Rroxscaffold_2G00093840

This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0011236
Physical Location & Seq
Forward (+)
15177018 .. 15180391
3374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00093840.1

Sequence Viewer

Length: 1650 bp
ATGGCTTCCTCAACAATGGCAGCGAACGGGGCTCTCACTCTCCGGTCATCCACGTATGCCAATGCTTCGAATCAAACCCAGAAAACGAATCCGGCCTCCGCGGCGAGAGGGCTCTCGTTCAGCGGGTCGCATCTCTCCGGTGCCAAAATCCCGACCCCGACCACGTGTTTGAGGACTTCACCCAACAACACGCAAAGGGCGCCATTGGTGGTGTCTCCGAAGGCCGTTTCGGATTCCAAGAACGCCCAGACGTGTCTTGATCCCGATGCGAGCAGAAGTGTGTTGGGGATTATACTGGGAGGTGGAGCCGGGACGAGGCTTTACCCGTTGACGAAGAAGCGTGCGAAGCCTGCTGTTCCATTGGGAGCGAATTACAGGCTGATTGATATTCCGGTCAGCAATTGTCTCAACAGCAATGTTTCCAAGATCTACGTCCTCACACAGTTCAATTCCGCTTCTCTTAATCGCCATCTCTCTCGTGCTTATGCCAGCAATATGGGAGGGTACAAAAATGAAGGCTTTGTTGAAGTGCTCGCGGCGCAGCAGAGTCCCGAGAATCCCAATTGGTTTCAGGGTACTGCAGATGCTGTGAGGCAGTATTTGTGGTTGTTTGAAGAACACAATGTGCTGGAGTTTTTGGTTCTTGCTGGGGACCATTTGTATAGGATGGACTATGAGAGGTTCATTCAGGCTCATAGAGAAACTGATGCAGATATCACTGTGGCTGCTCTGCCCATGGATGAGAAGCGTGCTACTGCCTTCGGCTTGATGAAGATTGATGATGAGGGTCGCATTATTGAGTTTGCTGAGAAGCCTAAAGGGGAGCAACTCAAAGCTATGAAGGTAGATACAACCATATTGGGTCTTGATGATGAGAGAGCCAAAGAGATGCCTTACATCGCCAGTATGGGTATATATGTTGTGAGCAAAAATGTGATGTTAGATCTGCTTCGAGAGAAGTTTCCTGGAGCAAATGATTTTGGGAGTGAAGTCATTCCTGGTGCAACTTCCATTGGGTTGAGGGTTCAAGCTTATCTGTATGATGGCTACTGGGAAGACATTGGTACCATTGAGGCTTTCTATAATGCTAATCTGGGGATAACTAAAAAGCCAATTCCTGATTTCAGCTTCTACGATCGTTCATCCCCGATCTACACCCAACCTCGGTATTTGCCCCCATCCAAAATGCTTGATGCTGATGTCACAGATAGTGTTATTGGCGAAGGTTGTGTGATAAAGAACTGTAAAATTCACCATTCTGTCGTTGGGCTTCGTTCTTGCATATCAGAAGGTGCTGTTATTGAAGACACATTACTGATGGGGGCAGACTACTATGAGAAATCTGGGGATTTCCACAGCTTAACATATATGTGGGTTGAATGGATAACTGATGCATTAATCATGATTGGCCAGACGGATGCTGACAGGAGGTATCTGGCTGGAAGAGGCAGTGTTCCAATTGGAATCGGAAAGAATTCTCACATTAAGAGAGCTATAATTGACAAGAATGCTCGAATTGGGGACAATGTGAAGATTGTCAACAGTGACAGTGTGCAAGAAGCTGCAAGAGAAACAGATGGATATTTCATCAAAAGCGGGATTGTCACAGTGATCAAGGATGCCTTGATTCCTAGTGGAACCGTAATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 ko00520 ko01100 ko01110 ko02026 map00500 map00520 map01100 map01110 map02026
Pfam Domains
Protein Families
NTP_transferase

Protein Analysis

549

Amino Acids

60.03

Weight (kDa)

6.35

