MD09G1133900.v1.1

This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Forward (+)
10307048 .. 10310546
3499 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1133900.v1.1.491

Sequence Viewer

Length: 1551 bp
ATGGCGTCCTCTTCGATGTCAGCAAGCGGAGTGCTCACCTCCCGATCGTCGGTGTTGCGGAACTCGAAGCAGAACCATAACATCAGCCGCCTCTCGTTCAGTGGCTCTCATCTCTCCGGGACCAAAATCTCCGCGCCCAGCACCTGTTTGAGGAGATCGCCCACTAACAGAGTCCCGCCGCTGGTTGTGTCTCCCAAAGCTGTTTCCGATTCCAAGAACTCTCAGACGTGTCTTGATCCCGATGCGAGCCGGAGTGTGTTGGGGATTATACTGGGTGGGGGAGCTGGGACGAGGCTTTACCCATTGACAAAGAAGCGTGCGAAGCCTGCTGTTCCATTGGGAGCAAACTACAGGCTGATCGATATCCCAGTCAGTAATTGCCTCAACAGCAACGTATCAAAGATCTATGTGCTGACCCAGTTCAATTCCGCTTCGCTCAATCGCCATCTTTCTCGTGCTTATGCTAGTAACATGGGTGGCTACAAAAACGAAGGCTTTGTTGAGGTTCTTGCTGCCCAGCAGAGCCCTGAGAATCCCAATTGGTTTCAGGGTACCGCGGATGCCGTGAGGCAGTACTTGTGGTTGTTTGAGGAGCACAATGTGTTGGAGTTTTTGGTTCTTGCTGGGGACCACTTGTATAGGATGGACTATGAGAGGTTTATTCAGGCACATAGAGAAACTGATGCAGACATCACTGTGGCTGCTCTGCCCATGGATGAGAAGCGTGCTACCGCCTTTGGTTTGATGAAGATTGATGAAGAGGGAAGGATTATTGAGTTTGCTGAGAAACCTAAAGGGGAGCAACTCAAAGCTATGAAGGTTGATACTACTATCTTGGGTCTTGATGATGAGAGAGCTAAAGAGATGCCTTATATTGCCAGTATGGGTATATATGTTGTGAGCAAAAATGTCATGTTAGATCTACTTCGAGACAAGTTTCCTGGTGCAAATGATTTCGGGAGTGAAGTTATTCCAGGCGCAACTTCCATTGGTTTGAGGGTTCAAGCTTATCTGTATGATGGCTACTGGGAAGATATTGGTACCATTGAGGCTTTCTACAATGCAAACTTGGGGATAACAAAAAAACCAGTTCCAGATTTCAGCTTTTATGATCGTTCATCCCCAATCTACACCCAACCTCGGTATTTACCTCCATCAAAAATGCTTGATGCTGATGTCACAGATAGTGTTATTGGCGAGGGATGTGTAATAAAGAACTGTAAAATTCACCATTCAGTCGTTGGGCTTCGGTCTTGCATAGCGGAGGGTGCTGTCATTGAAGACACATTACTGATGGGAGCTGACTACTATGAGACTGATGCTGACAGGAGGTTTCTAGCTGCAAAGGGTAGCGTTCCAATCGGTATTGGCAAGAATTCTCACATTAGGAGAGCTATAATTGATAAGAATGCTCGAATTGGAGAAAATGTTAAGATTATCAATATCGACAATGTGCAAGAAGCAGCAAGAGAAACAGACGGATATTTCATAAAGAGCGCGATTGTCACAGTGATCAAGGATGCCTTGATTCCTAGTGGAACAGTAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

517

Amino Acids

56.59

Weight (kDa)

7.61

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NTP_transferase PF00483 88 - 361 2.5e-65 Nucleotidyl transferase
LbH_GLGC PF25247 381 - 515 3e-53 GLGC left-handed parallel beta-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011236)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 551, 1040
