Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000048.1

Orthogroup ID

OG0001677

Physical Location & Seq

Genomic Coordinates Forward (+)

85290 .. 95526

Gene Structure 10237 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000048.1_g000023.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3297 bp

atgggtgatggaaccctggaatacactgttgatgacgctcttgtctccatggggtttggaaagttccaactccttgtgcttgcttatgctggcatgggttggatctcagaagcaatggagatgatgctactctcgtttgtaggaccagcagttcagtctgcttggggtctttcttctaaacaagaaagtttcataaccagtgtggtgtttactggaatgctggttggagcatactcatggggcatcatctcagataactacggacgcaggaaaggattccttattacagccatgattacttctggtgctggttttctgagtgctttttcccctaattatacatccttgcttattttccgttgtttggtcggtgttggcttgggaggtggtccggtactgtcatcctggtttctggagttcattcctgctcctagcagaggcacctggatggttatcttttcagctttttggactgttggaacaattcttgaggcttcacttgcatggtttgtcatgccaacactgggttggaggtggctacttgcactctctgcactcccttcttcacttcttcttatattctattgggtagcacctgaatcaccaaggtatttatgcttaaaaggtagaacagctgaggcaatcactattttggagaaagtagcaagactgaatggaacaaaactcccttctggaattcttgtttcagatttaacagtagagttatctgaaaagagtactccttcggaagatacaagtttgatctcaccaaagacagatgaagatgcgactcccaaggggacggattctaatatggggggtatctctttactgttaacgctcctctccccaaatttaatcaggtctaccttgcttttatgggtagtattctttgggaatgccttttcatattatggcctggtgctcctgacgtctgagttgaacggacatagccaatgtgggccaactaaagtacagtcagtcgcgtctcaggatatcaactacaaaaatattttcatcgctagttttgcagagttacctgggctcatcatatctgctgccacggtggatagactgggtcgtaagctttcgatgtcagggatgttcttcctgtgctgcatttttctgctaccattggtagtccatcagcctgagggcttgactactgcccttctgtttggagctcgtatatgcatcacggcaaccttcaccatagtctatatatatgctcccgagatatacccaacgtcagtacgaacaactggtgttggagttgcaagcgcaatgggaagaatcggtggaatggtatgtcctcttgtggctgtagctttggtacatggattcatggcggcaaaccaaccgcagggtccagatcgtacatctgaagagaaacctgctgaacctgatagcatgaaggagcagactcttgtagcaaaaaatgagaggtcaatttctcctaatccttctcaggatggtggctcaataggtcatccaagggaagcagcagctcaaccgggttcttttggcgtaggtggagatcacaccgttttccctcctaatgtgtattcccctcaggcgcagcagaccttctactatagaggttatgaaaatggaactggtgagtgggacgagtatcctccatacctgaattctgaaggattggagattacgtctcctggtgtctacaatgagaatcatccatctcttgtctatcattctggttatagctacaatccgcaaatgccatatgggccctactctccggtcacaacacctatgccttctggagggggagatggacagttatattccccccagcaatttccattttcagggccaccttattatcagcagctaggacctcctagcatgccatacattacttcaccgactccagtttcacagccagacctcaccaccctagttagtattgatcaacaaggtgacagcatgctttttgggccaaggcctggttattctcctgtgggatcttatggtaggggcagttttcctggaaatccaggtagttttggttatcatgatatgcagcaaggatttgatgggttgagatctggaggactctggtcagactggtcaaaaccctcggacaggcagaggtcctatactcccttgtcgccagcagtatctccacagccaattggcccacttggctcatttgggcagaatgttggaatgggttctcaacaccaaaggtctttgtatggatatggatctggttcaaactcttataacagaggctacattcccagtggttttaatcagggctccagccttggaagtgcatccttttccagttttggagctaacaacagaggctttctatcattagaaaatagcaagaggcatgtgagaggcaccggtccaatatgcagttgcaatgctccccttgatattctttgtgagcagaaccgaggaccaagggcgtcaaagccaaaggcacaactcattgctgatagcgctgtggagaacactaaacttaatacacctacaaccaaggttcatgacgaaacatacaaccggccagattttgtgacagagtacaaagatgctaagttctttatcatcaaatcttacagtgaagataatgttcacaagagtatcaaatacggtgtctgggcaagcacaccaaatggcaacagaaagttagatgctgcatatcatgaagctacggagaagcatgatagctgcccaatttttctcttgttttcggtgaatgctagtgctcagttctgtggggtggctgaaatggttggacctgttgattttgacaagagtgtggattactggcagcaagacaaatggagcgggcagttccctgtcaagtggcatgttattaaggatgtcccaaatagtcagtttcgtcatattgttcttgaaaataatgataacaagccagtaacaaacagtcgagatactcaagaggtaaaactagagcagggaattgagatgttaattattttcaagaattatgaaacggatatgtcgattctagatgattttgatttttatgaagatcgtcagaaggcaatgcaagagcggaaggccagacagcaagccagtctgattgctgtaggtgtagtcggagaaaatgagcacagaagtcctgttcaaattcccactgatttcatcaagcacatgtcgaagagttttgctcaagtggtccgcttggatgagggtactaaagaagctactgctgcttctgatggccccattggcactagggtgaaacttgaagatgcaattccggtgtccgtctcttctgctcagatcagttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

