B-box zinc finger
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G78600 AT1G78600 |
| fragaria_vesca | FvH4_6g37790 |
| malus_domestica | MD09G1155900.v1.1 |
| prunus_persica | Prupe.8G109100_v2.0.a1 |
| pyrus_communis | pycom09g07470 |
| rosa_chinensis | RchiOBHm_Chr2g0150861 |
| rosa_laevigata | RLG00000020514 |
| rosa_multiflora | Rmu_sc0000185.1_g000012 Rmu_sc0007617.1_g000006 |
| rosa_rugosa | Rorug02G0423000 |
| rosa_samantha | Rh2AG483300 Rh2BG495700 Rh2CG469600 Rh2DG506600 |
| rosa_wichuraiana | Rw2G039610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 227 |
| AciI | CCGC | 2 cut(s) | 102, 420 |
| AcoI | YGGCCR | 1 cut(s) | 114 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 187 |
| AgsI | TTSAA | 1 cut(s) | 398 |
| AjnI | CCWGG | 1 cut(s) | 230 |
| AluBI | AGCT | 1 cut(s) | 299 |
| AluI | AGCT | 1 cut(s) | 299 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 461 |
| AoxI | GGCC | 2 cut(s) | 36, 114 |
| AspLEI | GCGC | 2 cut(s) | 56, 282 |
| BalI | TGGCCA | 1 cut(s) | 116 |
| BanI | GGYRCC | 1 cut(s) | 227 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 406, 438 |
| BccI | CCATC | 1 cut(s) | 254 |
| BciT130I | CCWGG | 1 cut(s) | 232 |
| BfaI | CTAG | 1 cut(s) | 354 |
| BisI | GCNGC | 1 cut(s) | 102 |
| BlsI | GCNGC | 1 cut(s) | 103 |
| Bme1390I | CCNGG | 1 cut(s) | 232 |
| BmiI | GGNNCC | 1 cut(s) | 229 |
| BmrFI | CCNGG | 1 cut(s) | 232 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 121, 153, 123, 155 |
| BsaJI | CCNNGG | 3 cut(s) | 39, 231, 429 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 187 |
| Bse1I | ACTGG | 2 cut(s) | 117, 382 |
| Bse3DI | GCAATG | 1 cut(s) | 22 |
| BseBI | CCWGG | 1 cut(s) | 232 |
| BseDI | CCNNGG | 3 cut(s) | 39, 231, 429 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 187 |
| BseMI | GCAATG | 1 cut(s) | 22 |
| BseNI | ACTGG | 2 cut(s) | 117, 382 |
| BseYI | CCCAGC | 1 cut(s) | 75 |
| BshFI | GGCC | 2 cut(s) | 38, 116 |
| BshNI | GGYRCC | 1 cut(s) | 227 |
| BslFI | GGGAC | 1 cut(s) | 119 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 187 |
| BsmFI | GGGAC | 1 cut(s) | 119 |
| BsmI | GAATGC | 1 cut(s) | 320 |
| BsnI | GGCC | 2 cut(s) | 38, 116 |
| Bsp143I | GATC | 1 cut(s) | 292 |
| BspACI | CCGC | 2 cut(s) | 102, 420 |
| BspANI | GGCC | 2 cut(s) | 38, 116 |
| BspLI | GGNNCC | 1 cut(s) | 229 |
| BspT107I | GGYRCC | 1 cut(s) | 227 |
| BsrDI | GCAATG | 1 cut(s) | 22 |
| BsrI | ACTGG | 2 cut(s) | 117, 382 |
| BssECI | CCNNGG | 3 cut(s) | 39, 231, 429 |
| BssMI | GATC | 1 cut(s) | 292 |
| BssT1I | CCWWGG | 2 cut(s) | 39, 429 |
| Bst2UI | CCWGG | 1 cut(s) | 232 |
| Bst4CI | ACNGT | 3 cut(s) | 12, 337, 457 |
| Bst6I | CTCTTC | 5 cut(s) | 148, 154, 212, 242, 264 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 21 |
| BstC8I | GCNNGC | 4 cut(s) | 22, 82, 118, 122 |
| BstHHI | GCGC | 2 cut(s) | 56, 282 |
| BstKTI | GATC | 1 cut(s) | 295 |
| BstMBI | GATC | 1 cut(s) | 292 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 21, 81, 177 |
| BstNI | CCWGG | 1 cut(s) | 232 |
| BstSCI | CCNGG | 1 cut(s) | 230 |
| BsuRI | GGCC | 2 cut(s) | 38, 116 |
| BtgZI | GCGATG | 1 cut(s) | 333 |
| BtsIMutI | CAGTG | 1 cut(s) | 17 |
| Cac8I | GCNNGC | 4 cut(s) | 22, 82, 118, 122 |
| CaiI | CAGNNNCTG | 1 cut(s) | 461 |
| CfoI | GCGC | 2 cut(s) | 56, 282 |
| CviAII | CATG | 2 cut(s) | 160, 411 |
| CviJI | RGCY | 4 cut(s) | 38, 116, 299, 394 |
| CviKI_1 | RGCY | 4 cut(s) | 38, 116, 299, 394 |
| DpnI | GATC | 1 cut(s) | 294 |
