MD09G1168700.v1.1

YT521-B-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0001677
Physical Location & Seq
Reverse (-)
13968476 .. 13973097
4622 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1168700.v1.1.491

Sequence Viewer

Length: 1905 bp
ATGAAGGAGCAGGTAGTTCCCCATGTCTCAAAAAATGAGAGGTCAGTTTCTCCTAATCCTTCTCCAGATGCTGCCACCATAGGTCTTCCAAGGGAGGCAGCAGGTCAATCAGGTCCTTTTGGTTCAGGTGGAGATCATACTGTTTTCCCACCTAATGTTTATGCCCCTCAGGCCCAGCCCTTCTACTATAGAGGTTATGAAAATGGAACTGGTGAGTGGGACGAATATTCTCCATACATCAACACCGAAGGATTGGAGATTAATTCTCCTGGTGTCTACAATGAGAATCCTTCTTTAGTCTTTCATTCTGGATATGGCTACAATCCACAAATGCCGTATGGGCCTTACTCCCCGGTTACAACACCAATGCCATCCGTAGGTGGAGATGCCCAGTTATATTCCCCCCAGCAATACCCATTTTCGGGACCGCCTTATTATCAGCAGCTTGGTCCTCCTAGCATGCAATATATTACCTCACCTACTACAGTTTCACAACCAGAGCTCACCACCTTAGTTAATATCGACCAACAAGGTGACAATATGCTTTTTGGACCAAGGCCTGGTTATCATCCTCCAGTGGGATCTTTTGGTAGAGGCAATTTTCCTGGAAATCCTGGTAGTCATGGTTTTCATGACTTGCAGCAAGGATTTGATGGATTTAGATCTGGAGGTCTTTTGTCAGACTGGCCAAAACCCTCAGACAGGCACAGGTCTCCCTTATCGCCATCAGTGTCTCCACAGCCAATTGGCCCACTGGGCTCATATGGGCAGAATGTTGGCATGGCTTCTCAACAACAAAGGTCTATGTATGGGTTTGGATCTGGTTCAAACTCTTATAACAGAGGCTACATGCCCAGTGGTTATAATCAGGGATCTGGCCTTGGAAGTGCATCGTTTTCTAGCTTTGGAGCTAACAATCGTGGCTTTCTATCATTAGAAAATAGCAAGCGGCATGTGAGGGGCAGCGGTCCTATATGCAGTTGCAATGCCCCCCTTGATATTCTTTGTGAGCAGAATCGGGGCCCGAGGGCCTCAAAGCCAAAGAGTCAAATCATGGCTGATAGCTCTGTGGAGAACACCAAACATAATGCTTCTACAAACAAGGTCCTTGATGAATCATTCAACAGGCCTGATTTTGTAACAGAGTACAAAGATGCTAAGTTCTTCATTATCAAGTCATACAGTGAAGATAATGTTCACAAGAGCATCAAATATGGTGTCTGGGCCAGCACACCAAACGGTAACAAAAAGTTGGATGCTGCATATCGTGAAGCTAAGGAGATGCATGATAGCTGCCCAATTTTTCTCTTCTTTTCGGTGAATGCTAGTGCTCAGTTCTGTGGGGTGGCTGAAATGATTGGACCTGTTGATTTTGACAAGAGTCTGGATTACTGGCAGCAAGACAAATGGAGTGGCCAGTTCCCTGTGAAGTGGCATATGATTAAAGATGTCCCCAATAGTCAGTTTCGTCACATCATTCTTGAAAATAATGACAACAAGCCTGTAACTAACAGCCGAGATACTCAAGAGGTGAAATTGGAGCAGGGAATTGAGATGTTGAATATCTTCAAGAATTATGAAACAGAGATGTCGATTCTAGATGACTTTGAATTTTATGAAGACCGGCAGAAAGCAATGCAAGAGCGGAAGGCCAGACAGCAAGCCAGCCTGATTGCTGTCGGTGTGGCTGGAGAAAATGAGCACAAAAATACTGTTCAAATTCCCAGTGATTACATCAAGCACATGTCCAAGAGTTTTGCTCAAGTTGTCCGCTTGGATGAGGGCAGTAAAGAAGCTAATACCCTTTCTGAAAGAGCTAGTCCTGCTTCTGACGGCTCCATTGGTGCCAGAGTAAAACTTGAAGATGCGATGCCAGCTTCCGTGCCTTCTGTTCAGACCGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
