MD09G1199900.v1.1

Protein CHUP1, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0009965
Physical Location & Seq
Reverse (-)
18318596 .. 18322687
4092 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1199900.v1.1.491

Sequence Viewer

Length: 1899 bp
ATGATGGTTGGGGGAAGGAACAGGGACATTAAGCCCCTTTTGTTGAAAGTTGGGGTGGCTTTTGCTCTCTCATTTGCCGGATTTCTGTTTTCTCGTCTCAAAACCAGAAAGATGAAGCCCTCCCTGCCTCCACCACGCTCTCCGCGCTCTTCGGATAAAGAAAGTGAAGTTGATTTGGGAGTGAGGCCTCGGCGGAAGGATGACCTTAATGCCACAAGGATATCACACAGTTCATGCAGTTCGGAAAAATATGACGAGATGCACATGCCAAAGGTCTGTAATGTTAATTGCACTTCCAGTGTTTCTCCATGCAGCAAACACGGTGGAGGCAAAGATGGGTTACTCTTACCAGTGTTCAATGAGCTTGTGGAGGAATTTGACTTTGGTGCTGCAAATTCTGGGTTTTCTCCAAGGAAGAATGTCGAAACTTCTAGGTCAGATGCAGAGACTCCCAAAGCATATCGATCAGATATGGATGAATATGAGCAAGAAATCAGACACCTCAGAAACATAGTTAGATCGCTTCGAGAGAGGGAGCGGAGTCTTGAAGTCCAGTTGCTCGAGTACTATGGTCTTAAGGAGCAGGAGACTGCTGTTATGGAGCTCCAAAATCAGTTGAAGATAAACGGTATGGAGGCTAAGCTTTTCTCTCTCAAGATTCAGTCCTTAGAGGCAGATAACCGAAGACTGGAGTCACAAGTGGCCGATCATGCAAAAGTGGTGGCCGAGCTTGAGGCTACTAGGGCAAAAATTAAGATTCTAAAGAAGAAACTCAGATTTGAAGCTGAACAGAACAAAGAACAGATATTAGCTCTGAAGAAAAGAGTAGAGAAGTTTCACGATAGCGAAGCTGCTGATAGTAATTCAGATATTCAATTGAAGTTGAGAAGGATAAAAGATTTGGAGGATGAAGCCGAAGAGTTGAAAAAGTCTAATTTGAAATTGCAACTCGAAAACTCTGAATTGGCACGGAGCCTAGAGTCCACACAAATCCTTGCAAATTCTATCTTGGAAGATCCGGAGGCAGAAGCATTGAAGGAAATGAGTAAGCGTTTAAGACAAGAAAATGATGATTTGACAAAGGAAATTCAGCAACTCCATGTTGATCGGTGTTCTGATGTTGAAGAATTAGTTTACCTCCGGTGGATAAATGCTTGCTTACGCTATGAACTGCGGAATTATCAGCCCCAATCTGGTAAAACGGTGGCAAGGGACTTAAGTAAATCATTAAGCCCAAGATCAGAGGAGAAAGCCAAGCAGCTAATAGTTGAATATGCAAACACTGAAGGATTCGGGGATAAGAGCATTGATTTTGATTCTGAACAATGGTCATCCTCCCAAGCTTCATTTTTCACAGATTCCCCCGAGTTTGATGACTTTTCTGTCGACAATTCATCTGCTACAAAAACCAACACGTCGAGTAAAACCAAATTGTTTAGCAAGCTTAGGAGACTCATACAGGGAAAAGACACTCCTTATCACAACCAGGCTGTGTCAACAGAGAAAACTGGATATGCAGAAGATATCGAGTCTCCATCTCTGTTTTTCAGTTCAAGTAAATCACCAGCAGCTTATGGTGGACAAGAGGGTCAAAGTAACATATTTGCAACTTCGTTTCATATTTCATCAAAAGCTTCTTTAGACCTTCCCAGATGGAGGAGCCCAAAGGAACAGGATACCAAGGATGTACGCAGGGCTCAAAGGCATAGTGATGTGGGAACCCCCTCCGGGTATAAGACCTTCAGCAGGGAAGGTTCTGCGGATTTCCCACTCAAAGATCGATCAGACCAAGACTCAGACTCTACTGAGAAAGCTGAGTTGGTGAAGTATGCAGAAGCTTTGGTAAACTCTCGTGGCACTACCCCGAATGTACACAGAAAATCAGCATCAGCATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

633

Amino Acids

71.5

Weight (kDa)

6.88

Isoelectric Point (pI)