AccB1I GGYRCC 2 cut(s) 551, 1040
AccII CGCG 3 cut(s) 134, 557, 1499
AclWI GGATC 1 cut(s) 230
AcsI RAATTY 2 cut(s) 1224, 1375
AcyI GRCGYC 1 cut(s) 5
AdeI CACNNNGTG 1 cut(s) 601
AfaI GTAC 3 cut(s) 553, 575, 1042
AfiI CCNNNNNNNGG 4 cut(s) 49, 150, 181, 1140
AflIII ACRYGT 1 cut(s) 227
AgsI TTSAA 3 cut(s) 424, 1004, 1280
AjiI CACGTC 1 cut(s) 228
AjnI CCWGG 2 cut(s) 940, 973
AluBI AGCT 9 cut(s) 200, 284, 812, 857, 1007, 1104, 1301, 1340, 1394
AluI AGCT 9 cut(s) 200, 284, 812, 857, 1007, 1104, 1301, 1340, 1394
Alw21I GWGCWC 2 cut(s) 36, 597
Alw26I GTCTC 3 cut(s) 195, 924, 1307
AlwI GGATC 1 cut(s) 230
AlwNI CAGNNNCTG 1 cut(s) 144
ApeKI GCWGC 4 cut(s) 512, 701, 1340, 1463
ApoI RAATTY 2 cut(s) 1224, 1375
Asp700I GAANNNNTTC 1 cut(s) 969
Asp718I GGTACC 2 cut(s) 551, 1040
AspLEI GCGC 3 cut(s) 136, 980, 1499
AspS9I GGNCC 2 cut(s) 120, 628
AsuC2I CCSGG 1 cut(s) 118
AsuHPI GGTGA 2 cut(s) 28, 1220
AvaII GGWCC 2 cut(s) 120, 628
BanI GGYRCC 2 cut(s) 551, 1040
BanII GRGCYC 1 cut(s) 527
BarI GAAGNNNNNNTAC 2 cut(s) 1272, 1304
BauI CACGAG 1 cut(s) 453
BbsI GAAGAC 1 cut(s) 1287
Bbv12I GWGCWC 2 cut(s) 36, 597
BbvI GCAGC 4 cut(s) 499, 688, 1327, 1475
BccI CCATC 5 cut(s) 453, 637, 1013, 1162, 1288
BceAI ACGGC 1 cut(s) 548
BciT130I CCWGG 2 cut(s) 942, 975
BclI TGATCA 1 cut(s) 1512
BcnI CCSGG 1 cut(s) 118
BcoDI GTCTC 3 cut(s) 195, 924, 1307
BfaI CTAG 4 cut(s) 465, 1337, 1533, 1549
BfmI CTRYAG 1 cut(s) 349
BglII AGATCT 2 cut(s) 402, 919
BisI GCNGC 6 cut(s) 88, 179, 513, 702, 1341, 1464
BlsI GCNGC 6 cut(s) 89, 180, 514, 703, 1342, 1465
BmcAI AGTACT 1 cut(s) 575
Bme1390I CCNGG 3 cut(s) 118, 942, 975
Bme18I GGWCC 2 cut(s) 120, 628
BmgBI CACGTC 1 cut(s) 228
BmgT120I GGNCC 2 cut(s) 120, 628
BmiI GGNNCC 4 cut(s) 121, 553, 629, 1042
BmrFI CCNGG 3 cut(s) 118, 942, 975
BmrI ACTGGG 4 cut(s) 281, 362, 412, 1036
BmsI GCATC 7 cut(s) 232, 550, 673, 855, 1159, 1309, 1510
BmuI ACTGGG 4 cut(s) 281, 362, 412, 1036
BpiI GAAGAC 1 cut(s) 1287
BpuMI CCSGG 1 cut(s) 118
Bsa29I ATCGAT 1 cut(s) 360
BsaBI GATNNNNATC 1 cut(s) 362
