Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0008502

Physical Location & Seq

Genomic Coordinates Forward (+)

8068301 .. 8074379

Gene Structure 6079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1109000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGCTAACACACCCTCGCCACCACTGTGTCAGGCTCTGCGTAACTGCTAAGCGAATTTTCTGTAGTCGACAGAGAGCAAACAAACGAGCATCAATGGCTGAACCCAAAACCAAATACGATCGCCAGCTCAGAATCTGGGGCGAGCAAGGGCAGACAGCCCTAGAGAAGGCCAGCGTATGCCTACTGAATTGTGGCCCCACCGGCTCCGAGACCCTGAAGAACCTTGTTCTTGGCGGGGTTGGAAGCATCACCGTCATCGATGGATCTAAAGTCGAACCGGGTGACCTCGGAAATAACTTCATGGTTGATGAATCGAGCGTTGGGAAATCGAAAGCGAAATGCGTTTGCCAGTTTCTTCAGGAGTTGAATGATGCCGTGAAGGCGAAGTTTATCGAAGAGTATCCGGAGGTTTTGATTGAGACTAACCCATCGTTCTTTTCTCAGTTTACCTTGGTTGTGGCTACTCAGCTAGGGGAAAGTTCAATGGTAAAGCTTGATAGAATCTGCAGGGAGGCAAATGTGATACTGATCTTTGCTCGCTCTTATGGCCTAACTGGGCTTGTCCGTATCAGTTTGAAGGAGCATACTGTGATTGAGTCAAAACCTGAACATTTTCTGGATGACCTTCGTTTAAATAATCCATGGCCGGAGCTTAAAAGGTACGCGGAAACTATTGATCTGGACGTGTCAGATCCTGTTGCCCACAAGCACACGCCATACGTCCTCATTCTTGTCAAGATGGCAGAGGAGTGGGAAAAAAATCATGATGGTAAACTTCCATCAACTAGGGAAGAGAAAAAAGAGTTCAAGGAGCTTATTAAAGCCAGGATGACTGCACTAGATGAAGATAACTATAAAGAAGCCATTGAGGCCTCTTTCAAAGTCTTTACTCCACGAGGAATTAGTTCTGACTTGCAACAGGTAATTGAAGATAGCTGTGTGGAAATAGATTCCAGCTCGTCTGATTTTTGGGTGATGGTGGCAGCGTTGAAGGAATTCATAGAAAATGAAGGTGGCGGCGAGGCACCCCTCGAAGGATCAATACCAGACATGACATCTTCGACAGAGCACTATATATCTTTACAGAAACTCTACCAAGCCAAGGCTGAGGCTGATTATCTCGTTATTGAGCAAAGGGTTAGGACTATTCTGAAAAAAATTGGTAGAGATCCAAACAGCATCTCAAAGACAACCATAAAAAGTTTATGCAAGAATGCAAGAAAACTCAAAGTTTGCAGGTATCGCCTAGTTGAAGATGAGTTCAATTCTCCAACCGTACCAGAGTTGCAGAAGTATCTAACAGATGAGGATTACAGCGTAGCCAGTGTGTTTTATGTTTTGCTTAGAGCTGTCGATCGATTTGCTGCCAATTACAACAGTTTTCCTGGGCAATTTGACGGTTTAATGGATGAGGACATATCTCGATTGAAGACTACCGCTGTTGGCCTGCTTAATGACGTGGGCTGCAATGGCGTAACATTAACTGAGGACCTTATCAATGAGATGTGTCGATTTGGTGCTGCCGAGCTCCACGCAGTCGCTGCTTTCATTGGAGGAATTGCATCTCAGGAAGTGATTAAGCTTATAACAAGACAGTTTGTGCCCTTGTCCGGAACTTTTGTCTTCAACGGCATTGATCATAAGTCTCAATTGTTGTCTCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006310 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007127 GO:0007131 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008641 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009735 GO:0009755 GO:0009791 GO:0009965 GO:0009987 GO:0010016 GO:0010033 GO:0010035 GO:0010252 GO:0016043 GO:0016874 GO:0016877 GO:0019538 GO:0019781 GO:0022402 GO:0022414 GO:0023052 GO:0032446 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0034641 GO:0035825 GO:0036211 GO:0042221 GO:0042579 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045116 GO:0046483 GO:0048285 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051321 GO:0051716 GO:0061982 GO:0065007 GO:0065008 GO:0070647 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0071840 GO:0090304 GO:0099402 GO:0140013 GO:1901360 GO:1901564 GO:1901700 GO:1903046 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko05010 map05010