Isoelectric Point (pI)

32.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NTP_transferase PF00483 96 - 369 1.7e-65 Nucleotidyl transferase
LbH_GLGC PF25247 389 - 450 2.7e-23 GLGC left-handed parallel beta-helix domain
LbH_GLGC PF25247 471 - 548 1.1e-23 GLGC left-handed parallel beta-helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011236)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48300
fragaria_vesca FvH4_6g40220
malus_domestica MD09G1133900.v1.1 MD17G1122400.v1.1 MD17G1122900.v1.1
prunus_persica Prupe.3G192600_v2.0.a1
pyrus_communis pycom09g05520 pycom17g11260 pycom17g11350 pycom17g11450
rosa_chinensis RchiOBHm_Chr2g0155241
rosa_laevigata RLG00000020829
rosa_multiflora Rmu_sc0012066.1_g000006
rosa_roxburghii Rroxscaffold_2G00093840
rosa_rugosa Rorug02G0446300
rosa_samantha Rh2AG512700 Rh2BG523300 Rh2CG497700 Rh2DG533000
rosa_wichuraiana Rw2G042120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1064
AccB1I GGYRCC 3 cut(s) 140, 199, 1064
AccII CGCG 2 cut(s) 101, 536
AciI CCGC 6 cut(s) 99, 101, 123, 453, 536, 1596
AclWI GGATC 1 cut(s) 254
AcoI YGGCCR 1 cut(s) 1408
AcsI RAATTY 2 cut(s) 1248, 1474
AcvI CACGTG 1 cut(s) 165
AcyI GRCGYC 1 cut(s) 200
AdeI CACNNNGTG 1 cut(s) 625
AfaI GTAC 3 cut(s) 506, 577, 1066
AfiI CCNNNNNNNGG 2 cut(s) 315, 1164
AflIII ACRYGT 2 cut(s) 164, 251
AgsI TTSAA 6 cut(s) 448, 527, 614, 1028, 1304, 1379
AjiI CACGTC 1 cut(s) 252
AjnI CCWGG 2 cut(s) 964, 997
AluBI AGCT 6 cut(s) 836, 1031, 1128, 1359, 1493, 1562
AluI AGCT 6 cut(s) 836, 1031, 1128, 1359, 1493, 1562
Alw21I GWGCWC 1 cut(s) 534
Alw26I GTCTC 2 cut(s) 219, 410
AlwI GGATC 1 cut(s) 254
AlwNI CAGNNNCTG 1 cut(s) 587
Ama87I CYCGRG 1 cut(s) 551
AoxI GGCC 3 cut(s) 93, 222, 1408
ApeKI GCWGC 4 cut(s) 20, 541, 725, 1562
ApoI RAATTY 2 cut(s) 1248, 1474
ArsI GACNNNNNNTTYG 2 cut(s) 151, 183
AseI ATTAAT 1 cut(s) 1397
Asp700I GAANNNNTTC 2 cut(s) 993, 1474
Asp718I GGTACC 1 cut(s) 1064
AspLEI GCGC 2 cut(s) 202, 541
AspS9I GGNCC 1 cut(s) 652
AsuC2I CCSGG 1 cut(s) 310
AsuHPI GGTGA 2 cut(s) 171, 1244
AsuII TTCGAA 1 cut(s) 68
AvaI CYCGRG 1 cut(s) 551
AvaII GGWCC 1 cut(s) 652
BaeI ACNNNNGTAYC 2 cut(s) 1048, 1081
