Pentatricopeptide repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14080 |
| fragaria_vesca | FvH4_6g53850 |
| malus_domestica | MD09G1008000.v1.1 |
| prunus_persica | Prupe.3G308900_v2.0.a1 Prupe.3G308900_v2.0.a1 |
| pyrus_communis | pycom111g00640 |
| rosa_chinensis | RchiOBHm_Chr2g0175991 |
| rosa_laevigata | RLG00000022371 |
| rosa_multiflora | Rmu_sc0012513.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00076880 |
| rosa_rugosa | Rorug02G0589200 |
| rosa_samantha | Rh2AG668400 Rh2BG679900 Rh2CG642800 Rh2DG693600 |
| rosa_wichuraiana | Rw2G054800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 833 |
| AccB1I | GGYRCC | 1 cut(s) | 833 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1486 |
| AccII | CGCG | 1 cut(s) | 132 |
| AclWI | GGATC | 4 cut(s) | 86, 99, 1021, 1025 |
| AcsI | RAATTY | 3 cut(s) | 621, 973, 1058 |
| AcuI | CTGAAG | 4 cut(s) | 409, 1250, 1757, 1776 |
| AfaI | GTAC | 1 cut(s) | 835 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1486 |
| AgsI | TTSAA | 9 cut(s) | 214, 301, 850, 1325, 1408, 1535, 1562, 1595, 1863 |
| AjnI | CCWGG | 2 cut(s) | 1033, 1449 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1050, 1082 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 640, 672 |
| AluBI | AGCT | 8 cut(s) | 25, 551, 683, 751, 865, 875, 1748, 1832 |
| AluI | AGCT | 8 cut(s) | 25, 551, 683, 751, 865, 875, 1748, 1832 |
| Alw21I | GWGCWC | 2 cut(s) | 566, 1782 |
| Alw26I | GTCTC | 8 cut(s) | 98, 282, 353, 444, 586, 722, 1193, 1919 |
| AlwI | GGATC | 4 cut(s) | 86, 99, 1021, 1025 |
| Ama87I | CYCGRG | 2 cut(s) | 101, 159 |
| AoxI | GGCC | 5 cut(s) | 74, 156, 1291, 1352, 1447 |
| ApeKI | GCWGC | 3 cut(s) | 17, 485, 1670 |
| ApoI | RAATTY | 3 cut(s) | 621, 973, 1058 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1364, 1396 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 807, 1158, 1761 |
| Asp718I | GGTACC | 1 cut(s) | 833 |
| AspA2I | CCTAGG | 1 cut(s) | 878 |
| AspLEI | GCGC | 2 cut(s) | 490, 1262 |
| AspS9I | GGNCC | 2 cut(s) | 157, 1292 |
| AsuC2I | CCSGG | 3 cut(s) | 44, 1295, 1901 |
| AsuHPI | GGTGA | 3 cut(s) | 179, 247, 1255 |
| AsuII | TTCGAA | 3 cut(s) | 1056, 1572, 1891 |
| AsuNHI | GCTAGC | 2 cut(s) | 25, 490 |
| AvaI | CYCGRG | 2 cut(s) | 101, 159 |
| AvrII | CCTAGG | 1 cut(s) | 878 |
| BamHI | GGATCC | 1 cut(s) | 91 |
| BanI | GGYRCC | 1 cut(s) | 833 |
| BanII | GRGCYC | 1 cut(s) | 146 |
| BauI | CACGAG | 1 cut(s) | 152 |
| BbsI | GAAGAC | 4 cut(s) | 415, 1042, 1415, 1845 |
| Bbv12I | GWGCWC | 2 cut(s) | 566, 1782 |
| BbvI | GCAGC | 3 cut(s) | 29, 472, 1657 |
