TTCGAA 2 cut(s) 373, 2005
BstC8I GCNNGC 5 cut(s) 34, 235, 841, 1272, 1360
BstDSI CCRYGG 5 cut(s) 306, 762, 957, 1345, 2547
BstH2I RGCGCY 1 cut(s) 405
BstHHI GCGC 1 cut(s) 404
BstMAI GTCTC 6 cut(s) 177, 283, 812, 1507, 1659, 1802
BstMWI GCNNNNNNNGC 6 cut(s) 638, 1702, 2653, 2756, 3022, 3031
BstNI CCWGG 8 cut(s) 158, 858, 1623, 2390, 2581, 2606, 2894, 3002
BstNSI RCATGY 2 cut(s) 2464, 2615
BstSFI CTRYAG 5 cut(s) 1088, 2286, 2554, 2698, 2940
BstV1I GCAGC 7 cut(s) 325, 619, 622, 625, 745, 1074, 2395
BstV2I GAAGAC 2 cut(s) 2139, 2326
BstX2I RGATCY 1 cut(s) 946
BstXI CCANNNNNNTGG 2 cut(s) 208, 2153
BstYI RGATCY 1 cut(s) 946
BstZ17I GTATAC 2 cut(s) 867, 2055
Bsu36I CCTNAGG 1 cut(s) 1877
BsuRI GGCC 6 cut(s) 237, 258, 839, 1510, 1982, 2710
BtgI CCRYGG 5 cut(s) 306, 762, 957, 1345, 2547
BtgZI GCGATG 1 cut(s) 349
BtrI CACGTC 1 cut(s) 2601
BtsI GCAGTG 2 cut(s) 1855, 3018
BtsIMutI CAGTG 8 cut(s) 149, 466, 830, 1223, 1855, 1924, 2435, 3018
BveI ACCTGC 1 cut(s) 1730
Cac8I GCNNGC 5 cut(s) 34, 235, 841, 1272, 1360
CciI TCATGA 1 cut(s) 25
CfoI GCGC 1 cut(s) 404
Cfr10I RCCGGY 1 cut(s) 32
Cfr9I CCCGGG 1 cut(s) 735
CseI GACGC 3 cut(s) 38, 265, 2239
CsiI ACCWGGT 1 cut(s) 156
Csp6I GTAC 7 cut(s) 447, 456, 1222, 1524, 1714, 2079, 2458
CviQI GTAC 7 cut(s) 447, 456, 1222, 1524, 1714, 2079, 2458
DraIII CACNNNGTG 2 cut(s) 160, 2601
EaeI YGGCCR 2 cut(s) 256, 1980
Eam1104I CTCTTC 1 cut(s) 375
EarI CTCTTC 1 cut(s) 375
EciI GGCGGA 1 cut(s) 1182
Ecl136II GAGCTC 3 cut(s) 1457, 1552, 2906
Eco130I CCWWGG 5 cut(s) 957, 1077, 1345, 2547, 2711
Eco147I AGGCCT 1 cut(s) 1510
Eco24I GRGCYC 4 cut(s) 1459, 1554, 2908, 3027
Eco31I GGTCTC 4 cut(s) 177, 812, 1507, 1659
Eco47I GGWCC 8 cut(s) 117, 262, 743, 749, 782, 1429, 1684, 2143
Eco47III AGCGCT 1 cut(s) 403
Eco53kI GAGCTC 3 cut(s) 1457, 1552, 2906
Eco57I CTGAAG 2 cut(s) 1841, 2246
Eco81I CCTNAGG 1 cut(s) 1877
Eco88I CYCGRG 3 cut(s) 735, 2137, 2421
EcoICRI GAGCTC 3 cut(s) 1457, 1552, 2906
EcoO109I RGGNCCY 2 cut(s) 782, 1429
EcoRI GAATTC 2 cut(s) 1896, 2783
EcoRII CCWGG 8 cut(s) 156, 856, 1621, 2388, 2579, 2604, 2892, 3000
EcoT14I CCWWGG 5 cut(s) 957, 1077, 1345, 2547, 2711
