Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0015220

Physical Location & Seq

Genomic Coordinates Reverse (-)

556313 .. 558773

Gene Structure 2461 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1008000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGAAAGCCTCGTCGGCAACGGAGCTAGCCAGTCGAATAAGCCGGGTTCTGATCTCCGCTTCCAACCACACAAGGCCGACTCGCTCATGGGATCCTTCTCTCGAGACCATTCTTCACCGCCTCGGTTGCCGCGACTCACTGAGCCCCTCACTCGTGGCCCGAGTTATCGACCCCTTCCTCCTCAACCACTACTCGCTCGCTCTCGGCTTCTTCAACTGGGCTTCCCAGCAACCTTCCTTCTCCCACACATCCCTCACCTTCCGATCAGTCCTCAAGTCGCTCTCTTTTTCCCGCCAATTCAACTCCATTGATGCTCTCCTCAAGCAAATCAAAGTCCAGAAGATCAGCCTCGATGCTTCGGTTTATCGATCCGTAATTGCTTCATTTATCATTGCAAAGAAAACCCACAACGCTTTTTTGGTCTTCAGTGAGGTTTCCTCCCTAATTGGAGATATTGGGCATGAGATTTGTAACTCATTGTTGGCTGCGCTAGCTTCAGATGGATATTTTGAGTATGCCCAGAAGGTGTTTGATGAAATGACTCTTAAAGCTGTCCCCTTGAGCACAGTTGGTTTTGGTGTTTTTATATGGAGACATTGTGGAAATGCTGAATTGGGTAAAATTTTGAGCATGTTAGATGAGGTTAGGAGAGGTGGTTCGGAGATTAACGGCTCCGTTATAGCTCTTTTGGTTGTTCACGGTCTTTGTCAGGCTTCTAGAGTATCAGAGGCTTTTTGGGTATTGGATGAGCTGAGGAGTAGAGAGTGCAAACCTGATTTCATGGCGTATAGGATTGTCGCCGAAGCACTTCGGTTAACTGGGGACGTAGTTGGTACCGAAAAGGTTTTGAAGAAGAAGAGAAAGCTAGGTGTAGCTCCTAGGACTAATGATTATAGAGGGTTCATATTTGATTTGATTTCAGAGAGGCGGATATGTGAAGCAAAAGAGTTGGGAGAAGTGATTGTTAGCGGGAATTTTCCGATTGACGATGATGTTCTCAATGTCTTGATAGGATCAGTGTCGGCAATTGATCCTGGCTCGGCGTTAGTGTTCTTCAAATTCATGGTTGGAAAAGAGAGGTTCCCAACTCTTTTGACTTTGAGCAATTTGAGTAGGAATCTGTGTAAGCATGACAAAAGTGATGACTTGCTGGAAGTCTTTCGAGTTCTATCATCCGGCGGCTATTTCAGAGATTTGGAGACTTACAATGTGATGGTGTCGTTCTTGTGCAGAGCAGGGATGGTGAAAGAAGCCTATGGCGCTCTTCAGGAGATGAGGAAAAATGGGTTAGGCCCGGACATTTTGACTTACAATTCTCTTATTGAAGCATGCTGTAGGGAGGATCTGTTGAGGCCTGCTAAAAGGCTATGGGACGAGATGTTTGCAACTGGGTGCAACGGAAACTTGAAGACTTACAATATCCTAATACATAAGTTTTCGGAAGTAGGCCAGGTAGACGAGGCTCAGAGGCTCCTTTACCACATGCTGGGTAAAGGGGTTGCACCAGACACGATGACTTACATTTCTCTACTTGAAGGGCTTTGCCAAGAAAAGAAGGTTGAAGCCGCTTTCGACGTTTTTAACAAGTCTGTTCAACAGGATATGATGCTTGCACAGACTGTGTTGGGTGCATTTACTCATTCTTTGTGCAAAACAGGTCTTTTTCTTGCTGCTTCTAAGTTACTCTGCGGCATCAGCCATGATGTAACACAGTCCGATTCCCATGTAACTTTGCTGAAGTATTTAGCTGACGCCGAAGAGATTCCGGTTGCCATTGAACACATTAAATGGGTTCGACAAACCGCACCCTCGATGTTGCAAATTATATCAGCTGAACTTTTAGCATCCCTGTCTTCTTCTTCGAGACCAGAGCCAACTCTGCAGTTACTTCAAACAATCCGGGAAATATCAGGTCTCAAACAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MNE1 PPR PPR_2 PPR_3