61.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009965)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G52080 AT1G52080
fragaria_vesca FvH4_6g32630
malus_domestica MD09G1199900.v1.1
prunus_persica Prupe.3G056400_v2.0.a1 Prupe.3G056400_v2.0.a1
pyrus_communis pycom09g11710 pycom17g18980
rosa_chinensis RchiOBHm_Chr2g0141111
rosa_laevigata RLG00000019915
rosa_multiflora Rmu_sc0006556.1_g000011
rosa_roxburghii Rroxscaffold_2G00104200
rosa_rugosa Rorug02G0367200 Rorug02G0367300 Rorug02G0367400
rosa_samantha Rh2AG418200 Rh2BG428200 Rh2CG404600 Rh2DG438000
rosa_wichuraiana Rw0G019790 Rw2G034300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1382, 1587
AccBSI CCGCTC 1 cut(s) 538
AccI GTMKAC 1 cut(s) 1386
AccII CGCG 1 cut(s) 145
AccIII TCCGGA 1 cut(s) 1018
AciI CCGC 5 cut(s) 143, 193, 538, 1174, 1760
AclWI GGATC 1 cut(s) 1010
AcoI YGGCCR 2 cut(s) 702, 723
AcsI RAATTY 4 cut(s) 374, 394, 1000, 1086
AcuI CTGAAG 3 cut(s) 836, 1305, 1726
AfaI GTAC 3 cut(s) 566, 1689, 1872
AfiI CCNNNNNNNGG 5 cut(s) 688, 1193, 1656, 1728, 1746
AflII CTTAAG 2 cut(s) 575, 1216
AflIII ACRYGT 1 cut(s) 1413
AjiI CACGTC 1 cut(s) 1416
AjnI CCWGG 1 cut(s) 1485
AjuI GAANNNNNNNTTGG 4 cut(s) 366, 398, 1802, 1834
Alw21I GWGCWC 1 cut(s) 606
Alw26I GTCTC 5 cut(s) 101, 440, 581, 1444, 1536
AlwI GGATC 1 cut(s) 1010
Ama87I CYCGRG 2 cut(s) 560, 1364
Aor13HI TCCGGA 1 cut(s) 1018
AoxI GGCC 3 cut(s) 185, 702, 723
ApeKI GCWGC 5 cut(s) 312, 389, 851, 1258, 1568
ApoI RAATTY 4 cut(s) 374, 394, 1000, 1086
AspLEI GCGC 1 cut(s) 147
AsuC2I CCSGG 1 cut(s) 1729
AsuHPI GGTGA 2 cut(s) 1554, 1834
AvaI CYCGRG 2 cut(s) 560, 1364
BanII GRGCYC 3 cut(s) 606, 1664, 1699
BarI GAAGNNNNNNTAC 2 cut(s) 1724, 1756
BauI CACGAG 1 cut(s) 1851
BbsI GAAGAC 1 cut(s) 691
Bbv12I GWGCWC 1 cut(s) 606
BbvI GCAGC 5 cut(s) 324, 376, 838, 1270, 1580
BccI CCATC 3 cut(s) 329, 1543, 1647
BciT130I CCWGG 1 cut(s) 1487
BciVI GTATCC 1 cut(s) 1669
BcnI CCSGG 1 cut(s) 1729
BcoDI GTCTC 5 cut(s) 101, 440, 581, 1444, 1536
BfaI CTAG 3 cut(s) 432, 741, 977
BfrI CTTAAG 2 cut(s) 575, 1216
BfuI GTATCC 1 cut(s) 1669
BisI GCNGC 5 cut(s) 313, 390, 852, 1259, 1569
BlpI GCTNAGC 1 cut(s) 639
BlsI GCNGC 5 cut(s) 314, 391, 853, 1260, 1570
BmcAI AGTACT 1 cut(s) 566
Bme1390I CCNGG 2 cut(s) 1487, 1729
BmeT110I CYCGRG 2 cut(s) 560, 1364
BmgBI CACGTC 1 cut(s) 1416
BmiI GGNNCC 3 cut(s) 974, 1661, 1720
BmrFI CCNGG 2 cut(s) 1487, 1729
BmsI GCATC 3 cut(s) 249, 430, 1895