EcoT22I ATGCAT 2 cut(s) 915, 2343
EcoT38I GRGCYC 4 cut(s) 1459, 1554, 2908, 3027
ErhI CCWWGG 5 cut(s) 957, 1077, 1345, 2547, 2711
Esp3I CGTCTC 2 cut(s) 283, 1802
FalI AAGNNNNNCTT 4 cut(s) 984, 1016, 1364, 1396
FaqI GGGAC 7 cut(s) 57, 269, 795, 1163, 1300, 1421, 2156
FauI CCCGC 6 cut(s) 226, 733, 848, 854, 2436, 2848
FauNDI CATATG 3 cut(s) 892, 1468, 2481
FbaI TGATCA 2 cut(s) 3, 1141
FblI GTMKAC 6 cut(s) 87, 216, 866, 1835, 2054, 2806
Fnu4HI GCNGC 8 cut(s) 314, 633, 636, 639, 759, 837, 1088, 2409
FriOI GRGCYC 4 cut(s) 1459, 1554, 2908, 3027
Fsp4HI GCNGC 8 cut(s) 314, 633, 636, 639, 759, 837, 1088, 2409
FspBI CTAG 6 cut(s) 453, 942, 1359, 2010, 2465, 2630
GlaI GCGC 1 cut(s) 403
GluI GCNGC 8 cut(s) 314, 633, 636, 639, 759, 837, 1088, 2409
GsuI CTGGAG 4 cut(s) 868, 1706, 2602, 2944
HaeII RGCGCY 1 cut(s) 405
HaeIII GGCC 6 cut(s) 237, 258, 839, 1510, 1982, 2710
HgaI GACGC 3 cut(s) 38, 265, 2239
HhaI GCGC 1 cut(s) 404
Hin1I GRCGYC 3 cut(s) 30, 276, 2231
Hin6I GCGC 1 cut(s) 402
HinP1I GCGC 1 cut(s) 402
HincII GTYRAC 1 cut(s) 2807
HindII GTYRAC 1 cut(s) 2807
HindIII AAGCTT 2 cut(s) 998, 1694
HphI GGTGA 8 cut(s) 163, 371, 946, 1377, 1619, 1754, 2080, 2536
Hpy99I CGWCG 2 cut(s) 62, 2602
HpyCH4III ACNGT 8 cut(s) 310, 766, 1114, 1976, 2083, 2092, 2519, 2872
HpyCH4IV ACGT 2 cut(s) 168, 2600
HpyF10VI GCNNNNNNNGC 6 cut(s) 638, 1702, 2653, 2756, 3022, 3031
HpySE526I ACGT 2 cut(s) 168, 2600
Hsp92I GRCGYC 3 cut(s) 30, 276, 2231
HspAI GCGC 1 cut(s) 402
Kpn2I TCCGGA 1 cut(s) 1459
KroI GCCGGC 1 cut(s) 32
KroNI GCCGGC 1 cut(s) 34
Ksp22I TGATCA 2 cut(s) 3, 1141
LguI GCTCTTC 1 cut(s) 375
LmnI GCTCC 6 cut(s) 409, 547, 904, 1216, 1462, 1938
Lsp1109I GCAGC 7 cut(s) 325, 619, 622, 625, 745, 1074, 2395
MabI ACCWGGT 1 cut(s) 156
MaeI CTAG 6 cut(s) 453, 942, 1359, 2010, 2465, 2630
MaeII ACGT 2 cut(s) 168, 2600
MflI RGATCY 1 cut(s) 946
MhlI GDGCHC 5 cut(s) 156, 1459, 1554, 2908, 3027
MlsI TGGCCA 1 cut(s) 1982
MluCI AATT 7 cut(s) 1096, 1536, 1896, 1927, 2771, 2783, 3079
MluNI TGGCCA 1 cut(s) 1982
MlyI GAGTC 7 cut(s) 305, 1026, 1282, 1310, 1841, 2129, 2550
MmeI TCCRAC 4 cut(s) 372, 977, 2857, 3087
Mox20I TGGCCA 1 cut(s) 1982
