MD17G1097000.v1.1

Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1 NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
8222044 .. 8227996
5953 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1097000.v1.1.491

Sequence Viewer

Length: 1572 bp
ATGGCCGAACCCAAGGCCAAATACGATCGCCAGCTCAGAATCTGGGGCGAGCAAGGGCAGGCAGCCCTAGAGAAGGCCAGCATATGCCTACTGAACTGCGGCCCCACTGGCTCCGAAACCTTGAAGAACCTTGTTCTTGGCGGGGTTGGAAGCATCACCGTCATCGATGGATCTAAAGTCGAATTGGGTGACCTCGGAAATAACTTCATGGTTGATGAATCGAGCGTTGGGAAATCGAAAGCGAAATGCGTTTGCCAGTTTCTTCAGGAGCTGAATGATTCCGTTAAGGCGAAGTTTATCGAAGAGTATCCGGAGGTTTTGATTGAGACCAACCCATCATTCTTTTCTCAGTTTACCTTGGTTGTAGCTACTCAGCTAGGGGAACGTTCAATGGTAAAGCTTGATAGAATCTGCAGGGAGGCAAATGTGATACTGATCTTTGCTCGCTCTTATGGCCTCACTGGGCTTGTCCGTATCAGTTTGAAGGAACATACTGTGATCGAGTCAAAGCCTGAACATTTTCTGGATGACCTTCGTTTAAATAATCCATGGCCTGAGCTTAAAAGGTATGCAGAAACCATTGATTTAGATGTGTCGGATCCTGTTGCTCACAAACACACGCCATATGTCCTCATTCTTGTTAAGATGGCAGAGGAGTGGACCAAAAATCATGATGGTAAACTTCCATCAACTAGGGAAGAGAGAAAAGAGTTCAAGGAGCTTATTAAAGCTAGGATGACTGCACTAGATGAAGATAACTATAAAGAAGCCATTGAGGCCTCCTTCAAAGTCTTTGCTCCACGAGGAATTAGTTCAGACTTGCAACAGGTAATTGGAGATAGCTGTGTGGAAGTTGATTCCAGTTCATCTGATTTTTGGGTGATGGTGGCAGCGTTGAAGGAGTTCATAGAAAATGAAGGTGGTGGCGAGGCACCTCTTGAAGGATCAATACCAGATATGACATCTTCGACAGAGCACTATATATCTTTGCAGAAACTCTACCAAGCCAAGGCTGAAGCTGATTATCTTGTTATTGAGCAAAGGGTTAGGACTATTCTGAAAAAAATTGGTAGGGATCCAAACAGCATCTCAAAGACAACAATAAAAAGTTTCTGCAAGAATGCAAGAAAACTCAAAGTTTGCAGGTATCGCCTAGTCGAAGATGAGTTCAATTCTCCAACCGCACCAGAGTTGCAGAAGCTTCTAACAGATGAGGATCACAGTGTAGCTGCTGGATTTTATGTTTTGCTTAGAGCTGTTGACCGATTTGCTGCCAATTACAACAGTTTTCCTGGGCAATTTGATGGTTTAATGGATGAGGACATATCTCGATTGAAGACTACAGCTGTTGGCCTGCTTAGTGATGTGGGCTGCAATGGCGTTACATTAAACGAGGACCTAATCAATGAGATGTGTCGATTTGGTGCTGCCGAGCTCCACGCAGTTGCTGCTTTCATTGGAGGAATTGCATCTCAGGAAGTGATTAAGCTTATAACAAGACAGTTTGTGCCCCTTTCCGGAACTTTTGTCTTCAACGGCATTGATCAGAAGTCTCAATTGTTGTCTCTGTAG

Protein Analysis

524

Amino Acids

58.19

Weight (kDa)

5.24

Isoelectric Point (pI)