YTH

Protein Analysis

1098

Amino Acids

119.53

Weight (kDa)

5.62

Isoelectric Point (pI)

39.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001677)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13060 AT3G13060 AT3G13060 AT3G13060 AT3G13060 AT3G13060
fragaria_vesca	FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470 FvH4_6g36470
malus_domestica	MD09G1168700.v1.1 MD17G1158000.v1.1
prunus_persica	Prupe.3G027100_v2.0.a1 Prupe.3G027100_v2.0.a1 Prupe.3G027100_v2.0.a1 Prupe.3G027100_v2.0.a1 Prupe.3G027100_v2.0.a1 Prupe.3G027100_v2.0.a1 Prupe.3G027100_v2.0.a1 Prupe.3G027100_v2.0.a1
pyrus_communis	pycom09g08640 pycom17g15140
rosa_chinensis	RchiOBHm_Chr2g0148601
rosa_laevigata	RLG00000020354
rosa_multiflora	Rmu_sc0000048.1_g000023
rosa_roxburghii	Rroxscaffold_2G00098600
rosa_rugosa	Rorug02G0407700 Rorug02G0407700 Rorug02G0407800 Rorug02G0407900 Rorug02G0407900 Rorug02G0408000
rosa_samantha	Rh2AG466400 Rh2BG479500 Rh2CG452900 Rh2DG488300
rosa_wichuraiana	Rw2G038030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2250
AasI	GACNNNNNNGTC	1 cut(s)	41
AatII	GACGTC	1 cut(s)	935
Acc36I	ACCTGC	1 cut(s)	1402
AccB1I	GGYRCC	2 cut(s)	440, 2375
AccB7I	CCANNNNNTGG	1 cut(s)	1970
AccBSI	CCGCTC	2 cut(s)	2826, 3058
AccI	GTMKAC	2 cut(s)	866, 1683
AccII	CGCG	1 cut(s)	986
AciI	CCGC	6 cut(s)	1349, 1361, 1736, 2826, 3058, 3184
AclWI	GGATC	3 cut(s)	110, 1996, 2239
AcoI	YGGCCR	1 cut(s)	2540
AcsI	RAATTY	4 cut(s)	696, 853, 1648, 3132
AcuI	CTGAAG	2 cut(s)	1404, 1674
AcyI	GRCGYC	2 cut(s)	932, 2444
AfaI	GTAC	8 cut(s)	396, 739, 975, 1254, 1335, 1378, 2561, 3199
AfeI	AGCGCT	1 cut(s)	2479
AfiI	CCNNNNNNNGG	8 cut(s)	364, 437, 524, 1363, 1787, 1832, 1970, 2109
AflIII	ACRYGT	1 cut(s)	3156
AgeI	ACCGGT	1 cut(s)	2378
AgsI	TTSAA	6 cut(s)	943, 2241, 2897, 2983, 3131, 3254
AjnI	CCWGG	9 cut(s)	15, 404, 443, 918, 1039, 1675, 1969, 2011, 2020
AleI	CACNNNNGTG	1 cut(s)	3242
AloI	GAACNNNNNNTCC	2 cut(s)	135, 167
Alw21I	GWGCWC	4 cut(s)	927, 1186, 2746, 3117
