Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0015220

Physical Location & Seq

Genomic Coordinates Forward (+)

87968115 .. 87970701

Gene Structure 2587 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54302

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGAAAGCTCCGTCGGCGGCAACCGAGTTAGCGAGTCGAATAAGCCGAGTTCTGATCTCCGCTTCCAACAACACAAGGCCGACTCGCTCATGGAACCCTTCACTCGAGAACGCTCTTCACCGCCTCGGTTGCCGCGACTCACTGAGTCCACAACTCGTCGCCCGAGTCATCGATCCTTTCCTCCTCAACCACCACTCCCTCGCTCTCGGCTTCTTCAACTGGGCTTCTCAGCAGCCCTCCTTCTCCCACACCTCCACCACCTACCAATCAGTCCTCAAGTCTCTTTCTTTTTCCCGCCAATTTTCCGCCATTGATGCTCTGCTCAAGCAAGTCAGAGCCCAGAGAATCGGCCTCGATGCATCGGTCTATCGCTCCGTGATTGCTTCGCTCATCATAGGAAAGAAAACCCACAATGCCTTTTTGGTGTTCGGCGAGGTTGGGATTGAAGATATTGGGCATGAGATTTGCAACTCACTCTTGGCTGCTCTGGCTTCTGATGGGTATTTGGAGCATGCCCAGAAGCTGTTTGATGAAATGACTCTGAGAGCTGTGCCTGTGAGCACCGCTGGATTTGGTGTGTTTGTGTGGCGGCTATGCGGAAACGCTGAATTGAGTAAGATATTGAGTATGTTAGATGAGGTTAGGAGGAGTGGCTGGTCGATCAATGGGTCCGTCGTAGCGCTTCTGATCATTCACGGGCTTTGTAGGGCTTCGAGAGTGTCAGAGGCTTTCTGGGTGCTGGATGAGCTGAGGAATAGAGAGTGCAAACCTGATTTCATGGCGTATAGGATTGTTGCTGAAGCTGTTCGGTCTACTGGGAATGTGGTTGATACAGAAAAGGTTTTGAAGAAGAAGAGAAAGCTAGGTGTGGCTCCGAGGAGTAGTGATTATAGGGAGTTCATACTTGGCTTGATTTCGGAGAGACGGATATATGAAGCGAAAGAGTTGGGAGAAGTGATAGTTAGTGGGAACTTTCCAATCGAAGATGATGTTCTCAATGTGTTGATAGGGTCTGTGTCAACTATTGATCCTGGCTCTGCAATGATGTTTTTCAAGTTCATGGTTGGAAAAGCGAGTTTCCCAACTCTTTTGACATTGAGCAATTTGTGTAGGAATCTAAGTAAGCGTAGCAACTGTGATGAATTGCTGGAAGTTTTTCAACTTTTGTCTTCTGGTGATTATTTTAAAGATTTGGAGACTTACAACGTGATGGTGTCATTCCTGTGCAAAGCAGGAATGGTGAAGGAAGCCTATGGGGTACTTCCAGAGATGAAGAAGAAAGGGTTAAACCCAGATCTTTCAACTTATAATTCTCTTATTGAAGCATGTTGTAGGGAAGATCTATTGAGGCCTGCTAAAAGGCTGTGGGATGAAATGTTTGCAAATGGGTGCAGAGGAAATTTGAAGACTTACAGTATCTTAATTCATAAGTTTTCGGAAGCAGGCCCAGTTGATGAGGCTCTAAGGCTCTTTTACCACATGTTGGGAAGAGAAGTTACACCCGATGCGATGACTTGCACAACTCTACTTGAAGGGCTTTGTCAAGACACAAAGCTTGAAGCTGCTTTGGAAGTTTTTGACAAGTGTGTTGAACAGGATTTGATGCTTGCCCAATCTGTGTTGGGTACATTTATCCTCTCTTTATGCAAAGCAGGTCTTTTTCTTGCCGCTTCTAGGTTACTCTGCCGCCTCAGTTTTGATATAGCACATTCAGATTCTCATGTAGTTTTGCTGAAGTGTTTAGCCGATGCTAAAGAGATTCCAGTGGCCATTGAACACATTAACTGGGTTCGCCAAGCTTCACCCTCCATGTTGCAAACTATTTCAAACGAACTAGCATCGACTTCTTCTTCTCCAACACCAGAGCCAATTTTACTGTTGCTTCAAACAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MNE1 PPR PPR_2 PPR_3