BalI TGGCCA 1 cut(s) 1410
BanI GGYRCC 3 cut(s) 140, 199, 1064
BanII GRGCYC 2 cut(s) 34, 114
BarI GAAGNNNNNNTAC 2 cut(s) 1296, 1328
BauI CACGAG 1 cut(s) 477
BbrPI CACGTG 1 cut(s) 165
BbsI GAAGAC 2 cut(s) 1062, 1311
Bbv12I GWGCWC 1 cut(s) 534
BbvI GCAGC 4 cut(s) 32, 553, 712, 1549
BccI CCATC 6 cut(s) 477, 661, 1037, 1186, 1312, 1571
BceAI ACGGC 1 cut(s) 209
BciT130I CCWGG 2 cut(s) 966, 999
BclI TGATCA 1 cut(s) 1611
BcnI CCSGG 1 cut(s) 310
BcoDI GTCTC 2 cut(s) 219, 410
BfaI CTAG 1 cut(s) 1632
BfmI CTRYAG 1 cut(s) 579
BfoI RGCGCY 1 cut(s) 203
BglI GCCNNNNNGGC 1 cut(s) 101
BglII AGATCT 2 cut(s) 426, 943
BisI GCNGC 6 cut(s) 21, 102, 537, 542, 726, 1563
BlsI GCNGC 6 cut(s) 22, 103, 538, 543, 727, 1564
Bme1390I CCNGG 3 cut(s) 310, 966, 999
Bme18I GGWCC 1 cut(s) 652
BmeT110I CYCGRG 1 cut(s) 551
BmgBI CACGTC 1 cut(s) 252
BmgT120I GGNCC 1 cut(s) 652
BmiI GGNNCC 6 cut(s) 142, 201, 307, 653, 1066, 1639
BmrFI CCNGG 3 cut(s) 310, 966, 999
BmrI ACTGGG 2 cut(s) 305, 1060
BmsI GCATC 9 cut(s) 139, 256, 574, 697, 879, 1183, 1381, 1408, 1609
BmuI ACTGGG 2 cut(s) 305, 1060
BpiI GAAGAC 2 cut(s) 1062, 1311
BpmI CTGGAG 2 cut(s) 650, 987
Bpu14I TTCGAA 1 cut(s) 68
BpuMI CCSGG 1 cut(s) 310
BsaAI YACGTR 2 cut(s) 54, 165
BsaHI GRCGYC 1 cut(s) 200
BsaJI CCNNGG 3 cut(s) 99, 735, 1163
BsaWI WCCGGW 3 cut(s) 42, 137, 391
Bsc4I CCNNNNNNNGG 2 cut(s) 315, 1164
Bse1I ACTGG 3 cut(s) 300, 903, 1055
Bse3DI GCAATG 1 cut(s) 421
BseBI CCWGG 2 cut(s) 966, 999
BseDI CCNNGG 3 cut(s) 99, 735, 1163
BseGI GGATG 7 cut(s) 47, 672, 745, 1142, 1178, 1423, 1624
BseLI CCNNNNNNNGG 2 cut(s) 315, 1164
BseMI GCAATG 1 cut(s) 421
BseMII CTCAG 1 cut(s) 798
BseNI ACTGG 3 cut(s) 300, 903, 1055
BseXI GCAGC 4 cut(s) 32, 553, 712, 1549
BseYI CCCAGC 1 cut(s) 647
Bsh1236I CGCG 2 cut(s) 101, 536
Bsh1285I CGRYCG 1 cut(s) 1138
BshFI GGCC 3 cut(s) 95, 224, 1410
BshNI GGYRCC 3 cut(s) 140, 199, 1064
BsiEI CGRYCG 1 cut(s) 1138
BsiHKAI GWGCWC 1 cut(s) 534
BsiHKCI CYCGRG 1 cut(s) 551
BsiSI CCGG 5 cut(s) 43, 92, 138, 309, 392
BslFI GGGAC 4 cut(s) 325, 534, 665, 1535
BslI CCNNNNNNNGG 2 cut(s) 315, 1164
BsmAI GTCTC 2 cut(s) 219, 410
BsmFI GGGAC 4 cut(s) 325, 534, 665, 1535
BsmI GAATGC 1 cut(s) 1513