Protein Analysis

642

Amino Acids

71.16

Weight (kDa)

7.87

Isoelectric Point (pI)

35.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_1	PF12854	394 - 426	4.4e-07	PPR repeat
PPR_2	PF13041	398 - 446	1e-13	PPR repeat family
PPR_3	PF13812	398 - 444	3.2e-06	Pentatricopeptide repeat domain
PPR	PF01535	401 - 430	1.1e-06	PPR repeat
PPR_long	PF17177	415 - 542	6.6e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	428 - 460	5.8e-08	PPR repeat
PPR_2	PF13041	432 - 479	2.3e-12	PPR repeat family
PPR_2	PF13041	470 - 516	3.4e-11	PPR repeat family
PPR_1	PF12854	498 - 529	1.3e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015220)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14080
fragaria_vesca	FvH4_6g53850
malus_domestica	MD09G1008000.v1.1
prunus_persica	Prupe.3G308900_v2.0.a1 Prupe.3G308900_v2.0.a1
pyrus_communis	pycom111g00640
rosa_chinensis	RchiOBHm_Chr2g0175991
rosa_laevigata	RLG00000022371
rosa_multiflora	Rmu_sc0012513.1_g000006
rosa_roxburghii	Rroxscaffold_2G00076880
rosa_rugosa	Rorug02G0589200
rosa_samantha	Rh2AG668400 Rh2BG679900 Rh2CG642800 Rh2DG693600
rosa_wichuraiana	Rw2G054800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	833
AccB1I	GGYRCC	1 cut(s)	833
AccB7I	CCANNNNNTGG	1 cut(s)	1486
AccI	GTMKAC	1 cut(s)	1455
AccII	CGCG	1 cut(s)	132
AclWI	GGATC	6 cut(s)	86, 99, 363, 1021, 1025, 1350
AcsI	RAATTY	3 cut(s)	621, 973, 1058
AcuI	CTGAAG	4 cut(s)	409, 480, 1250, 1757
AcyI	GRCGYC	1 cut(s)	1752
AfaI	GTAC	1 cut(s)	835
AfiI	CCNNNNNNNGG	1 cut(s)	1486
AjnI	CCWGG	2 cut(s)	1033, 1449
AloI	GAACNNNNNNTCC	2 cut(s)	640, 672
AluBI	AGCT	9 cut(s)	25, 494, 551, 683, 751, 865, 875, 1748, 1832
AluI	AGCT	9 cut(s)	25, 494, 551, 683, 751, 865, 875, 1748, 1832
Alw21I	GWGCWC	1 cut(s)	566
Alw26I	GTCTC	5 cut(s)	98, 586, 1193, 1858, 1919
AlwI	GGATC	6 cut(s)	86, 99, 363, 1021, 1025, 1350
Ama87I	CYCGRG	2 cut(s)	101, 159
AoxI	GGCC	5 cut(s)	74, 156, 1291, 1352, 1447
ApeKI	GCWGC	2 cut(s)	485, 1670
ApoI	RAATTY	3 cut(s)	621, 973, 1058
ArsI	GACNNNNNNTTYG	2 cut(s)	1364, 1396
Asp700I	GAANNNNTTC	3 cut(s)	807, 1158, 1761