Pfam Domains

Protein Families

ThiF

Protein Analysis

555

Amino Acids

62.06

Weight (kDa)

5.73

Isoelectric Point (pI)

35.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ThiF	PF00899	39 - 539	3.9e-25	ThiF family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008502)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05180 AT1G05180 AT1G05180 AT2G32410
fragaria_vesca	FvH4_6g43170 FvH4_6g43170 FvH4_6g43170
malus_domestica	MD09G1109000.v1.1 MD17G1097000.v1.1
prunus_persica	Prupe.3G217100_v2.0.a1
pyrus_communis	pycom09g03150 pycom17g09280
rosa_chinensis	RchiOBHm_Chr2g0159271
rosa_laevigata	RLG00000021149
rosa_multiflora	Rmu_sc0016200.1_g000007
rosa_roxburghii	Rroxscaffold_2G00090640
rosa_rugosa	Rorug02G0475500 Rorug02G0475500 Rorug02G0475600
rosa_samantha	Rh2AG541900 Rh2CG524600 Rh2DG564300
rosa_wichuraiana	Rw2G044820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1586
Acc36I	ACCTGC	1 cut(s)	1227
AccB1I	GGYRCC	1 cut(s)	1024
AccI	GTMKAC	1 cut(s)	67
AccII	CGCG	1 cut(s)	665
AccIII	TCCGGA	2 cut(s)	403, 1610
AciI	CCGC	4 cut(s)	234, 665, 1017, 1437
AclWI	GGATC	4 cut(s)	271, 686, 1045, 1163
AcoI	YGGCCR	1 cut(s)	644
AcsI	RAATTY	2 cut(s)	54, 995
AcuI	CTGAAG	2 cut(s)	236, 341
AfaI	GTAC	2 cut(s)	662, 1278
AfiI	CCNNNNNNNGG	4 cut(s)	166, 1034, 1102, 1610
AflIII	ACRYGT	1 cut(s)	684
AjiI	CACGTC	2 cut(s)	685, 1459
AjnI	CCWGG	2 cut(s)	824, 1384
AjuI	GAANNNNNNNTTGG	2 cut(s)	303, 335
AleI	CACNNNNGTG	1 cut(s)	24
Alw21I	GWGCWC	2 cut(s)	1071, 1530
Alw26I	GTCTC	3 cut(s)	203, 413, 1650
AlwI	GGATC	4 cut(s)	271, 686, 1045, 1163
AlwNI	CAGNNNCTG	4 cut(s)	36, 135, 695, 1541
Aor13HI	TCCGGA	2 cut(s)	403, 1610
AoxI	GGCC	6 cut(s)	168, 193, 547, 644, 870, 1444
ApeKI	GCWGC	5 cut(s)	983, 1364, 1464, 1520, 1541
ApoI	RAATTY	2 cut(s)	54, 995
Asp700I	GAANNNNTTC	3 cut(s)	612, 904, 995
AspS9I	GGNCC	2 cut(s)	194, 1489
AsuC2I	CCSGG	1 cut(s)	279
AsuHPI	GGTGA	3 cut(s)	241, 293, 985
AvaII	GGWCC	1 cut(s)	1489
BaeGI	GKGCMC	1 cut(s)	1605
BanI	GGYRCC	1 cut(s)	1024
BanII	GRGCYC	1 cut(s)	1530
BarI	GAAGNNNNNNTAC	2 cut(s)	1026, 1058
BauI	CACGAG	1 cut(s)	894
BbsI	GAAGAC	2 cut(s)	1436, 1615
Bbv12I	GWGCWC	2 cut(s)	1071, 1530
BbvCI	CCTCAGC	1 cut(s)	1107
BbvI	GCAGC	5 cut(s)	995, 1351, 1451, 1507, 1528