Protein Analysis

631

Amino Acids

69.91

Weight (kDa)

7.16

Isoelectric Point (pI)

39.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	397 - 445	6.3e-15	PPR repeat family
PPR_1	PF12854	397 - 425	1.8e-06	PPR repeat
PPR_3	PF13812	397 - 443	6.9e-07	Pentatricopeptide repeat domain
PPR_long	PF17177	399 - 511	6.8e-08	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	400 - 429	4.7e-07	PPR repeat
PPR_1	PF12854	427 - 459	5.5e-09	PPR repeat
PPR_2	PF13041	431 - 478	2.6e-12	PPR repeat family
PPR	PF01535	434 - 464	6.1e-06	PPR repeat
PPR_2	PF13041	474 - 515	9.3e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015220)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14080
fragaria_vesca	FvH4_6g53850
malus_domestica	MD09G1008000.v1.1
prunus_persica	Prupe.3G308900_v2.0.a1 Prupe.3G308900_v2.0.a1
pyrus_communis	pycom111g00640
rosa_chinensis	RchiOBHm_Chr2g0175991
rosa_laevigata	RLG00000022371
rosa_multiflora	Rmu_sc0012513.1_g000006
rosa_roxburghii	Rroxscaffold_2G00076880
rosa_rugosa	Rorug02G0589200
rosa_samantha	Rh2AG668400 Rh2BG679900 Rh2CG642800 Rh2DG693600
rosa_wichuraiana	Rw2G054800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1308
Acc36I	ACCTGC	1 cut(s)	1643
AccB7I	CCANNNNNTGG	1 cut(s)	1483
AccI	GTMKAC	1 cut(s)	812
AccII	CGCG	1 cut(s)	135
AclWI	GGATC	2 cut(s)	167, 1022
AcoI	YGGCCR	1 cut(s)	1767
AcsI	RAATTY	1 cut(s)	1399
AcuI	CTGAAG	2 cut(s)	819, 1754
AfaI	GTAC	2 cut(s)	1260, 1627
AfeI	AGCGCT	1 cut(s)	681
AfiI	CCNNNNNNNGG	2 cut(s)	1483, 1674
AflIII	ACRYGT	1 cut(s)	1479
AjnI	CCWGG	1 cut(s)	1030
AluBI	AGCT	9 cut(s)	8, 523, 548, 748, 803, 862, 1555, 1562, 1799
AluI	AGCT	9 cut(s)	8, 523, 548, 748, 803, 862, 1555, 1562, 1799
Alw21I	GWGCWC	1 cut(s)	563
Alw26I	GTCTC	3 cut(s)	285, 916, 1190
AlwI	GGATC	2 cut(s)	167, 1022
AlwNI	CAGNNNCTG	1 cut(s)	523
Ama87I	CYCGRG	2 cut(s)	104, 162
Aor51HI	AGCGCT	1 cut(s)	681
AoxI	GGCC	5 cut(s)	77, 349, 1349, 1444, 1767
ApeKI	GCWGC	3 cut(s)	232, 482, 1562
ApoI	RAATTY	1 cut(s)	1399
Asp700I	GAANNNNTTC	2 cut(s)	804, 1155
AspLEI	GCGC	1 cut(s)	682
AspS9I	GGNCC	2 cut(s)	669, 1445
AsuHPI	GGTGA	4 cut(s)	110, 1187, 1252, 1794
AvaI	CYCGRG	2 cut(s)	104, 162
AvaII	GGWCC	1 cut(s)	669
BalI	TGGCCA	1 cut(s)	1769
BanII	GRGCYC	1 cut(s)	340
BarI	GAAGNNNNNNTAC	2 cut(s)	1480, 1512
BbsI	GAAGAC	2 cut(s)	1161, 1412
Bbv12I	GWGCWC	1 cut(s)	563
BbvCI	CCTCAGC	1 cut(s)	749