Asp718I	GGTACC	1 cut(s)	833
AspA2I	CCTAGG	1 cut(s)	878
AspLEI	GCGC	2 cut(s)	490, 1262
AspS9I	GGNCC	2 cut(s)	157, 1292
AsuC2I	CCSGG	3 cut(s)	44, 1295, 1901
AsuHPI	GGTGA	3 cut(s)	107, 247, 1255
AsuNHI	GCTAGC	2 cut(s)	25, 490
AvaI	CYCGRG	2 cut(s)	101, 159
AvrII	CCTAGG	1 cut(s)	878
BamHI	GGATCC	1 cut(s)	91
BanI	GGYRCC	1 cut(s)	833
BanII	GRGCYC	1 cut(s)	146
BauI	CACGAG	1 cut(s)	152
BbsI	GAAGAC	3 cut(s)	415, 1415, 1845
Bbv12I	GWGCWC	1 cut(s)	566
BbvCI	CCTCAGC	1 cut(s)	752
BbvI	GCAGC	2 cut(s)	472, 1657
BccI	CCATC	3 cut(s)	494, 1207, 1234
BceAI	ACGGC	1 cut(s)	685
BcgI	CGANNNNNNTGC	2 cut(s)	1364, 1398
BciT130I	CCWGG	2 cut(s)	1035, 1451
BcnI	CCSGG	3 cut(s)	44, 1295, 1901
BcoDI	GTCTC	5 cut(s)	98, 586, 1193, 1858, 1919
BfaI	CTAG	5 cut(s)	26, 491, 717, 866, 879
BfmI	CTRYAG	2 cut(s)	1333, 1880
BfoI	RGCGCY	1 cut(s)	1263
BglI	GCCNNNNNGGC	1 cut(s)	14
BisI	GCNGC	6 cut(s)	130, 486, 1180, 1566, 1671, 1690
BlnI	CCTAGG	1 cut(s)	878
BlsI	GCNGC	6 cut(s)	131, 487, 1181, 1567, 1672, 1691
Bme1390I	CCNGG	5 cut(s)	44, 1035, 1295, 1451, 1901
BmeT110I	CYCGRG	2 cut(s)	101, 159
BmgT120I	GGNCC	2 cut(s)	157, 1292
BmiI	GGNNCC	5 cut(s)	93, 673, 835, 1082, 1472
BmrFI	CCNGG	5 cut(s)	44, 1035, 1295, 1451, 1901
BmrI	ACTGGG	3 cut(s)	226, 828, 1398
BmsI	GCATC	5 cut(s)	301, 343, 1596, 1701, 1853
BmtI	GCTAGC	2 cut(s)	29, 494
BmuI	ACTGGG	3 cut(s)	226, 828, 1398
BpiI	GAAGAC	3 cut(s)	415, 1415, 1845
BplI	GAGNNNNNCTC	2 cut(s)	422, 454
Bpu10I	CCTNAGC	1 cut(s)	752
BpuEI	CTTGAG	3 cut(s)	257, 305, 580
BpuMI	CCSGG	3 cut(s)	44, 1295, 1901
Bsa29I	ATCGAT	1 cut(s)	367
BsaHI	GRCGYC	1 cut(s)	1752
BsaI	GGTCTC	3 cut(s)	98, 1858, 1919
BsaJI	CCNNGG	2 cut(s)	121, 878
BsaWI	WCCGGW	1 cut(s)	1765
BsaXI	ACNNNNNCTCC	6 cut(s)	583, 613, 640, 670, 1331, 1361
Bsc4I	CCNNNNNNNGG	1 cut(s)	1486
Bse1I	ACTGG	4 cut(s)	30, 221, 823, 1393
Bse3DI	GCAATG	1 cut(s)	390
BseBI	CCWGG	2 cut(s)	1035, 1451
BseCI	ATCGAT	1 cut(s)	367
BseDI	CCNNGG	2 cut(s)	121, 878
BseGI	GGATG	5 cut(s)	248, 751, 1172, 1245, 1844
BseLI	CCNNNNNNNGG	1 cut(s)	1486
BseMI	GCAATG	1 cut(s)	390
BseMII	CTCAG	3 cut(s)	131, 743, 1478