32.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ThiF PF00899 8 - 509 2e-25 ThiF family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1493
Acc36I ACCTGC 1 cut(s) 1134
AccB1I GGYRCC 1 cut(s) 931
AccIII TCCGGA 2 cut(s) 310, 1517
AciI CCGC 3 cut(s) 99, 141, 1182
AclI AACGTT 1 cut(s) 385
AclWI GGATC 7 cut(s) 178, 593, 606, 952, 1070, 1083, 1224
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 2 cut(s) 248, 1035
AfiI CCNNNNNNNGG 4 cut(s) 73, 941, 1009, 1517
AjnI CCWGG 1 cut(s) 1291
AjuI GAANNNNNNNTTGG 4 cut(s) 210, 242, 323, 355
Alw21I GWGCWC 2 cut(s) 978, 1437
Alw26I GTCTC 2 cut(s) 320, 1557
AlwI GGATC 7 cut(s) 178, 593, 606, 952, 1070, 1083, 1224
AlwNI CAGNNNCTG 3 cut(s) 42, 271, 1448
Aor13HI TCCGGA 2 cut(s) 310, 1517
AoxI GGCC 8 cut(s) 3, 15, 75, 100, 454, 551, 777, 1351
ApeKI GCWGC 7 cut(s) 62, 890, 1229, 1271, 1371, 1427, 1448
Asp700I GAANNNNTTC 3 cut(s) 519, 811, 902
AspS9I GGNCC 3 cut(s) 101, 660, 1396
AsuHPI GGTGA 3 cut(s) 148, 200, 892
AvaII GGWCC 2 cut(s) 660, 1396
BaeGI GKGCMC 1 cut(s) 1512
BamHI GGATCC 2 cut(s) 598, 1075
BanI GGYRCC 1 cut(s) 931
BanII GRGCYC 1 cut(s) 1437
BarI GAAGNNNNNNTAC 2 cut(s) 933, 965
BauI CACGAG 1 cut(s) 801
BbsI GAAGAC 2 cut(s) 1343, 1522
Bbv12I GWGCWC 2 cut(s) 978, 1437
BbvI GCAGC 7 cut(s) 74, 902, 1216, 1258, 1358, 1414, 1435
BccI CCATC 7 cut(s) 161, 343, 640, 668, 694, 877, 1298
BceAI ACGGC 1 cut(s) 1552
BciT130I CCWGG 1 cut(s) 1293
BciVI GTATCC 1 cut(s) 318
BclI TGATCA 1 cut(s) 1543
BcoDI GTCTC 2 cut(s) 320, 1557
BfaI CTAG 6 cut(s) 68, 377, 693, 732, 746, 1154
BfmI CTRYAG 3 cut(s) 412, 1341, 1568
BfuAI ACCTGC 1 cut(s) 1134
BfuI GTATCC 1 cut(s) 318
BglI GCCNNNNNGGC 2 cut(s) 108, 776
BisI GCNGC 8 cut(s) 63, 100, 891, 1230, 1272, 1372, 1428, 1449
BlsI GCNGC 8 cut(s) 64, 101, 892, 1231, 1273, 1373, 1429, 1450
Bme1390I CCNGG 1 cut(s) 1293
Bme18I GGWCC 2 cut(s) 660, 1396
BmgT120I GGNCC 3 cut(s) 101, 660, 1396
BmiI GGNNCC 5 cut(s) 103, 112, 600, 933, 1077
BmrFI CCNGG 1 cut(s) 1293
BmrI ACTGGG 1 cut(s) 471
BmsI GCATC 3 cut(s) 162, 1095, 1478
BmuI ACTGGG 1 cut(s) 471
BpiI GAAGAC 2 cut(s) 1343, 1522
Bpu10I CCTNAGC 1 cut(s) 555
Bsa29I ATCGAT 1 cut(s) 165
BsaBI GATNNNNATC 2 cut(s) 434, 1215
BsaI GGTCTC 1 cut(s) 320
BsaJI CCNNGG 6 cut(s) 12, 193, 357, 548, 1008, 1292
BsaWI WCCGGW 2 cut(s) 310, 1517
Bsc4I CCNNNNNNNGG 4 cut(s) 73, 941, 1009, 1517