BbvI	GCAGC	3 cut(s)	244, 469, 1549
BccI	CCATC	2 cut(s)	491, 1204
BciT130I	CCWGG	1 cut(s)	1032
BclI	TGATCA	1 cut(s)	687
BcoDI	GTCTC	3 cut(s)	285, 916, 1190
BfaI	CTAG	3 cut(s)	863, 1674, 1835
BfoI	RGCGCY	1 cut(s)	683
BfuAI	ACCTGC	1 cut(s)	1643
BglII	AGATCT	2 cut(s)	1294, 1339
BisI	GCNGC	8 cut(s)	18, 133, 233, 483, 590, 1563, 1668, 1687
BlsI	GCNGC	8 cut(s)	19, 134, 234, 484, 591, 1564, 1669, 1688
Bme1390I	CCNGG	1 cut(s)	1032
Bme18I	GGWCC	1 cut(s)	669
BmeT110I	CYCGRG	2 cut(s)	104, 162
BmgT120I	GGNCC	2 cut(s)	669, 1445
BmiI	GGNNCC	3 cut(s)	95, 670, 873
BmrFI	CCNGG	1 cut(s)	1032
BmrI	ACTGGG	4 cut(s)	229, 825, 1442, 1795
BmsI	GCATC	7 cut(s)	304, 346, 368, 1495, 1593, 1738, 1847
BmuI	ACTGGG	4 cut(s)	229, 825, 1442, 1795
BpiI	GAAGAC	2 cut(s)	1161, 1412
Bpu10I	CCTNAGC	1 cut(s)	749
BpuEI	CTTGAG	2 cut(s)	260, 308
Bsa29I	ATCGAT	1 cut(s)	171
BsaJI	CCNNGG	2 cut(s)	124, 875
BsaXI	ACNNNNNCTCC	2 cut(s)	179, 209
Bsc4I	CCNNNNNNNGG	2 cut(s)	1483, 1674
Bse1I	ACTGG	5 cut(s)	224, 820, 1448, 1763, 1790
Bse3DI	GCAATG	1 cut(s)	1047
BseBI	CCWGG	1 cut(s)	1032
BseCI	ATCGAT	1 cut(s)	171
BseDI	CCNNGG	2 cut(s)	124, 875
BseGI	GGATG	2 cut(s)	748, 1375
BseLI	CCNNNNNNNGG	2 cut(s)	1483, 1674
BseMI	GCAATG	1 cut(s)	1047
BseMII	CTCAG	5 cut(s)	134, 242, 533, 740, 1705
BseNI	ACTGG	5 cut(s)	224, 820, 1448, 1763, 1790
BseRI	GAGGAG	3 cut(s)	173, 661, 892
BseXI	GCAGC	3 cut(s)	244, 469, 1549
BsgI	GTGCAG	1 cut(s)	1411
Bsh1236I	CGCG	1 cut(s)	135
BshFI	GGCC	5 cut(s)	79, 351, 1351, 1446, 1769
BshVI	ATCGAT	1 cut(s)	171
BsiHKAI	GWGCWC	1 cut(s)	563
BsiHKCI	CYCGRG	2 cut(s)	104, 162
BslI	CCNNNNNNNGG	2 cut(s)	1483, 1674
BsmAI	GTCTC	3 cut(s)	285, 916, 1190
BsmBI	CGTCTC	1 cut(s)	916
BsnI	GGCC	5 cut(s)	79, 351, 1351, 1446, 1769
BsoBI	CYCGRG	2 cut(s)	104, 162
Bsp1286I	GDGCHC	2 cut(s)	340, 563
Bsp143I	GATC	7 cut(s)	54, 172, 660, 687, 1027, 1294, 1339
BspANI	GGCC	5 cut(s)	79, 351, 1351, 1446, 1769
BspCNI	CTCAG	5 cut(s)	135, 241, 534, 741, 1704
BspDI	ATCGAT	1 cut(s)	171
BspFNI	CGCG	1 cut(s)	135
BspLI	GGNNCC	3 cut(s)	95, 670, 873
BspMI	ACCTGC	1 cut(s)	1643
BspPI	GGATC	2 cut(s)	167, 1022
BspQI	GCTCTTC	1 cut(s)	120
BsrDI	GCAATG	1 cut(s)	1047
BsrI	ACTGG	5 cut(s)	224, 820, 1448, 1763, 1790
BssECI	CCNNGG	2 cut(s)	124, 875
BssMI	GATC	7 cut(s)	54, 172, 660, 687, 1027, 1294, 1339
Bst2UI	CCWGG	1 cut(s)	1032
Bst4CI	ACNGT	3 cut(s)	1136, 1415, 1878