BseNI	ACTGG	4 cut(s)	30, 221, 823, 1393
BseRI	GAGGAG	3 cut(s)	170, 308, 769
BseXI	GCAGC	2 cut(s)	472, 1657
BseYI	CCCAGC	2 cut(s)	225, 1486
BsgI	GTGCAG	1 cut(s)	1249
Bsh1236I	CGCG	1 cut(s)	132
BshFI	GGCC	5 cut(s)	76, 158, 1293, 1354, 1449
BshNI	GGYRCC	1 cut(s)	833
BshVI	ATCGAT	1 cut(s)	367
BsiHKAI	GWGCWC	1 cut(s)	566
BsiHKCI	CYCGRG	2 cut(s)	101, 159
BsiSI	CCGG	5 cut(s)	43, 1176, 1295, 1766, 1900
BslFI	GGGAC	3 cut(s)	539, 836, 1385
BslI	CCNNNNNNNGG	1 cut(s)	1486
BsmAI	GTCTC	5 cut(s)	98, 586, 1193, 1858, 1919
BsmFI	GGGAC	3 cut(s)	539, 836, 1385
BsnI	GGCC	5 cut(s)	76, 158, 1293, 1354, 1449
Bso31I	GGTCTC	3 cut(s)	98, 1858, 1919
BsoBI	CYCGRG	2 cut(s)	101, 159
Bsp1286I	GDGCHC	2 cut(s)	146, 566
Bsp143I	GATC	8 cut(s)	51, 91, 263, 342, 368, 1013, 1030, 1342
BspANI	GGCC	5 cut(s)	76, 158, 1293, 1354, 1449
BspCNI	CTCAG	3 cut(s)	132, 744, 1477
BspDI	ATCGAT	1 cut(s)	367
BspFNI	CGCG	1 cut(s)	132
BspLI	GGNNCC	5 cut(s)	93, 673, 835, 1082, 1472
BspMAI	CTGCAG	1 cut(s)	1884
BspOI	GCTAGC	2 cut(s)	29, 494
BspPI	GGATC	6 cut(s)	86, 99, 363, 1021, 1025, 1350
BspQI	GCTCTTC	1 cut(s)	1269
BspT107I	GGYRCC	1 cut(s)	833
BspTNI	GGTCTC	3 cut(s)	98, 1858, 1919
BsrDI	GCAATG	1 cut(s)	390
BsrI	ACTGG	4 cut(s)	30, 221, 823, 1393
BssECI	CCNNGG	2 cut(s)	121, 878
BssMI	GATC	8 cut(s)	51, 91, 263, 342, 368, 1013, 1030, 1342
BssNI	GRCGYC	1 cut(s)	1752
BssSI	CACGAG	1 cut(s)	152
BssT1I	CCWWGG	1 cut(s)	878
Bst2BI	CACGAG	1 cut(s)	152
Bst2UI	CCWGG	2 cut(s)	1035, 1451
Bst4CI	ACNGT	4 cut(s)	568, 701, 1621, 1713
Bst6I	CTCTTC	3 cut(s)	851, 1269, 1752
BstACI	GRCGYC	1 cut(s)	1752
BstC8I	GCNNGC	6 cut(s)	27, 198, 492, 1330, 1356, 1611
BstDEI	CTNAG	4 cut(s)	140, 752, 1464, 1677
BstF5I	GGATG	5 cut(s)	248, 751, 1172, 1245, 1844
BstFNI	CGCG	1 cut(s)	132
BstH2I	RGCGCY	1 cut(s)	1263
BstHHI	GCGC	2 cut(s)	490, 1262
BstKTI	GATC	8 cut(s)	54, 94, 266, 345, 371, 1016, 1033, 1345
BstMAI	GTCTC	5 cut(s)	98, 586, 1193, 1858, 1919
BstMBI	GATC	8 cut(s)	51, 91, 263, 342, 368, 1013, 1030, 1342
BstMWI	GCNNNNNNNGC	6 cut(s)	14, 126, 491, 1259, 1695, 1879
BstNI	CCWGG	2 cut(s)	1035, 1451