Alw26I	GTCTC	4 cut(s)	49, 993, 1677, 3280
AlwI	GGATC	3 cut(s)	110, 1996, 2239
Ama87I	CYCGRG	1 cut(s)	1232
Aor51HI	AGCGCT	1 cut(s)	2479
ApaI	GGGCCC	1 cut(s)	1755
ApoI	RAATTY	4 cut(s)	696, 853, 1648, 3132
ArsI	GACNNNNNNTTYG	2 cut(s)	2616, 2648
AsiGI	ACCGGT	1 cut(s)	2378
Asp700I	GAANNNNTTC	2 cut(s)	275, 2197
AspLEI	GCGC	3 cut(s)	1283, 1579, 2480
AsuC2I	CCSGG	1 cut(s)	1515
AvaI	CYCGRG	1 cut(s)	1232
AvaII	GGWCC	9 cut(s)	143, 389, 1367, 1859, 2118, 2381, 2435, 2774, 3181
AxyI	CCTNAGG	2 cut(s)	1152, 1572
BaeGI	GKGCMC	1 cut(s)	1755
BaeI	ACNNNNGTAYC	2 cut(s)	2602, 2635
BanI	GGYRCC	2 cut(s)	440, 2375
BanII	GRGCYC	4 cut(s)	1047, 1186, 1755, 2288
Bbv12I	GWGCWC	4 cut(s)	927, 1186, 2746, 3117
BbvCI	CCTCAGC	1 cut(s)	636
BccI	CCATC	8 cut(s)	2, 442, 1152, 1466, 1708, 1790, 2054, 3218
BceAI	ACGGC	1 cut(s)	1215
BciT130I	CCWGG	9 cut(s)	17, 406, 445, 920, 1041, 1677, 1971, 2013, 2022
BciVI	GTATCC	1 cut(s)	1644
BclI	TGATCA	1 cut(s)	1933
BcnI	CCSGG	1 cut(s)	1515
BcoDI	GTCTC	4 cut(s)	49, 993, 1677, 3280
BfaI	CTAG	9 cut(s)	432, 1023, 1856, 1866, 1922, 2739, 2951, 3011, 3240
BfmI	CTRYAG	3 cut(s)	1323, 1594, 3090
BfoI	RGCGCY	1 cut(s)	2481
BfuAI	ACCTGC	1 cut(s)	1402
BfuI	GTATCC	1 cut(s)	1644
BglI	GCCNNNNNGGC	3 cut(s)	1750, 2169, 3234
BglII	AGATCT	1 cut(s)	2069
BmcAI	AGTACT	1 cut(s)	739
Bme18I	GGWCC	9 cut(s)	143, 389, 1367, 1859, 2118, 2381, 2435, 2774, 3181
BmeT110I	CYCGRG	1 cut(s)	1232
BmiI	GGNNCC	7 cut(s)	13, 442, 1368, 1753, 2287, 2377, 3229
BmrI	ACTGGG	3 cut(s)	533, 1085, 2262
BmsI	GCATC	8 cut(s)	114, 252, 775, 1203, 2312, 2557, 2659, 3247
BmuI	ACTGGG	3 cut(s)	533, 1085, 2262
BoxI	GACNNNNGTC	1 cut(s)	2083
BplI	GAGNNNNNCTC	2 cut(s)	3157, 3189
BpmI	CTGGAG	5 cut(s)	434, 1806, 1878, 2094, 2272
Bpu10I	CCTNAGC	1 cut(s)	636
BpuEI	CTTGAG	3 cut(s)	509, 2922, 3159
BpuMI	CCSGG	1 cut(s)	1515
BsaBI	GATNNNNATC	2 cut(s)	452, 2230
BsaHI	GRCGYC	2 cut(s)	932, 2444
BsaWI	WCCGGW	4 cut(s)	391, 1762, 2378, 3265
BsaXI	ACNNNNNCTCC	2 cut(s)	1655, 1685
Bsc4I	CCNNNNNNNGG	8 cut(s)	364, 437, 524, 1363, 1787, 1832, 1970, 2109
