Prupe.3G192600_v2.0.a1

This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0011236
Physical Location & Seq
Reverse (-)
20466452 .. 20470025
3574 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G192600.1

Sequence Viewer

Length: 1575 bp
ATGGCTTCCTCTTCAATGGCAGCGAGCGGAGTGCTCAGGCCCCGATCATCGTCGATGTTCCCGAATGCTTTGAAGCAGACCCAGAACGCGAGTCTCTGCAGAAGCAGCAGAGGCCTCTCCTTTAGTGGCTCTCATCTCTCCGGGACCAAAATCCCAACAGCCAGCACTTGTTTGAGGAAATGCCCCACTCACAGAGCCCCACCATTGGTTGTGTCTCCGAAGGCTGTTTCGGATTCAAAGAACTCGCAGACGTGTCTTGATCCCGACGCAAGCCGTAGTGTGTTGGGGATTATACTGGGTGGTGGAGCTGGGACGAGGCTCTACCCCTTGACCAAGAAGCGTGCAAAGCCTGCCGTTCCATTGGGAGCAAACTACAGGCTGATCGATATTCCAGTCAGTAATTGCCTCAACAGCAACGTATCCAAGATCTATGTGCTGACCCAGTTCAATTCCGCCTCTCTGAATCGCCATCTTTCTCGTGCTTATGCTAGTAACATGGGTGGATATAAAAATGAAGGCTTTGTTGAGGTTCTTGCAGCCCAACAGAGCCCAGAAAATCCCAATTGGTTTCAGGGTACCGCAGATGCCGTGAGGCAGTACTTGTGGTTGTTTGAGGAACACAATGTGTTGGAGTTTTTGGTTCTTGCTGGAGACCACTTGTATAGGATGGACTATGAGAGGTTTATTCAGGCACATAGAGAAACTGATGCAGATATCACTGTGGCTGCTCTGCCCATGGATGAGAAGCGTGCTACTGCCTTTGGTTTGATGAAGATTGACGACGAGGGACGCATTATTGAGTTTGCTGAGAAACCTAAAGGGGAGCAACTCAAAGCTATGCAGGTTGATACTACTATCTTGGGTCTTGACGATCAGAGAGCTAAAGAGATGCCTTATATTGCTAGTATGGGTATATATGTTGTGAGCAAAAATGTGATGTTAGATCTACTTCGGGACAAGTTTCCTGGAGCAAATGATTTTGGGAGTGAAGTTATTCCAGGTGCGACTTCCATGGGTTTGAGAGTTCAAGCCTATCTGTATGATGGCTACTGGGAAGACATTGGTACCATTGAGGCTTTCTACAATGCAAATTTAGGGATAACCAAAAAACCAGTTCCAGATTTCAGCTTCTATGATCGTTCCTCCCCAATCTACACCCAACCTCGGTATTTGCCTCCATCAAAGATGCTCGATGCTGATGTCACAGATAGTGTTATTGGCGAGGGATGTGTGATAAAGAACTGTAAAATTCACCATTCAGTCGTTGGGCTTCGATCTTGTATTTCGGAGGGTGCTGTCATTGAGGACACATTACTGATGGGAGCAGACTACTATGAGACGGATGCTGACAGGAGGTTTCTGGCTGCAAAGGGTAGTGTTCCAATTGGTATTGGCAAGAGTTCTCACATTAAGAGAGCTATAATTGACAAGAATGCTCGAATTGGCGACAATGTGAAGATTATTAACAGTGACAATGTGCAAGAAGCTGCGAGAGAAACGGATGGATATTTCATAAAGAGCGGGATCGTGACAGTGATCAAGGATGCCTTGATTCCCAGTGGAACAGTAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00500 ko00520 ko01100 ko01110 ko02026 map00500 map00520 map01100 map01110 map02026
Pfam Domains
Protein Families
NTP_transferase

Protein Analysis

525

Amino Acids

57.27

Weight (kDa)