BccI	CCATC	6 cut(s)	254, 436, 733, 761, 787, 970
BceAI	ACGGC	2 cut(s)	359, 1645
BcgI	CGANNNNNNTGC	2 cut(s)	1343, 1377
BciT130I	CCWGG	2 cut(s)	826, 1386
BciVI	GTATCC	1 cut(s)	411
BclI	TGATCA	1 cut(s)	1636
BcnI	CCSGG	1 cut(s)	279
BcoDI	GTCTC	3 cut(s)	203, 413, 1650
BfaI	CTAG	5 cut(s)	161, 470, 786, 839, 1247
BfmI	CTRYAG	3 cut(s)	61, 505, 1661
BfuAI	ACCTGC	1 cut(s)	1227
BfuI	GTATCC	1 cut(s)	411
BglI	GCCNNNNNGGC	3 cut(s)	201, 380, 869
BisI	GCNGC	6 cut(s)	984, 1018, 1365, 1465, 1521, 1542
BlpI	GCTNAGC	1 cut(s)	48
BlsI	GCNGC	6 cut(s)	985, 1019, 1366, 1466, 1522, 1543
Bme1390I	CCNGG	3 cut(s)	279, 826, 1386
Bme18I	GGWCC	1 cut(s)	1489
BmgBI	CACGTC	2 cut(s)	685, 1459
BmgT120I	GGNCC	2 cut(s)	194, 1489
BmiI	GGNNCC	3 cut(s)	196, 205, 1026
BmrFI	CCNGG	3 cut(s)	279, 826, 1386
BmrI	ACTGGG	1 cut(s)	564
BmsI	GCATC	5 cut(s)	98, 255, 361, 1188, 1571
BmuI	ACTGGG	1 cut(s)	564
BpiI	GAAGAC	2 cut(s)	1436, 1615
Bpu10I	CCTNAGC	1 cut(s)	1107
Bpu1102I	GCTNAGC	1 cut(s)	48
BpuMI	CCSGG	1 cut(s)	279
Bsa29I	ATCGAT	2 cut(s)	258, 1357
BsaBI	GATNNNNATC	1 cut(s)	527
BsaI	GGTCTC	1 cut(s)	203
BsaJI	CCNNGG	5 cut(s)	286, 450, 641, 1101, 1385
BsaWI	WCCGGW	2 cut(s)	403, 1610
Bsc4I	CCNNNNNNNGG	4 cut(s)	166, 1034, 1102, 1610
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	3 cut(s)	349, 559, 1323
Bse3DI	GCAATG	1 cut(s)	1474
Bse8I	GATNNNNATC	1 cut(s)	527
BseAI	TCCGGA	2 cut(s)	403, 1610
BseBI	CCWGG	2 cut(s)	826, 1386
BseCI	ATCGAT	2 cut(s)	258, 1357
BseDI	CCNNGG	5 cut(s)	286, 450, 641, 1101, 1385
BseGI	GGATG	3 cut(s)	625, 834, 1414
BseJI	GATNNNNATC	1 cut(s)	527
BseLI	CCNNNNNNNGG	4 cut(s)	166, 1034, 1102, 1610
BseMI	GCAATG	1 cut(s)	1474
BseMII	CTCAG	6 cut(s)	142, 455, 479, 1098, 1476, 1580
BseNI	ACTGG	3 cut(s)	349, 559, 1323
BseRI	GAGGAG	1 cut(s)	761
BseSI	GKGCMC	1 cut(s)	1605
BseXI	GCAGC	5 cut(s)	995, 1351, 1451, 1507, 1528
BsgI	GTGCAG	1 cut(s)	819
Bsh1236I	CGCG	1 cut(s)	665
Bsh1285I	CGRYCG	2 cut(s)	121, 1357
BshFI	GGCC	6 cut(s)	170, 195, 549, 646, 872, 1446
BshNI	GGYRCC	1 cut(s)	1024
BshVI	ATCGAT	2 cut(s)	258, 1357
BsiEI	CGRYCG	2 cut(s)	121, 1357
BsiHKAI	GWGCWC	2 cut(s)	1071, 1530
BsiSI	CCGG	5 cut(s)	201, 278, 404, 647, 1611
BslI	CCNNNNNNNGG	4 cut(s)	166, 1034, 1102, 1610