Bse118I	RCCGGY	2 cut(s)	2378, 2538
Bse21I	CCTNAGG	2 cut(s)	1152, 1572
Bse3DI	GCAATG	5 cut(s)	120, 1290, 2404, 2466, 3054
Bse8I	GATNNNNATC	2 cut(s)	452, 2230
BseBI	CCWGG	9 cut(s)	17, 406, 445, 920, 1041, 1677, 1971, 2013, 2022
BseJI	GATNNNNATC	2 cut(s)	452, 2230
BseLI	CCNNNNNNNGG	8 cut(s)	364, 437, 524, 1363, 1787, 1832, 1970, 2109
BseMI	GCAATG	5 cut(s)	120, 1290, 2404, 2466, 3054
BseRI	GAGGAG	1 cut(s)	833
BseSI	GKGCMC	1 cut(s)	1755
BseYI	CCCAGC	1 cut(s)	1815
BsgI	GTGCAG	1 cut(s)	537
Bsh1236I	CGCG	1 cut(s)	986
BshNI	GGYRCC	2 cut(s)	440, 2375
BshTI	ACCGGT	1 cut(s)	2378
BsiHKAI	GWGCWC	4 cut(s)	927, 1186, 2746, 3117
BsiHKCI	CYCGRG	1 cut(s)	1232
BsiSI	CCGG	6 cut(s)	392, 1514, 1763, 2379, 2539, 3266
BslFI	GGGAC	3 cut(s)	814, 1640, 2849
BslI	CCNNNNNNNGG	8 cut(s)	364, 437, 524, 1363, 1787, 1832, 1970, 2109
BsmAI	GTCTC	4 cut(s)	49, 993, 1677, 3280
BsmBI	CGTCTC	3 cut(s)	993, 1677, 3280
BsmFI	GGGAC	3 cut(s)	814, 1640, 2849
BsmI	GAATGC	3 cut(s)	222, 904, 2740
BsoBI	CYCGRG	1 cut(s)	1232
Bsp120I	GGGCCC	1 cut(s)	1751
Bsp1286I	GDGCHC	7 cut(s)	927, 1047, 1186, 1755, 2288, 2746, 3117
Bsp19I	CCATGG	1 cut(s)	48
BspACI	CCGC	6 cut(s)	1349, 1361, 1736, 2826, 3058, 3184
BspFNI	CGCG	1 cut(s)	986
BspHI	TCATGA	3 cut(s)	2038, 2521, 2680
BspLI	GGNNCC	7 cut(s)	13, 442, 1368, 1753, 2287, 2377, 3229
BspMI	ACCTGC	1 cut(s)	1402
BspPI	GGATC	3 cut(s)	110, 1996, 2239
BspT107I	GGYRCC	2 cut(s)	440, 2375
BsrBI	CCGCTC	2 cut(s)	2826, 3058
BsrDI	GCAATG	5 cut(s)	120, 1290, 2404, 2466, 3054
BsrFI	RCCGGY	2 cut(s)	2378, 2538
BssAI	RCCGGY	2 cut(s)	2378, 2538
BssNI	GRCGYC	2 cut(s)	932, 2444
BssT1I	CCWWGG	8 cut(s)	48, 605, 795, 1493, 1964, 2293, 2438, 2514
Bst2UI	CCWGG	9 cut(s)	17, 406, 445, 920, 1041, 1677, 1971, 2013, 2022
Bst6I	CTCTTC	3 cut(s)	1380, 3158, 3283
BstACI	GRCGYC	2 cut(s)	932, 2444
BstAPI	GCANNNNNTGC	1 cut(s)	551
BstC8I	GCNNGC	9 cut(s)	81, 91, 1279, 1871, 1952, 2139, 2641, 2828, 3075
BstDSI	CCRYGG	2 cut(s)	48, 1062
BstENI	CCTNNNNNAGG	3 cut(s)	435, 1785, 2107