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 3 cut(s) 555, 711, 1139
BsaXI ACNNNNNCTCC 2 cut(s) 1413, 1443
Bsc4I CCNNNNNNNGG 4 cut(s) 49, 150, 181, 1140
Bse1I ACTGG 6 cut(s) 276, 368, 418, 879, 1031, 1088
Bse8I GATNNNNATC 1 cut(s) 362
BseBI CCWGG 2 cut(s) 942, 975
BseCI ATCGAT 1 cut(s) 360
BseDI CCNNGG 3 cut(s) 555, 711, 1139
BseGI GGATG 6 cut(s) 565, 648, 721, 1118, 1208, 1525
BseJI GATNNNNATC 1 cut(s) 362
BseLI CCNNNNNNNGG 4 cut(s) 49, 150, 181, 1140
BseMII CTCAG 3 cut(s) 236, 519, 774
BseNI ACTGG 6 cut(s) 276, 368, 418, 879, 1031, 1088
BseRI GAGGAG 2 cut(s) 166, 605
BseXI GCAGC 4 cut(s) 499, 688, 1327, 1475
BseYI CCCAGC 4 cut(s) 137, 284, 516, 623
Bsh1236I CGCG 3 cut(s) 134, 557, 1499
Bsh1285I CGRYCG 1 cut(s) 47
BshNI GGYRCC 2 cut(s) 551, 1040
BshVI ATCGAT 1 cut(s) 360
BsiEI CGRYCG 1 cut(s) 47
BsiHKAI GWGCWC 2 cut(s) 36, 597
BsiSI CCGG 2 cut(s) 117, 250
BslFI GGGAC 4 cut(s) 133, 158, 301, 641
BslI CCNNNNNNNGG 4 cut(s) 49, 150, 181, 1140
BsmAI GTCTC 3 cut(s) 195, 924, 1307
BsmFI GGGAC 4 cut(s) 133, 158, 301, 641
BsmI GAATGC 1 cut(s) 1414
Bsp1286I GDGCHC 3 cut(s) 36, 527, 597
Bsp143I GATC 8 cut(s) 44, 155, 235, 357, 402, 919, 1111, 1512
Bsp19I CCATGG 1 cut(s) 711
BspCNI CTCAG 3 cut(s) 235, 520, 775
BspDI ATCGAT 1 cut(s) 360
BspFNI CGCG 3 cut(s) 134, 557, 1499
BspLI GGNNCC 4 cut(s) 121, 553, 629, 1042
BspPI GGATC 1 cut(s) 230
BspT107I GGYRCC 2 cut(s) 551, 1040
BsrI ACTGG 6 cut(s) 276, 368, 418, 879, 1031, 1088
BssECI CCNNGG 3 cut(s) 555, 711, 1139
BssMI GATC 8 cut(s) 44, 155, 235, 357, 402, 919, 1111, 1512
BssNI GRCGYC 1 cut(s) 5
BssSI CACGAG 1 cut(s) 453
BssT1I CCWWGG 1 cut(s) 711
Bst2BI CACGAG 1 cut(s) 453
Bst2UI CCWGG 2 cut(s) 942, 975
Bst4CI ACNGT 4 cut(s) 697, 1220, 1510, 1543
Bst6I CTCTTC 2 cut(s) 16, 753
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 5 cut(s) 25, 247, 318, 327, 726
BstDEI CTNAG 3 cut(s) 222, 528, 783
BstDSI CCRYGG 2 cut(s) 555, 711
BstENI CCTNNNNNAGG 1 cut(s) 148
BstF5I GGATG 6 cut(s) 565, 648, 721, 1118, 1208, 1525
BstFNI CGCG 3 cut(s) 134, 557, 1499
BstHHI GCGC 3 cut(s) 136, 980, 1499
BstKTI GATC 8 cut(s) 47, 158, 238, 360, 405, 922, 1114, 1515