| BccI | CCATC | 4 cut(s) | 494, 1207, 1234, 1781 |
| BceAI | ACGGC | 1 cut(s) | 685 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1364, 1398, 1871, 1905 |
| BciT130I | CCWGG | 2 cut(s) | 1035, 1451 |
| BcnI | CCSGG | 3 cut(s) | 44, 1295, 1901 |
| BcoDI | GTCTC | 8 cut(s) | 98, 282, 353, 444, 586, 722, 1193, 1919 |
| BfaI | CTAG | 5 cut(s) | 26, 491, 717, 866, 879 |
| BfmI | CTRYAG | 1 cut(s) | 1880 |
| BfoI | RGCGCY | 1 cut(s) | 1263 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 14 |
| BglII | AGATCT | 1 cut(s) | 1342 |
| BisI | GCNGC | 7 cut(s) | 18, 130, 486, 1180, 1566, 1671, 1690 |
| BlnI | CCTAGG | 1 cut(s) | 878 |
| BlsI | GCNGC | 7 cut(s) | 19, 131, 487, 1181, 1567, 1672, 1691 |
| Bme1390I | CCNGG | 5 cut(s) | 44, 1035, 1295, 1451, 1901 |
| BmeT110I | CYCGRG | 2 cut(s) | 101, 159 |
| BmgT120I | GGNCC | 2 cut(s) | 157, 1292 |
| BmiI | GGNNCC | 4 cut(s) | 93, 673, 835, 1082 |
| BmrFI | CCNGG | 5 cut(s) | 44, 1035, 1295, 1451, 1901 |
| BmrI | ACTGGG | 3 cut(s) | 226, 828, 1398 |
| BmsI | GCATC | 6 cut(s) | 301, 343, 503, 1596, 1701, 1853 |
| BmtI | GCTAGC | 2 cut(s) | 29, 494 |
| BmuI | ACTGGG | 3 cut(s) | 226, 828, 1398 |
| BpiI | GAAGAC | 4 cut(s) | 415, 1042, 1415, 1845 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 422, 454 |
| Bpu14I | TTCGAA | 3 cut(s) | 1056, 1572, 1891 |
| BpuEI | CTTGAG | 3 cut(s) | 257, 305, 580 |
| BpuMI | CCSGG | 3 cut(s) | 44, 1295, 1901 |
| BsaI | GGTCTC | 2 cut(s) | 98, 1919 |
| BsaJI | CCNNGG | 2 cut(s) | 121, 878 |
| BsaWI | WCCGGW | 2 cut(s) | 1504, 1765 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 583, 613, 640, 670 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1486 |
| Bse1I | ACTGG | 4 cut(s) | 30, 221, 823, 1393 |
| Bse3DI | GCAATG | 1 cut(s) | 390 |
| BseBI | CCWGG | 2 cut(s) | 1035, 1451 |
| BseDI | CCNNGG | 2 cut(s) | 121, 878 |
| BseGI | GGATG | 6 cut(s) | 248, 494, 751, 1172, 1245, 1844 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1486 |
| BseMI | GCAATG | 1 cut(s) | 390 |
| BseMII | CTCAG | 3 cut(s) | 131, 743, 1478 |
| BseNI | ACTGG | 4 cut(s) | 30, 221, 823, 1393 |
| BseRI | GAGGAG | 2 cut(s) | 170, 308 |
| BseXI | GCAGC | 3 cut(s) | 29, 472, 1657 |
| BseYI | CCCAGC | 2 cut(s) | 225, 1486 |
| BsgI | GTGCAG | 1 cut(s) | 1249 |
| Bsh1236I | CGCG | 1 cut(s) | 132 |
| BshFI | GGCC | 5 cut(s) | 76, 158, 1293, 1354, 1449 |
| BshNI | GGYRCC | 1 cut(s) | 833 |
| BsiHKAI | GWGCWC | 2 cut(s) | 566, 1782 |
| BsiHKCI | CYCGRG | 2 cut(s) | 101, 159 |
| BsiSI | CCGG | 6 cut(s) | 43, 1176, 1295, 1505, 1766, 1900 |