BstNSI	RCATGY	3 cut(s)	634, 1332, 1486
BstSCI	CCNGG	5 cut(s)	42, 1033, 1293, 1449, 1899
BstSFI	CTRYAG	2 cut(s)	1333, 1880
BstUI	CGCG	1 cut(s)	132
BstV1I	GCAGC	2 cut(s)	472, 1657
BstV2I	GAAGAC	3 cut(s)	415, 1415, 1845
BstX2I	RGATCY	2 cut(s)	91, 1342
BstYI	RGATCY	2 cut(s)	91, 1342
Bsu15I	ATCGAT	1 cut(s)	367
BsuRI	GGCC	5 cut(s)	76, 158, 1293, 1354, 1449
BsuTUI	ATCGAT	1 cut(s)	367
BtsCI	GGATG	5 cut(s)	248, 751, 1172, 1245, 1844
BtsIMutI	CAGTG	3 cut(s)	137, 433, 1023
Cac8I	GCNNGC	6 cut(s)	27, 198, 492, 1330, 1356, 1611
CfoI	GCGC	2 cut(s)	490, 1262
Cfr13I	GGNCC	2 cut(s)	157, 1292
ClaI	ATCGAT	1 cut(s)	367
CseI	GACGC	1 cut(s)	1760
Csp6I	GTAC	1 cut(s)	834
CviQI	GTAC	1 cut(s)	834
DdeI	CTNAG	4 cut(s)	140, 752, 1464, 1677
DpnI	GATC	8 cut(s)	53, 93, 265, 344, 370, 1015, 1032, 1344
DpnII	GATC	8 cut(s)	51, 91, 263, 342, 368, 1013, 1030, 1342
Eam1104I	CTCTTC	3 cut(s)	851, 1269, 1752
EarI	CTCTTC	3 cut(s)	851, 1269, 1752
EciI	GGCGGA	1 cut(s)	943
Eco130I	CCWWGG	1 cut(s)	878
Eco147I	AGGCCT	1 cut(s)	1354
Eco24I	GRGCYC	1 cut(s)	146
Eco31I	GGTCTC	3 cut(s)	98, 1858, 1919
Eco57I	CTGAAG	4 cut(s)	409, 480, 1250, 1757
Eco88I	CYCGRG	2 cut(s)	101, 159
EcoRII	CCWGG	2 cut(s)	1033, 1449
EcoT14I	CCWWGG	1 cut(s)	878
EcoT38I	GRGCYC	1 cut(s)	146
ErhI	CCWWGG	1 cut(s)	878
FaqI	GGGAC	3 cut(s)	539, 836, 1385
FauI	CCCGC	2 cut(s)	299, 962
FblI	GTMKAC	1 cut(s)	1455
Fnu4HI	GCNGC	6 cut(s)	130, 486, 1180, 1566, 1671, 1690
FokI	GGATG	5 cut(s)	235, 758, 1159, 1252, 1831
FriOI	GRGCYC	1 cut(s)	146
Fsp4HI	GCNGC	6 cut(s)	130, 486, 1180, 1566, 1671, 1690
FspBI	CTAG	5 cut(s)	26, 491, 717, 866, 879
GlaI	GCGC	2 cut(s)	489, 1261
GluI	GCNGC	6 cut(s)	130, 486, 1180, 1566, 1671, 1690
GsaI	CCCAGC	2 cut(s)	229, 1490
HaeII	RGCGCY	1 cut(s)	1263
HaeIII	GGCC	5 cut(s)	76, 158, 1293, 1354, 1449
HapII	CCGG	5 cut(s)	43, 1176, 1295, 1766, 1900
HgaI	GACGC	1 cut(s)	1760
HhaI	GCGC	2 cut(s)	490, 1262
Hin1I	GRCGYC	1 cut(s)	1752
Hin6I	GCGC	2 cut(s)	488, 1260
HinP1I	GCGC	2 cut(s)	488, 1260
HincII	GTYRAC	1 cut(s)	816
HindII	GTYRAC	1 cut(s)	816
HinfI	GANTC	6 cut(s)	79, 134, 541, 1117, 1718, 1762