BstFNI	CGCG	1 cut(s)	986
BstH2I	RGCGCY	1 cut(s)	2481
BstHHI	GCGC	3 cut(s)	1283, 1579, 2480
BstMAI	GTCTC	4 cut(s)	49, 993, 1677, 3280
BstMWI	GCNNNNNNNGC	9 cut(s)	500, 551, 1028, 1750, 1960, 2169, 2477, 3215, 3234
BstNI	CCWGG	9 cut(s)	17, 406, 445, 920, 1041, 1677, 1971, 2013, 2022
BstNSI	RCATGY	5 cut(s)	1873, 1954, 2369, 2852, 3160
BstPAI	GACNNNNGTC	1 cut(s)	2083
BstSFI	CTRYAG	3 cut(s)	1323, 1594, 3090
BstSLI	GKGCMC	1 cut(s)	1755
BstUI	CGCG	1 cut(s)	986
BstX2I	RGATCY	4 cut(s)	102, 1988, 2069, 2231
BstYI	RGATCY	4 cut(s)	102, 1988, 2069, 2231
Bsu36I	CCTNAGG	2 cut(s)	1152, 1572
BsuI	GTATCC	1 cut(s)	1644
BtgI	CCRYGG	2 cut(s)	48, 1062
BtgZI	GCGATG	1 cut(s)	1003
BtsIMutI	CAGTG	6 cut(s)	24, 205, 521, 2275, 2602, 3138
BveI	ACCTGC	1 cut(s)	1402
Cac8I	GCNNGC	9 cut(s)	81, 91, 1279, 1871, 1952, 2139, 2641, 2828, 3075
CciI	TCATGA	3 cut(s)	2038, 2521, 2680
CfoI	GCGC	3 cut(s)	1283, 1579, 2480
Cfr10I	RCCGGY	2 cut(s)	2378, 2538
CseI	GACGC	4 cut(s)	44, 273, 975, 2433
Csp6I	GTAC	8 cut(s)	395, 738, 974, 1253, 1334, 1377, 2560, 3198
CspAI	ACCGGT	1 cut(s)	2378
CviQI	GTAC	8 cut(s)	395, 738, 974, 1253, 1334, 1377, 2560, 3198
DrdI	GACNNNNNNGTC	1 cut(s)	41
DseDI	GACNNNNNNGTC	1 cut(s)	41
EaeI	YGGCCR	1 cut(s)	2540
Eam1104I	CTCTTC	3 cut(s)	1380, 3158, 3283
EarI	CTCTTC	3 cut(s)	1380, 3158, 3283
Ecl136II	GAGCTC	1 cut(s)	1184
Eco130I	CCWWGG	8 cut(s)	48, 605, 795, 1493, 1964, 2293, 2438, 2514
Eco147I	AGGCCT	1 cut(s)	1969
Eco24I	GRGCYC	4 cut(s)	1047, 1186, 1755, 2288
Eco32I	GATATC	1 cut(s)	997
Eco47I	GGWCC	9 cut(s)	143, 389, 1367, 1859, 2118, 2381, 2435, 2774, 3181
Eco47III	AGCGCT	1 cut(s)	2479
Eco53kI	GAGCTC	1 cut(s)	1184
Eco57I	CTGAAG	2 cut(s)	1404, 1674
Eco81I	CCTNAGG	2 cut(s)	1152, 1572
Eco88I	CYCGRG	1 cut(s)	1232
EcoICRI	GAGCTC	1 cut(s)	1184
EcoNI	CCTNNNNNAGG	3 cut(s)	435, 1785, 2107
EcoO109I	RGGNCCY	3 cut(s)	1752, 1859, 2118
EcoRI	GAATTC	2 cut(s)	696, 1648
EcoRII	CCWGG	9 cut(s)	15, 404, 443, 918, 1039, 1675, 1969, 2011, 2020
EcoRV	GATATC	1 cut(s)	997