YTH

Protein Analysis

635

Amino Acids

69.77

Weight (kDa)

5.8

Isoelectric Point (pI)

49.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
YTH PF04146 386 - 524 1.6e-50 YT521-B-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 837, 864
Acc36I ACCTGC 1 cut(s) 92
AccB1I GGYRCC 1 cut(s) 1844
AccB7I CCANNNNNTGG 1 cut(s) 560
AccBSI CCGCTC 1 cut(s) 1645
AccI GTMKAC 1 cut(s) 276
AciI CCGC 5 cut(s) 428, 949, 966, 1645, 1771
AclWI GGATC 3 cut(s) 589, 826, 880
AcoI YGGCCR 2 cut(s) 686, 1414
AcsI RAATTY 2 cut(s) 1610, 1719
AfaI GTAC 1 cut(s) 1148
AfiI CCNNNNNNNGG 6 cut(s) 377, 421, 422, 560, 578, 702
AflIII ACRYGT 1 cut(s) 1743
AgeI ACCGGT 1 cut(s) 1898
AgsI TTSAA 8 cut(s) 828, 1123, 1484, 1561, 1570, 1610, 1718, 1862
AjnI CCWGG 4 cut(s) 268, 559, 604, 613
Alw21I GWGCWC 3 cut(s) 504, 1333, 1704
Alw26I GTCTC 3 cut(s) 31, 717, 738
AlwI GGATC 3 cut(s) 589, 826, 880
AlwNI CAGNNNCTG 1 cut(s) 71
Ama87I CYCGRG 1 cut(s) 1024
ApaI GGGCCC 1 cut(s) 1025
ApeKI GCWGC 8 cut(s) 71, 98, 442, 640, 963, 1259, 1293, 1396
ApoI RAATTY 2 cut(s) 1610, 1719
ArsI GACNNNNNNTTYG 2 cut(s) 1203, 1235
AseI ATTAAT 1 cut(s) 261
AsiGI ACCGGT 1 cut(s) 1898
Asp700I GAANNNNTTC 1 cut(s) 1565
AsuC2I CCSGG 1 cut(s) 353
AsuHPI GGTGA 6 cut(s) 224, 468, 496, 545, 1330, 1543
AvaI CYCGRG 1 cut(s) 1024
AvaII GGWCC 7 cut(s) 113, 425, 449, 551, 968, 1105, 1361
AxyI CCTNAGG 1 cut(s) 168
BaeGI GKGCMC 1 cut(s) 1025
BalI TGGCCA 2 cut(s) 688, 1416
BanI GGYRCC 1 cut(s) 1844
BanII GRGCYC 3 cut(s) 504, 761, 1025
BbsI GAAGAC 2 cut(s) 77, 1626
Bbv12I GWGCWC 3 cut(s) 504, 1333, 1704
BbvI GCAGC 8 cut(s) 58, 110, 454, 652, 975, 1246, 1280, 1408
BccI CCATC 3 cut(s) 379, 647, 733
BceAI ACGGC 2 cut(s) 319, 1849
BciT130I CCWGG 4 cut(s) 270, 561, 606, 615
BcnI CCSGG 1 cut(s) 353
BcoDI GTCTC 3 cut(s) 31, 717, 738
BfaI CTAG 5 cut(s) 456, 900, 1326, 1598, 1818
BfmI CTRYAG 2 cut(s) 187, 483
BfuAI ACCTGC 1 cut(s) 92
BglI GCCNNNNNGGC 3 cut(s) 170, 340, 756