7.99

Isoelectric Point (pI)

37.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011236)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48300
fragaria_vesca FvH4_6g40220
malus_domestica MD09G1133900.v1.1 MD17G1122400.v1.1 MD17G1122900.v1.1
prunus_persica Prupe.3G192600_v2.0.a1
pyrus_communis pycom09g05520 pycom17g11260 pycom17g11350 pycom17g11450
rosa_chinensis RchiOBHm_Chr2g0155241
rosa_laevigata RLG00000020829
rosa_multiflora Rmu_sc0012066.1_g000006
rosa_roxburghii Rroxscaffold_2G00093840
rosa_rugosa Rorug02G0446300
rosa_samantha Rh2AG512700 Rh2BG523300 Rh2CG497700 Rh2DG533000
rosa_wichuraiana Rw2G042120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 832
Acc65I GGTACC 2 cut(s) 575, 1064
AccB1I GGYRCC 2 cut(s) 575, 1064
AccBSI CCGCTC 2 cut(s) 27, 1521
AccII CGCG 1 cut(s) 89
AciI CCGC 4 cut(s) 27, 453, 579, 1521
AclWI GGATC 2 cut(s) 254, 1532
AcsI RAATTY 2 cut(s) 1090, 1248
AdeI CACNNNGTG 1 cut(s) 625
AfaI GTAC 3 cut(s) 577, 599, 1066
AfiI CCNNNNNNNGG 2 cut(s) 205, 1164
AflIII ACRYGT 1 cut(s) 251
AgsI TTSAA 5 cut(s) 15, 73, 237, 448, 1028
AjiI CACGTC 1 cut(s) 252
AjnI CCWGG 2 cut(s) 964, 997
AluBI AGCT 6 cut(s) 308, 836, 881, 1128, 1418, 1487
AluI AGCT 6 cut(s) 308, 836, 881, 1128, 1418, 1487
Alw21I GWGCWC 1 cut(s) 36
Alw26I GTCTC 4 cut(s) 98, 219, 645, 1331
AlwI GGATC 2 cut(s) 254, 1532
AoxI GGCC 2 cut(s) 38, 112
ApeKI GCWGC 6 cut(s) 20, 105, 536, 725, 1364, 1487
ApoI RAATTY 2 cut(s) 1090, 1248
Asp700I GAANNNNTTC 1 cut(s) 993
Asp718I GGTACC 2 cut(s) 575, 1064
AspS9I GGNCC 2 cut(s) 39, 144
AsuC2I CCSGG 1 cut(s) 142
AsuHPI GGTGA 1 cut(s) 1244
AvaII GGWCC 1 cut(s) 144
BaeI ACNNNNGTAYC 2 cut(s) 1048, 1081
BanI GGYRCC 2 cut(s) 575, 1064
BanII GRGCYC 2 cut(s) 199, 551
BauI CACGAG 1 cut(s) 477
BbsI GAAGAC 1 cut(s) 1062
Bbv12I GWGCWC 1 cut(s) 36
BbvI GCAGC 6 cut(s) 32, 117, 548, 712, 1351, 1474
BccI CCATC 6 cut(s) 477, 661, 1037, 1186, 1312, 1496
BceAI ACGGC 3 cut(s) 258, 338, 572
BcgI CGANNNNNNTGC 2 cut(s) 13, 47
BciT130I CCWGG 2 cut(s) 966, 999
BciVI GTATCC 1 cut(s) 430
BclI TGATCA 1 cut(s) 1536
BcnI CCSGG 1 cut(s) 142