HpaI	GTTAAC	1 cut(s)	816
HpaII	CCGG	5 cut(s)	43, 1176, 1295, 1766, 1900
HphI	GGTGA	3 cut(s)	107, 247, 1255
Hpy166II	GTNNAC	3 cut(s)	697, 816, 1456
Hpy188III	TCNNGA	7 cut(s)	101, 103, 337, 717, 1006, 1268, 1863
Hpy8I	GTNNAC	3 cut(s)	697, 816, 1456
Hpy99I	CGWCG	2 cut(s)	16, 1577
HpyAV	CCTTC	8 cut(s)	105, 184, 243, 247, 268, 517, 1529, 1549
HpyCH4III	ACNGT	4 cut(s)	568, 701, 1621, 1713
HpyCH4IV	ACGT	2 cut(s)	825, 1575
HpyF10VI	GCNNNNNNNGC	6 cut(s)	14, 126, 491, 1259, 1695, 1879
HpyF3I	CTNAG	4 cut(s)	140, 752, 1464, 1677
HpySE526I	ACGT	2 cut(s)	825, 1575
Hsp92I	GRCGYC	1 cut(s)	1752
HspAI	GCGC	2 cut(s)	488, 1260
KpnI	GGTACC	1 cut(s)	837
KspAI	GTTAAC	1 cut(s)	816
Kzo9I	GATC	8 cut(s)	51, 91, 263, 342, 368, 1013, 1030, 1342
LguI	GCTCTTC	1 cut(s)	1269
LmnI	GCTCC	4 cut(s)	22, 677, 880, 1476
Lsp1109I	GCAGC	2 cut(s)	472, 1657
LweI	GCATC	5 cut(s)	301, 343, 1596, 1701, 1853
MaeI	CTAG	5 cut(s)	26, 491, 717, 866, 879
MaeII	ACGT	2 cut(s)	825, 1575
MaeIII	GTNAC	5 cut(s)	470, 1680, 1705, 1726, 1884
MalI	GATC	8 cut(s)	53, 93, 265, 344, 370, 1015, 1032, 1344
MboI	GATC	8 cut(s)	51, 91, 263, 342, 368, 1013, 1030, 1342
MfeI	CAATTG	1 cut(s)	1026
MflI	RGATCY	2 cut(s)	91, 1342
MhlI	GDGCHC	2 cut(s)	146, 566
MlyI	GAGTC	3 cut(s)	73, 128, 535
MmeI	TCCRAC	2 cut(s)	87, 1048
MroXI	GAANNNNTTC	3 cut(s)	807, 1158, 1761
MseI	TTAA	5 cut(s)	546, 666, 815, 1581, 1785
MspA1I	CMGCKG	1 cut(s)	1832
MspI	CCGG	5 cut(s)	43, 1176, 1295, 1766, 1900
MspR9I	CCNGG	5 cut(s)	44, 1035, 1295, 1451, 1901
MunI	CAATTG	1 cut(s)	1026
MvaI	CCWGG	2 cut(s)	1035, 1451
MvnI	CGCG	1 cut(s)	132
MwoI	GCNNNNNNNGC	6 cut(s)	14, 126, 491, 1259, 1695, 1879
NciI	CCSGG	3 cut(s)	44, 1295, 1901
NdeII	GATC	8 cut(s)	51, 91, 263, 342, 368, 1013, 1030, 1342
NheI	GCTAGC	2 cut(s)	25, 490
NlaIV	GGNNCC	5 cut(s)	93, 673, 835, 1082, 1472
NmeAIII	GCCGAG	2 cut(s)	183, 1019
NspI	RCATGY	3 cut(s)	634, 1332, 1486
PaeI	GCATGC	1 cut(s)	1332
PaeR7I	CTCGAG	1 cut(s)	101
PceI	AGGCCT	1 cut(s)	1354
PciSI	GCTCTTC	1 cut(s)	1269
PcsI	WCGNNNNNNNCGW	1 cut(s)	129
PdmI	GAANNNNTTC	3 cut(s)	807, 1158, 1761