EcoT14I	CCWWGG	8 cut(s)	48, 605, 795, 1493, 1964, 2293, 2438, 2514
EcoT22I	ATGCAT	1 cut(s)	1196
EcoT38I	GRGCYC	4 cut(s)	1047, 1186, 1755, 2288
ErhI	CCWWGG	8 cut(s)	48, 605, 795, 1493, 1964, 2293, 2438, 2514
Esp3I	CGTCTC	3 cut(s)	993, 1677, 3280
FalI	AAGNNNNNCTT	2 cut(s)	264, 296
FaqI	GGGAC	3 cut(s)	814, 1640, 2849
FauI	CCCGC	1 cut(s)	2819
FauNDI	CATATG	1 cut(s)	1747
FbaI	TGATCA	1 cut(s)	1933
FblI	GTMKAC	2 cut(s)	866, 1683
FriOI	GRGCYC	4 cut(s)	1047, 1186, 1755, 2288
FspBI	CTAG	9 cut(s)	432, 1023, 1856, 1866, 1922, 2739, 2951, 3011, 3240
GlaI	GCGC	3 cut(s)	1282, 1578, 2479
GsaI	CCCAGC	1 cut(s)	1819
GsuI	CTGGAG	5 cut(s)	434, 1806, 1878, 2094, 2272
HaeII	RGCGCY	1 cut(s)	2481
HapII	CCGG	6 cut(s)	392, 1514, 1763, 2379, 2539, 3266
HgaI	GACGC	4 cut(s)	44, 273, 975, 2433
HhaI	GCGC	3 cut(s)	1283, 1579, 2480
Hin1I	GRCGYC	2 cut(s)	932, 2444
Hin6I	GCGC	3 cut(s)	1281, 1577, 2478
HinP1I	GCGC	3 cut(s)	1281, 1577, 2478
HincII	GTYRAC	1 cut(s)	837
HindII	GTYRAC	1 cut(s)	837
HindIII	AAGCTT	1 cut(s)	1085
HpaI	GTTAAC	1 cut(s)	837
HpaII	CCGG	6 cut(s)	392, 1514, 1763, 2379, 2539, 3266
Hpy166II	GTNNAC	5 cut(s)	210, 837, 867, 1684, 2611
Hpy8I	GTNNAC	5 cut(s)	210, 837, 867, 1684, 2611
HpyCH4IV	ACGT	3 cut(s)	932, 1247, 1670
HpyF10VI	GCNNNNNNNGC	9 cut(s)	500, 551, 1028, 1750, 1960, 2169, 2477, 3215, 3234
HpySE526I	ACGT	3 cut(s)	932, 1247, 1670
Hsp92I	GRCGYC	2 cut(s)	932, 2444
HspAI	GCGC	3 cut(s)	1281, 1577, 2478
Ksp22I	TGATCA	1 cut(s)	1933
KspAI	GTTAAC	1 cut(s)	837
LweI	GCATC	8 cut(s)	114, 252, 775, 1203, 2312, 2557, 2659, 3247
MaeI	CTAG	9 cut(s)	432, 1023, 1856, 1866, 1922, 2739, 2951, 3011, 3240
MaeII	ACGT	3 cut(s)	932, 1247, 1670
MaeIII	GTNAC	5 cut(s)	1035, 1765, 1943, 2551, 2917
MbiI	CCGCTC	2 cut(s)	2826, 3058
MfeI	CAATTG	1 cut(s)	2157
MflI	RGATCY	4 cut(s)	102, 1988, 2069, 2231
MhlI	GDGCHC	7 cut(s)	927, 1047, 1186, 1755, 2288, 2746, 3117
MlyI	GAGTC	4 cut(s)	784, 1417, 1885, 2073
MmeI	TCCRAC	9 cut(s)	80, 91, 205, 457, 509, 1249, 2170, 2752, 3082
Mph1103I	ATGCAT	1 cut(s)	1196