BsmAI	GTCTC	3 cut(s)	203, 413, 1650
BsmI	GAATGC	1 cut(s)	1219
BsnI	GGCC	6 cut(s)	170, 195, 549, 646, 872, 1446
Bso31I	GGTCTC	1 cut(s)	203
Bsp1286I	GDGCHC	3 cut(s)	1071, 1530, 1605
Bsp13I	TCCGGA	2 cut(s)	403, 1610
Bsp143I	GATC	9 cut(s)	118, 263, 528, 676, 691, 1037, 1168, 1354, 1636
Bsp1720I	GCTNAGC	1 cut(s)	48
Bsp19I	CCATGG	1 cut(s)	641
BspACI	CCGC	4 cut(s)	234, 665, 1017, 1437
BspANI	GGCC	6 cut(s)	170, 195, 549, 646, 872, 1446
BspCNI	CTCAG	6 cut(s)	141, 454, 478, 1099, 1477, 1579
BspDI	ATCGAT	2 cut(s)	258, 1357
BspEI	TCCGGA	2 cut(s)	403, 1610
BspFNI	CGCG	1 cut(s)	665
BspHI	TCATGA	1 cut(s)	763
BspLI	GGNNCC	3 cut(s)	196, 205, 1026
BspMAI	CTGCAG	1 cut(s)	509
BspMI	ACCTGC	1 cut(s)	1227
BspPI	GGATC	4 cut(s)	271, 686, 1045, 1163
BspT107I	GGYRCC	1 cut(s)	1024
BspTNI	GGTCTC	1 cut(s)	203
BsrDI	GCAATG	1 cut(s)	1474
BsrFI	RCCGGY	1 cut(s)	200
BsrI	ACTGG	3 cut(s)	349, 559, 1323
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	5 cut(s)	286, 450, 641, 1101, 1385
BssMI	GATC	9 cut(s)	118, 263, 528, 676, 691, 1037, 1168, 1354, 1636
BssSI	CACGAG	1 cut(s)	894
BssT1I	CCWWGG	3 cut(s)	450, 641, 1101
Bst2BI	CACGAG	1 cut(s)	894
Bst2UI	CCWGG	2 cut(s)	826, 1386
Bst4CI	ACNGT	7 cut(s)	26, 253, 589, 1276, 1379, 1400, 1596
Bst6I	CTCTTC	2 cut(s)	390, 786
BstAPI	GCANNNNNTGC	1 cut(s)	1541
BstC8I	GCNNGC	5 cut(s)	125, 143, 172, 538, 1448
BstDEI	CTNAG	8 cut(s)	48, 128, 441, 465, 1107, 1343, 1485, 1566
BstDSI	CCRYGG	1 cut(s)	641
BstEII	GGTNACC	1 cut(s)	281
BstENI	CCTNNNNNAGG	1 cut(s)	164
BstF5I	GGATG	3 cut(s)	625, 834, 1414
BstFNI	CGCG	1 cut(s)	665
BstKTI	GATC	9 cut(s)	121, 266, 531, 679, 694, 1040, 1171, 1357, 1639
BstMAI	GTCTC	3 cut(s)	203, 413, 1650
BstMBI	GATC	9 cut(s)	118, 263, 528, 676, 691, 1037, 1168, 1354, 1636
BstMCI	CGRYCG	2 cut(s)	121, 1357
BstMWI	GCNNNNNNNGC	8 cut(s)	95, 201, 380, 546, 869, 1242, 1470, 1541
BstNI	CCWGG	2 cut(s)	826, 1386
BstPI	GGTNACC	1 cut(s)	281
BstSCI	CCNGG	3 cut(s)	277, 824, 1384
BstSFI	CTRYAG	3 cut(s)	61, 505, 1661
BstSLI	GKGCMC	1 cut(s)	1605
BstUI	CGCG	1 cut(s)	665
BstV1I	GCAGC	5 cut(s)	995, 1351, 1451, 1507, 1528
BstV2I	GAAGAC	2 cut(s)	1436, 1615
BstX2I	RGATCY	3 cut(s)	263, 691, 1168
BstYI	RGATCY	3 cut(s)	263, 691, 1168
Bsu15I	ATCGAT	2 cut(s)	258, 1357