Bse1I ACTGG 4 cut(s) 112, 256, 466, 861
Bse3DI GCAATG 1 cut(s) 1381
Bse8I GATNNNNATC 2 cut(s) 434, 1215
BseAI TCCGGA 2 cut(s) 310, 1517
BseBI CCWGG 1 cut(s) 1293
BseCI ATCGAT 1 cut(s) 165
BseDI CCNNGG 6 cut(s) 12, 193, 357, 548, 1008, 1292
BseGI GGATG 3 cut(s) 532, 741, 1321
BseJI GATNNNNATC 2 cut(s) 434, 1215
BseLI CCNNNNNNNGG 4 cut(s) 73, 941, 1009, 1517
BseMI GCAATG 1 cut(s) 1381
BseMII CTCAG 5 cut(s) 49, 362, 386, 546, 1487
BseNI ACTGG 4 cut(s) 112, 256, 466, 861
BseRI GAGGAG 1 cut(s) 668
BseSI GKGCMC 1 cut(s) 1512
BseXI GCAGC 7 cut(s) 74, 902, 1216, 1258, 1358, 1414, 1435
BsgI GTGCAG 1 cut(s) 726
Bsh1285I CGRYCG 1 cut(s) 28
BshFI GGCC 8 cut(s) 5, 17, 77, 102, 456, 553, 779, 1353
BshNI GGYRCC 1 cut(s) 931
BshVI ATCGAT 1 cut(s) 165
BsiEI CGRYCG 1 cut(s) 28
BsiHKAI GWGCWC 2 cut(s) 978, 1437
BsiSI CCGG 2 cut(s) 311, 1518
BslI CCNNNNNNNGG 4 cut(s) 73, 941, 1009, 1517
BsmAI GTCTC 2 cut(s) 320, 1557
BsmI GAATGC 1 cut(s) 1126
BsnI GGCC 8 cut(s) 5, 17, 77, 102, 456, 553, 779, 1353
Bso31I GGTCTC 1 cut(s) 320
Bsp1286I GDGCHC 3 cut(s) 978, 1437, 1512
Bsp13I TCCGGA 2 cut(s) 310, 1517
Bsp143I GATC 9 cut(s) 25, 170, 435, 498, 598, 944, 1075, 1216, 1543
Bsp19I CCATGG 1 cut(s) 548
BspACI CCGC 3 cut(s) 99, 141, 1182
BspANI GGCC 8 cut(s) 5, 17, 77, 102, 456, 553, 779, 1353
BspCNI CTCAG 5 cut(s) 48, 361, 385, 547, 1486
BspDI ATCGAT 1 cut(s) 165
BspEI TCCGGA 2 cut(s) 310, 1517
BspHI TCATGA 1 cut(s) 670
BspLI GGNNCC 5 cut(s) 103, 112, 600, 933, 1077
BspMAI CTGCAG 1 cut(s) 416
BspMI ACCTGC 1 cut(s) 1134
BspPI GGATC 7 cut(s) 178, 593, 606, 952, 1070, 1083, 1224
BspT107I GGYRCC 1 cut(s) 931
BspTNI GGTCTC 1 cut(s) 320
BsrDI GCAATG 1 cut(s) 1381
BsrI ACTGG 4 cut(s) 112, 256, 466, 861
BssECI CCNNGG 6 cut(s) 12, 193, 357, 548, 1008, 1292
BssMI GATC 9 cut(s) 25, 170, 435, 498, 598, 944, 1075, 1216, 1543
BssSI CACGAG 1 cut(s) 801
BssT1I CCWWGG 4 cut(s) 12, 357, 548, 1008
Bst2BI CACGAG 1 cut(s) 801
Bst2UI CCWGG 1 cut(s) 1293
Bst4CI ACNGT 5 cut(s) 160, 496, 1223, 1286, 1503
Bst6I CTCTTC 2 cut(s) 297, 693
BstAPI GCANNNNNTGC 1 cut(s) 1448
BstC8I GCNNGC 6 cut(s) 32, 50, 60, 79, 445, 1355
BstDEI CTNAG 7 cut(s) 35, 348, 372, 555, 1250, 1358, 1473
BstDSI CCRYGG 1 cut(s) 548
BstEII GGTNACC 1 cut(s) 188
BstENI CCTNNNNNAGG 2 cut(s) 71, 939
BstF5I GGATG 3 cut(s) 532, 741, 1321