BoxI GACNNNNGTC 1 cut(s) 691
BpiI GAAGAC 1 cut(s) 691
BpmI CTGGAG 1 cut(s) 710
Bpu10I CCTNAGC 1 cut(s) 1445
Bpu1102I GCTNAGC 1 cut(s) 639
BpuEI CTTGAG 2 cut(s) 638, 752
BpuMI CCSGG 1 cut(s) 1729
Bsa29I ATCGAT 2 cut(s) 463, 1780
BsaJI CCNNGG 3 cut(s) 188, 410, 1680
BsaWI WCCGGW 2 cut(s) 1018, 1140
Bsc4I CCNNNNNNNGG 5 cut(s) 688, 1193, 1656, 1728, 1746
Bse1I ACTGG 5 cut(s) 297, 350, 553, 693, 1513
BseAI TCCGGA 1 cut(s) 1018
BseBI CCWGG 1 cut(s) 1487
BseCI ATCGAT 2 cut(s) 463, 1780
BseDI CCNNGG 3 cut(s) 188, 410, 1680
BseGI GGATG 5 cut(s) 205, 481, 913, 1331, 1690
BseLI CCNNNNNNNGG 5 cut(s) 688, 1193, 1656, 1728, 1746
BseMII CTCAG 5 cut(s) 517, 787, 1797, 1806, 1809
BseNI ACTGG 5 cut(s) 297, 350, 553, 693, 1513
BseRI GAGGAG 2 cut(s) 1259, 1672
BseXI GCAGC 5 cut(s) 324, 376, 838, 1270, 1580
Bsh1236I CGCG 1 cut(s) 145
BshFI GGCC 3 cut(s) 187, 704, 725
BshVI ATCGAT 2 cut(s) 463, 1780
BsiHKAI GWGCWC 1 cut(s) 606
BsiHKCI CYCGRG 2 cut(s) 560, 1364
BsiSI CCGG 4 cut(s) 78, 1019, 1141, 1728
BslFI GGGAC 2 cut(s) 38, 1226
BslI CCNNNNNNNGG 5 cut(s) 688, 1193, 1656, 1728, 1746
BsmAI GTCTC 5 cut(s) 101, 440, 581, 1444, 1536
BsmBI CGTCTC 1 cut(s) 101
BsmFI GGGAC 2 cut(s) 38, 1226
BsnI GGCC 3 cut(s) 187, 704, 725
BsoBI CYCGRG 2 cut(s) 560, 1364
Bsp1286I GDGCHC 3 cut(s) 606, 1664, 1699
Bsp13I TCCGGA 1 cut(s) 1018
Bsp1407I TGTACA 1 cut(s) 1870
Bsp143I GATC 8 cut(s) 464, 518, 706, 1015, 1105, 1238, 1777, 1781
Bsp1720I GCTNAGC 1 cut(s) 639
BspACI CCGC 5 cut(s) 143, 193, 538, 1174, 1760
BspANI GGCC 3 cut(s) 187, 704, 725
BspCNI CTCAG 5 cut(s) 516, 786, 1798, 1807, 1808
BspDI ATCGAT 2 cut(s) 463, 1780
BspEI TCCGGA 1 cut(s) 1018
BspFNI CGCG 1 cut(s) 145
BspLI GGNNCC 3 cut(s) 974, 1661, 1720
BspPI GGATC 1 cut(s) 1010
BspQI GCTCTTC 1 cut(s) 154
BspTI CTTAAG 2 cut(s) 575, 1216
BsrBI CCGCTC 1 cut(s) 538
BsrGI TGTACA 1 cut(s) 1870
BsrI ACTGG 5 cut(s) 297, 350, 553, 693, 1513
BssECI CCNNGG 3 cut(s) 188, 410, 1680
BssMI GATC 8 cut(s) 464, 518, 706, 1015, 1105, 1238, 1777, 1781
BssSI CACGAG 1 cut(s) 1851
BssT1I CCWWGG 2 cut(s) 410, 1680
Bst2BI CACGAG 1 cut(s) 1851
Bst2UI CCWGG 1 cut(s) 1487
Bst4CI ACNGT 4 cut(s) 230, 323, 629, 1204
Bst6I CTCTTC 2 cut(s) 154, 912
BstAFI CTTAAG 2 cut(s) 575, 1216
BstAUI TGTACA 1 cut(s) 1870
BstC8I GCNNGC 2 cut(s) 1156, 1442
BstDEI CTNAG 9 cut(s) 503, 639, 667, 773, 1445, 1795, 1806, 1815, 1896