BglII AGATCT 1 cut(s) 662
BisI GCNGC 9 cut(s) 72, 99, 443, 641, 950, 964, 1260, 1294, 1397
BlsI GCNGC 9 cut(s) 73, 100, 444, 642, 951, 965, 1261, 1295, 1398
Bme1390I CCNGG 5 cut(s) 270, 353, 561, 606, 615
Bme18I GGWCC 7 cut(s) 113, 425, 449, 551, 968, 1105, 1361
BmeT110I CYCGRG 1 cut(s) 1024
BmiI GGNNCC 5 cut(s) 426, 1022, 1023, 1837, 1846
BmrFI CCNGG 5 cut(s) 270, 353, 561, 606, 615
BmrI ACTGGG 4 cut(s) 385, 764, 849, 1719
BmsI GCATC 9 cut(s) 58, 376, 899, 1144, 1215, 1246, 1272, 1855, 1860
BmuI ACTGGG 4 cut(s) 385, 764, 849, 1719
BoxI GACNNNNGTC 1 cut(s) 1380
BpiI GAAGAC 2 cut(s) 77, 1626
BplI GAGNNNNNCTC 2 cut(s) 1744, 1776
BpmI CTGGAG 4 cut(s) 48, 558, 687, 1710
Bpu10I CCTNAGC 1 cut(s) 1275
BpuEI CTTGAG 2 cut(s) 1509, 1746
BpuMI CCSGG 1 cut(s) 353
BsaBI GATNNNNATC 1 cut(s) 661
BsaI GGTCTC 1 cut(s) 717
BsaJI CCNNGG 5 cut(s) 89, 351, 554, 880, 1025
BsaWI WCCGGW 1 cut(s) 1898
Bsc4I CCNNNNNNNGG 6 cut(s) 377, 421, 422, 560, 578, 702
Bse118I RCCGGY 2 cut(s) 1623, 1898
Bse1I ACTGG 9 cut(s) 214, 391, 575, 689, 759, 855, 1397, 1417, 1725
Bse21I CCTNAGG 1 cut(s) 168
Bse3DI GCAATG 2 cut(s) 991, 1641
Bse8I GATNNNNATC 1 cut(s) 661
BseBI CCWGG 4 cut(s) 270, 561, 606, 615
BseDI CCNNGG 5 cut(s) 89, 351, 554, 880, 1025
BseGI GGATG 4 cut(s) 371, 568, 1261, 1783
BseJI GATNNNNATC 1 cut(s) 661
BseLI CCNNNNNNNGG 6 cut(s) 377, 421, 422, 560, 578, 702
BseMI GCAATG 2 cut(s) 991, 1641
BseMII CTCAG 3 cut(s) 182, 711, 1346
BseNI ACTGG 9 cut(s) 214, 391, 575, 689, 759, 855, 1397, 1417, 1725
BseSI GKGCMC 1 cut(s) 1025
BseXI GCAGC 8 cut(s) 58, 110, 454, 652, 975, 1246, 1280, 1408
BseYI CCCAGC 2 cut(s) 174, 405
BshNI GGYRCC 1 cut(s) 1844
BshTI ACCGGT 1 cut(s) 1898
BsiHKAI GWGCWC 3 cut(s) 504, 1333, 1704
BsiHKCI CYCGRG 1 cut(s) 1024
BsiSI CCGG 3 cut(s) 353, 1624, 1899
BslFI GGGAC 3 cut(s) 233, 438, 1436
BslI CCNNNNNNNGG 6 cut(s) 377, 421, 422, 560, 578, 702
BsmAI GTCTC 3 cut(s) 31, 717, 738
BsmFI GGGAC 3 cut(s) 233, 438, 1436
BsmI GAATGC 1 cut(s) 1327
Bso31I GGTCTC 1 cut(s) 717
BsoBI CYCGRG 1 cut(s) 1024
Bsp120I GGGCCC 1 cut(s) 1021
Bsp1286I GDGCHC 5 cut(s) 504, 761, 1025, 1333, 1704