Mph1103I ATGCAT 2 cut(s) 915, 2343
MreI CGCCGGCG 1 cut(s) 32
MroI TCCGGA 1 cut(s) 1459
MroNI GCCGGC 1 cut(s) 32
MscI TGGCCA 1 cut(s) 1982
MseI TTAA 3 cut(s) 1530, 1577, 3078
MslI CAYNNNNRTG 8 cut(s) 206, 767, 962, 1326, 1469, 2118, 2730, 2766
Msp20I TGGCCA 1 cut(s) 1982
MspA1I CMGCKG 1 cut(s) 2538
Mva1269I GAATGC 1 cut(s) 1321
MvaI CCWGG 8 cut(s) 158, 858, 1623, 2390, 2581, 2606, 2894, 3002
MwoI GCNNNNNNNGC 6 cut(s) 638, 1702, 2653, 2756, 3022, 3031
NaeI GCCGGC 1 cut(s) 34
NciI CCSGG 9 cut(s) 260, 673, 736, 737, 747, 753, 800, 1049, 2765
NcoI CCATGG 3 cut(s) 957, 1345, 2547
NdeI CATATG 3 cut(s) 892, 1468, 2481
NgoMIV GCCGGC 1 cut(s) 32
NheI GCTAGC 1 cut(s) 1358
NlaIV GGNNCC 7 cut(s) 263, 744, 750, 783, 1058, 2144, 2717
NmuCI GTSAC 9 cut(s) 169, 359, 411, 964, 1018, 1607, 1850, 2542, 2593
NsiI ATGCAT 2 cut(s) 915, 2343
NspI RCATGY 2 cut(s) 2464, 2615
NspV TTCGAA 2 cut(s) 373, 2005
OliI CACNNNNGTG 1 cut(s) 1469
PaeR7I CTCGAG 2 cut(s) 2137, 2421
PagI TCATGA 1 cut(s) 25
PaqCI CACCTGC 1 cut(s) 1730
PasI CCCWGGG 1 cut(s) 2893
PceI AGGCCT 1 cut(s) 1510
PciSI GCTCTTC 1 cut(s) 375
PcsI WCGNNNNNNNCGW 3 cut(s) 2419, 2784, 3043
PctI GAATGC 1 cut(s) 1321
PdiI GCCGGC 1 cut(s) 34
PflFI GACNNNGTC 1 cut(s) 1433
PflMI CCANNNNNTGG 1 cut(s) 3007
PkrI GCNGC 8 cut(s) 315, 634, 637, 640, 760, 838, 1089, 2410
PleI GAGTC 7 cut(s) 304, 1025, 1282, 1309, 1840, 2129, 2549
PpsI GAGTC 7 cut(s) 304, 1025, 1282, 1309, 1840, 2129, 2549
PpuMI RGGWCCY 2 cut(s) 782, 1429
Psp124BI GAGCTC 3 cut(s) 1459, 1554, 2908
Psp5II RGGWCCY 2 cut(s) 782, 1429
Psp6I CCWGG 8 cut(s) 156, 856, 1621, 2388, 2579, 2604, 2892, 3000
PspGI CCWGG 8 cut(s) 156, 856, 1621, 2388, 2579, 2604, 2892, 3000
PspN4I GGNNCC 7 cut(s) 263, 744, 750, 783, 1058, 2144, 2717
PspPPI RGGWCCY 2 cut(s) 782, 1429
PspXI VCTCGAGB 1 cut(s) 2137
PstI CTGCAG 2 cut(s) 1092, 2558
PsuI RGATCY 1 cut(s) 946
PsyI GACNNNGTC 1 cut(s) 1433
RsaI GTAC 7 cut(s) 448, 457, 1223, 1525, 1715, 2080, 2459
RsaNI GTAC 7 cut(s) 447, 456, 1222, 1524, 1714, 2079, 2458
RseI CAYNNNNRTG 8 cut(s) 206, 767, 962, 1326, 1469, 2118, 2730, 2766
SacI GAGCTC 3 cut(s) 1459, 1554, 2908
SalI GTCGAC 1 cut(s) 2805
SapI GCTCTTC 1 cut(s) 375