BstKTI GATC 9 cut(s) 28, 173, 438, 501, 601, 947, 1078, 1219, 1546
BstMAI GTCTC 2 cut(s) 320, 1557
BstMBI GATC 9 cut(s) 25, 170, 435, 498, 598, 944, 1075, 1216, 1543
BstMCI CGRYCG 1 cut(s) 28
BstMWI GCNNNNNNNGC 6 cut(s) 108, 453, 776, 1149, 1377, 1448
BstNI CCWGG 1 cut(s) 1293
BstPI GGTNACC 1 cut(s) 188
BstSCI CCNGG 1 cut(s) 1291
BstSFI CTRYAG 3 cut(s) 412, 1341, 1568
BstSLI GKGCMC 1 cut(s) 1512
BstV1I GCAGC 7 cut(s) 74, 902, 1216, 1258, 1358, 1414, 1435
BstV2I GAAGAC 2 cut(s) 1343, 1522
BstX2I RGATCY 3 cut(s) 170, 598, 1075
BstYI RGATCY 3 cut(s) 170, 598, 1075
Bsu15I ATCGAT 1 cut(s) 165
BsuI GTATCC 1 cut(s) 318
BsuRI GGCC 8 cut(s) 5, 17, 77, 102, 456, 553, 779, 1353
BsuTUI ATCGAT 1 cut(s) 165
BtgI CCRYGG 1 cut(s) 548
BtsCI GGATG 3 cut(s) 532, 741, 1321
BtsIMutI CAGTG 3 cut(s) 105, 459, 1228
BveI ACCTGC 1 cut(s) 1134
Cac8I GCNNGC 6 cut(s) 32, 50, 60, 79, 445, 1355
CaiI CAGNNNCTG 3 cut(s) 42, 271, 1448
CciI TCATGA 1 cut(s) 670
Cfr13I GGNCC 3 cut(s) 101, 660, 1396
ClaI ATCGAT 1 cut(s) 165
CviAII CATG 3 cut(s) 208, 549, 671
DdeI CTNAG 7 cut(s) 35, 348, 372, 555, 1250, 1358, 1473
DpnI GATC 9 cut(s) 27, 172, 437, 500, 600, 946, 1077, 1218, 1545
DpnII GATC 9 cut(s) 25, 170, 435, 498, 598, 944, 1075, 1216, 1543
DraI TTTAAA 1 cut(s) 540
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 297, 693
EarI CTCTTC 2 cut(s) 297, 693
Ecl136II GAGCTC 1 cut(s) 1435
Eco130I CCWWGG 4 cut(s) 12, 357, 548, 1008
Eco147I AGGCCT 1 cut(s) 779
Eco24I GRGCYC 1 cut(s) 1437
Eco31I GGTCTC 1 cut(s) 320
Eco47I GGWCC 2 cut(s) 660, 1396
Eco53kI GAGCTC 1 cut(s) 1435
Eco57I CTGAAG 2 cut(s) 248, 1035
Eco91I GGTNACC 1 cut(s) 188
EcoICRI GAGCTC 1 cut(s) 1435
EcoNI CCTNNNNNAGG 2 cut(s) 71, 939
EcoO109I RGGNCCY 1 cut(s) 1396
EcoO65I GGTNACC 1 cut(s) 188
EcoRII CCWGG 1 cut(s) 1291
EcoT14I CCWWGG 4 cut(s) 12, 357, 548, 1008
EcoT38I GRGCYC 1 cut(s) 1437
ErhI CCWWGG 4 cut(s) 12, 357, 548, 1008
FaeI CATG 3 cut(s) 211, 552, 674
FatI CATG 3 cut(s) 207, 548, 670
FauI CCCGC 1 cut(s) 134
FauNDI CATATG 2 cut(s) 83, 625
FbaI TGATCA 1 cut(s) 1543
Fnu4HI GCNGC 8 cut(s) 63, 100, 891, 1230, 1272, 1372, 1428, 1449
FokI GGATG 3 cut(s) 539, 748, 1328
FriOI GRGCYC 1 cut(s) 1437
Fsp4HI GCNGC 8 cut(s) 63, 100, 891, 1230, 1272, 1372, 1428, 1449
FspBI CTAG 6 cut(s) 68, 377, 693, 732, 746, 1154
GluI GCNGC 8 cut(s) 63, 100, 891, 1230, 1272, 1372, 1428, 1449