Bsp143I GATC 5 cut(s) 133, 581, 662, 818, 872
BspACI CCGC 5 cut(s) 428, 949, 966, 1645, 1771
BspCNI CTCAG 3 cut(s) 181, 710, 1345
BspHI TCATGA 1 cut(s) 631
BspLI GGNNCC 5 cut(s) 426, 1022, 1023, 1837, 1846
BspMI ACCTGC 1 cut(s) 92
BspPI GGATC 3 cut(s) 589, 826, 880
BspT107I GGYRCC 1 cut(s) 1844
BspTNI GGTCTC 1 cut(s) 717
BsrBI CCGCTC 1 cut(s) 1645
BsrDI GCAATG 2 cut(s) 991, 1641
BsrFI RCCGGY 2 cut(s) 1623, 1898
BsrI ACTGG 9 cut(s) 214, 391, 575, 689, 759, 855, 1397, 1417, 1725
BssAI RCCGGY 2 cut(s) 1623, 1898
BssECI CCNNGG 5 cut(s) 89, 351, 554, 880, 1025
BssMI GATC 5 cut(s) 133, 581, 662, 818, 872
BssT1I CCWWGG 3 cut(s) 89, 554, 880
Bst2UI CCWGG 4 cut(s) 270, 561, 606, 615
Bst4CI ACNGT 5 cut(s) 142, 487, 1184, 1241, 1714
Bst6I CTCTTC 1 cut(s) 1313
BstC8I GCNNGC 6 cut(s) 461, 947, 1228, 1662, 1666, 1875
BstDEI CTNAG 6 cut(s) 168, 511, 697, 1158, 1275, 1332
BstENI CCTNNNNNAGG 1 cut(s) 700
BstF5I GGATG 4 cut(s) 371, 568, 1261, 1783
BstKTI GATC 5 cut(s) 136, 584, 665, 821, 875
BstMAI GTCTC 3 cut(s) 31, 717, 738
BstMBI GATC 5 cut(s) 133, 581, 662, 818, 872
BstMWI GCNNNNNNNGC 5 cut(s) 170, 340, 756, 1823, 1874
BstNI CCWGG 4 cut(s) 270, 561, 606, 615
BstNSI RCATGY 4 cut(s) 463, 853, 956, 1747
BstPAI GACNNNNGTC 1 cut(s) 1380
BstSCI CCNGG 5 cut(s) 268, 351, 559, 604, 613
BstSFI CTRYAG 2 cut(s) 187, 483
BstSLI GKGCMC 1 cut(s) 1025
BstV1I GCAGC 8 cut(s) 58, 110, 454, 652, 975, 1246, 1280, 1408
BstV2I GAAGAC 2 cut(s) 77, 1626
BstX2I RGATCY 4 cut(s) 581, 662, 818, 872
BstYI RGATCY 4 cut(s) 581, 662, 818, 872
Bsu36I CCTNAGG 1 cut(s) 168
BtgZI GCGATG 1 cut(s) 1883
BtsCI GGATG 4 cut(s) 371, 568, 1261, 1783
BtsIMutI CAGTG 6 cut(s) 582, 735, 752, 862, 1189, 1732
BveI ACCTGC 1 cut(s) 92
Cac8I GCNNGC 6 cut(s) 461, 947, 1228, 1662, 1666, 1875
CaiI CAGNNNCTG 1 cut(s) 71
CciI TCATGA 1 cut(s) 631
Cfr10I RCCGGY 2 cut(s) 1623, 1898
Csp6I GTAC 1 cut(s) 1147
CspAI ACCGGT 1 cut(s) 1898
CspCI CAANNNNNGTGG 2 cut(s) 1393, 1428
CviQI GTAC 1 cut(s) 1147
DdeI CTNAG 6 cut(s) 168, 511, 697, 1158, 1275, 1332
DpnI GATC 5 cut(s) 135, 583, 664, 820, 874