BsuI	GTATCC	1 cut(s)	411
BsuRI	GGCC	6 cut(s)	170, 195, 549, 646, 872, 1446
BsuTUI	ATCGAT	2 cut(s)	258, 1357
BtgI	CCRYGG	1 cut(s)	641
BtrI	CACGTC	2 cut(s)	685, 1459
BtsCI	GGATG	3 cut(s)	625, 834, 1414
BtsIMutI	CAGTG	2 cut(s)	22, 1330
BveI	ACCTGC	1 cut(s)	1227
Cac8I	GCNNGC	5 cut(s)	125, 143, 172, 538, 1448
CaiI	CAGNNNCTG	4 cut(s)	36, 135, 695, 1541
CciI	TCATGA	1 cut(s)	763
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	2 cut(s)	194, 1489
ClaI	ATCGAT	2 cut(s)	258, 1357
Csp6I	GTAC	2 cut(s)	661, 1277
CviAII	CATG	4 cut(s)	301, 642, 764, 1051
CviQI	GTAC	2 cut(s)	661, 1277
DdeI	CTNAG	8 cut(s)	48, 128, 441, 465, 1107, 1343, 1485, 1566
DpnI	GATC	9 cut(s)	120, 265, 530, 678, 693, 1039, 1170, 1356, 1638
DpnII	GATC	9 cut(s)	118, 263, 528, 676, 691, 1037, 1168, 1354, 1636
DraI	TTTAAA	1 cut(s)	633
EaeI	YGGCCR	1 cut(s)	644
Eam1104I	CTCTTC	2 cut(s)	390, 786
EarI	CTCTTC	2 cut(s)	390, 786
Ecl136II	GAGCTC	1 cut(s)	1528
Eco130I	CCWWGG	3 cut(s)	450, 641, 1101
Eco147I	AGGCCT	1 cut(s)	872
Eco24I	GRGCYC	1 cut(s)	1530
Eco31I	GGTCTC	1 cut(s)	203
Eco47I	GGWCC	1 cut(s)	1489
Eco53kI	GAGCTC	1 cut(s)	1528
Eco57I	CTGAAG	2 cut(s)	236, 341
Eco91I	GGTNACC	1 cut(s)	281
EcoICRI	GAGCTC	1 cut(s)	1528
EcoNI	CCTNNNNNAGG	1 cut(s)	164
EcoO109I	RGGNCCY	1 cut(s)	1489
EcoO65I	GGTNACC	1 cut(s)	281
EcoRI	GAATTC	1 cut(s)	995
EcoRII	CCWGG	2 cut(s)	824, 1384
EcoT14I	CCWWGG	3 cut(s)	450, 641, 1101
EcoT38I	GRGCYC	1 cut(s)	1530
ErhI	CCWWGG	3 cut(s)	450, 641, 1101
FaeI	CATG	4 cut(s)	304, 645, 767, 1054
FatI	CATG	4 cut(s)	300, 641, 763, 1050
FauI	CCCGC	1 cut(s)	227
FbaI	TGATCA	1 cut(s)	1636
FblI	GTMKAC	1 cut(s)	67
Fnu4HI	GCNGC	6 cut(s)	984, 1018, 1365, 1465, 1521, 1542
FokI	GGATG	3 cut(s)	632, 841, 1421
FriOI	GRGCYC	1 cut(s)	1530
Fsp4HI	GCNGC	6 cut(s)	984, 1018, 1365, 1465, 1521, 1542
FspBI	CTAG	5 cut(s)	161, 470, 786, 839, 1247
GluI	GCNGC	6 cut(s)	984, 1018, 1365, 1465, 1521, 1542
HaeIII	GGCC	6 cut(s)	170, 195, 549, 646, 872, 1446
HapII	CCGG	5 cut(s)	201, 278, 404, 647, 1611
Hin1II	CATG	4 cut(s)	304, 645, 767, 1054
HincII	GTYRAC	1 cut(s)	68
HindII	GTYRAC	1 cut(s)	68
HindIII	AAGCTT	2 cut(s)	491, 1580
HinfI	GANTC	5 cut(s)	132, 311, 501, 596, 950
HpaII	CCGG	5 cut(s)	201, 278, 404, 647, 1611