Bst6I	CTCTTC	3 cut(s)	120, 848, 1483
BstC8I	GCNNGC	4 cut(s)	513, 1353, 1444, 1608
BstDEI	CTNAG	7 cut(s)	143, 228, 542, 749, 1118, 1463, 1691
BstF5I	GGATG	2 cut(s)	748, 1375
BstFNI	CGCG	1 cut(s)	135
BstH2I	RGCGCY	1 cut(s)	683
BstHHI	GCGC	1 cut(s)	682
BstKTI	GATC	7 cut(s)	57, 175, 663, 690, 1030, 1297, 1342
BstMAI	GTCTC	3 cut(s)	285, 916, 1190
BstMBI	GATC	7 cut(s)	54, 172, 660, 687, 1027, 1294, 1339
BstMWI	GCNNNNNNNGC	5 cut(s)	14, 129, 314, 488, 745
BstNI	CCWGG	1 cut(s)	1032
BstNSI	RCATGY	3 cut(s)	515, 1329, 1483
BstSCI	CCNGG	1 cut(s)	1030
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	3 cut(s)	244, 469, 1549
BstV2I	GAAGAC	2 cut(s)	1161, 1412
BstX2I	RGATCY	2 cut(s)	1294, 1339
BstYI	RGATCY	2 cut(s)	1294, 1339
Bsu15I	ATCGAT	1 cut(s)	171
BsuRI	GGCC	5 cut(s)	79, 351, 1351, 1446, 1769
BsuTUI	ATCGAT	1 cut(s)	171
BtgZI	GCGATG	1 cut(s)	1523
BtsCI	GGATG	2 cut(s)	748, 1375
BtsIMutI	CAGTG	2 cut(s)	140, 1770
BveI	ACCTGC	1 cut(s)	1643
Cac8I	GCNNGC	4 cut(s)	513, 1353, 1444, 1608
CaiI	CAGNNNCTG	1 cut(s)	523
CfoI	GCGC	1 cut(s)	682
Cfr13I	GGNCC	2 cut(s)	669, 1445
ClaI	ATCGAT	1 cut(s)	171
Csp6I	GTAC	2 cut(s)	1259, 1626
CviAII	CATG	9 cut(s)	90, 458, 512, 778, 1060, 1326, 1480, 1721, 1810
CviQI	GTAC	2 cut(s)	1259, 1626
DdeI	CTNAG	7 cut(s)	143, 228, 542, 749, 1118, 1463, 1691
DpnI	GATC	7 cut(s)	56, 174, 662, 689, 1029, 1296, 1341
DpnII	GATC	7 cut(s)	54, 172, 660, 687, 1027, 1294, 1339
DraI	TTTAAA	1 cut(s)	1186
EaeI	YGGCCR	1 cut(s)	1767
Eam1104I	CTCTTC	3 cut(s)	120, 848, 1483
EarI	CTCTTC	3 cut(s)	120, 848, 1483
EciI	GGCGGA	1 cut(s)	295
Eco147I	AGGCCT	1 cut(s)	1351
Eco24I	GRGCYC	1 cut(s)	340
Eco47I	GGWCC	1 cut(s)	669
Eco47III	AGCGCT	1 cut(s)	681
Eco57I	CTGAAG	2 cut(s)	819, 1754
Eco88I	CYCGRG	2 cut(s)	104, 162
EcoRII	CCWGG	1 cut(s)	1030
EcoT22I	ATGCAT	1 cut(s)	361
EcoT38I	GRGCYC	1 cut(s)	340
Esp3I	CGTCTC	1 cut(s)	916
FaeI	CATG	9 cut(s)	93, 461, 515, 781, 1063, 1329, 1483, 1724, 1813
FalI	AAGNNNNNCTT	2 cut(s)	1641, 1673
FatI	CATG	9 cut(s)	89, 457, 511, 777, 1059, 1325, 1479, 1720, 1809
FauI	CCCGC	1 cut(s)	302
FbaI	TGATCA	1 cut(s)	687
FblI	GTMKAC	1 cut(s)	812
Fnu4HI	GCNGC	8 cut(s)	18, 133, 233, 483, 590, 1563, 1668, 1687
FokI	GGATG	2 cut(s)	755, 1382
FriOI	GRGCYC	1 cut(s)	340
Fsp4HI	GCNGC	8 cut(s)	18, 133, 233, 483, 590, 1563, 1668, 1687
FspBI	CTAG	3 cut(s)	863, 1674, 1835
GlaI	GCGC	1 cut(s)	681