DpnII GATC 5 cut(s) 133, 581, 662, 818, 872
EaeI YGGCCR 2 cut(s) 686, 1414
Eam1104I CTCTTC 1 cut(s) 1313
EarI CTCTTC 1 cut(s) 1313
Ecl136II GAGCTC 1 cut(s) 502
Eco130I CCWWGG 3 cut(s) 89, 554, 880
Eco147I AGGCCT 2 cut(s) 559, 1129
Eco24I GRGCYC 3 cut(s) 504, 761, 1025
Eco31I GGTCTC 1 cut(s) 717
Eco47I GGWCC 7 cut(s) 113, 425, 449, 551, 968, 1105, 1361
Eco53kI GAGCTC 1 cut(s) 502
Eco81I CCTNAGG 1 cut(s) 168
Eco88I CYCGRG 1 cut(s) 1024
EcoICRI GAGCTC 1 cut(s) 502
EcoNI CCTNNNNNAGG 1 cut(s) 700
EcoO109I RGGNCCY 4 cut(s) 113, 1021, 1029, 1105
EcoRII CCWGG 4 cut(s) 268, 559, 604, 613
EcoT14I CCWWGG 3 cut(s) 89, 554, 880
EcoT22I ATGCAT 1 cut(s) 1287
EcoT38I GRGCYC 3 cut(s) 504, 761, 1025
ErhI CCWWGG 3 cut(s) 89, 554, 880
FaqI GGGAC 3 cut(s) 233, 438, 1436
FauNDI CATATG 2 cut(s) 763, 1437
FblI GTMKAC 1 cut(s) 276
Fnu4HI GCNGC 9 cut(s) 72, 99, 443, 641, 950, 964, 1260, 1294, 1397
FokI GGATG 4 cut(s) 358, 555, 1268, 1790
FriOI GRGCYC 3 cut(s) 504, 761, 1025
Fsp4HI GCNGC 9 cut(s) 72, 99, 443, 641, 950, 964, 1260, 1294, 1397
FspBI CTAG 5 cut(s) 456, 900, 1326, 1598, 1818
GluI GCNGC 9 cut(s) 72, 99, 443, 641, 950, 964, 1260, 1294, 1397
GsaI CCCAGC 2 cut(s) 178, 409
GsuI CTGGAG 4 cut(s) 48, 558, 687, 1710
HapII CCGG 3 cut(s) 353, 1624, 1899
HinfI GANTC 6 cut(s) 286, 1015, 1045, 1115, 1381, 1594
HpaII CCGG 3 cut(s) 353, 1624, 1899
HphI GGTGA 6 cut(s) 224, 468, 496, 545, 1330, 1543
Hpy166II GTNNAC 2 cut(s) 277, 1198
Hpy188I TCNGA 5 cut(s) 682, 700, 1810, 1831, 1896
Hpy8I GTNNAC 2 cut(s) 277, 1198
HpyAV CCTTC 6 cut(s) 69, 190, 242, 300, 1642, 1896
HpyCH4III ACNGT 5 cut(s) 142, 487, 1184, 1241, 1714
HpyCH4V TGCA 8 cut(s) 463, 640, 890, 978, 984, 1262, 1285, 1639
HpyF10VI GCNNNNNNNGC 5 cut(s) 170, 340, 756, 1823, 1874
HpyF3I CTNAG 6 cut(s) 168, 511, 697, 1158, 1275, 1332
Kzo9I GATC 5 cut(s) 133, 581, 662, 818, 872
LmnI GCTCC 4 cut(s) 7, 908, 1540, 1841
Lsp1109I GCAGC 8 cut(s) 58, 110, 454, 652, 975, 1246, 1280, 1408
LweI GCATC 9 cut(s) 58, 376, 899, 1144, 1215, 1246, 1272, 1855, 1860
MaeI CTAG 5 cut(s) 456, 900, 1326, 1598, 1818
MaeIII GTNAC 6 cut(s) 355, 533, 1138, 1241, 1469, 1504