BcoDI GTCTC 4 cut(s) 98, 219, 645, 1331
BfaI CTAG 3 cut(s) 489, 903, 1573
BfmI CTRYAG 2 cut(s) 97, 373
BfuAI ACCTGC 1 cut(s) 832
BfuI GTATCC 1 cut(s) 430
BglII AGATCT 2 cut(s) 426, 943
BisI GCNGC 6 cut(s) 21, 106, 537, 726, 1365, 1488
BlsI GCNGC 6 cut(s) 22, 107, 538, 727, 1366, 1489
BmcAI AGTACT 1 cut(s) 599
Bme1390I CCNGG 3 cut(s) 142, 966, 999
Bme18I GGWCC 1 cut(s) 144
BmgBI CACGTC 1 cut(s) 252
BmgT120I GGNCC 2 cut(s) 39, 144
BmiI GGNNCC 4 cut(s) 41, 145, 577, 1066
BmrFI CCNGG 3 cut(s) 142, 966, 999
BmrI ACTGGG 4 cut(s) 305, 436, 1060, 1551
BmsI GCATC 7 cut(s) 574, 697, 879, 1176, 1183, 1333, 1534
BmuI ACTGGG 4 cut(s) 305, 436, 1060, 1551
BpiI GAAGAC 1 cut(s) 1062
BpmI CTGGAG 2 cut(s) 669, 987
Bpu10I CCTNAGC 1 cut(s) 35
BpuMI CCSGG 1 cut(s) 142
Bsa29I ATCGAT 1 cut(s) 384
BsaI GGTCTC 1 cut(s) 645
BsaJI CCNNGG 3 cut(s) 735, 1011, 1163
Bsc4I CCNNNNNNNGG 2 cut(s) 205, 1164
Bse1I ACTGG 6 cut(s) 300, 392, 442, 1055, 1112, 1557
BseBI CCWGG 2 cut(s) 966, 999
BseCI ATCGAT 1 cut(s) 384
BseDI CCNNGG 3 cut(s) 735, 1011, 1163
BseGI GGATG 6 cut(s) 672, 745, 1232, 1348, 1507, 1549
BseLI CCNNNNNNNGG 2 cut(s) 205, 1164
BseMII CTCAG 2 cut(s) 49, 798
BseNI ACTGG 6 cut(s) 300, 392, 442, 1055, 1112, 1557
BseXI GCAGC 6 cut(s) 32, 117, 548, 712, 1351, 1474
BseYI CCCAGC 1 cut(s) 308
Bsh1236I CGCG 1 cut(s) 89
BshFI GGCC 2 cut(s) 40, 114
BshNI GGYRCC 2 cut(s) 575, 1064
BshVI ATCGAT 1 cut(s) 384
BsiHKAI GWGCWC 1 cut(s) 36
BsiSI CCGG 1 cut(s) 141
BslFI GGGAC 4 cut(s) 157, 325, 801, 968
BslI CCNNNNNNNGG 2 cut(s) 205, 1164
BsmAI GTCTC 4 cut(s) 98, 219, 645, 1331
BsmBI CGTCTC 1 cut(s) 1331
BsmFI GGGAC 4 cut(s) 157, 325, 801, 968
BsmI GAATGC 2 cut(s) 70, 1438
BsnI GGCC 2 cut(s) 40, 114
Bso31I GGTCTC 1 cut(s) 645
Bsp1286I GDGCHC 3 cut(s) 36, 199, 551
Bsp19I CCATGG 2 cut(s) 735, 1011
BspACI CCGC 4 cut(s) 27, 453, 579, 1521
BspANI GGCC 2 cut(s) 40, 114
BspCNI CTCAG 2 cut(s) 48, 799
BspDI ATCGAT 1 cut(s) 384
BspFNI CGCG 1 cut(s) 89
BspLI GGNNCC 4 cut(s) 41, 145, 577, 1066
BspMAI CTGCAG 1 cut(s) 101
BspMI ACCTGC 1 cut(s) 832
BspPI GGATC 2 cut(s) 254, 1532
BspT107I GGYRCC 2 cut(s) 575, 1064