GluI	GCNGC	8 cut(s)	18, 133, 233, 483, 590, 1563, 1668, 1687
HaeII	RGCGCY	1 cut(s)	683
HaeIII	GGCC	5 cut(s)	79, 351, 1351, 1446, 1769
HhaI	GCGC	1 cut(s)	682
Hin1II	CATG	9 cut(s)	93, 461, 515, 781, 1063, 1329, 1483, 1724, 1813
Hin6I	GCGC	1 cut(s)	680
HinP1I	GCGC	1 cut(s)	680
HincII	GTYRAC	1 cut(s)	1020
HindII	GTYRAC	1 cut(s)	1020
HindIII	AAGCTT	2 cut(s)	1553, 1797
HphI	GGTGA	4 cut(s)	110, 1187, 1252, 1794
Hpy166II	GTNNAC	3 cut(s)	149, 813, 1020
Hpy188III	TCNNGA	4 cut(s)	106, 714, 1265, 1544
Hpy8I	GTNNAC	3 cut(s)	149, 813, 1020
Hpy99I	CGWCG	3 cut(s)	16, 161, 677
HpyAV	CCTTC	4 cut(s)	108, 250, 1237, 1526
HpyCH4III	ACNGT	3 cut(s)	1136, 1415, 1878
HpyCH4IV	ACGT	1 cut(s)	1206
HpyF10VI	GCNNNNNNNGC	5 cut(s)	14, 129, 314, 488, 745
HpyF3I	CTNAG	7 cut(s)	143, 228, 542, 749, 1118, 1463, 1691
HpySE526I	ACGT	1 cut(s)	1206
Hsp92II	CATG	9 cut(s)	93, 461, 515, 781, 1063, 1329, 1483, 1724, 1813
HspAI	GCGC	1 cut(s)	680
Ksp22I	TGATCA	1 cut(s)	687
Kzo9I	GATC	7 cut(s)	54, 172, 660, 687, 1027, 1294, 1339
LguI	GCTCTTC	1 cut(s)	120
LmnI	GCTCC	4 cut(s)	13, 377, 508, 877
Lsp1109I	GCAGC	3 cut(s)	244, 469, 1549
LweI	GCATC	7 cut(s)	304, 346, 368, 1495, 1593, 1738, 1847
MaeI	CTAG	3 cut(s)	863, 1674, 1835
MaeII	ACGT	1 cut(s)	1206
MaeIII	GTNAC	2 cut(s)	1495, 1677
MalI	GATC	7 cut(s)	56, 174, 662, 689, 1029, 1296, 1341
MboI	GATC	7 cut(s)	54, 172, 660, 687, 1027, 1294, 1339
MflI	RGATCY	2 cut(s)	1294, 1339
MhlI	GDGCHC	2 cut(s)	340, 563
MlsI	TGGCCA	1 cut(s)	1769
MluCI	AATT	9 cut(s)	299, 608, 1102, 1142, 1309, 1399, 1422, 1869, 1890
MluNI	TGGCCA	1 cut(s)	1769
MlyI	GAGTC	6 cut(s)	43, 76, 131, 154, 174, 532
MmeI	TCCRAC	3 cut(s)	90, 1045, 1880
Mox20I	TGGCCA	1 cut(s)	1769
Mph1103I	ATGCAT	1 cut(s)	361
MroXI	GAANNNNTTC	2 cut(s)	804, 1155
MscI	TGGCCA	1 cut(s)	1769
MseI	TTAA	4 cut(s)	1185, 1286, 1421, 1782
MslI	CAYNNNNRTG	1 cut(s)	1222
Msp20I	TGGCCA	1 cut(s)	1769
MspA1I	CMGCKG	1 cut(s)	566
MspR9I	CCNGG	1 cut(s)	1032
MvaI	CCWGG	1 cut(s)	1032
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	5 cut(s)	14, 129, 314, 488, 745
NdeII	GATC	7 cut(s)	54, 172, 660, 687, 1027, 1294, 1339
NlaIII	CATG	9 cut(s)	93, 461, 515, 781, 1063, 1329, 1483, 1724, 1813
NlaIV	GGNNCC	3 cut(s)	95, 670, 873
NmeAIII	GCCGAG	2 cut(s)	71, 186
NsiI	ATGCAT	1 cut(s)	361
NspI	RCATGY	3 cut(s)	515, 1329, 1483
PaeI	GCATGC	1 cut(s)	515
PaeR7I	CTCGAG	1 cut(s)	104