MroXI	GAANNNNTTC	2 cut(s)	275, 2197
MseI	TTAA	8 cut(s)	620, 713, 836, 857, 2277, 2499, 2856, 2972
MslI	CAYNNNNRTG	4 cut(s)	235, 446, 502, 3242
MspA1I	CMGCKG	1 cut(s)	635
MspI	CCGG	6 cut(s)	392, 1514, 1763, 2379, 2539, 3266
MunI	CAATTG	1 cut(s)	2157
Mva1269I	GAATGC	3 cut(s)	222, 904, 2740
MvaI	CCWGG	9 cut(s)	17, 406, 445, 920, 1041, 1677, 1971, 2013, 2022
MvnI	CGCG	1 cut(s)	986
MwoI	GCNNNNNNNGC	9 cut(s)	500, 551, 1028, 1750, 1960, 2169, 2477, 3215, 3234
NciI	CCSGG	1 cut(s)	1515
NcoI	CCATGG	1 cut(s)	48
NdeI	CATATG	1 cut(s)	1747
NlaIV	GGNNCC	7 cut(s)	13, 442, 1368, 1753, 2287, 2377, 3229
NmuCI	GTSAC	3 cut(s)	1765, 1943, 2551
NsiI	ATGCAT	1 cut(s)	1196
NspI	RCATGY	5 cut(s)	1873, 1954, 2369, 2852, 3160
OliI	CACNNNNGTG	1 cut(s)	3242
PaeI	GCATGC	2 cut(s)	1873, 1954
PagI	TCATGA	3 cut(s)	2038, 2521, 2680
PceI	AGGCCT	1 cut(s)	1969
PciI	ACATGT	1 cut(s)	3156
PcsI	WCGNNNNNNNCGW	1 cut(s)	3002
PctI	GAATGC	3 cut(s)	222, 904, 2740
PdmI	GAANNNNTTC	2 cut(s)	275, 2197
PfeI	GAWTC	7 cut(s)	276, 599, 806, 1293, 1341, 1693, 3007
PflFI	GACNNNGTC	1 cut(s)	1077
PflMI	CCANNNNNTGG	1 cut(s)	1970
PfoI	TCCNGGA	1 cut(s)	2011
PinAI	ACCGGT	1 cut(s)	2378
PleI	GAGTC	4 cut(s)	784, 1417, 1885, 2073
PpsI	GAGTC	4 cut(s)	784, 1417, 1885, 2073
PpuMI	RGGWCCY	2 cut(s)	1859, 2118
PscI	ACATGT	1 cut(s)	3156
PshAI	GACNNNNGTC	1 cut(s)	2083
PsiI	TTATAA	1 cut(s)	2250
Psp124BI	GAGCTC	1 cut(s)	1186
Psp5II	RGGWCCY	2 cut(s)	1859, 2118
Psp6I	CCWGG	9 cut(s)	15, 404, 443, 918, 1039, 1675, 1969, 2011, 2020
PspFI	CCCAGC	1 cut(s)	1815
PspGI	CCWGG	9 cut(s)	15, 404, 443, 918, 1039, 1675, 1969, 2011, 2020
PspN4I	GGNNCC	7 cut(s)	13, 442, 1368, 1753, 2287, 2377, 3229
PspOMI	GGGCCC	1 cut(s)	1751
PspPPI	RGGWCCY	2 cut(s)	1859, 2118
PsuI	RGATCY	4 cut(s)	102, 1988, 2069, 2231
PsyI	GACNNNGTC	1 cut(s)	1077
PvuII	CAGCTG	1 cut(s)	635
RsaI	GTAC	8 cut(s)	396, 739, 975, 1254, 1335, 1378, 2561, 3199
RsaNI	GTAC	8 cut(s)	395, 738, 974, 1253, 1334, 1377, 2560, 3198
RseI	CAYNNNNRTG	4 cut(s)	235, 446, 502, 3242
SacI	GAGCTC	1 cut(s)	1186