HaeIII GGCC 8 cut(s) 5, 17, 77, 102, 456, 553, 779, 1353
HapII CCGG 2 cut(s) 311, 1518
Hin1II CATG 3 cut(s) 211, 552, 674
HincII GTYRAC 1 cut(s) 1261
HindII GTYRAC 1 cut(s) 1261
HindIII AAGCTT 3 cut(s) 398, 1199, 1487
HinfI GANTC 6 cut(s) 39, 218, 278, 408, 503, 857
HpaII CCGG 2 cut(s) 311, 1518
HphI GGTGA 3 cut(s) 148, 200, 892
Hpy166II GTNNAC 4 cut(s) 354, 660, 680, 1261
Hpy188I TCNGA 8 cut(s) 38, 115, 197, 598, 817, 871, 1059, 1548
Hpy188III TCNNGA 8 cut(s) 266, 311, 524, 671, 938, 1329, 1475, 1518
Hpy8I GTNNAC 4 cut(s) 354, 660, 680, 1261
HpyAV CCTTC 7 cut(s) 67, 478, 542, 793, 892, 911, 935
HpyCH4III ACNGT 5 cut(s) 160, 496, 1223, 1286, 1503
HpyCH4IV ACGT 1 cut(s) 385
HpyF10VI GCNNNNNNNGC 6 cut(s) 108, 453, 776, 1149, 1377, 1448
HpyF3I CTNAG 7 cut(s) 35, 348, 372, 555, 1250, 1358, 1473
HpySE526I ACGT 1 cut(s) 385
Hsp92II CATG 3 cut(s) 211, 552, 674
Kpn2I TCCGGA 2 cut(s) 310, 1517
Ksp22I TGATCA 1 cut(s) 1543
Kzo9I GATC 9 cut(s) 25, 170, 435, 498, 598, 944, 1075, 1216, 1543
LmnI GCTCC 5 cut(s) 116, 268, 718, 802, 1440
Lsp1109I GCAGC 7 cut(s) 74, 902, 1216, 1258, 1358, 1414, 1435
LweI GCATC 3 cut(s) 162, 1095, 1478
MaeI CTAG 6 cut(s) 68, 377, 693, 732, 746, 1154
MaeII ACGT 1 cut(s) 385
MaeIII GTNAC 2 cut(s) 188, 1381
MalI GATC 9 cut(s) 27, 172, 437, 500, 600, 946, 1077, 1218, 1545
MboI GATC 9 cut(s) 25, 170, 435, 498, 598, 944, 1075, 1216, 1543
MboII GAAGA 9 cut(s) 136, 254, 314, 710, 764, 957, 1172, 1348, 1522
MfeI CAATTG 1 cut(s) 1556
MflI RGATCY 3 cut(s) 170, 598, 1075
MhlI GDGCHC 3 cut(s) 978, 1437, 1512
MluCI AATT 9 cut(s) 182, 807, 831, 1065, 1171, 1276, 1298, 1464, 1556
MlyI GAGTC 1 cut(s) 512
MmeI TCCRAC 3 cut(s) 127, 576, 1202
MroI TCCGGA 2 cut(s) 310, 1517
MroXI GAANNNNTTC 3 cut(s) 519, 811, 902
MseI TTAA 8 cut(s) 285, 539, 561, 642, 726, 1310, 1388, 1485
MspA1I CMGCKG 1 cut(s) 1346
MspI CCGG 2 cut(s) 311, 1518
MspR9I CCNGG 1 cut(s) 1293
MunI CAATTG 1 cut(s) 1556
Mva1269I GAATGC 1 cut(s) 1126
MvaI CCWGG 1 cut(s) 1293
MwoI GCNNNNNNNGC 6 cut(s) 108, 453, 776, 1149, 1377, 1448
NcoI CCATGG 1 cut(s) 548
NdeI CATATG 2 cut(s) 83, 625
NdeII GATC 9 cut(s) 25, 170, 435, 498, 598, 944, 1075, 1216, 1543
NlaIII CATG 3 cut(s) 211, 552, 674
NlaIV GGNNCC 5 cut(s) 103, 112, 600, 933, 1077
NmeAIII GCCGAG 1 cut(s) 1456
NmuCI GTSAC 1 cut(s) 188
PagI TCATGA 1 cut(s) 670
PceI AGGCCT 1 cut(s) 779