BsnI GGCC 3 cut(s) 95, 224, 1410
BsoBI CYCGRG 1 cut(s) 551
Bsp119I TTCGAA 1 cut(s) 68
Bsp1286I GDGCHC 3 cut(s) 34, 114, 534
Bsp143I GATC 6 cut(s) 259, 426, 943, 1135, 1149, 1611
Bsp19I CCATGG 1 cut(s) 735
BspACI CCGC 6 cut(s) 99, 101, 123, 453, 536, 1596
BspANI GGCC 3 cut(s) 95, 224, 1410
BspCNI CTCAG 1 cut(s) 799
BspFNI CGCG 2 cut(s) 101, 536
BspHI TCATGA 1 cut(s) 1401
BspLI GGNNCC 6 cut(s) 142, 201, 307, 653, 1066, 1639
BspMAI CTGCAG 1 cut(s) 583
BspPI GGATC 1 cut(s) 254
BspT104I TTCGAA 1 cut(s) 68
BspT107I GGYRCC 3 cut(s) 140, 199, 1064
BsrDI GCAATG 1 cut(s) 421
BsrI ACTGG 3 cut(s) 300, 903, 1055
BssECI CCNNGG 3 cut(s) 99, 735, 1163
BssMI GATC 6 cut(s) 259, 426, 943, 1135, 1149, 1611
BssNI GRCGYC 1 cut(s) 200
BssSI CACGAG 1 cut(s) 477
BssT1I CCWWGG 1 cut(s) 735
Bst2BI CACGAG 1 cut(s) 477
Bst2UI CCWGG 2 cut(s) 966, 999
Bst4CI ACNGT 7 cut(s) 444, 721, 1244, 1544, 1550, 1609, 1642
Bst6I CTCTTC 1 cut(s) 1438
BstACI GRCGYC 1 cut(s) 200
BstBAI YACGTR 2 cut(s) 54, 165
BstBI TTCGAA 1 cut(s) 68
BstC8I GCNNGC 6 cut(s) 271, 342, 351, 490, 534, 750
BstDEI CTNAG 1 cut(s) 807
BstDSI CCRYGG 2 cut(s) 99, 735
BstF5I GGATG 7 cut(s) 47, 672, 745, 1142, 1178, 1423, 1624
BstFNI CGCG 2 cut(s) 101, 536
BstH2I RGCGCY 1 cut(s) 203
BstHHI GCGC 2 cut(s) 202, 541
BstKTI GATC 6 cut(s) 262, 429, 946, 1138, 1152, 1614
BstMAI GTCTC 2 cut(s) 219, 410
BstMBI GATC 6 cut(s) 259, 426, 943, 1135, 1149, 1611
BstMCI CGRYCG 1 cut(s) 1138
BstMWI GCNNNNNNNGC 6 cut(s) 29, 101, 199, 346, 350, 538
BstNI CCWGG 2 cut(s) 966, 999
BstSCI CCNGG 3 cut(s) 308, 964, 997
BstSFI CTRYAG 1 cut(s) 579
BstUI CGCG 2 cut(s) 101, 536
BstV1I GCAGC 4 cut(s) 32, 553, 712, 1549
BstV2I GAAGAC 2 cut(s) 1062, 1311
BstX2I RGATCY 2 cut(s) 426, 943
BstXI CCANNNNNNTGG 1 cut(s) 496
BstYI RGATCY 2 cut(s) 426, 943
BsuRI GGCC 3 cut(s) 95, 224, 1410
BtgI CCRYGG 2 cut(s) 99, 735
BtgZI GCGATG 1 cut(s) 883
BtrI CACGTC 1 cut(s) 252
BtsCI GGATG 7 cut(s) 47, 672, 745, 1142, 1178, 1423, 1624
BtsI GCAGTG 1 cut(s) 1456
BtsIMutI CAGTG 5 cut(s) 717, 1456, 1549, 1555, 1614
Cac8I GCNNGC 6 cut(s) 271, 342, 351, 490, 534, 750
CaiI CAGNNNCTG 1 cut(s) 587
CciI TCATGA 1 cut(s) 1401