BstMAI GTCTC 3 cut(s) 195, 924, 1307
BstMBI GATC 8 cut(s) 44, 155, 235, 357, 402, 919, 1111, 1512
BstMCI CGRYCG 1 cut(s) 47
BstMWI GCNNNNNNNGC 4 cut(s) 322, 326, 387, 1268
BstNI CCWGG 2 cut(s) 942, 975
BstSCI CCNGG 3 cut(s) 116, 940, 973
BstSFI CTRYAG 1 cut(s) 349
BstUI CGCG 3 cut(s) 134, 557, 1499
BstV1I GCAGC 4 cut(s) 499, 688, 1327, 1475
BstV2I GAAGAC 1 cut(s) 1287
BstX2I RGATCY 2 cut(s) 402, 919
BstYI RGATCY 2 cut(s) 402, 919
Bsu15I ATCGAT 1 cut(s) 360
BsuTUI ATCGAT 1 cut(s) 360
BtgI CCRYGG 2 cut(s) 555, 711
BtrI CACGTC 1 cut(s) 228
BtsCI GGATG 6 cut(s) 565, 648, 721, 1118, 1208, 1525
BtsIMutI CAGTG 3 cut(s) 106, 693, 1515
Cac8I GCNNGC 5 cut(s) 25, 247, 318, 327, 726
CaiI CAGNNNCTG 1 cut(s) 144
CfoI GCGC 3 cut(s) 136, 980, 1499
Cfr13I GGNCC 2 cut(s) 120, 628
Cfr42I CCGCGG 1 cut(s) 558
ClaI ATCGAT 1 cut(s) 360
Csp6I GTAC 3 cut(s) 552, 574, 1041
CviAII CATG 3 cut(s) 472, 712, 913
CviQI GTAC 3 cut(s) 552, 574, 1041
DdeI CTNAG 3 cut(s) 222, 528, 783
DpnI GATC 8 cut(s) 46, 157, 237, 359, 404, 921, 1113, 1514
DpnII GATC 8 cut(s) 44, 155, 235, 357, 402, 919, 1111, 1512
DraIII CACNNNGTG 1 cut(s) 601
Eam1104I CTCTTC 2 cut(s) 16, 753
EarI CTCTTC 2 cut(s) 16, 753
Eco130I CCWWGG 1 cut(s) 711
Eco24I GRGCYC 1 cut(s) 527
Eco32I GATATC 1 cut(s) 364
Eco47I GGWCC 2 cut(s) 120, 628
EcoNI CCTNNNNNAGG 1 cut(s) 148
EcoRI GAATTC 1 cut(s) 1375
EcoRII CCWGG 2 cut(s) 940, 973
EcoRV GATATC 1 cut(s) 364
EcoT14I CCWWGG 1 cut(s) 711
EcoT38I GRGCYC 1 cut(s) 527
ErhI CCWWGG 1 cut(s) 711
FaeI CATG 3 cut(s) 475, 715, 916
FalI AAGNNNNNCTT 2 cut(s) 1508, 1540
FaqI GGGAC 4 cut(s) 133, 158, 301, 641
FatI CATG 3 cut(s) 471, 711, 912
FauI CCCGC 1 cut(s) 183
FbaI TGATCA 1 cut(s) 1512
Fnu4HI GCNGC 6 cut(s) 88, 179, 513, 702, 1341, 1464
FokI GGATG 6 cut(s) 572, 655, 728, 1105, 1215, 1532
FriOI GRGCYC 1 cut(s) 527
Fsp4HI GCNGC 6 cut(s) 88, 179, 513, 702, 1341, 1464
FspBI CTAG 4 cut(s) 465, 1337, 1533, 1549
GlaI GCGC 3 cut(s) 135, 979, 1498
GluI GCNGC 6 cut(s) 88, 179, 513, 702, 1341, 1464
GsaI CCCAGC 4 cut(s) 141, 288, 520, 627
HapII CCGG 2 cut(s) 117, 250
HhaI GCGC 3 cut(s) 136, 980, 1499