| BslFI | GGGAC | 3 cut(s) | 539, 836, 1385 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1486 |
| BsmAI | GTCTC | 8 cut(s) | 98, 282, 353, 444, 586, 722, 1193, 1919 |
| BsmFI | GGGAC | 3 cut(s) | 539, 836, 1385 |
| BsnI | GGCC | 5 cut(s) | 76, 158, 1293, 1354, 1449 |
| Bso31I | GGTCTC | 2 cut(s) | 98, 1919 |
| BsoBI | CYCGRG | 2 cut(s) | 101, 159 |
| Bsp119I | TTCGAA | 3 cut(s) | 1056, 1572, 1891 |
| Bsp1286I | GDGCHC | 3 cut(s) | 146, 566, 1782 |
| Bsp143I | GATC | 6 cut(s) | 91, 263, 342, 1013, 1030, 1342 |
| BspANI | GGCC | 5 cut(s) | 76, 158, 1293, 1354, 1449 |
| BspCNI | CTCAG | 3 cut(s) | 132, 744, 1477 |
| BspFNI | CGCG | 1 cut(s) | 132 |
| BspLI | GGNNCC | 4 cut(s) | 93, 673, 835, 1082 |
| BspMAI | CTGCAG | 1 cut(s) | 1884 |
| BspOI | GCTAGC | 2 cut(s) | 29, 494 |
| BspPI | GGATC | 4 cut(s) | 86, 99, 1021, 1025 |
| BspQI | GCTCTTC | 1 cut(s) | 1269 |
| BspT104I | TTCGAA | 3 cut(s) | 1056, 1572, 1891 |
| BspT107I | GGYRCC | 1 cut(s) | 833 |
| BspTNI | GGTCTC | 2 cut(s) | 98, 1919 |
| BsrDI | GCAATG | 1 cut(s) | 390 |
| BsrI | ACTGG | 4 cut(s) | 30, 221, 823, 1393 |
| BssECI | CCNNGG | 2 cut(s) | 121, 878 |
| BssMI | GATC | 6 cut(s) | 91, 263, 342, 1013, 1030, 1342 |
| BssSI | CACGAG | 1 cut(s) | 152 |
| BssT1I | CCWWGG | 1 cut(s) | 878 |
| Bst2BI | CACGAG | 1 cut(s) | 152 |
| Bst2UI | CCWGG | 2 cut(s) | 1035, 1451 |
| Bst4CI | ACNGT | 3 cut(s) | 234, 568, 1621 |
| Bst6I | CTCTTC | 3 cut(s) | 851, 1269, 1752 |
| BstBI | TTCGAA | 3 cut(s) | 1056, 1572, 1891 |
| BstC8I | GCNNGC | 5 cut(s) | 27, 198, 492, 1356, 1611 |
| BstDEI | CTNAG | 4 cut(s) | 140, 752, 1464, 1677 |
| BstF5I | GGATG | 6 cut(s) | 248, 494, 751, 1172, 1245, 1844 |
| BstFNI | CGCG | 1 cut(s) | 132 |
| BstH2I | RGCGCY | 1 cut(s) | 1263 |
| BstHHI | GCGC | 2 cut(s) | 490, 1262 |
| BstKTI | GATC | 6 cut(s) | 94, 266, 345, 1016, 1033, 1345 |
| BstMAI | GTCTC | 8 cut(s) | 98, 282, 353, 444, 586, 722, 1193, 1919 |
| BstMBI | GATC | 6 cut(s) | 91, 263, 342, 1013, 1030, 1342 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 14, 26, 126, 491, 1259, 1695, 1879 |
| BstNI | CCWGG | 2 cut(s) | 1035, 1451 |
| BstNSI | RCATGY | 2 cut(s) | 1332, 1486 |
| BstSCI | CCNGG | 5 cut(s) | 42, 1033, 1293, 1449, 1899 |
| BstSFI | CTRYAG | 1 cut(s) | 1880 |
| BstUI | CGCG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 3 cut(s) | 29, 472, 1657 |
| BstV2I | GAAGAC | 4 cut(s) | 415, 1042, 1415, 1845 |
| BstX2I | RGATCY | 2 cut(s) | 91, 1342 |
| BstYI | RGATCY | 2 cut(s) | 91, 1342 |
| BsuRI | GGCC | 5 cut(s) | 76, 158, 1293, 1354, 1449 |