PfeI	GAWTC	3 cut(s)	1117, 1718, 1762
PflMI	CCANNNNNTGG	1 cut(s)	1486
PfoI	TCCNGGA	1 cut(s)	1899
PkrI	GCNGC	6 cut(s)	131, 487, 1181, 1567, 1672, 1691
PleI	GAGTC	3 cut(s)	73, 128, 535
PpsI	GAGTC	3 cut(s)	73, 128, 535
Psp6I	CCWGG	2 cut(s)	1033, 1449
PspFI	CCCAGC	2 cut(s)	225, 1486
PspGI	CCWGG	2 cut(s)	1033, 1449
PspN4I	GGNNCC	5 cut(s)	93, 673, 835, 1082, 1472
PspPI	GGNCC	2 cut(s)	157, 1292
PstI	CTGCAG	1 cut(s)	1884
PsuI	RGATCY	2 cut(s)	91, 1342
PvuII	CAGCTG	1 cut(s)	1832
RsaI	GTAC	1 cut(s)	835
RsaNI	GTAC	1 cut(s)	834
SapI	GCTCTTC	1 cut(s)	1269
SaqAI	TTAA	5 cut(s)	546, 666, 815, 1581, 1785
SatI	GCNGC	6 cut(s)	130, 486, 1180, 1566, 1671, 1690
Sau3AI	GATC	8 cut(s)	51, 91, 263, 342, 368, 1013, 1030, 1342
Sau96I	GGNCC	2 cut(s)	157, 1292
SchI	GAGTC	3 cut(s)	73, 128, 535
ScrFI	CCNGG	5 cut(s)	44, 1035, 1295, 1451, 1901
SduI	GDGCHC	2 cut(s)	146, 566
SfaNI	GCATC	5 cut(s)	301, 343, 1596, 1701, 1853
SfcI	CTRYAG	2 cut(s)	1333, 1880
Sfr274I	CTCGAG	1 cut(s)	101
SlaI	CTCGAG	1 cut(s)	101
SmlI	CTYRAG	4 cut(s)	101, 272, 320, 559
SmoI	CTYRAG	4 cut(s)	101, 272, 320, 559
SphI	GCATGC	1 cut(s)	1332
SseBI	AGGCCT	1 cut(s)	1354
SspMI	CTAG	5 cut(s)	26, 491, 717, 866, 879
StuI	AGGCCT	1 cut(s)	1354
StyD4I	CCNGG	5 cut(s)	42, 1033, 1293, 1449, 1899
StyI	CCWWGG	1 cut(s)	878
TaaI	ACNGT	4 cut(s)	568, 701, 1621, 1713
TaiI	ACGT	2 cut(s)	828, 1578
TauI	GCSGC	4 cut(s)	132, 1182, 1568, 1692
TfiI	GAWTC	3 cut(s)	1117, 1718, 1762
Tru1I	TTAA	5 cut(s)	546, 666, 815, 1581, 1785
Tru9I	TTAA	5 cut(s)	546, 666, 815, 1581, 1785
TscAI	CASTG	3 cut(s)	144, 433, 1023
TseI	GCWGC	2 cut(s)	485, 1670
TspDTI	ATGAA	6 cut(s)	17, 372, 549, 769, 892, 1051
TspGWI	ACGGA	4 cut(s)	35, 361, 664, 1413
TspRI	CASTG	3 cut(s)	144, 433, 1023
Van91I	CCANNNNNTGG	1 cut(s)	1486
XapI	RAATTY	3 cut(s)	621, 973, 1058
XbaI	TCTAGA	1 cut(s)	716
XceI	RCATGY	3 cut(s)	634, 1332, 1486
XhoI	CTCGAG	1 cut(s)	101
XmaJI	CCTAGG	1 cut(s)	878
XmiI	GTMKAC	1 cut(s)	1455
XmnI	GAANNNNTTC	3 cut(s)	807, 1158, 1761
XspI	CTAG	5 cut(s)	26, 491, 717, 866, 879

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.