SaqAI	TTAA	8 cut(s)	620, 713, 836, 857, 2277, 2499, 2856, 2972
ScaI	AGTACT	1 cut(s)	739
SchI	GAGTC	4 cut(s)	784, 1417, 1885, 2073
SduI	GDGCHC	7 cut(s)	927, 1047, 1186, 1755, 2288, 2746, 3117
SfaNI	GCATC	8 cut(s)	114, 252, 775, 1203, 2312, 2557, 2659, 3247
SfcI	CTRYAG	3 cut(s)	1323, 1594, 3090
SinI	GGWCC	9 cut(s)	143, 389, 1367, 1859, 2118, 2381, 2435, 2774, 3181
SmiMI	CAYNNNNRTG	4 cut(s)	235, 446, 502, 3242
SmlI	CTYRAG	3 cut(s)	488, 2937, 3174
SmoI	CTYRAG	3 cut(s)	488, 2937, 3174
SphI	GCATGC	2 cut(s)	1873, 1954
SseBI	AGGCCT	1 cut(s)	1969
SsiI	CCGC	6 cut(s)	1349, 1361, 1736, 2826, 3058, 3184
SspI	AATATT	1 cut(s)	1012
SspMI	CTAG	9 cut(s)	432, 1023, 1856, 1866, 1922, 2739, 2951, 3011, 3240
SstI	GAGCTC	1 cut(s)	1186
StuI	AGGCCT	1 cut(s)	1969
StyI	CCWWGG	8 cut(s)	48, 605, 795, 1493, 1964, 2293, 2438, 2514
TaiI	ACGT	3 cut(s)	935, 1250, 1673
TaqI	TCGA	4 cut(s)	1091, 2929, 3005, 3161
TatI	WGTACW	3 cut(s)	737, 973, 2559
TauI	GCSGC	1 cut(s)	1352
TfiI	GAWTC	7 cut(s)	276, 599, 806, 1293, 1341, 1693, 3007
Tru1I	TTAA	8 cut(s)	620, 713, 836, 857, 2277, 2499, 2856, 2972
Tru9I	TTAA	8 cut(s)	620, 713, 836, 857, 2277, 2499, 2856, 2972
TscAI	CASTG	6 cut(s)	31, 205, 528, 2275, 2602, 3145
TseFI	GTSAC	3 cut(s)	1765, 1943, 2551
Tsp45I	GTSAC	3 cut(s)	1765, 1943, 2551
TspGWI	ACGGA	7 cut(s)	276, 347, 818, 960, 2705, 3011, 3262
TspRI	CASTG	6 cut(s)	31, 205, 528, 2275, 2602, 3145
Tth111I	GACNNNGTC	1 cut(s)	1077
Van91I	CCANNNNNTGG	1 cut(s)	1970
VpaK11BI	GGWCC	9 cut(s)	143, 389, 1367, 1859, 2118, 2381, 2435, 2774, 3181
XagI	CCTNNNNNAGG	3 cut(s)	435, 1785, 2107
XapI	RAATTY	4 cut(s)	696, 853, 1648, 3132
XbaI	TCTAGA	1 cut(s)	3010
XceI	RCATGY	5 cut(s)	1873, 1954, 2369, 2852, 3160
XcmI	CCANNNNNNNNNTGG	1 cut(s)	525
XmiI	GTMKAC	2 cut(s)	866, 1683
XmnI	GAANNNNTTC	2 cut(s)	275, 2197
XspI	CTAG	9 cut(s)	432, 1023, 1856, 1866, 1922, 2739, 2951, 3011, 3240
ZraI	GACGTC	1 cut(s)	933
ZrmI	AGTACT	1 cut(s)	739
Zsp2I	ATGCAT	1 cut(s)	1196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.