CfoI GCGC 2 cut(s) 202, 541
Cfr13I GGNCC 1 cut(s) 652
Cfr42I CCGCGG 1 cut(s) 102
Csp6I GTAC 3 cut(s) 505, 576, 1065
CviAII CATG 2 cut(s) 736, 1402
CviQI GTAC 3 cut(s) 505, 576, 1065
DdeI CTNAG 1 cut(s) 807
DinI GGCGCC 1 cut(s) 201
DpnI GATC 6 cut(s) 261, 428, 945, 1137, 1151, 1613
DpnII GATC 6 cut(s) 259, 426, 943, 1135, 1149, 1611
DraIII CACNNNGTG 1 cut(s) 625
EaeI YGGCCR 1 cut(s) 1408
Eam1104I CTCTTC 1 cut(s) 1438
EarI CTCTTC 1 cut(s) 1438
Eco130I CCWWGG 1 cut(s) 735
Eco24I GRGCYC 2 cut(s) 34, 114
Eco32I GATATC 1 cut(s) 715
Eco47I GGWCC 1 cut(s) 652
Eco72I CACGTG 1 cut(s) 165
Eco88I CYCGRG 1 cut(s) 551
EcoRI GAATTC 1 cut(s) 1474
EcoRII CCWGG 2 cut(s) 964, 997
EcoRV GATATC 1 cut(s) 715
EcoT14I CCWWGG 1 cut(s) 735
EcoT22I ATGCAT 1 cut(s) 1396
EcoT38I GRGCYC 2 cut(s) 34, 114
EgeI GGCGCC 1 cut(s) 201
EheI GGCGCC 1 cut(s) 201
ErhI CCWWGG 1 cut(s) 735
FaeI CATG 2 cut(s) 739, 1405
FalI AAGNNNNNCTT 2 cut(s) 1607, 1639
FaqI GGGAC 4 cut(s) 325, 534, 665, 1535
FatI CATG 2 cut(s) 735, 1401
FauI CCCGC 2 cut(s) 116, 1589
FbaI TGATCA 1 cut(s) 1611
Fnu4HI GCNGC 6 cut(s) 21, 102, 537, 542, 726, 1563
FokI GGATG 7 cut(s) 34, 679, 752, 1129, 1165, 1430, 1631
FriOI GRGCYC 2 cut(s) 34, 114
Fsp4HI GCNGC 6 cut(s) 21, 102, 537, 542, 726, 1563
FspBI CTAG 1 cut(s) 1632
GlaI GCGC 2 cut(s) 201, 540
GluI GCNGC 6 cut(s) 21, 102, 537, 542, 726, 1563
GsaI CCCAGC 1 cut(s) 651
GsuI CTGGAG 2 cut(s) 650, 987
HaeII RGCGCY 1 cut(s) 203
HaeIII GGCC 3 cut(s) 95, 224, 1410
HapII CCGG 5 cut(s) 43, 92, 138, 309, 392
HhaI GCGC 2 cut(s) 202, 541
Hin1I GRCGYC 1 cut(s) 200
Hin1II CATG 2 cut(s) 739, 1405
Hin6I GCGC 2 cut(s) 200, 539
HinP1I GCGC 2 cut(s) 200, 539
HincII GTYRAC 2 cut(s) 330, 1540
HindII GTYRAC 2 cut(s) 330, 1540
HindIII AAGCTT 1 cut(s) 1029
HinfI GANTC 7 cut(s) 70, 88, 233, 547, 556, 1464, 1627
HpaII CCGG 5 cut(s) 43, 92, 138, 309, 392
HphI GGTGA 2 cut(s) 171, 1244
Hpy166II GTNNAC 2 cut(s) 330, 1540
Hpy188I TCNGA 4 cut(s) 219, 232, 1288, 1469
Hpy188III TCNNGA 8 cut(s) 151, 257, 263, 551, 866, 953, 1118, 1402
Hpy8I GTNNAC 2 cut(s) 330, 1540
HpyAV CCTTC 6 cut(s) 214, 509, 769, 835, 1217, 1283
HpyCH4III ACNGT 7 cut(s) 444, 721, 1244, 1544, 1550, 1609, 1642