BstENI CCTNNNNNAGG 1 cut(s) 1744
BstF5I GGATG 5 cut(s) 205, 481, 913, 1331, 1690
BstFNI CGCG 1 cut(s) 145
BstHHI GCGC 1 cut(s) 147
BstKTI GATC 8 cut(s) 467, 521, 709, 1018, 1108, 1241, 1780, 1784
BstMAI GTCTC 5 cut(s) 101, 440, 581, 1444, 1536
BstMBI GATC 8 cut(s) 464, 518, 706, 1015, 1105, 1238, 1777, 1781
BstMWI GCNNNNNNNGC 4 cut(s) 124, 144, 710, 743
BstNI CCWGG 1 cut(s) 1487
BstNSI RCATGY 1 cut(s) 268
BstPAI GACNNNNGTC 1 cut(s) 691
BstSCI CCNGG 2 cut(s) 1485, 1727
BstUI CGCG 1 cut(s) 145
BstV1I GCAGC 5 cut(s) 324, 376, 838, 1270, 1580
BstV2I GAAGAC 1 cut(s) 691
BstX2I RGATCY 1 cut(s) 1015
BstYI RGATCY 1 cut(s) 1015
Bsu15I ATCGAT 2 cut(s) 463, 1780
BsuI GTATCC 1 cut(s) 1669
BsuRI GGCC 3 cut(s) 187, 704, 725
BsuTUI ATCGAT 2 cut(s) 463, 1780
BtrI CACGTC 1 cut(s) 1416
BtsCI GGATG 5 cut(s) 205, 481, 913, 1331, 1690
BtsIMutI CAGTG 3 cut(s) 304, 357, 1281
Cac8I GCNNGC 2 cut(s) 1156, 1442
CfoI GCGC 1 cut(s) 147
ClaI ATCGAT 2 cut(s) 463, 1780
Csp6I GTAC 3 cut(s) 565, 1688, 1871
CspCI CAANNNNNGTGG 4 cut(s) 304, 339, 702, 737
CviAII CATG 5 cut(s) 234, 265, 309, 710, 1100
CviQI GTAC 3 cut(s) 565, 1688, 1871
DdeI CTNAG 9 cut(s) 503, 639, 667, 773, 1445, 1795, 1806, 1815, 1896
DpnI GATC 8 cut(s) 466, 520, 708, 1017, 1107, 1240, 1779, 1783
DpnII GATC 8 cut(s) 464, 518, 706, 1015, 1105, 1238, 1777, 1781
DrdI GACNNNNNNGTC 2 cut(s) 1382, 1587
DseDI GACNNNNNNGTC 2 cut(s) 1382, 1587
EaeI YGGCCR 2 cut(s) 702, 723
Eam1104I CTCTTC 2 cut(s) 154, 912
EarI CTCTTC 2 cut(s) 154, 912
EciI GGCGGA 1 cut(s) 208
Ecl136II GAGCTC 1 cut(s) 604
Eco130I CCWWGG 2 cut(s) 410, 1680
Eco147I AGGCCT 1 cut(s) 187
Eco24I GRGCYC 3 cut(s) 606, 1664, 1699
Eco32I GATATC 2 cut(s) 222, 1525
Eco53kI GAGCTC 1 cut(s) 604
Eco57I CTGAAG 3 cut(s) 836, 1305, 1726
Eco88I CYCGRG 2 cut(s) 560, 1364
EcoICRI GAGCTC 1 cut(s) 604
EcoNI CCTNNNNNAGG 1 cut(s) 1744
EcoRII CCWGG 1 cut(s) 1485
EcoRV GATATC 2 cut(s) 222, 1525
EcoT14I CCWWGG 2 cut(s) 410, 1680
EcoT38I GRGCYC 3 cut(s) 606, 1664, 1699
ErhI CCWWGG 2 cut(s) 410, 1680
Esp3I CGTCTC 1 cut(s) 101
FaeI CATG 5 cut(s) 237, 268, 312, 713, 1103
FaqI GGGAC 2 cut(s) 38, 1226
FatI CATG 5 cut(s) 233, 264, 308, 709, 1099
FblI GTMKAC 1 cut(s) 1386
Fnu4HI GCNGC 5 cut(s) 313, 390, 852, 1259, 1569
FokI GGATG 5 cut(s) 212, 488, 920, 1318, 1697
FriOI GRGCYC 3 cut(s) 606, 1664, 1699
Fsp4HI GCNGC 5 cut(s) 313, 390, 852, 1259, 1569