HphI	GGTGA	3 cut(s)	241, 293, 985
Hpy166II	GTNNAC	3 cut(s)	68, 447, 773
Hpy188I	TCNGA	7 cut(s)	131, 208, 290, 691, 910, 964, 1152
Hpy188III	TCNNGA	9 cut(s)	359, 404, 617, 680, 736, 764, 1422, 1568, 1611
Hpy8I	GTNNAC	3 cut(s)	68, 447, 773
HpyAV	CCTTC	7 cut(s)	160, 373, 571, 635, 985, 1004, 1028
HpyCH4III	ACNGT	7 cut(s)	26, 253, 589, 1276, 1379, 1400, 1596
HpyCH4IV	ACGT	3 cut(s)	684, 720, 1458
HpyCH4V	TGCA	9 cut(s)	507, 836, 916, 1209, 1217, 1236, 1288, 1467, 1562
HpyF10VI	GCNNNNNNNGC	8 cut(s)	95, 201, 380, 546, 869, 1242, 1470, 1541
HpyF3I	CTNAG	8 cut(s)	48, 128, 441, 465, 1107, 1343, 1485, 1566
HpySE526I	ACGT	3 cut(s)	684, 720, 1458
Hsp92II	CATG	4 cut(s)	304, 645, 767, 1054
Kpn2I	TCCGGA	2 cut(s)	403, 1610
Ksp22I	TGATCA	1 cut(s)	1636
Kzo9I	GATC	9 cut(s)	118, 263, 528, 676, 691, 1037, 1168, 1354, 1636
LmnI	GCTCC	5 cut(s)	209, 580, 649, 811, 1533
Lsp1109I	GCAGC	5 cut(s)	995, 1351, 1451, 1507, 1528
LweI	GCATC	5 cut(s)	98, 255, 361, 1188, 1571
MaeI	CTAG	5 cut(s)	161, 470, 786, 839, 1247
MaeII	ACGT	3 cut(s)	684, 720, 1458
MaeIII	GTNAC	3 cut(s)	40, 281, 1474
MalI	GATC	9 cut(s)	120, 265, 530, 678, 693, 1039, 1170, 1356, 1638
MboI	GATC	9 cut(s)	118, 263, 528, 676, 691, 1037, 1168, 1354, 1636
MfeI	CAATTG	1 cut(s)	1649
MflI	RGATCY	3 cut(s)	263, 691, 1168
MhlI	GDGCHC	3 cut(s)	1071, 1530, 1605
MlyI	GAGTC	1 cut(s)	605
MmeI	TCCRAC	2 cut(s)	220, 1295
MroI	TCCGGA	2 cut(s)	403, 1610
MroXI	GAANNNNTTC	3 cut(s)	612, 904, 995
MseI	TTAA	7 cut(s)	632, 654, 819, 1403, 1452, 1481, 1578
MslI	CAYNNNNRTG	1 cut(s)	24
MspA1I	CMGCKG	1 cut(s)	1439
MspI	CCGG	5 cut(s)	201, 278, 404, 647, 1611
MspR9I	CCNGG	3 cut(s)	279, 826, 1386
MunI	CAATTG	1 cut(s)	1649
Mva1269I	GAATGC	1 cut(s)	1219
MvaI	CCWGG	2 cut(s)	826, 1386
MvnI	CGCG	1 cut(s)	665
MwoI	GCNNNNNNNGC	8 cut(s)	95, 201, 380, 546, 869, 1242, 1470, 1541
NciI	CCSGG	1 cut(s)	279
NcoI	CCATGG	1 cut(s)	641
NdeII	GATC	9 cut(s)	118, 263, 528, 676, 691, 1037, 1168, 1354, 1636
NlaIII	CATG	4 cut(s)	304, 645, 767, 1054
NlaIV	GGNNCC	3 cut(s)	196, 205, 1026
NmeAIII	GCCGAG	1 cut(s)	1549
NmuCI	GTSAC	1 cut(s)	281
OliI	CACNNNNGTG	1 cut(s)	24
PagI	TCATGA	1 cut(s)	763
PceI	AGGCCT	1 cut(s)	872
PctI	GAATGC	1 cut(s)	1219
PdmI	GAANNNNTTC	3 cut(s)	612, 904, 995