HpyCH4IV ACGT 4 cut(s) 53, 164, 251, 432
HpyCH4V TGCA 7 cut(s) 581, 710, 1004, 1281, 1394, 1555, 1565
HpyF10VI GCNNNNNNNGC 6 cut(s) 29, 101, 199, 346, 350, 538
HpyF3I CTNAG 1 cut(s) 807
HpySE526I ACGT 4 cut(s) 53, 164, 251, 432
Hsp92I GRCGYC 1 cut(s) 200
Hsp92II CATG 2 cut(s) 739, 1405
HspAI GCGC 2 cut(s) 200, 539
KasI GGCGCC 1 cut(s) 199
KpnI GGTACC 1 cut(s) 1068
Ksp22I TGATCA 1 cut(s) 1611
KspI CCGCGG 1 cut(s) 102
Kzo9I GATC 6 cut(s) 259, 426, 943, 1135, 1149, 1611
LmnI GCTCC 4 cut(s) 305, 365, 823, 968
Lsp1109I GCAGC 4 cut(s) 32, 553, 712, 1549
LweI GCATC 9 cut(s) 139, 256, 574, 697, 879, 1183, 1381, 1408, 1609
MaeI CTAG 1 cut(s) 1632
MaeII ACGT 4 cut(s) 53, 164, 251, 432
MaeIII GTNAC 3 cut(s) 1201, 1544, 1603
MalI GATC 6 cut(s) 261, 428, 945, 1137, 1151, 1613
MboI GATC 6 cut(s) 259, 426, 943, 1135, 1149, 1611
MboII GAAGA 7 cut(s) 346, 626, 784, 1067, 1316, 1455, 1543
MfeI CAATTG 3 cut(s) 400, 562, 1458
MflI RGATCY 2 cut(s) 426, 943
MhlI GDGCHC 3 cut(s) 34, 114, 534
MlsI TGGCCA 1 cut(s) 1410
MluNI TGGCCA 1 cut(s) 1410
Mly113I GGCGCC 1 cut(s) 200
MlyI GAGTC 1 cut(s) 556
Mox20I TGGCCA 1 cut(s) 1410
Mph1103I ATGCAT 1 cut(s) 1396
MroXI GAANNNNTTC 2 cut(s) 993, 1474
MscI TGGCCA 1 cut(s) 1410
MseI TTAA 4 cut(s) 462, 1361, 1397, 1485
MslI CAYNNNNRTG 1 cut(s) 1369
Msp20I TGGCCA 1 cut(s) 1410
MspA1I CMGCKG 2 cut(s) 101, 123
MspI CCGG 5 cut(s) 43, 92, 138, 309, 392
MspR9I CCNGG 3 cut(s) 310, 966, 999
MunI CAATTG 3 cut(s) 400, 562, 1458
Mva1269I GAATGC 1 cut(s) 1513
MvaI CCWGG 2 cut(s) 966, 999
MvnI CGCG 2 cut(s) 101, 536
MwoI GCNNNNNNNGC 6 cut(s) 29, 101, 199, 346, 350, 538
NarI GGCGCC 1 cut(s) 200
NciI CCSGG 1 cut(s) 310
NcoI CCATGG 1 cut(s) 735
NdeII GATC 6 cut(s) 259, 426, 943, 1135, 1149, 1611
NlaIII CATG 2 cut(s) 739, 1405
NlaIV GGNNCC 6 cut(s) 142, 201, 307, 653, 1066, 1639
NmuCI GTSAC 3 cut(s) 1201, 1544, 1603
NsiI ATGCAT 1 cut(s) 1396
NspV TTCGAA 1 cut(s) 68
PagI TCATGA 1 cut(s) 1401
PctI GAATGC 1 cut(s) 1513
PdmI GAANNNNTTC 2 cut(s) 993, 1474
PfeI GAWTC 6 cut(s) 70, 88, 233, 556, 1464, 1627
PfoI TCCNGGA 1 cut(s) 964
PkrI GCNGC 6 cut(s) 22, 103, 538, 543, 727, 1564
Ple19I CGATCG 1 cut(s) 1138