MalI GATC 5 cut(s) 135, 583, 664, 820, 874
MbiI CCGCTC 1 cut(s) 1645
MboI GATC 5 cut(s) 133, 581, 662, 818, 872
MboII GAAGA 7 cut(s) 77, 1156, 1199, 1300, 1558, 1631, 1874
MfeI CAATTG 1 cut(s) 744
MflI RGATCY 4 cut(s) 581, 662, 818, 872
MhlI GDGCHC 5 cut(s) 504, 761, 1025, 1333, 1704
MlsI TGGCCA 2 cut(s) 688, 1416
MluCI AATT 9 cut(s) 262, 598, 744, 1299, 1535, 1548, 1573, 1610, 1719
MluNI TGGCCA 2 cut(s) 688, 1416
MlyI GAGTC 2 cut(s) 1054, 1390
MmeI TCCRAC 1 cut(s) 1233
Mox20I TGGCCA 2 cut(s) 688, 1416
Mph1103I ATGCAT 1 cut(s) 1287
MroXI GAANNNNTTC 1 cut(s) 1565
MscI TGGCCA 2 cut(s) 688, 1416
MseI TTAA 3 cut(s) 261, 516, 1443
Msp20I TGGCCA 2 cut(s) 688, 1416
MspA1I CMGCKG 1 cut(s) 966
MspI CCGG 3 cut(s) 353, 1624, 1899
MspR9I CCNGG 5 cut(s) 270, 353, 561, 606, 615
MunI CAATTG 1 cut(s) 744
Mva1269I GAATGC 1 cut(s) 1327
MvaI CCWGG 4 cut(s) 270, 561, 606, 615
MwoI GCNNNNNNNGC 5 cut(s) 170, 340, 756, 1823, 1874
NciI CCSGG 1 cut(s) 353
NdeI CATATG 2 cut(s) 763, 1437
NdeII GATC 5 cut(s) 133, 581, 662, 818, 872
NlaIV GGNNCC 5 cut(s) 426, 1022, 1023, 1837, 1846
NmeAIII GCCGAG 1 cut(s) 1541
NmuCI GTSAC 2 cut(s) 533, 1469
NsiI ATGCAT 1 cut(s) 1287
NspI RCATGY 4 cut(s) 463, 853, 956, 1747
PaeI GCATGC 1 cut(s) 463
PagI TCATGA 1 cut(s) 631
PceI AGGCCT 2 cut(s) 559, 1129
PciI ACATGT 1 cut(s) 1743
PctI GAATGC 1 cut(s) 1327
PdmI GAANNNNTTC 1 cut(s) 1565
PfeI GAWTC 4 cut(s) 286, 1015, 1115, 1594
PflMI CCANNNNNTGG 1 cut(s) 560
PfoI TCCNGGA 1 cut(s) 604
PinAI ACCGGT 1 cut(s) 1898
PkrI GCNGC 9 cut(s) 73, 100, 444, 642, 951, 965, 1261, 1295, 1398
PleI GAGTC 2 cut(s) 1053, 1389
PpsI GAGTC 2 cut(s) 1053, 1389
PpuMI RGGWCCY 2 cut(s) 113, 1105
PscI ACATGT 1 cut(s) 1743
PshAI GACNNNNGTC 1 cut(s) 1380
PshBI ATTAAT 1 cut(s) 261
PsiI TTATAA 2 cut(s) 837, 864
Psp124BI GAGCTC 1 cut(s) 504
Psp5II RGGWCCY 2 cut(s) 113, 1105
Psp6I CCWGG 4 cut(s) 268, 559, 604, 613
PspFI CCCAGC 2 cut(s) 174, 405
PspGI CCWGG 4 cut(s) 268, 559, 604, 613
PspN4I GGNNCC 5 cut(s) 426, 1022, 1023, 1837, 1846
PspOMI GGGCCC 1 cut(s) 1021
PspPPI RGGWCCY 2 cut(s) 113, 1105