BspTNI GGTCTC 1 cut(s) 645
BsrBI CCGCTC 2 cut(s) 27, 1521
BsrI ACTGG 6 cut(s) 300, 392, 442, 1055, 1112, 1557
BssECI CCNNGG 3 cut(s) 735, 1011, 1163
BssSI CACGAG 1 cut(s) 477
BssT1I CCWWGG 2 cut(s) 735, 1011
Bst2BI CACGAG 1 cut(s) 477
Bst2UI CCWGG 2 cut(s) 966, 999
Bst4CI ACNGT 5 cut(s) 721, 1244, 1469, 1534, 1567
Bst6I CTCTTC 1 cut(s) 16
BstAPI GCANNNNNTGC 1 cut(s) 350
BstC8I GCNNGC 6 cut(s) 25, 163, 271, 342, 351, 750
BstDEI CTNAG 2 cut(s) 35, 807
BstDSI CCRYGG 2 cut(s) 735, 1011
BstF5I GGATG 6 cut(s) 672, 745, 1232, 1348, 1507, 1549
BstFNI CGCG 1 cut(s) 89
BstMAI GTCTC 4 cut(s) 98, 219, 645, 1331
BstMWI GCNNNNNNNGC 5 cut(s) 105, 111, 346, 350, 411
BstNI CCWGG 2 cut(s) 966, 999
BstSCI CCNGG 3 cut(s) 140, 964, 997
BstSFI CTRYAG 2 cut(s) 97, 373
BstUI CGCG 1 cut(s) 89
BstV1I GCAGC 6 cut(s) 32, 117, 548, 712, 1351, 1474
BstV2I GAAGAC 1 cut(s) 1062
BstX2I RGATCY 2 cut(s) 426, 943
BstYI RGATCY 2 cut(s) 426, 943
Bsu15I ATCGAT 1 cut(s) 384
BsuI GTATCC 1 cut(s) 430
BsuRI GGCC 2 cut(s) 40, 114
BsuTUI ATCGAT 1 cut(s) 384
BtgI CCRYGG 2 cut(s) 735, 1011
BtrI CACGTC 1 cut(s) 252
BtsCI GGATG 6 cut(s) 672, 745, 1232, 1348, 1507, 1549
BtsIMutI CAGTG 4 cut(s) 717, 1474, 1539, 1564
BveI ACCTGC 1 cut(s) 832
Cac8I GCNNGC 6 cut(s) 25, 163, 271, 342, 351, 750
Cfr13I GGNCC 2 cut(s) 39, 144
ClaI ATCGAT 1 cut(s) 384
CseI GACGC 2 cut(s) 275, 798
Csp6I GTAC 3 cut(s) 576, 598, 1065
CviAII CATG 3 cut(s) 496, 736, 1012
CviQI GTAC 3 cut(s) 576, 598, 1065
DdeI CTNAG 2 cut(s) 35, 807
DraIII CACNNNGTG 1 cut(s) 625
Eam1104I CTCTTC 1 cut(s) 16
EarI CTCTTC 1 cut(s) 16
EciI GGCGGA 1 cut(s) 442
Eco130I CCWWGG 2 cut(s) 735, 1011
Eco147I AGGCCT 1 cut(s) 114
Eco24I GRGCYC 2 cut(s) 199, 551
Eco31I GGTCTC 1 cut(s) 645
Eco32I GATATC 1 cut(s) 715
Eco47I GGWCC 1 cut(s) 144
EcoO109I RGGNCCY 1 cut(s) 39
EcoRII CCWGG 2 cut(s) 964, 997
EcoRV GATATC 1 cut(s) 715
EcoT14I CCWWGG 2 cut(s) 735, 1011
EcoT38I GRGCYC 2 cut(s) 199, 551
ErhI CCWWGG 2 cut(s) 735, 1011
Esp3I CGTCTC 1 cut(s) 1331
FaeI CATG 3 cut(s) 499, 739, 1015
FalI AAGNNNNNCTT 2 cut(s) 1532, 1564
FaqI GGGAC 4 cut(s) 157, 325, 801, 968