PceI	AGGCCT	1 cut(s)	1351
PciI	ACATGT	1 cut(s)	1479
PciSI	GCTCTTC	1 cut(s)	120
PcsI	WCGNNNNNNNCGW	2 cut(s)	43, 132
PdmI	GAANNNNTTC	2 cut(s)	804, 1155
PfeI	GAWTC	4 cut(s)	345, 1114, 1715, 1759
PflMI	CCANNNNNTGG	1 cut(s)	1483
PkrI	GCNGC	8 cut(s)	19, 134, 234, 484, 591, 1564, 1669, 1688
PleI	GAGTC	6 cut(s)	42, 76, 131, 153, 173, 532
PpsI	GAGTC	6 cut(s)	42, 76, 131, 153, 173, 532
PscI	ACATGT	1 cut(s)	1479
PsiI	TTATAA	1 cut(s)	1308
Psp6I	CCWGG	1 cut(s)	1030
PspGI	CCWGG	1 cut(s)	1030
PspN4I	GGNNCC	3 cut(s)	95, 670, 873
PspPI	GGNCC	2 cut(s)	669, 1445
PstNI	CAGNNNCTG	1 cut(s)	523
PsuI	RGATCY	2 cut(s)	1294, 1339
RsaI	GTAC	2 cut(s)	1260, 1627
RsaNI	GTAC	2 cut(s)	1259, 1626
RseI	CAYNNNNRTG	1 cut(s)	1222
SapI	GCTCTTC	1 cut(s)	120
SaqAI	TTAA	4 cut(s)	1185, 1286, 1421, 1782
SatI	GCNGC	8 cut(s)	18, 133, 233, 483, 590, 1563, 1668, 1687
Sau3AI	GATC	7 cut(s)	54, 172, 660, 687, 1027, 1294, 1339
Sau96I	GGNCC	2 cut(s)	669, 1445
SchI	GAGTC	6 cut(s)	43, 76, 131, 154, 174, 532
ScrFI	CCNGG	1 cut(s)	1032
SduI	GDGCHC	2 cut(s)	340, 563
SfaNI	GCATC	7 cut(s)	304, 346, 368, 1495, 1593, 1738, 1847
Sfr274I	CTCGAG	1 cut(s)	104
SinI	GGWCC	1 cut(s)	669
SlaI	CTCGAG	1 cut(s)	104
SmiMI	CAYNNNNRTG	1 cut(s)	1222
SmlI	CTYRAG	3 cut(s)	104, 275, 323
SmoI	CTYRAG	3 cut(s)	104, 275, 323
SphI	GCATGC	1 cut(s)	515
Sse9I	AATT	9 cut(s)	299, 608, 1102, 1142, 1309, 1399, 1422, 1869, 1890
SseBI	AGGCCT	1 cut(s)	1351
SspMI	CTAG	3 cut(s)	863, 1674, 1835
StuI	AGGCCT	1 cut(s)	1351
StyD4I	CCNGG	1 cut(s)	1030
TaaI	ACNGT	3 cut(s)	1136, 1415, 1878
TaiI	ACGT	1 cut(s)	1209
TaqI	TCGA	8 cut(s)	37, 105, 171, 354, 659, 713, 981, 1841
TaqII	GACCGA	2 cut(s)	352, 798
TasI	AATT	9 cut(s)	299, 608, 1102, 1142, 1309, 1399, 1422, 1869, 1890
TauI	GCSGC	5 cut(s)	20, 135, 592, 1670, 1689
TfiI	GAWTC	4 cut(s)	345, 1114, 1715, 1759
Tru1I	TTAA	4 cut(s)	1185, 1286, 1421, 1782
Tru9I	TTAA	4 cut(s)	1185, 1286, 1421, 1782
TscAI	CASTG	2 cut(s)	147, 1770
TseI	GCWGC	3 cut(s)	232, 482, 1562
TspGWI	ACGGA	3 cut(s)	364, 661, 940
TspRI	CASTG	2 cut(s)	147, 1770
Van91I	CCANNNNNTGG	1 cut(s)	1483
VpaK11BI	GGWCC	1 cut(s)	669
XapI	RAATTY	1 cut(s)	1399
XceI	RCATGY	3 cut(s)	515, 1329, 1483
XhoI	CTCGAG	1 cut(s)	104
XmiI	GTMKAC	1 cut(s)	812
XmnI	GAANNNNTTC	2 cut(s)	804, 1155
XspI	CTAG	3 cut(s)	863, 1674, 1835
Zsp2I	ATGCAT	1 cut(s)	361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.