| BtsCI | GGATG | 6 cut(s) | 248, 494, 751, 1172, 1245, 1844 |
| BtsIMutI | CAGTG | 2 cut(s) | 137, 1023 |
| Cac8I | GCNNGC | 5 cut(s) | 27, 198, 492, 1356, 1611 |
| CfoI | GCGC | 2 cut(s) | 490, 1262 |
| Cfr13I | GGNCC | 2 cut(s) | 157, 1292 |
| CseI | GACGC | 1 cut(s) | 1760 |
| Csp6I | GTAC | 1 cut(s) | 834 |
| CviAII | CATG | 9 cut(s) | 87, 461, 781, 1063, 1130, 1329, 1483, 1700, 1724 |
| CviQI | GTAC | 1 cut(s) | 834 |
| DdeI | CTNAG | 4 cut(s) | 140, 752, 1464, 1677 |
| DpnI | GATC | 6 cut(s) | 93, 265, 344, 1015, 1032, 1344 |
| DpnII | GATC | 6 cut(s) | 91, 263, 342, 1013, 1030, 1342 |
| Eam1104I | CTCTTC | 3 cut(s) | 851, 1269, 1752 |
| EarI | CTCTTC | 3 cut(s) | 851, 1269, 1752 |
| EciI | GGCGGA | 1 cut(s) | 943 |
| Eco130I | CCWWGG | 1 cut(s) | 878 |
| Eco147I | AGGCCT | 1 cut(s) | 1354 |
| Eco24I | GRGCYC | 1 cut(s) | 146 |
| Eco31I | GGTCTC | 2 cut(s) | 98, 1919 |
| Eco57I | CTGAAG | 4 cut(s) | 409, 1250, 1757, 1776 |
| Eco88I | CYCGRG | 2 cut(s) | 101, 159 |
| EcoRI | GAATTC | 1 cut(s) | 1058 |
| EcoRII | CCWGG | 2 cut(s) | 1033, 1449 |
| EcoT14I | CCWWGG | 1 cut(s) | 878 |
| EcoT38I | GRGCYC | 1 cut(s) | 146 |
| ErhI | CCWWGG | 1 cut(s) | 878 |
| FaeI | CATG | 9 cut(s) | 90, 464, 784, 1066, 1133, 1332, 1486, 1703, 1727 |
| FaqI | GGGAC | 3 cut(s) | 539, 836, 1385 |
| FatI | CATG | 9 cut(s) | 86, 460, 780, 1062, 1129, 1328, 1482, 1699, 1723 |
| FauI | CCCGC | 2 cut(s) | 299, 962 |
| Fnu4HI | GCNGC | 7 cut(s) | 18, 130, 486, 1180, 1566, 1671, 1690 |
| FokI | GGATG | 6 cut(s) | 235, 481, 758, 1159, 1252, 1831 |
| FriOI | GRGCYC | 1 cut(s) | 146 |
| Fsp4HI | GCNGC | 7 cut(s) | 18, 130, 486, 1180, 1566, 1671, 1690 |
| FspBI | CTAG | 5 cut(s) | 26, 491, 717, 866, 879 |
| GlaI | GCGC | 2 cut(s) | 489, 1261 |
| GluI | GCNGC | 7 cut(s) | 18, 130, 486, 1180, 1566, 1671, 1690 |
| GsaI | CCCAGC | 2 cut(s) | 229, 1490 |
| HaeII | RGCGCY | 1 cut(s) | 1263 |
| HaeIII | GGCC | 5 cut(s) | 76, 158, 1293, 1354, 1449 |
| HapII | CCGG | 6 cut(s) | 43, 1176, 1295, 1505, 1766, 1900 |
| HgaI | GACGC | 1 cut(s) | 1760 |
| HhaI | GCGC | 2 cut(s) | 490, 1262 |
| Hin1II | CATG | 9 cut(s) | 90, 464, 784, 1066, 1133, 1332, 1486, 1703, 1727 |
| Hin6I | GCGC | 2 cut(s) | 488, 1260 |
| HinP1I | GCGC | 2 cut(s) | 488, 1260 |
| HincII | GTYRAC | 2 cut(s) | 816, 1456 |
| HindII | GTYRAC | 2 cut(s) | 816, 1456 |
| HinfI | GANTC | 7 cut(s) | 79, 134, 541, 1117, 1712, 1718, 1762 |
| HpaI | GTTAAC | 1 cut(s) | 816 |
| HpaII | CCGG | 6 cut(s) | 43, 1176, 1295, 1505, 1766, 1900 |
| HphI | GGTGA | 3 cut(s) | 179, 247, 1255 |
| Hpy166II | GTNNAC | 3 cut(s) | 697, 816, 1456 |