PleI GAGTC 1 cut(s) 555
PluTI GGCGCC 1 cut(s) 203
PmaCI CACGTG 1 cut(s) 165
PmlI CACGTG 1 cut(s) 165
PpsI GAGTC 1 cut(s) 555
Ppu21I YACGTR 2 cut(s) 54, 165
PshBI ATTAAT 1 cut(s) 1397
Psp6I CCWGG 2 cut(s) 964, 997
PspCI CACGTG 1 cut(s) 165
PspFI CCCAGC 1 cut(s) 647
PspGI CCWGG 2 cut(s) 964, 997
PspN4I GGNNCC 6 cut(s) 142, 201, 307, 653, 1066, 1639
PspPI GGNCC 1 cut(s) 652
PstI CTGCAG 1 cut(s) 583
PstNI CAGNNNCTG 1 cut(s) 587
PsuI RGATCY 2 cut(s) 426, 943
PvuI CGATCG 1 cut(s) 1138
RsaI GTAC 3 cut(s) 506, 577, 1066
RsaNI GTAC 3 cut(s) 505, 576, 1065
RseI CAYNNNNRTG 1 cut(s) 1369
SacII CCGCGG 1 cut(s) 102
SaqAI TTAA 4 cut(s) 462, 1361, 1397, 1485
SatI GCNGC 6 cut(s) 21, 102, 537, 542, 726, 1563
Sau3AI GATC 6 cut(s) 259, 426, 943, 1135, 1149, 1611
Sau96I GGNCC 1 cut(s) 652
SchI GAGTC 1 cut(s) 556
ScrFI CCNGG 3 cut(s) 310, 966, 999
SduI GDGCHC 3 cut(s) 34, 114, 534
SfaNI GCATC 9 cut(s) 139, 256, 574, 697, 879, 1183, 1381, 1408, 1609
SfcI CTRYAG 1 cut(s) 579
SfoI GGCGCC 1 cut(s) 201
Sfr303I CCGCGG 1 cut(s) 102
SfuI TTCGAA 1 cut(s) 68
SgrBI CCGCGG 1 cut(s) 102
SinI GGWCC 1 cut(s) 652
SmiMI CAYNNNNRTG 1 cut(s) 1369
SsiI CCGC 6 cut(s) 99, 101, 123, 453, 536, 1596
SspDI GGCGCC 1 cut(s) 199
SspMI CTAG 1 cut(s) 1632
StyD4I CCNGG 3 cut(s) 308, 964, 997
StyI CCWWGG 1 cut(s) 735
TaaI ACNGT 7 cut(s) 444, 721, 1244, 1544, 1550, 1609, 1642
TaiI ACGT 4 cut(s) 56, 167, 254, 435
TaqI TCGA 3 cut(s) 68, 952, 1513
TauI GCSGC 2 cut(s) 104, 539
TfiI GAWTC 6 cut(s) 70, 88, 233, 556, 1464, 1627
Tru1I TTAA 4 cut(s) 462, 1361, 1397, 1485
Tru9I TTAA 4 cut(s) 462, 1361, 1397, 1485
TscAI CASTG 5 cut(s) 724, 1456, 1549, 1555, 1614
TseFI GTSAC 3 cut(s) 1201, 1544, 1603
TseI GCWGC 4 cut(s) 20, 541, 725, 1562
Tsp45I GTSAC 3 cut(s) 1201, 1544, 1603
TspDTI ATGAA 6 cut(s) 528, 673, 785, 854, 1131, 1576
TspGWI ACGGA 1 cut(s) 1430
TspRI CASTG 5 cut(s) 724, 1456, 1549, 1555, 1614
VpaK11BI GGWCC 1 cut(s) 652
VspI ATTAAT 1 cut(s) 1397
XapI RAATTY 2 cut(s) 1248, 1474
XcmI CCANNNNNNNNNTGG 1 cut(s) 1262
XmnI GAANNNNTTC 2 cut(s) 993, 1474
XspI CTAG 1 cut(s) 1632
Zsp2I ATGCAT 1 cut(s) 1396
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.