FatI CATG 3 cut(s) 495, 735, 1011
FauI CCCGC 1 cut(s) 1514
FbaI TGATCA 1 cut(s) 1536
Fnu4HI GCNGC 6 cut(s) 21, 106, 537, 726, 1365, 1488
FokI GGATG 6 cut(s) 679, 752, 1239, 1355, 1514, 1556
FriOI GRGCYC 2 cut(s) 199, 551
Fsp4HI GCNGC 6 cut(s) 21, 106, 537, 726, 1365, 1488
FspBI CTAG 3 cut(s) 489, 903, 1573
GluI GCNGC 6 cut(s) 21, 106, 537, 726, 1365, 1488
GsaI CCCAGC 1 cut(s) 312
GsuI CTGGAG 2 cut(s) 669, 987
HaeIII GGCC 2 cut(s) 40, 114
HapII CCGG 1 cut(s) 141
HgaI GACGC 2 cut(s) 275, 798
Hin1II CATG 3 cut(s) 499, 739, 1015
HinfI GANTC 4 cut(s) 91, 233, 463, 1552
HpaII CCGG 1 cut(s) 141
HphI GGTGA 1 cut(s) 1244
Hpy188I TCNGA 5 cut(s) 219, 232, 462, 876, 1288
Hpy188III TCNNGA 7 cut(s) 61, 257, 263, 866, 953, 1118, 1528
Hpy99I CGWCG 3 cut(s) 55, 269, 785
HpyAV CCTTC 2 cut(s) 214, 509
HpyCH4III ACNGT 5 cut(s) 721, 1244, 1469, 1534, 1567
HpyCH4IV ACGT 2 cut(s) 251, 417
HpyCH4V TGCA 8 cut(s) 99, 344, 536, 710, 841, 1088, 1367, 1480
HpyF10VI GCNNNNNNNGC 5 cut(s) 105, 111, 346, 350, 411
HpyF3I CTNAG 2 cut(s) 35, 807
HpySE526I ACGT 2 cut(s) 251, 417
Hsp92II CATG 3 cut(s) 499, 739, 1015
KpnI GGTACC 2 cut(s) 579, 1068
Ksp22I TGATCA 1 cut(s) 1536
LmnI GCTCC 5 cut(s) 305, 365, 823, 968, 1322
Lsp1109I GCAGC 6 cut(s) 32, 117, 548, 712, 1351, 1474
LweI GCATC 7 cut(s) 574, 697, 879, 1176, 1183, 1333, 1534
MaeI CTAG 3 cut(s) 489, 903, 1573
MaeII ACGT 2 cut(s) 251, 417
MaeIII GTNAC 4 cut(s) 491, 1201, 1469, 1528
MbiI CCGCTC 2 cut(s) 27, 1521
MboII GAAGA 4 cut(s) 3, 784, 1067, 1468
MfeI CAATTG 2 cut(s) 562, 1383
MflI RGATCY 2 cut(s) 426, 943
MhlI GDGCHC 3 cut(s) 36, 199, 551
MluCI AATT 8 cut(s) 400, 448, 562, 1090, 1248, 1383, 1422, 1440
MlyI GAGTC 1 cut(s) 100
MmeI TCCRAC 1 cut(s) 609
MroXI GAANNNNTTC 1 cut(s) 993
MseI TTAA 2 cut(s) 1410, 1464
MspI CCGG 1 cut(s) 141
MspR9I CCNGG 3 cut(s) 142, 966, 999
MunI CAATTG 2 cut(s) 562, 1383
Mva1269I GAATGC 2 cut(s) 70, 1438
MvaI CCWGG 2 cut(s) 966, 999
MvnI CGCG 1 cut(s) 89
MwoI GCNNNNNNNGC 5 cut(s) 105, 111, 346, 350, 411
NciI CCSGG 1 cut(s) 142
NcoI CCATGG 2 cut(s) 735, 1011
NlaIII CATG 3 cut(s) 499, 739, 1015