FspBI CTAG 3 cut(s) 432, 741, 977
GlaI GCGC 1 cut(s) 146
GluI GCNGC 5 cut(s) 313, 390, 852, 1259, 1569
GsuI CTGGAG 1 cut(s) 710
HaeIII GGCC 3 cut(s) 187, 704, 725
HapII CCGG 4 cut(s) 78, 1019, 1141, 1728
HhaI GCGC 1 cut(s) 147
Hin1II CATG 5 cut(s) 237, 268, 312, 713, 1103
Hin6I GCGC 1 cut(s) 145
HinP1I GCGC 1 cut(s) 145
HincII GTYRAC 2 cut(s) 1387, 1497
HindII GTYRAC 2 cut(s) 1387, 1497
HindIII AAGCTT 5 cut(s) 641, 1341, 1442, 1632, 1836
HpaII CCGG 4 cut(s) 78, 1019, 1141, 1728
HphI GGTGA 2 cut(s) 1554, 1834
Hpy166II GTNNAC 7 cut(s) 984, 1135, 1387, 1497, 1580, 1846, 1873
Hpy188III TCNNGA 5 cut(s) 527, 545, 655, 839, 1019
Hpy8I GTNNAC 7 cut(s) 984, 1135, 1387, 1497, 1580, 1846, 1873
Hpy99I CGWCG 1 cut(s) 1420
HpyAV CCTTC 8 cut(s) 9, 190, 882, 1030, 1280, 1655, 1745, 1750
HpyCH4III ACNGT 4 cut(s) 230, 323, 629, 1204
HpyCH4IV ACGT 1 cut(s) 1415
HpyF10VI GCNNNNNNNGC 4 cut(s) 124, 144, 710, 743
HpyF3I CTNAG 9 cut(s) 503, 639, 667, 773, 1445, 1795, 1806, 1815, 1896
HpySE526I ACGT 1 cut(s) 1415
Hsp92II CATG 5 cut(s) 237, 268, 312, 713, 1103
HspAI GCGC 1 cut(s) 145
Kpn2I TCCGGA 1 cut(s) 1018
Kzo9I GATC 8 cut(s) 464, 518, 706, 1015, 1105, 1238, 1777, 1781
LguI GCTCTTC 1 cut(s) 154
LmnI GCTCC 6 cut(s) 535, 580, 601, 609, 972, 1659
Lsp1109I GCAGC 5 cut(s) 324, 376, 838, 1270, 1580
LweI GCATC 3 cut(s) 249, 430, 1895
MaeI CTAG 3 cut(s) 432, 741, 977
MaeII ACGT 1 cut(s) 1415
MaeIII GTNAC 3 cut(s) 339, 693, 1595
MalI GATC 8 cut(s) 466, 520, 708, 1017, 1107, 1240, 1779, 1783
MbiI CCGCTC 1 cut(s) 538
MboI GATC 8 cut(s) 464, 518, 706, 1015, 1105, 1238, 1777, 1781
MfeI CAATTG 1 cut(s) 875
MflI RGATCY 1 cut(s) 1015
MhlI GDGCHC 3 cut(s) 606, 1664, 1699
MlyI GAGTC 8 cut(s) 442, 550, 701, 989, 1446, 1538, 1787, 1793
MroI TCCGGA 1 cut(s) 1018
MseI TTAA 8 cut(s) 30, 207, 285, 576, 753, 1055, 1217, 1229
MslI CAYNNNNRTG 1 cut(s) 1710
MspCI CTTAAG 2 cut(s) 575, 1216
MspI CCGG 4 cut(s) 78, 1019, 1141, 1728
MspR9I CCNGG 2 cut(s) 1487, 1729
MunI CAATTG 1 cut(s) 875
MvaI CCWGG 1 cut(s) 1487
MvnI CGCG 1 cut(s) 145
MwoI GCNNNNNNNGC 4 cut(s) 124, 144, 710, 743
NciI CCSGG 1 cut(s) 1729
NdeII GATC 8 cut(s) 464, 518, 706, 1015, 1105, 1238, 1777, 1781
NlaIII CATG 5 cut(s) 237, 268, 312, 713, 1103
NlaIV GGNNCC 3 cut(s) 974, 1661, 1720
NmeAIII GCCGAG 2 cut(s) 169, 751
NmuCI GTSAC 1 cut(s) 693
NspI RCATGY 1 cut(s) 268