SaqAI TTAA 3 cut(s) 1530, 1577, 3078
SatI GCNGC 8 cut(s) 314, 633, 636, 639, 759, 837, 1088, 2409
SchI GAGTC 7 cut(s) 305, 1026, 1282, 1310, 1841, 2129, 2550
SduI GDGCHC 5 cut(s) 156, 1459, 1554, 2908, 3027
SexAI ACCWGGT 1 cut(s) 156
SfcI CTRYAG 5 cut(s) 1088, 2286, 2554, 2698, 2940
Sfr274I CTCGAG 2 cut(s) 2137, 2421
SfuI TTCGAA 2 cut(s) 373, 2005
SgrAI CRCCGGYG 1 cut(s) 32
SinI GGWCC 8 cut(s) 117, 262, 743, 749, 782, 1429, 1684, 2143
SlaI CTCGAG 2 cut(s) 2137, 2421
SmaI CCCGGG 1 cut(s) 737
SmiMI CAYNNNNRTG 8 cut(s) 206, 767, 962, 1326, 1469, 2118, 2730, 2766
SmlI CTYRAG 5 cut(s) 1290, 1504, 2137, 2421, 2907
SmoI CTYRAG 5 cut(s) 1290, 1504, 2137, 2421, 2907
SrfI GCCCGGGC 1 cut(s) 737
Sse9I AATT 7 cut(s) 1096, 1536, 1896, 1927, 2771, 2783, 3079
SseBI AGGCCT 1 cut(s) 1510
SspMI CTAG 6 cut(s) 453, 942, 1359, 2010, 2465, 2630
SstI GAGCTC 3 cut(s) 1459, 1554, 2908
StuI AGGCCT 1 cut(s) 1510
StyI CCWWGG 5 cut(s) 957, 1077, 1345, 2547, 2711
TaaI ACNGT 8 cut(s) 310, 766, 1114, 1976, 2083, 2092, 2519, 2872
TaiI ACGT 2 cut(s) 171, 2603
TasI AATT 7 cut(s) 1096, 1536, 1896, 1927, 2771, 2783, 3079
TatI WGTACW 2 cut(s) 2078, 2457
TauI GCSGC 1 cut(s) 839
Tru1I TTAA 3 cut(s) 1530, 1577, 3078
Tru9I TTAA 3 cut(s) 1530, 1577, 3078
TscAI CASTG 8 cut(s) 149, 466, 837, 1223, 1855, 1924, 2442, 3018
TseFI GTSAC 9 cut(s) 169, 359, 411, 964, 1018, 1607, 1850, 2542, 2593
TseI GCWGC 7 cut(s) 313, 632, 635, 638, 758, 1087, 2408
Tsp45I GTSAC 9 cut(s) 169, 359, 411, 964, 1018, 1607, 1850, 2542, 2593
TspGWI ACGGA 4 cut(s) 130, 271, 740, 1784
TspMI CCCGGG 1 cut(s) 735
TspRI CASTG 8 cut(s) 149, 466, 837, 1223, 1855, 1924, 2442, 3018
Tth111I GACNNNGTC 1 cut(s) 1433
Van91I CCANNNNNTGG 1 cut(s) 3007
VpaK11BI GGWCC 8 cut(s) 117, 262, 743, 749, 782, 1429, 1684, 2143
XapI RAATTY 4 cut(s) 1096, 1896, 1927, 2783
XceI RCATGY 2 cut(s) 2464, 2615
XcmI CCANNNNNNNNNTGG 2 cut(s) 76, 829
XhoI CTCGAG 2 cut(s) 2137, 2421
XmaI CCCGGG 1 cut(s) 735
XmiI GTMKAC 6 cut(s) 87, 216, 866, 1835, 2054, 2806
XspI CTAG 6 cut(s) 453, 942, 1359, 2010, 2465, 2630
Zsp2I ATGCAT 2 cut(s) 915, 2343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.