| Hpy188I | TCNGA | 9 cut(s) | 499, 661, 727, 922, 981, 1190, 1441, 1467, 1717 |
| Hpy188III | TCNNGA | 8 cut(s) | 101, 103, 337, 350, 717, 1006, 1268, 1863 |
| Hpy8I | GTNNAC | 3 cut(s) | 697, 816, 1456 |
| Hpy99I | CGWCG | 1 cut(s) | 16 |
| HpyAV | CCTTC | 5 cut(s) | 105, 184, 247, 517, 1529 |
| HpyCH4III | ACNGT | 3 cut(s) | 234, 568, 1621 |
| HpyCH4IV | ACGT | 1 cut(s) | 825 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 14, 26, 126, 491, 1259, 1695, 1879 |
| HpyF3I | CTNAG | 4 cut(s) | 140, 752, 1464, 1677 |
| HpySE526I | ACGT | 1 cut(s) | 825 |
| Hsp92II | CATG | 9 cut(s) | 90, 464, 784, 1066, 1133, 1332, 1486, 1703, 1727 |
| HspAI | GCGC | 2 cut(s) | 488, 1260 |
| KpnI | GGTACC | 1 cut(s) | 837 |
| KspAI | GTTAAC | 1 cut(s) | 816 |
| Kzo9I | GATC | 6 cut(s) | 91, 263, 342, 1013, 1030, 1342 |
| LguI | GCTCTTC | 1 cut(s) | 1269 |
| LmnI | GCTCC | 4 cut(s) | 22, 374, 677, 880 |
| Lsp1109I | GCAGC | 3 cut(s) | 29, 472, 1657 |
| LweI | GCATC | 6 cut(s) | 301, 343, 503, 1596, 1701, 1853 |
| MaeI | CTAG | 5 cut(s) | 26, 491, 717, 866, 879 |
| MaeII | ACGT | 1 cut(s) | 825 |
| MaeIII | GTNAC | 4 cut(s) | 470, 1680, 1705, 1726 |
| MalI | GATC | 6 cut(s) | 93, 265, 344, 1015, 1032, 1344 |
| MboI | GATC | 6 cut(s) | 91, 263, 342, 1013, 1030, 1342 |
| MfeI | CAATTG | 1 cut(s) | 1026 |
| MflI | RGATCY | 2 cut(s) | 91, 1342 |
| MhlI | GDGCHC | 3 cut(s) | 146, 566, 1782 |
| MlyI | GAGTC | 4 cut(s) | 73, 128, 535, 1721 |
| MmeI | TCCRAC | 2 cut(s) | 87, 1048 |
| MroXI | GAANNNNTTC | 3 cut(s) | 807, 1158, 1761 |
| MseI | TTAA | 5 cut(s) | 546, 666, 815, 1581, 1785 |
| MspA1I | CMGCKG | 2 cut(s) | 20, 1832 |
| MspI | CCGG | 6 cut(s) | 43, 1176, 1295, 1505, 1766, 1900 |
| MspR9I | CCNGG | 5 cut(s) | 44, 1035, 1295, 1451, 1901 |
| MunI | CAATTG | 1 cut(s) | 1026 |
| MvaI | CCWGG | 2 cut(s) | 1035, 1451 |
| MvnI | CGCG | 1 cut(s) | 132 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 14, 26, 126, 491, 1259, 1695, 1879 |
| NciI | CCSGG | 3 cut(s) | 44, 1295, 1901 |
| NdeII | GATC | 6 cut(s) | 91, 263, 342, 1013, 1030, 1342 |
| NheI | GCTAGC | 2 cut(s) | 25, 490 |
| NlaIII | CATG | 9 cut(s) | 90, 464, 784, 1066, 1133, 1332, 1486, 1703, 1727 |
| NlaIV | GGNNCC | 4 cut(s) | 93, 673, 835, 1082 |
| NmeAIII | GCCGAG | 2 cut(s) | 183, 1019 |
| NspI | RCATGY | 2 cut(s) | 1332, 1486 |
| NspV | TTCGAA | 3 cut(s) | 1056, 1572, 1891 |
| PaeR7I | CTCGAG | 1 cut(s) | 101 |
| PceI | AGGCCT | 1 cut(s) | 1354 |
| PciSI | GCTCTTC | 1 cut(s) | 1269 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 129 |
| PdmI | GAANNNNTTC | 3 cut(s) | 807, 1158, 1761 |