PaeR7I CTCGAG 1 cut(s) 560
PceI AGGCCT 1 cut(s) 187
PciSI GCTCTTC 1 cut(s) 154
PfeI GAWTC 5 cut(s) 658, 757, 1290, 1316, 1358
PkrI GCNGC 5 cut(s) 314, 391, 853, 1260, 1570
PleI GAGTC 8 cut(s) 442, 549, 700, 988, 1446, 1537, 1787, 1793
PpsI GAGTC 8 cut(s) 442, 549, 700, 988, 1446, 1537, 1787, 1793
PshAI GACNNNNGTC 1 cut(s) 691
Psp124BI GAGCTC 1 cut(s) 606
Psp6I CCWGG 1 cut(s) 1485
PspGI CCWGG 1 cut(s) 1485
PspN4I GGNNCC 3 cut(s) 974, 1661, 1720
PspXI VCTCGAGB 1 cut(s) 560
PsuI RGATCY 1 cut(s) 1015
RsaI GTAC 3 cut(s) 566, 1689, 1872
RsaNI GTAC 3 cut(s) 565, 1688, 1871
RseI CAYNNNNRTG 1 cut(s) 1710
SacI GAGCTC 1 cut(s) 606
SalI GTCGAC 1 cut(s) 1385
SapI GCTCTTC 1 cut(s) 154
SaqAI TTAA 8 cut(s) 30, 207, 285, 576, 753, 1055, 1217, 1229
SatI GCNGC 5 cut(s) 313, 390, 852, 1259, 1569
Sau3AI GATC 8 cut(s) 464, 518, 706, 1015, 1105, 1238, 1777, 1781
ScaI AGTACT 1 cut(s) 566
SchI GAGTC 8 cut(s) 442, 550, 701, 989, 1446, 1538, 1787, 1793
ScrFI CCNGG 2 cut(s) 1487, 1729
SduI GDGCHC 3 cut(s) 606, 1664, 1699
SfaNI GCATC 3 cut(s) 249, 430, 1895
Sfr274I CTCGAG 1 cut(s) 560
SlaI CTCGAG 1 cut(s) 560
SmiMI CAYNNNNRTG 1 cut(s) 1710
SmlI CTYRAG 5 cut(s) 560, 575, 653, 731, 1216
SmoI CTYRAG 5 cut(s) 560, 575, 653, 731, 1216
SseBI AGGCCT 1 cut(s) 187
SsiI CCGC 5 cut(s) 143, 193, 538, 1174, 1760
SspMI CTAG 3 cut(s) 432, 741, 977
SstI GAGCTC 1 cut(s) 606
StuI AGGCCT 1 cut(s) 187
StyD4I CCNGG 2 cut(s) 1485, 1727
StyI CCWWGG 2 cut(s) 410, 1680
TaaI ACNGT 4 cut(s) 230, 323, 629, 1204
TaiI ACGT 1 cut(s) 1418
TaqI TCGA 9 cut(s) 423, 463, 526, 561, 951, 1386, 1418, 1527, 1780
TatI WGTACW 2 cut(s) 564, 1870
TfiI GAWTC 5 cut(s) 658, 757, 1290, 1316, 1358
Tru1I TTAA 8 cut(s) 30, 207, 285, 576, 753, 1055, 1217, 1229
Tru9I TTAA 8 cut(s) 30, 207, 285, 576, 753, 1055, 1217, 1229
TscAI CASTG 3 cut(s) 304, 357, 1288
TseFI GTSAC 1 cut(s) 693
TseI GCWGC 5 cut(s) 312, 389, 851, 1258, 1568
Tsp45I GTSAC 1 cut(s) 693
TspDTI ATGAA 9 cut(s) 128, 222, 492, 924, 1182, 1335, 1383, 1607, 1614
TspGWI ACGGA 1 cut(s) 985
TspRI CASTG 3 cut(s) 304, 357, 1288
Vha464I CTTAAG 2 cut(s) 575, 1216
XagI CCTNNNNNAGG 1 cut(s) 1744
XapI RAATTY 4 cut(s) 374, 394, 1000, 1086
XceI RCATGY 1 cut(s) 268
XhoI CTCGAG 1 cut(s) 560
XmiI GTMKAC 1 cut(s) 1386
XspI CTAG 3 cut(s) 432, 741, 977
ZrmI AGTACT 1 cut(s) 566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.