PfeI	GAWTC	4 cut(s)	132, 311, 501, 950
PkrI	GCNGC	6 cut(s)	985, 1019, 1366, 1466, 1522, 1543
Ple19I	CGATCG	2 cut(s)	121, 1357
PleI	GAGTC	1 cut(s)	604
PpsI	GAGTC	1 cut(s)	604
PpuMI	RGGWCCY	1 cut(s)	1489
PsiI	TTATAA	1 cut(s)	1586
Psp124BI	GAGCTC	1 cut(s)	1530
Psp5II	RGGWCCY	1 cut(s)	1489
Psp6I	CCWGG	2 cut(s)	824, 1384
PspEI	GGTNACC	1 cut(s)	281
PspGI	CCWGG	2 cut(s)	824, 1384
PspN4I	GGNNCC	3 cut(s)	196, 205, 1026
PspPI	GGNCC	2 cut(s)	194, 1489
PspPPI	RGGWCCY	1 cut(s)	1489
PstI	CTGCAG	1 cut(s)	509
PstNI	CAGNNNCTG	4 cut(s)	36, 135, 695, 1541
PsuI	RGATCY	3 cut(s)	263, 691, 1168
PvuI	CGATCG	2 cut(s)	121, 1357
RsaI	GTAC	2 cut(s)	662, 1278
RsaNI	GTAC	2 cut(s)	661, 1277
RseI	CAYNNNNRTG	1 cut(s)	24
SacI	GAGCTC	1 cut(s)	1530
SalI	GTCGAC	1 cut(s)	66
SaqAI	TTAA	7 cut(s)	632, 654, 819, 1403, 1452, 1481, 1578
SatI	GCNGC	6 cut(s)	984, 1018, 1365, 1465, 1521, 1542
Sau3AI	GATC	9 cut(s)	118, 263, 528, 676, 691, 1037, 1168, 1354, 1636
Sau96I	GGNCC	2 cut(s)	194, 1489
SchI	GAGTC	1 cut(s)	605
ScrFI	CCNGG	3 cut(s)	279, 826, 1386
SduI	GDGCHC	3 cut(s)	1071, 1530, 1605
SfaNI	GCATC	5 cut(s)	98, 255, 361, 1188, 1571
SfcI	CTRYAG	3 cut(s)	61, 505, 1661
SinI	GGWCC	1 cut(s)	1489
SmiMI	CAYNNNNRTG	1 cut(s)	24
SseBI	AGGCCT	1 cut(s)	872
SsiI	CCGC	4 cut(s)	234, 665, 1017, 1437
SspMI	CTAG	5 cut(s)	161, 470, 786, 839, 1247
SstI	GAGCTC	1 cut(s)	1530
StuI	AGGCCT	1 cut(s)	872
StyD4I	CCNGG	3 cut(s)	277, 824, 1384
StyI	CCWWGG	3 cut(s)	450, 641, 1101
TaaI	ACNGT	7 cut(s)	26, 253, 589, 1276, 1379, 1400, 1596
TaiI	ACGT	3 cut(s)	687, 723, 1461
TauI	GCSGC	1 cut(s)	1020
TfiI	GAWTC	4 cut(s)	132, 311, 501, 950
Tru1I	TTAA	7 cut(s)	632, 654, 819, 1403, 1452, 1481, 1578
Tru9I	TTAA	7 cut(s)	632, 654, 819, 1403, 1452, 1481, 1578
TscAI	CASTG	2 cut(s)	29, 1330
TseFI	GTSAC	1 cut(s)	281
TseI	GCWGC	5 cut(s)	983, 1364, 1464, 1520, 1541
Tsp45I	GTSAC	1 cut(s)	281
TspDTI	ATGAA	6 cut(s)	289, 324, 858, 988, 1023, 1537
TspGWI	ACGGA	1 cut(s)	554
TspRI	CASTG	2 cut(s)	29, 1330
VpaK11BI	GGWCC	1 cut(s)	1489
XagI	CCTNNNNNAGG	1 cut(s)	164
XapI	RAATTY	2 cut(s)	54, 995
XmiI	GTMKAC	1 cut(s)	67
XmnI	GAANNNNTTC	3 cut(s)	612, 904, 995
XspI	CTAG	5 cut(s)	161, 470, 786, 839, 1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.