| PfeI | GAWTC | 3 cut(s) | 1117, 1718, 1762 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1486 |
| PfoI | TCCNGGA | 1 cut(s) | 1899 |
| PkrI | GCNGC | 7 cut(s) | 19, 131, 487, 1181, 1567, 1672, 1691 |
| PleI | GAGTC | 4 cut(s) | 73, 128, 535, 1720 |
| PpsI | GAGTC | 4 cut(s) | 73, 128, 535, 1720 |
| Psp6I | CCWGG | 2 cut(s) | 1033, 1449 |
| PspFI | CCCAGC | 2 cut(s) | 225, 1486 |
| PspGI | CCWGG | 2 cut(s) | 1033, 1449 |
| PspN4I | GGNNCC | 4 cut(s) | 93, 673, 835, 1082 |
| PspPI | GGNCC | 2 cut(s) | 157, 1292 |
| PstI | CTGCAG | 1 cut(s) | 1884 |
| PsuI | RGATCY | 2 cut(s) | 91, 1342 |
| PvuII | CAGCTG | 1 cut(s) | 1832 |
| RsaI | GTAC | 1 cut(s) | 835 |
| RsaNI | GTAC | 1 cut(s) | 834 |
| SapI | GCTCTTC | 1 cut(s) | 1269 |
| SaqAI | TTAA | 5 cut(s) | 546, 666, 815, 1581, 1785 |
| SatI | GCNGC | 7 cut(s) | 18, 130, 486, 1180, 1566, 1671, 1690 |
| Sau3AI | GATC | 6 cut(s) | 91, 263, 342, 1013, 1030, 1342 |
| Sau96I | GGNCC | 2 cut(s) | 157, 1292 |
| SchI | GAGTC | 4 cut(s) | 73, 128, 535, 1721 |
| ScrFI | CCNGG | 5 cut(s) | 44, 1035, 1295, 1451, 1901 |
| SduI | GDGCHC | 3 cut(s) | 146, 566, 1782 |
| SfaNI | GCATC | 6 cut(s) | 301, 343, 503, 1596, 1701, 1853 |
| SfcI | CTRYAG | 1 cut(s) | 1880 |
| Sfr274I | CTCGAG | 1 cut(s) | 101 |
| SfuI | TTCGAA | 3 cut(s) | 1056, 1572, 1891 |
| SlaI | CTCGAG | 1 cut(s) | 101 |
| SmlI | CTYRAG | 4 cut(s) | 101, 272, 320, 559 |
| SmoI | CTYRAG | 4 cut(s) | 101, 272, 320, 559 |
| SseBI | AGGCCT | 1 cut(s) | 1354 |
| SspMI | CTAG | 5 cut(s) | 26, 491, 717, 866, 879 |
| StuI | AGGCCT | 1 cut(s) | 1354 |
| StyD4I | CCNGG | 5 cut(s) | 42, 1033, 1293, 1449, 1899 |
| StyI | CCWWGG | 1 cut(s) | 878 |
| TaaI | ACNGT | 3 cut(s) | 234, 568, 1621 |
| TaiI | ACGT | 1 cut(s) | 828 |
| TauI | GCSGC | 4 cut(s) | 132, 1182, 1568, 1692 |
| TfiI | GAWTC | 3 cut(s) | 1117, 1718, 1762 |
| Tru1I | TTAA | 5 cut(s) | 546, 666, 815, 1581, 1785 |
| Tru9I | TTAA | 5 cut(s) | 546, 666, 815, 1581, 1785 |
| TscAI | CASTG | 2 cut(s) | 144, 1023 |
| TseI | GCWGC | 3 cut(s) | 17, 485, 1670 |
| TspDTI | ATGAA | 5 cut(s) | 17, 549, 769, 892, 1051 |
| TspGWI | ACGGA | 4 cut(s) | 361, 664, 1413, 1418 |
| TspRI | CASTG | 2 cut(s) | 144, 1023 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1486 |
| XapI | RAATTY | 3 cut(s) | 621, 973, 1058 |
| XbaI | TCTAGA | 1 cut(s) | 716 |
| XceI | RCATGY | 2 cut(s) | 1332, 1486 |
| XhoI | CTCGAG | 1 cut(s) | 101 |
| XmaJI | CCTAGG | 1 cut(s) | 878 |
| XmnI | GAANNNNTTC | 3 cut(s) | 807, 1158, 1761 |
| XspI | CTAG | 5 cut(s) | 26, 491, 717, 866, 879 |