| DpnII | GATC | 1 cut(s) | 292 |
| EaeI | YGGCCR | 1 cut(s) | 114 |
| Eam1104I | CTCTTC | 5 cut(s) | 148, 154, 212, 242, 264 |
| EarI | CTCTTC | 5 cut(s) | 148, 154, 212, 242, 264 |
| Eco130I | CCWWGG | 2 cut(s) | 39, 429 |
| Eco32I | GATATC | 1 cut(s) | 175 |
| EcoRII | CCWGG | 1 cut(s) | 230 |
| EcoRV | GATATC | 1 cut(s) | 175 |
| EcoT14I | CCWWGG | 2 cut(s) | 39, 429 |
| ErhI | CCWWGG | 2 cut(s) | 39, 429 |
| FaeI | CATG | 2 cut(s) | 163, 414 |
| FaiI | YATR | 6 cut(s) | 161, 329, 346, 348, 412, 449 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 378, 410 |
| FaqI | GGGAC | 1 cut(s) | 119 |
| FatI | CATG | 2 cut(s) | 159, 410 |
| FauNDI | CATATG | 1 cut(s) | 346 |
| Fnu4HI | GCNGC | 1 cut(s) | 102 |
| Fsp4HI | GCNGC | 1 cut(s) | 102 |
| FspBI | CTAG | 1 cut(s) | 354 |
| GlaI | GCGC | 2 cut(s) | 55, 281 |
| GluI | GCNGC | 1 cut(s) | 102 |
| GsaI | CCCAGC | 1 cut(s) | 79 |
| HaeIII | GGCC | 2 cut(s) | 38, 116 |
| HhaI | GCGC | 2 cut(s) | 56, 282 |
| Hin1II | CATG | 2 cut(s) | 163, 414 |
| Hin6I | GCGC | 2 cut(s) | 54, 280 |
| HinP1I | GCGC | 2 cut(s) | 54, 280 |
| HindIII | AAGCTT | 1 cut(s) | 297 |
| HinfI | GANTC | 2 cut(s) | 132, 464 |
| Hpy166II | GTNNAC | 1 cut(s) | 340 |
| Hpy188I | TCNGA | 1 cut(s) | 463 |
| Hpy188III | TCNNGA | 2 cut(s) | 311, 477 |
| Hpy8I | GTNNAC | 1 cut(s) | 340 |
| Hpy99I | CGWCG | 1 cut(s) | 478 |
| HpyCH4III | ACNGT | 3 cut(s) | 12, 337, 457 |
| HpyCH4V | TGCA | 1 cut(s) | 15 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 21, 81, 177 |
| Hsp92II | CATG | 2 cut(s) | 163, 414 |
| HspAI | GCGC | 2 cut(s) | 54, 280 |
| Kzo9I | GATC | 1 cut(s) | 292 |
| LpnPI | CCDG | 9 cut(s) | 61, 98, 101, 130, 140, 194, 217, 244, 363 |
| MaeI | CTAG | 1 cut(s) | 354 |
| MalI | GATC | 1 cut(s) | 294 |
| MboI | GATC | 1 cut(s) | 292 |
| MlsI | TGGCCA | 1 cut(s) | 116 |
| MluNI | TGGCCA | 1 cut(s) | 116 |
| MlyI | GAGTC | 1 cut(s) | 141 |
| MnlI | CCTC | 9 cut(s) | 19, 28, 55, 147, 157, 163, 204, 217, 269 |
| Mox20I | TGGCCA | 1 cut(s) | 116 |
| MscI | TGGCCA | 1 cut(s) | 116 |
| MslI | CAYNNNNRTG | 1 cut(s) | 475 |
| Msp20I | TGGCCA | 1 cut(s) | 116 |
| MspR9I | CCNGG | 1 cut(s) | 232 |
| Mva1269I | GAATGC | 1 cut(s) | 320 |
| MvaI | CCWGG | 1 cut(s) | 232 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 21, 81, 177 |
| NdeI | CATATG | 1 cut(s) | 346 |
| NdeII | GATC | 1 cut(s) | 292 |
| NlaIII | CATG | 2 cut(s) | 163, 414 |
| NlaIV | GGNNCC | 1 cut(s) | 229 |
| PctI | GAATGC | 1 cut(s) | 320 |
| PfeI | GAWTC | 1 cut(s) | 464 |
| PkrI | GCNGC | 1 cut(s) | 103 |
| PleI | GAGTC | 1 cut(s) | 140 |
| PpsI | GAGTC | 1 cut(s) | 140 |
| Psp6I | CCWGG | 1 cut(s) | 230 |
| PspFI | CCCAGC | 1 cut(s) | 75 |
| PspGI | CCWGG | 1 cut(s) | 230 |
| PspN4I | GGNNCC | 1 cut(s) | 229 |
| PstNI | CAGNNNCTG | 1 cut(s) | 461 |
| RseI | CAYNNNNRTG | 1 cut(s) | 475 |
| SatI | GCNGC | 1 cut(s) | 102 |
| Sau3AI | GATC | 1 cut(s) | 292 |
| SchI | GAGTC | 1 cut(s) | 141 |
| ScrFI | CCNGG | 1 cut(s) | 232 |
| SetI | ASST | 5 cut(s) | 30, 45, 66, 301, 368 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 475 |
| SsiI | CCGC | 2 cut(s) | 102, 420 |
| SspMI | CTAG | 1 cut(s) | 354 |
| StyD4I | CCNGG | 1 cut(s) | 230 |
| StyI | CCWWGG | 2 cut(s) | 39, 429 |
| TaaI | ACNGT | 3 cut(s) | 12, 337, 457 |
| TauI | GCSGC | 1 cut(s) | 104 |
| TfiI | GAWTC | 1 cut(s) | 464 |
| TscAI | CASTG | 1 cut(s) | 17 |
| TspDTI | ATGAA | 4 cut(s) | 17, 218, 260, 270 |
| TspRI | CASTG | 1 cut(s) | 17 |
| XspI | CTAG | 1 cut(s) | 354 |