NlaIV GGNNCC 4 cut(s) 41, 145, 577, 1066
NmuCI GTSAC 3 cut(s) 1201, 1469, 1528
PceI AGGCCT 1 cut(s) 114
PcsI WCGNNNNNNNCGW 1 cut(s) 59
PctI GAATGC 2 cut(s) 70, 1438
PdmI GAANNNNTTC 1 cut(s) 993
PfeI GAWTC 3 cut(s) 233, 463, 1552
PfoI TCCNGGA 2 cut(s) 140, 964
PkrI GCNGC 6 cut(s) 22, 107, 538, 727, 1366, 1489
PleI GAGTC 1 cut(s) 99
PpsI GAGTC 1 cut(s) 99
Psp6I CCWGG 2 cut(s) 964, 997
PspFI CCCAGC 1 cut(s) 308
PspGI CCWGG 2 cut(s) 964, 997
PspN4I GGNNCC 4 cut(s) 41, 145, 577, 1066
PspPI GGNCC 2 cut(s) 39, 144
PstI CTGCAG 1 cut(s) 101
PsuI RGATCY 2 cut(s) 426, 943
RsaI GTAC 3 cut(s) 577, 599, 1066
RsaNI GTAC 3 cut(s) 576, 598, 1065
SaqAI TTAA 2 cut(s) 1410, 1464
SatI GCNGC 6 cut(s) 21, 106, 537, 726, 1365, 1488
Sau96I GGNCC 2 cut(s) 39, 144
ScaI AGTACT 1 cut(s) 599
SchI GAGTC 1 cut(s) 100
ScrFI CCNGG 3 cut(s) 142, 966, 999
SduI GDGCHC 3 cut(s) 36, 199, 551
SfaNI GCATC 7 cut(s) 574, 697, 879, 1176, 1183, 1333, 1534
SfcI CTRYAG 2 cut(s) 97, 373
SinI GGWCC 1 cut(s) 144
Sse9I AATT 8 cut(s) 400, 448, 562, 1090, 1248, 1383, 1422, 1440
SseBI AGGCCT 1 cut(s) 114
SsiI CCGC 4 cut(s) 27, 453, 579, 1521
SspMI CTAG 3 cut(s) 489, 903, 1573
StuI AGGCCT 1 cut(s) 114
StyD4I CCNGG 3 cut(s) 140, 964, 997
StyI CCWWGG 2 cut(s) 735, 1011
TaaI ACNGT 5 cut(s) 721, 1244, 1469, 1534, 1567
TaiI ACGT 2 cut(s) 254, 420
TaqI TCGA 5 cut(s) 53, 384, 1191, 1273, 1438
TasI AATT 8 cut(s) 400, 448, 562, 1090, 1248, 1383, 1422, 1440
TatI WGTACW 1 cut(s) 597
TfiI GAWTC 3 cut(s) 233, 463, 1552
Tru1I TTAA 2 cut(s) 1410, 1464
Tru9I TTAA 2 cut(s) 1410, 1464
TscAI CASTG 4 cut(s) 724, 1474, 1539, 1564
TseFI GTSAC 3 cut(s) 1201, 1469, 1528
TseI GCWGC 6 cut(s) 20, 105, 536, 725, 1364, 1487
Tsp45I GTSAC 3 cut(s) 1201, 1469, 1528
TspDTI ATGAA 3 cut(s) 528, 785, 1501
TspGWI ACGGA 2 cut(s) 1355, 1514
TspRI CASTG 4 cut(s) 724, 1474, 1539, 1564
VpaK11BI GGWCC 1 cut(s) 144
XapI RAATTY 2 cut(s) 1090, 1248
XcmI CCANNNNNNNNNTGG 1 cut(s) 1262
XmnI GAANNNNTTC 1 cut(s) 993
XspI CTAG 3 cut(s) 489, 903, 1573
ZrmI AGTACT 1 cut(s) 599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.