PctI GAATGC 1 cut(s) 1126
PdmI GAANNNNTTC 3 cut(s) 519, 811, 902
PfeI GAWTC 5 cut(s) 39, 218, 278, 408, 857
PkrI GCNGC 8 cut(s) 64, 101, 892, 1231, 1273, 1373, 1429, 1450
Ple19I CGATCG 1 cut(s) 28
PleI GAGTC 1 cut(s) 511
PpsI GAGTC 1 cut(s) 511
PpuMI RGGWCCY 1 cut(s) 1396
PsiI TTATAA 1 cut(s) 1493
Psp124BI GAGCTC 1 cut(s) 1437
Psp1406I AACGTT 1 cut(s) 385
Psp5II RGGWCCY 1 cut(s) 1396
Psp6I CCWGG 1 cut(s) 1291
PspEI GGTNACC 1 cut(s) 188
PspGI CCWGG 1 cut(s) 1291
PspN4I GGNNCC 5 cut(s) 103, 112, 600, 933, 1077
PspPI GGNCC 3 cut(s) 101, 660, 1396
PspPPI RGGWCCY 1 cut(s) 1396
PstI CTGCAG 1 cut(s) 416
PstNI CAGNNNCTG 3 cut(s) 42, 271, 1448
PsuI RGATCY 3 cut(s) 170, 598, 1075
PvuI CGATCG 1 cut(s) 28
PvuII CAGCTG 1 cut(s) 1346
SacI GAGCTC 1 cut(s) 1437
SaqAI TTAA 8 cut(s) 285, 539, 561, 642, 726, 1310, 1388, 1485
SatI GCNGC 8 cut(s) 63, 100, 891, 1230, 1272, 1372, 1428, 1449
Sau3AI GATC 9 cut(s) 25, 170, 435, 498, 598, 944, 1075, 1216, 1543
Sau96I GGNCC 3 cut(s) 101, 660, 1396
SchI GAGTC 1 cut(s) 512
ScrFI CCNGG 1 cut(s) 1293
SduI GDGCHC 3 cut(s) 978, 1437, 1512
SfaNI GCATC 3 cut(s) 162, 1095, 1478
SfcI CTRYAG 3 cut(s) 412, 1341, 1568
SinI GGWCC 2 cut(s) 660, 1396
Sse9I AATT 9 cut(s) 182, 807, 831, 1065, 1171, 1276, 1298, 1464, 1556
SseBI AGGCCT 1 cut(s) 779
SsiI CCGC 3 cut(s) 99, 141, 1182
SspMI CTAG 6 cut(s) 68, 377, 693, 732, 746, 1154
SstI GAGCTC 1 cut(s) 1437
StuI AGGCCT 1 cut(s) 779
StyD4I CCNGG 1 cut(s) 1291
StyI CCWWGG 4 cut(s) 12, 357, 548, 1008
TaaI ACNGT 5 cut(s) 160, 496, 1223, 1286, 1503
TaiI ACGT 1 cut(s) 388
TaqII GACCGA 1 cut(s) 1278
TasI AATT 9 cut(s) 182, 807, 831, 1065, 1171, 1276, 1298, 1464, 1556
TauI GCSGC 1 cut(s) 102
TfiI GAWTC 5 cut(s) 39, 218, 278, 408, 857
Tru1I TTAA 8 cut(s) 285, 539, 561, 642, 726, 1310, 1388, 1485
Tru9I TTAA 8 cut(s) 285, 539, 561, 642, 726, 1310, 1388, 1485
TscAI CASTG 3 cut(s) 112, 466, 1228
TseFI GTSAC 1 cut(s) 188
TseI GCWGC 7 cut(s) 62, 890, 1229, 1271, 1371, 1427, 1448
Tsp45I GTSAC 1 cut(s) 188
TspDTI ATGAA 7 cut(s) 196, 231, 765, 855, 895, 930, 1444
TspGWI ACGGA 2 cut(s) 271, 461
TspRI CASTG 3 cut(s) 112, 466, 1228
VpaK11BI GGWCC 2 cut(s) 660, 1396
XagI CCTNNNNNAGG 2 cut(s) 71, 939
XmnI GAANNNNTTC 3 cut(s) 519, 811, 902
XspI CTAG 6 cut(s) 68, 377, 693, 732, 746, 1154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.