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 3 cut(s) 475, 715, 916
Hin6I GCGC 3 cut(s) 134, 978, 1497
HinP1I GCGC 3 cut(s) 134, 978, 1497
HindIII AAGCTT 1 cut(s) 1005
HinfI GANTC 4 cut(s) 171, 209, 532, 1528
HpaII CCGG 2 cut(s) 117, 250
HphI GGTGA 2 cut(s) 28, 1220
Hpy188I TCNGA 2 cut(s) 208, 225
Hpy188III TCNNGA 7 cut(s) 42, 233, 239, 842, 929, 958, 1094
Hpy99I CGWCG 1 cut(s) 52
HpyAV CCTTC 3 cut(s) 485, 759, 811
HpyCH4III ACNGT 4 cut(s) 697, 1220, 1510, 1543
HpyCH4IV ACGT 2 cut(s) 227, 393
HpyCH4V TGCA 6 cut(s) 686, 947, 1064, 1257, 1343, 1456
HpyF10VI GCNNNNNNNGC 4 cut(s) 322, 326, 387, 1268
HpyF3I CTNAG 3 cut(s) 222, 528, 783
HpySE526I ACGT 2 cut(s) 227, 393
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 3 cut(s) 475, 715, 916
HspAI GCGC 3 cut(s) 134, 978, 1497
KpnI GGTACC 2 cut(s) 555, 1044
Ksp22I TGATCA 1 cut(s) 1512
KspI CCGCGG 1 cut(s) 558
Kzo9I GATC 8 cut(s) 44, 155, 235, 357, 402, 919, 1111, 1512
LmnI GCTCC 5 cut(s) 281, 341, 592, 799, 1298
Lsp1109I GCAGC 4 cut(s) 499, 688, 1327, 1475
LweI GCATC 7 cut(s) 232, 550, 673, 855, 1159, 1309, 1510
MaeI CTAG 4 cut(s) 465, 1337, 1533, 1549
MaeII ACGT 2 cut(s) 227, 393
MaeIII GTNAC 3 cut(s) 467, 1177, 1504
MalI GATC 8 cut(s) 46, 157, 237, 359, 404, 921, 1113, 1514
MboI GATC 8 cut(s) 44, 155, 235, 357, 402, 919, 1111, 1512
MboII GAAGA 5 cut(s) 3, 760, 770, 1043, 1292
MfeI CAATTG 1 cut(s) 538
MflI RGATCY 2 cut(s) 402, 919
MhlI GDGCHC 3 cut(s) 36, 527, 597
MluCI AATT 7 cut(s) 376, 424, 538, 1224, 1375, 1398, 1416
MlyI GAGTC 1 cut(s) 180
MmeI TCCRAC 1 cut(s) 585
MroXI GAANNNNTTC 1 cut(s) 969
MseI TTAA 1 cut(s) 1431
MslI CAYNNNNRTG 1 cut(s) 695
MspA1I CMGCKG 2 cut(s) 181, 557
MspI CCGG 2 cut(s) 117, 250
MspR9I CCNGG 3 cut(s) 118, 942, 975
MunI CAATTG 1 cut(s) 538
Mva1269I GAATGC 1 cut(s) 1414
MvaI CCWGG 2 cut(s) 942, 975
MvnI CGCG 3 cut(s) 134, 557, 1499
MwoI GCNNNNNNNGC 4 cut(s) 322, 326, 387, 1268
NciI CCSGG 1 cut(s) 118
NcoI CCATGG 1 cut(s) 711
NdeII GATC 8 cut(s) 44, 155, 235, 357, 402, 919, 1111, 1512
NlaIII CATG 3 cut(s) 475, 715, 916
NlaIV GGNNCC 4 cut(s) 121, 553, 629, 1042
NmuCI GTSAC 2 cut(s) 1177, 1504
PctI GAATGC 1 cut(s) 1414