PstNI CAGNNNCTG 1 cut(s) 71
PsuI RGATCY 4 cut(s) 581, 662, 818, 872
RsaI GTAC 1 cut(s) 1148
RsaNI GTAC 1 cut(s) 1147
SacI GAGCTC 1 cut(s) 504
SaqAI TTAA 3 cut(s) 261, 516, 1443
SatI GCNGC 9 cut(s) 72, 99, 443, 641, 950, 964, 1260, 1294, 1397
Sau3AI GATC 5 cut(s) 133, 581, 662, 818, 872
SchI GAGTC 2 cut(s) 1054, 1390
ScrFI CCNGG 5 cut(s) 270, 353, 561, 606, 615
SduI GDGCHC 5 cut(s) 504, 761, 1025, 1333, 1704
SfaNI GCATC 9 cut(s) 58, 376, 899, 1144, 1215, 1246, 1272, 1855, 1860
SfcI CTRYAG 2 cut(s) 187, 483
SinI GGWCC 7 cut(s) 113, 425, 449, 551, 968, 1105, 1361
SmlI CTYRAG 2 cut(s) 1524, 1761
SmoI CTYRAG 2 cut(s) 1524, 1761
SphI GCATGC 1 cut(s) 463
Sse9I AATT 9 cut(s) 262, 598, 744, 1299, 1535, 1548, 1573, 1610, 1719
SseBI AGGCCT 2 cut(s) 559, 1129
SsiI CCGC 5 cut(s) 428, 949, 966, 1645, 1771
SspI AATATT 1 cut(s) 227
SspMI CTAG 5 cut(s) 456, 900, 1326, 1598, 1818
SstI GAGCTC 1 cut(s) 504
StuI AGGCCT 2 cut(s) 559, 1129
StyD4I CCNGG 5 cut(s) 268, 351, 559, 604, 613
StyI CCWWGG 3 cut(s) 89, 554, 880
TaaI ACNGT 5 cut(s) 142, 487, 1184, 1241, 1714
TaqI TCGA 2 cut(s) 522, 1592
TasI AATT 9 cut(s) 262, 598, 744, 1299, 1535, 1548, 1573, 1610, 1719
TatI WGTACW 1 cut(s) 1146
TauI GCSGC 1 cut(s) 952
TfiI GAWTC 4 cut(s) 286, 1015, 1115, 1594
Tru1I TTAA 3 cut(s) 261, 516, 1443
Tru9I TTAA 3 cut(s) 261, 516, 1443
TscAI CASTG 6 cut(s) 582, 735, 759, 862, 1189, 1732
TseFI GTSAC 2 cut(s) 533, 1469
TseI GCWGC 8 cut(s) 71, 98, 442, 640, 963, 1259, 1293, 1396
Tsp45I GTSAC 2 cut(s) 533, 1469
TspDTI ATGAA 8 cut(s) 17, 213, 293, 620, 1128, 1156, 1593, 1632
TspGWI ACGGA 2 cut(s) 364, 1870
TspRI CASTG 6 cut(s) 582, 735, 759, 862, 1189, 1732
Van91I CCANNNNNTGG 1 cut(s) 560
VpaK11BI GGWCC 7 cut(s) 113, 425, 449, 551, 968, 1105, 1361
VspI ATTAAT 1 cut(s) 261
XagI CCTNNNNNAGG 1 cut(s) 700
XapI RAATTY 2 cut(s) 1610, 1719
XbaI TCTAGA 1 cut(s) 1597
XceI RCATGY 4 cut(s) 463, 853, 956, 1747
XmiI GTMKAC 1 cut(s) 276
XmnI GAANNNNTTC 1 cut(s) 1565
XspI CTAG 5 cut(s) 456, 900, 1326, 1598, 1818
Zsp2I ATGCAT 1 cut(s) 1287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.