PdmI GAANNNNTTC 1 cut(s) 969
PfeI GAWTC 3 cut(s) 209, 532, 1528
PfoI TCCNGGA 1 cut(s) 116
PkrI GCNGC 6 cut(s) 89, 180, 514, 703, 1342, 1465
Ple19I CGATCG 1 cut(s) 47
PleI GAGTC 1 cut(s) 179
PpsI GAGTC 1 cut(s) 179
Psp6I CCWGG 2 cut(s) 940, 973
PspFI CCCAGC 4 cut(s) 137, 284, 516, 623
PspGI CCWGG 2 cut(s) 940, 973
PspN4I GGNNCC 4 cut(s) 121, 553, 629, 1042
PspPI GGNCC 2 cut(s) 120, 628
PstNI CAGNNNCTG 1 cut(s) 144
PsuI RGATCY 2 cut(s) 402, 919
PvuI CGATCG 1 cut(s) 47
RsaI GTAC 3 cut(s) 553, 575, 1042
RsaNI GTAC 3 cut(s) 552, 574, 1041
RseI CAYNNNNRTG 1 cut(s) 695
SacII CCGCGG 1 cut(s) 558
SaqAI TTAA 1 cut(s) 1431
SatI GCNGC 6 cut(s) 88, 179, 513, 702, 1341, 1464
Sau3AI GATC 8 cut(s) 44, 155, 235, 357, 402, 919, 1111, 1512
Sau96I GGNCC 2 cut(s) 120, 628
ScaI AGTACT 1 cut(s) 575
SchI GAGTC 1 cut(s) 180
ScrFI CCNGG 3 cut(s) 118, 942, 975
SduI GDGCHC 3 cut(s) 36, 527, 597
SfaNI GCATC 7 cut(s) 232, 550, 673, 855, 1159, 1309, 1510
SfcI CTRYAG 1 cut(s) 349
Sfr303I CCGCGG 1 cut(s) 558
SgrBI CCGCGG 1 cut(s) 558
SinI GGWCC 2 cut(s) 120, 628
SmiMI CAYNNNNRTG 1 cut(s) 695
Sse9I AATT 7 cut(s) 376, 424, 538, 1224, 1375, 1398, 1416
SspMI CTAG 4 cut(s) 465, 1337, 1533, 1549
StyD4I CCNGG 3 cut(s) 116, 940, 973
StyI CCWWGG 1 cut(s) 711
TaaI ACNGT 4 cut(s) 697, 1220, 1510, 1543
TaiI ACGT 2 cut(s) 230, 396
TaqI TCGA 6 cut(s) 14, 65, 360, 928, 1414, 1446
TaqII GACCGA 1 cut(s) 1239
TasI AATT 7 cut(s) 376, 424, 538, 1224, 1375, 1398, 1416
TatI WGTACW 1 cut(s) 573
TauI GCSGC 2 cut(s) 90, 181
TfiI GAWTC 3 cut(s) 209, 532, 1528
Tru1I TTAA 1 cut(s) 1431
Tru9I TTAA 1 cut(s) 1431
TscAI CASTG 3 cut(s) 106, 700, 1515
TseFI GTSAC 2 cut(s) 1177, 1504
TseI GCWGC 4 cut(s) 512, 701, 1340, 1463
Tsp45I GTSAC 2 cut(s) 1177, 1504
TspDTI ATGAA 5 cut(s) 761, 771, 830, 1107, 1477
TspGWI ACGGA 1 cut(s) 1494
TspRI CASTG 3 cut(s) 106, 700, 1515
VpaK11BI GGWCC 2 cut(s) 120, 628
XagI CCTNNNNNAGG 1 cut(s) 148
XapI RAATTY 2 cut(s) 1224, 1375
XcmI CCANNNNNNNNNTGG 1 cut(s) 1238
XmnI GAANNNNTTC 1 cut(s) 969
XspI CTAG 4 cut(s) 465, 1337, 1533, 1549
ZrmI AGTACT 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.